메뉴 건너뛰기




Volumn 10, Issue 8, 2015, Pages

Large-scale transcriptome analysis in faba bean (vicia faba L.) under ascochyta fabae infection

Author keywords

[No Author keywords available]

Indexed keywords

ALDEHYDE DEHYDROGENASE; ALDEHYDE DEHYDROGENASE 7A; CALMODULIN; TRANSCRIPTOME; UNCLASSIFIED DRUG; LEUCINE-RICH REPEAT PROTEINS; PROTEIN;

EID: 84942907012     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0135143     Document Type: Article
Times cited : (43)

References (75)
  • 1
    • 84942925426 scopus 로고
    • Utilization of wild relatives and primitive forms of food legumes
    • Witcombe JRaE, W., editor: Martinus Nijhoff/DrWJunk Publishers;
    • Cubero JI. Utilization of wild relatives and primitive forms of food legumes. Witcombe JRaE, W., editor. The Hague, The Netherlands and ICARDA: Martinus Nijhoff/DrWJunk Publishers; 1984.
    • (1984) The Hague, the Netherlands and ICARDA
    • Cubero, J.I.1
  • 2
    • 0000888212 scopus 로고
    • Cytotaxonomic studies of Eastern Mediterranean Vicia species (Leguminosae
    • Maxted N, Callimassia MA, Bennett MD. Cytotaxonomic studies of Eastern Mediterranean Vicia species (Leguminosae). Pl Syst Evol. 1991; 177(3-4):221-34.
    • (1991) Pl Syst Evol , vol.177 , Issue.3-4 , pp. 221-234
    • Maxted, N.1    Callimassia, M.A.2    Bennett, M.D.3
  • 3
    • 0028873712 scopus 로고
    • Nuclear DNA amounts in angiosperms
    • Bennett MD, Leitch IJ. Nuclear DNA Amounts in Angiosperms. Ann Bot. 1995; 76(2):113-76.
    • (1995) Ann Bot , vol.76 , Issue.2 , pp. 113-176
    • Bennett, M.D.1    Leitch, I.J.2
  • 4
    • 0016351896 scopus 로고
    • Genome size and the proportion of repeated nucleotide sequence DNA in plants
    • PMID: 4441361
    • Flavell RB, Bennett MD, Smith JB, Smith DB. Genome size and the proportion of repeated nucleotide sequence DNA in plants. Biochem Genet. 1974; 12(4):257-69. PMID: 4441361
    • (1974) Biochem Genet , vol.12 , Issue.4 , pp. 257-269
    • Flavell, R.B.1    Bennett, M.D.2    Smith, J.B.3    Smith, D.B.4
  • 7
    • 84891349679 scopus 로고    scopus 로고
    • A reference consensus genetic map for molecular markers and economically important traits in faba bean (Vicia faba L.)
    • Satovic Z, Avila C, Cruz-Izquierdo S, Diaz-Ruiz R, Garcia-Ruiz G, Palomino C, et al. A reference consensus genetic map for molecular markers and economically important traits in faba bean (Vicia faba L.). BMC Genomics. 2013; 14(1):932.
    • (2013) BMC Genomics , vol.14 , Issue.1 , pp. 932
    • Satovic, Z.1    Avila, C.2    Cruz-Izquierdo, S.3    Diaz-Ruiz, R.4    Garcia-Ruiz, G.5    Palomino, C.6
  • 8
    • 84881374407 scopus 로고    scopus 로고
    • Genetic linkage map of Chinese native variety faba bean (Vicia faba L.) based on simple sequence repeat markers
    • Ma Y, Bao S-y, Yang T, Hu J-g, Guan J-p, He Y-h, et al. Genetic linkage map of Chinese native variety faba bean (Vicia faba L.) based on simple sequence repeat markers. Plant Breeding. 2013; 132 (4):397-400.
    • (2013) Plant Breeding , vol.132 , Issue.4 , pp. 397-400
    • Ma, Y.1    Bao, S.-Y.2    Yang, T.3    Hu, J.-G.4    Guan, J.-P.5    He, Y.-H.6
  • 9
    • 84919928198 scopus 로고    scopus 로고
    • Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.)
    • PMID: 25186169
    • Khazaei H, O'Sullivan D, Sillanpää M, Stoddard F. Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.). Theor Appl Genet. 2014; 127(11):2371-85. doi: 10.1007/s00122-014-2383-y PMID: 25186169
    • (2014) Theor Appl Genet , vol.127 , Issue.11 , pp. 2371-2385
    • Khazaei, H.1    O'Sullivan, D.2    Sillanpää, M.3    Stoddard, F.4
  • 10
    • 77950122188 scopus 로고    scopus 로고
    • Validation of QTLs for Orobanche crenata resistance in faba bean (Vicia faba L.) across environments and generations
    • PMID: 19956921
    • Díaz-Ruiz R, Torres AM, Satovic Z, Gutierrez MV, Cubero JI, Román B. Validation of QTLs for Orobanche crenata resistance in faba bean (Vicia faba L.) across environments and generations. Theor Appl Genet. 2010; 120(5):909-19. doi: 10.1007/s00122-009-1220-1 PMID: 19956921
    • (2010) Theor Appl Genet , vol.120 , Issue.5 , pp. 909-919
    • Díaz-Ruiz, R.1    Torres, A.M.2    Satovic, Z.3    Gutierrez, M.V.4    Cubero, J.I.5    Román, B.6
  • 11
    • 84888000500 scopus 로고    scopus 로고
    • QTLs for Orobanche spp. Resistance in faba bean: Identification and validation across different environments
    • Gutiérrez N, Palomino C, Satovic Z, Ruiz-Rodríguez MD, Vitale S, Gutiérrez MV, et al. QTLs for Orobanche spp. resistance in faba bean: identification and validation across different environments. Mol Breed. 2013; 32(4):909-22.
    • (2013) Mol Breed , vol.32 , Issue.4 , pp. 909-922
    • Gutiérrez, N.1    Palomino, C.2    Satovic, Z.3    Ruiz-Rodríguez, M.D.4    Vitale, S.5    Gutiérrez, M.V.6
  • 12
    • 0141476585 scopus 로고    scopus 로고
    • Mapping of quantitative trait loci controlling broomrape (Orobanche crenata Forsk.) resistance in faba bean (Vicia faba L.)
    • PMID: 12502250
    • Román B, Torres AM, Rubiales D, Cubero JI, Satovic Z. Mapping of quantitative trait loci controlling broomrape (Orobanche crenata Forsk.) resistance in faba bean (Vicia faba L.). Genome. 2002; 45 (6):1057-63. PMID: 12502250
    • (2002) Genome , vol.45 , Issue.6 , pp. 1057-1063
    • Román, B.1    Torres, A.M.2    Rubiales, D.3    Cubero, J.I.4    Satovic, Z.5
  • 13
    • 2142674338 scopus 로고    scopus 로고
    • Isolate and organ-specific QTLs for ascochyta blight resistance in faba bean (Vicia faba L
    • PMID: 15067393
    • Avila CM, Satovic Z, Sillero JC, Rubiales D, Moreno MT, Torres AM. Isolate and organ-specific QTLs for ascochyta blight resistance in faba bean (Vicia faba L). Theor Appl Genet. 2004; 108(6):1071-8. PMID: 15067393
    • (2004) Theor Appl Genet , vol.108 , Issue.6 , pp. 1071-1078
    • Avila, C.M.1    Satovic, Z.2    Sillero, J.C.3    Rubiales, D.4    Moreno, M.T.5    Torres, A.M.6
  • 14
    • 0042206747 scopus 로고    scopus 로고
    • Identification of RAPD markers linked to the Uvf-1 gene conferring hypersensitive resistance against rust (Uromyces viciae-fabae) in Vicia faba L
    • PMID: 12698251
    • Avila CM, Sillero JC, Rubiales D, Moreno MT, Torres AM. Identification of RAPD markers linked to the Uvf-1 gene conferring hypersensitive resistance against rust (Uromyces viciae-fabae) in Vicia faba L. Theor Appl Genet. 2003; 107(2):353-8. PMID: 12698251
    • (2003) Theor Appl Genet , vol.107 , Issue.2 , pp. 353-358
    • Avila, C.M.1    Sillero, J.C.2    Rubiales, D.3    Moreno, M.T.4    Torres, A.M.5
  • 15
    • 65349173700 scopus 로고    scopus 로고
    • Confirmation of QTLs controlling Ascochyta fabae resistance in different generations of faba bean (Vicia faba L.)
    • Díaz-Ruiz R, Satovic Z, Ávila CM, Alfaro CM, Gutierrez MV, Torres AM, et al. Confirmation of QTLs controlling Ascochyta fabae resistance in different generations of faba bean (Vicia faba L.). Crop Pasture Sci. 2009; 60(4):353-61.
    • (2009) Crop Pasture Sci , vol.60 , Issue.4 , pp. 353-361
    • Díaz-Ruiz, R.1    Satovic, Z.2    Ávila, C.M.3    Alfaro, C.M.4    Gutierrez, M.V.5    Torres, A.M.6
  • 16
    • 84890881437 scopus 로고    scopus 로고
    • SNP discovery and high-density genetic mapping in faba bean (Vicia faba L.) permits identification of QTLs for ascochyta blight resistance
    • PMID: 24467895
    • Kaur S, Kimber RBE, Cogan NOI, Materne M, Forster JW, Paull JG. SNP discovery and high-density genetic mapping in faba bean (Vicia faba L.) permits identification of QTLs for ascochyta blight resistance. Plant Sci. 2014; 217-218(0):47-55. doi: 10.1016/j.plantsci.2013.11.014 PMID: 24467895
    • (2014) Plant Sci , vol.217-218 , pp. 47-55
    • Kaur, S.1    Kimber, R.B.E.2    Cogan, N.O.I.3    Materne, M.4    Forster, J.W.5    Paull, J.G.6
  • 18
    • 84869091961 scopus 로고    scopus 로고
    • Comparative genomics to bridge Vicia faba with model and closely-related legume species: Stability of QTLs for flowering and yield-related traits
    • PMID: 22864387
    • Cruz-Izquierdo S, Avila CM, Satovic Z, Palomino C, Gutierrez N, Ellwood SR, et al. Comparative genomics to bridge Vicia faba with model and closely-related legume species: stability of QTLs for flowering and yield-related traits. Theor Appl Genet. 2012; 125(8):1767-82. doi: 10.1007/s00122-012-1952-1 PMID: 22864387
    • (2012) Theor Appl Genet , vol.125 , Issue.8 , pp. 1767-1782
    • Cruz-Izquierdo, S.1    Avila, C.M.2    Satovic, Z.3    Palomino, C.4    Gutierrez, N.5    Ellwood, S.R.6
  • 19
    • 79957887475 scopus 로고    scopus 로고
    • Towards marker-assisted selection in pulses: A review
    • Kumar J, Choudhary AK, Solanki RK, Pratap A. Towards marker-assisted selection in pulses: a review. Plant Breed. 2011; 130(3):297-313.
    • (2011) Plant Breed , vol.130 , Issue.3 , pp. 297-313
    • Kumar, J.1    Choudhary, A.K.2    Solanki, R.K.3    Pratap, A.4
  • 20
    • 67349257945 scopus 로고    scopus 로고
    • Challenges for effective marker-assisted selection in plants
    • PMID: 18695989
    • Hospital F. Challenges for effective marker-assisted selection in plants. Genetica. 2009; 136(2):303-10. doi: 10.1007/s10709-008-9307-1 PMID: 18695989
    • (2009) Genetica , vol.136 , Issue.2 , pp. 303-310
    • Hospital, F.1
  • 21
    • 84862805198 scopus 로고    scopus 로고
    • Characterization and genetic analysis of an EIN4-like sequence (CaETR-1) located in QTLAR1 implicated in ascochyta blight resistance in chickpea
    • PMID: 22238063
    • Madrid E, Rajesh PN, Rubio J, Gil J, Millán T, Chen W. Characterization and genetic analysis of an EIN4-like sequence (CaETR-1) located in QTLAR1 implicated in ascochyta blight resistance in chickpea. Plant Cell Rep. 2012; 31(6):1033-42. doi: 10.1007/s00299-011-1221-9 PMID: 22238063
    • (2012) Plant Cell Rep , vol.31 , Issue.6 , pp. 1033-1042
    • Madrid, E.1    Rajesh, P.N.2    Rubio, J.3    Gil, J.4    Millán, T.5    Chen, W.6
  • 22
    • 37749031255 scopus 로고    scopus 로고
    • Next-generation sequencing transforms today's biology
    • Schuster SC. Next-generation sequencing transforms today's biology. Nat Meth. 2008; 5(1):16-8.
    • (2008) Nat Meth , vol.5 , Issue.1 , pp. 16-18
    • Schuster, S.C.1
  • 23
    • 84858410963 scopus 로고    scopus 로고
    • Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers
    • Kaur S, Pembleton L, Cogan N, Savin K, Leonforte T, Paull J, et al. Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers. BMC Genomics. 2012; 13 (1):104.
    • (2012) BMC Genomics , vol.13 , Issue.1 , pp. 104
    • Kaur, S.1    Pembleton, L.2    Cogan, N.3    Savin, K.4    Leonforte, T.5    Paull, J.6
  • 24
    • 84868493560 scopus 로고    scopus 로고
    • High-throughput novel microsatellite marker of faba bean via next generation sequencing
    • Yang T, Bao S-y, Ford R, Jia T-j, Guan J-p, He Y-h, et al. High-throughput novel microsatellite marker of faba bean via next generation sequencing. BMC Genomics. 2012; 13(1):602.
    • (2012) BMC Genomics , vol.13 , Issue.1 , pp. 602
    • Yang, T.1    Bao, S.-Y.2    Ford, R.3    Jia, T.-J.4    Guan, J.-P.5    He, Y.-H.6
  • 25
    • 84869501809 scopus 로고    scopus 로고
    • Heterozygosity and diversity analysis using mapped single nucelotide polymorphisms in a faba bean inbreeding programme
    • Cottage A, Gostkiewicz K, Thomas JE, Borrows R, Torres AM, O'Sullivan DM. Heterozygosity and diversity analysis using mapped single nucelotide polymorphisms in a faba bean inbreeding programme. Mol Breed. 2012; 30(4):1799-809.
    • (2012) Mol Breed , vol.30 , Issue.4 , pp. 1799-1809
    • Cottage, A.1    Gostkiewicz, K.2    Thomas, J.E.3    Borrows, R.4    Torres, A.M.5    O'Sullivan, D.M.6
  • 26
    • 84887989292 scopus 로고    scopus 로고
    • Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics
    • PMID: 23313999
    • Varshney RK, Mohan SM, Gaur PM, Gangarao NVPR, Pandey MK, Bohra A, et al. Achievements and prospects of genomics-assisted breeding in three legume crops of the semi-arid tropics. Biotechnol Adv. 2013; 31(8):1120-34. doi: 10.1016/j.biotechadv.2013.01.001 PMID: 23313999
    • (2013) Biotechnol Adv , vol.31 , Issue.8 , pp. 1120-1134
    • Varshney, R.K.1    Mohan, S.M.2    Gaur, P.M.3    Gangarao, N.V.P.R.4    Pandey, M.K.5    Bohra, A.6
  • 27
    • 84942929787 scopus 로고    scopus 로고
    • A study of the performance of certain faba bean genotypes in relation to Botrytis fabae and Ascochyta fabae in France
    • Tivoli B, Berthelem P, Le Guen J, Onfroy C. A study of the performance of certain faba bean genotypes in relation to Botrytis fabae and Ascochyta fabae in France. FABIS Newsletter 1998; 21:36:9.
    • (1998) FABIS Newsletter , vol.21 , Issue.36 , pp. 9
    • Tivoli, B.1    Berthelem, P.2    Le Guen, J.3    Onfroy, C.4
  • 28
    • 0027019712 scopus 로고
    • Variation in the resistance of Vicia faba to Ascochyta fabae in relation to disease development in field trials
    • Maurin N, Tivoli B. Variation in the resistance of Vicia faba to Ascochyta fabae in relation to disease development in field trials. Plant Pathol. 1992; 41(6):737-44.
    • (1992) Plant Pathol , vol.41 , Issue.6 , pp. 737-744
    • Maurin, N.1    Tivoli, B.2
  • 30
    • 0035693859 scopus 로고    scopus 로고
    • Identification of resistance to Ascochyta fabae in Vicia faba germplasm
    • Sillero JC, Avila CM, Moreno MT, Rubiales D. Identification of resistance to Ascochyta fabae in Vicia faba germplasm. Plant Breeding. 2001; 120(6):529-31.
    • (2001) Plant Breeding , vol.120 , Issue.6 , pp. 529-531
    • Sillero, J.C.1    Avila, C.M.2    Moreno, M.T.3    Rubiales, D.4
  • 31
    • 84878029404 scopus 로고    scopus 로고
    • DeepSuperSage analysis of the Vicia faba transcriptome in response to Ascochyta fabae infection
    • Madrid E, Palomino C, Plötner A, Horres R, Rotter B, Winter P, et al. DeepSuperSage analysis of the Vicia faba transcriptome in response to Ascochyta fabae infection. Phytopatol Mediterranea. 2013; 52 (1):166-82.
    • (2013) Phytopatol Mediterranea , vol.52 , Issue.1 , pp. 166-182
    • Madrid, E.1    Palomino, C.2    Plötner, A.3    Horres, R.4    Rotter, B.5    Winter, P.6
  • 33
    • 84985450025 scopus 로고
    • A comparison of infection of resistant and susceptible lines of field bean (Vicia faba) by Ascochyta fabae
    • Pritchard PR, Rowe PS, Rossall S. A comparison of infection of resistant and susceptible lines of field bean (Vicia faba) by Ascochyta fabae. Plant Pathol. 1989; 38(2):266-70.
    • (1989) Plant Pathol , vol.38 , Issue.2 , pp. 266-270
    • Pritchard, P.R.1    Rowe, P.S.2    Rossall, S.3
  • 35
    • 39449121572 scopus 로고    scopus 로고
    • Normalization of full-length enriched cDNA
    • PMID: 18437263
    • Bogdanova EA, Shagin DA, Lukyanov SA. Normalization of full-length enriched cDNA. Mol BioSyst. 2008; 4(3):205-12. doi: 10.1039/b715110c PMID: 18437263
    • (2008) Mol BioSyst , vol.4 , Issue.3 , pp. 205-212
    • Bogdanova, E.A.1    Shagin, D.A.2    Lukyanov, S.A.3
  • 36
    • 84942915912 scopus 로고    scopus 로고
    • AutoFlow a Versatile Workflow Engine Illustrated by Assembling an Optimised de novo Transcriptome for a Non-Model Species such as Faba Bean (Vicia faba
    • in press
    • Seoane P, Ocaña S, Carmona R, Bautista R, Madrid E, Torres A, et al. AutoFlow, a Versatile Workflow Engine Illustrated by Assembling an Optimised de novo Transcriptome for a Non-Model Species, such as Faba Bean (Vicia faba). Curr Bioinfo J. 20015:in press.
    • (2001) Curr Bioinfo J
    • Seoane, P.1    Ocaña, S.2    Carmona, R.3    Bautista, R.4    Madrid, E.5    Torres, A.6
  • 38
    • 77954299992 scopus 로고    scopus 로고
    • AgriGO: A GO analysis toolkit for the agricultural community
    • Du Z, Zhou X, Ling Y, Zhang Z, Su Z. agriGO: a GO analysis toolkit for the agricultural community. Nucleic Acids Res. 2010; 38(suppl 2):W64-W70.
    • (2010) Nucleic Acids Res , vol.38 , pp. W64-W70
    • Du, Z.1    Zhou, X.2    Ling, Y.3    Zhang, Z.4    Su, Z.5
  • 40
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • PMID: 19505943
    • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009; 25(16):2078-9. doi: 10.1093/bioinformatics/btp352 PMID: 19505943
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3    Fennell, T.4    Ruan, J.5    Homer, N.6
  • 41
    • 84864483625 scopus 로고    scopus 로고
    • RobiNA: A user-friendly, integrated software solution for RNA-Seq-based transcriptomics
    • Lohse M, Bolger AM, Nagel A, Fernie AR, Lunn JE, Stitt M, et al. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 2012; 40(W1):W622-W7.
    • (2012) Nucleic Acids Res , vol.40 , Issue.W1 , pp. W622-W627
    • Lohse, M.1    Bolger, A.M.2    Nagel, A.3    Fernie, A.R.4    Lunn, J.E.5    Stitt, M.6
  • 42
    • 75249087100 scopus 로고    scopus 로고
    • Smyth GK. EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • PMID: 19910308
    • Robinson MD, McCarthy DJ, Smyth GK. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 2010; 26(1):139-40. doi: 10.1093/ bioinformatics/btp616 PMID: 19910308
    • (2010) Bioinformatics , vol.26 , Issue.1 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2
  • 43
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on thewwwfor general users and for biologist programmers
    • Misener S, Krawetz S, editors: Humana Press;
    • Rozen S, Skaletsky H. Primer3 on theWWWfor General Users and for Biologist Programmers. In: Misener S, Krawetz S, editors. Bioinformatics Methods and Protocols. Methods in Molecular Biology. 132: Humana Press; 1999. p. 365-86.
    • (1999) Bioinformatics Methods and Protocols. Methods in Molecular Biology , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 44
    • 79959662007 scopus 로고    scopus 로고
    • Assessment of candidate reference genes for expression studies in Vicia faba L. by real-time quantitative PCR
    • Gutierrez N, Giménez MJ, Palomino C, Avila CM. Assessment of candidate reference genes for expression studies in Vicia faba L. by real-time quantitative PCR. Mol Breed. 2011; 28(1):13-24.
    • (2011) Mol Breed , vol.28 , Issue.1 , pp. 13-24
    • Gutierrez, N.1    Giménez, M.J.2    Palomino, C.3    Avila, C.M.4
  • 45
    • 84862234802 scopus 로고    scopus 로고
    • The Arabidopsis Information Resource (TAIR): Improved gene annotation and new tools
    • Lamesch P, Berardini TZ, Li D, Swarbreck D, Wilks C, Sasidharan R, et al. The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools. Nucleic Acids Res. 2012; 40(D1):D1202-D10.
    • (2012) Nucleic Acids Res , vol.40 , Issue.D1 , pp. D1202-D1210
    • Lamesch, P.1    Berardini, T.Z.2    Li, D.3    Swarbreck, D.4    Wilks, C.5    Sasidharan, R.6
  • 46
    • 84891818318 scopus 로고    scopus 로고
    • Griffiths-Jones S. MiRBase: Annotating high confidence microRNAs using deep sequencing data
    • Kozomara A, Griffiths-Jones S. miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res. 2014; 42(D1):D68-D73.
    • (2014) Nucleic Acids Res , vol.42 , Issue.D1 , pp. D68-D73
    • Kozomara, A.1
  • 47
    • 56449107474 scopus 로고    scopus 로고
    • BioVenn-a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
    • Hulsen T, de Vlieg J, Alkema W. BioVenn-a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams. BMC Genomics. 2008; 9(1):488.
    • (2008) BMC Genomics , vol.9 , Issue.1 , pp. 488
    • Hulsen, T.1    De Vlieg, J.2    Alkema, W.3
  • 48
    • 0037356824 scopus 로고    scopus 로고
    • The rest of the iceberg. Legume diversity and evolution in a phylogenetic context
    • PMID: 12644643
    • Doyle JJ, Luckow MA. The Rest of the Iceberg. Legume Diversity and Evolution in a Phylogenetic Context. Plant Physiol. 2003; 131(3):900-10. PMID: 12644643
    • (2003) Plant Physiol , vol.131 , Issue.3 , pp. 900-910
    • Doyle, J.J.1    Luckow, M.A.2
  • 49
    • 84875176954 scopus 로고    scopus 로고
    • Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement
    • Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, et al. Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotech. 2013; 31(3):240-6.
    • (2013) Nat Biotech , vol.31 , Issue.3 , pp. 240-246
    • Varshney, R.K.1    Song, C.2    Saxena, R.K.3    Azam, S.4    Yu, S.5    Sharpe, A.G.6
  • 50
    • 80055106589 scopus 로고    scopus 로고
    • Durable broad-spectrum powdery mildew resistance in pea er1 plants is conferred by natural loss-of-function mutations in PsMLO1
    • PMID: 21726385
    • Humphry M, ReinstÄDler A, Ivanov S, Bisseling TON, Panstruga R. Durable broad-spectrum powdery mildew resistance in pea er1 plants is conferred by natural loss-of-function mutations in PsMLO1. Mol Plant Pathol. 2011; 12(9):866-78. doi: 10.1111/j.1364-3703.2011.00718.x PMID: 21726385
    • (2011) Mol Plant Pathol , vol.12 , Issue.9 , pp. 866-878
    • Humphry, M.1    Reinst, A.2    Dler, A.3    Ivanov, S.4    Bisseling, T.O.N.5    Panstruga, R.6
  • 52
    • 42149115630 scopus 로고    scopus 로고
    • LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana
    • Hundertmark M, Hincha D. LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana. BMC Genomics. 2008; 9(1):118.
    • (2008) BMC Genomics , vol.9 , Issue.1 , pp. 118
    • Hundertmark, M.1    Hincha, D.2
  • 53
    • 65349121783 scopus 로고    scopus 로고
    • Networking by small-molecule hormones in plant immunity
    • PMID: 19377457
    • Pieterse CMJ, Leon-Reyes A, Van der Ent S, Van Wees SCM. Networking by small-molecule hormones in plant immunity. Nat Chem Biol. 2009; 5(5):308-16. doi: 10.1038/nchembio.164 PMID: 19377457
    • (2009) Nat Chem Biol , vol.5 , Issue.5 , pp. 308-316
    • Pieterse, C.M.J.1    Leon-Reyes, A.2    Van Der Ent, S.3    Van Wees Scm4
  • 54
    • 84901683354 scopus 로고    scopus 로고
    • Genomics-assisted breeding in four major pulse crops of developing countries: Present status and prospects
    • Bohra A, Pandey M, Jha U, Singh B, Singh I, Datta D, et al. Genomics-assisted breeding in four major pulse crops of developing countries: present status and prospects. Theor Appl Genet. 2014:1-29.
    • (2014) Theor Appl Genet , pp. 1-29
    • Bohra, A.1    Pandey, M.2    Jha, U.3    Singh, B.4    Singh, I.5    Datta, D.6
  • 55
    • 77956279237 scopus 로고    scopus 로고
    • Assembly of large genomes using second-generation sequencing
    • PMID: 20508146
    • Schatz MC, Delcher AL, Salzberg SL. Assembly of large genomes using second-generation sequencing. Genome Res. 2010; 20(9):1165-73. doi: 10.1101/gr.101360.109 PMID: 20508146
    • (2010) Genome Res , vol.20 , Issue.9 , pp. 1165-1173
    • Schatz, M.C.1    Delcher, A.L.2    Salzberg, S.L.3
  • 56
    • 84898058216 scopus 로고    scopus 로고
    • Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications
    • PMID: 24465857
    • Kudapa H, Azam S, Sharpe AG, Taran B, Li R, Deonovic B, et al. Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications. PLoS ONE. 2014; 9(1):e86039. doi: 10.1371/journal.pone.0086039 PMID: 24465857
    • (2014) PLoS ONE , vol.9 , Issue.1 , pp. e86039
    • Kudapa, H.1    Azam, S.2    Sharpe, A.G.3    Taran, B.4    Li, R.5    Deonovic, B.6
  • 57
    • 28844474433 scopus 로고    scopus 로고
    • The Arabidopsis genome: A foundation for plant research
    • PMID: 16339360
    • Bevan M, Walsh S. The Arabidopsis genome: A foundation for plant research. Genome Res. 2005; 15 (12):1632-42. PMID: 16339360
    • (2005) Genome Res , vol.15 , Issue.12 , pp. 1632-1642
    • Bevan, M.1    Walsh, S.2
  • 58
    • 3543042528 scopus 로고    scopus 로고
    • Computational identification and characterization of novel genes from legumes
    • PMID: 15266052
    • Graham MA, Silverstein KAT, Cannon SB, VandenBosch KA. Computational Identification and Characterization of Novel Genes from Legumes. Plant Physiol. 2004; 135(3):1179-97. PMID: 15266052
    • (2004) Plant Physiol , vol.135 , Issue.3 , pp. 1179-1197
    • Graham, M.A.1    Silverstein, K.A.T.2    Cannon, S.B.3    VandenBosch, K.A.4
  • 59
    • 77649223105 scopus 로고    scopus 로고
    • Comparative analyses reveal distinct sets of lineage-specific genes within Arabidopsis thaliana
    • PMID: 20152032
    • Lin H, Moghe G, Ouyang S, Iezzoni A, Shiu S-H, Gu X, et al. Comparative analyses reveal distinct sets of lineage-specific genes within Arabidopsis thaliana. BMC Evol Biol. 2010; 10:41. doi: 10.1186/1471-2148-10-41 PMID: 20152032
    • (2010) BMC Evol Biol , vol.10 , pp. 41
    • Lin, H.1    Moghe, G.2    Ouyang, S.3    Iezzoni, A.4    Shiu, S.-H.5    Gu, X.6
  • 60
    • 80052500402 scopus 로고    scopus 로고
    • Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa
    • PMID: 21615673
    • Hiremath PJ, Farmer A, Cannon SB, Woodward J, Kudapa H, Tuteja R, et al. Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa. Plant Biotechnol J. 2011; 9(8):922-31. doi: 10.1111/j.1467-7652.2011.00625.x PMID: 21615673
    • (2011) Plant Biotechnol J , vol.9 , Issue.8 , pp. 922-931
    • Hiremath, P.J.1    Farmer, A.2    Cannon, S.B.3    Woodward, J.4    Kudapa, H.5    Tuteja, R.6
  • 62
    • 79959941080 scopus 로고    scopus 로고
    • Single-nucleotide polymorphism discovery by high-throughput sequencing in sorghum
    • Nelson J, Wang S, Wu Y, Li X, Antony G, White F, et al. Single-nucleotide polymorphism discovery by high-throughput sequencing in sorghum. BMC Genomics. 2011; 12(1):352.
    • (2011) BMC Genomics , vol.12 , Issue.1 , pp. 352
    • Nelson, J.1    Wang, S.2    Wu, Y.3    Li, X.4    Antony, G.5    White, F.6
  • 63
    • 33845474931 scopus 로고    scopus 로고
    • Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties
    • PMID: 17085595
    • Rostoks N, Ramsay L, MacKenzie K, Cardle L, Bhat PR, Roose ML, et al. Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties. Proc Natl Acad Sci USA. 2006; 103(49):18656-61. PMID: 17085595
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.49 , pp. 18656-18661
    • Rostoks, N.1    Ramsay, L.2    MacKenzie, K.3    Cardle, L.4    Bhat, P.R.5    Roose, M.L.6
  • 64
    • 0035859020 scopus 로고    scopus 로고
    • Plant pathogens and integrated defence responses to infection
    • PMID: 11459065
    • Dangl JL, Jones JDG. Plant pathogens and integrated defence responses to infection. Nature. 2001; 411(6839):826-33. PMID: 11459065
    • (2001) Nature , vol.411 , Issue.6839 , pp. 826-833
    • Dangl, J.L.1    Jdg, J.2
  • 65
    • 84928031640 scopus 로고    scopus 로고
    • Lathyrus sativus transcriptome resistance response to Ascochyta lathyri investigated by deepSuperSAGE analysis
    • PMID: 25852725
    • Almeida NF, Krezdorn N, Rotter B, Winter P, Rubiales D, Vaz Patto MC. Lathyrus sativus transcriptome resistance response to Ascochyta lathyri investigated by deepSuperSAGE analysis. Front Plant Sci. 2015; 6:178. doi: 10.3389/fpls.2015.00178 PMID: 25852725
    • (2015) Front Plant Sci , vol.6 , pp. 178
    • Almeida, N.F.1    Krezdorn, N.2    Rotter, B.3    Winter, P.4    Rubiales, D.5    Vaz Patto, M.C.6
  • 66
    • 78651345771 scopus 로고    scopus 로고
    • Identification of genes differentially expressed in a resistant reaction to Mycosphaerella pinodes in pea using microarray technology
    • Fondevilla S, Kuster H, Krajinski F, Cubero J, Rubiales D. Identification of genes differentially expressed in a resistant reaction to Mycosphaerella pinodes in pea using microarray technology. BMC Genomics. 2011; 12(1):28.
    • (2011) BMC Genomics , vol.12 , Issue.1 , pp. 28
    • Fondevilla, S.1    Kuster, H.2    Krajinski, F.3    Cubero, J.4    Rubiales, D.5
  • 67
    • 84942890156 scopus 로고    scopus 로고
    • Plant responses to simultaneous biotic and abiotic stress: Molecular mechanisms
    • Rejeb I, Pastor V, Mauch-Mani B. Plant responses to simultaneous biotic and abiotic stress: molecular mechanisms. Plants. 2014; 3(4):458.
    • (2014) Plants , vol.3 , Issue.4 , pp. 458
    • Rejeb, I.1    Pastor, V.2    Mauch-Mani, B.3
  • 68
    • 84875794914 scopus 로고    scopus 로고
    • Signaling cross-talk in plant disease resistance
    • Derksen H, Rampitsch C, Daayf F. Signaling cross-talk in plant disease resistance. Plant Sci. 2013; 207(0):79-87.
    • (2013) Plant Sci , vol.207 , pp. 79-87
    • Derksen, H.1    Rampitsch, C.2    Daayf, F.3
  • 69
    • 71349086784 scopus 로고    scopus 로고
    • Chitin signaling and plant disease resistance
    • PMID: 19704513
    • Wan J, Zhang X-C, Stacey G. Chitin signaling and plant disease resistance. Plant Signal Behav. 2008; 3(10):831-3. PMID: 19704513
    • (2008) Plant Signal Behav , vol.3 , Issue.10 , pp. 831-833
    • Wan, J.1    Zhang, X.-C.2    Stacey, G.3
  • 70
    • 0033179482 scopus 로고    scopus 로고
    • The families of pathogenesis-related proteins, their activities, and comparative analysis of PR-1 type proteins
    • Van Loon LC, Van Strien EA. The families of pathogenesis-related proteins, their activities, and comparative analysis of PR-1 type proteins. Physiol Mol Plant Pathol. 1999; 55(2):85-97.
    • (1999) Physiol Mol Plant Pathol , vol.55 , Issue.2 , pp. 85-97
    • Van Loon, L.C.1    Van Strien, E.A.2
  • 71
    • 33748941620 scopus 로고    scopus 로고
    • Significance of inducible defense-related proteins in infected plants
    • van Loon LC, Rep M, Pieterse CMJ. Significance of Inducible Defense-related Proteins in Infected Plants. Annu Rev Phytopathol. 2006; 44(1):135-62.
    • (2006) Annu Rev Phytopathol , vol.44 , Issue.1 , pp. 135-162
    • Van Loon, L.C.1    Rep, M.2    Cmj, P.3
  • 72
    • 84864701726 scopus 로고    scopus 로고
    • Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean
    • Kang Y, Kim K, Shim S, Yoon M, Sun S, Kim M, et al. Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean. BMC Plant Biol. 2012; 12(1):139.
    • (2012) BMC Plant Biol , vol.12 , Issue.1 , pp. 139
    • Kang, Y.1    Kim, K.2    Shim, S.3    Yoon, M.4    Sun, S.5    Kim, M.6
  • 73
    • 0028829961 scopus 로고
    • Stress-induced phenylpropanoid metabolism
    • PMID: 12242399
    • Dixon RA, Paiva NL. Stress-Induced Phenylpropanoid Metabolism. The Plant Cell. 1995; 7(7):1085-97. PMID: 12242399
    • (1995) The Plant Cell , vol.7 , Issue.7 , pp. 1085-1097
    • Dixon, R.A.1    Paiva, N.L.2
  • 74
    • 11244335493 scopus 로고    scopus 로고
    • Suppression of induced resistance in cucumber through disruption of the flavonoid pathway
    • PMID: 18943844
    • Fofana B, Benhamou N, McNally DJ, Labbé C, Séguin A, Bélanger RR. Suppression of Induced Resistance in Cucumber Through Disruption of the Flavonoid Pathway. Phytopathology. 2005; 95(1):114-23. doi: 10.1094/PHYTO-95-0114 PMID: 18943844
    • (2005) Phytopathology , vol.95 , Issue.1 , pp. 114-123
    • Fofana, B.1    Benhamou, N.2    McNally, D.J.3    Labbé, C.4    Séguin, A.5    Bélanger, R.R.6
  • 75
    • 33845759342 scopus 로고    scopus 로고
    • Effects of phenylpropanoid and energetic metabolism inhibition on faba bean resistance mechanisms to rust
    • PMID: 18942937
    • Rojas-Molina MDM, Rubiales D, Prats E, Sillero JC. Effects of Phenylpropanoid and Energetic Metabolism Inhibition on Faba Bean Resistance Mechanisms to Rust. Phytopathology. 2007; 97(1):60-5. doi: 10.1094/PHYTO-97-0060 PMID: 18942937
    • (2007) Phytopathology , vol.97 , Issue.1 , pp. 60-65
    • Rojas-Molina, M.D.M.1    Rubiales, D.2    Prats, E.3    Sillero, J.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.