-
1
-
-
84942529745
-
-
World Malaria Report
-
WHO. World Malaria Report. 2013. http://www.who.int/malaria/publications/world_malaria_report_2013/en/.
-
(2013)
-
-
-
2
-
-
84920607648
-
Novel approaches to identify protective malaria vaccine candidates
-
Chia WN, Goh YS, Renia L. Novel approaches to identify protective malaria vaccine candidates. Front Microbiol. 2014;5:586.
-
(2014)
Front Microbiol
, vol.5
, pp. 586
-
-
Chia, W.N.1
Goh, Y.S.2
Renia, L.3
-
3
-
-
84873557949
-
Malaria biology and disease pathogenesis: insights for new treatments
-
Miller LH, Ackerman HC, Su XZ, Wellems TE. Malaria biology and disease pathogenesis: insights for new treatments. Nat Med. 2013;19:156-67.
-
(2013)
Nat Med
, vol.19
, pp. 156-167
-
-
Miller, L.H.1
Ackerman, H.C.2
Su, X.Z.3
Wellems, T.E.4
-
4
-
-
84921749148
-
Infectious diseases, Understanding artemisinin resistance
-
Sibley CH. Infectious diseases, Understanding artemisinin resistance. Science. 2015;347:373-4.
-
(2015)
Science
, vol.347
, pp. 373-374
-
-
Sibley, C.H.1
-
5
-
-
1342303735
-
Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray
-
Bozdech Z, Zhu J, Joachimiak MP, Cohen FE, Pulliam B, DeRisi JL. Expression profiling of the schizont and trophozoite stages of Plasmodium falciparum with a long-oligonucleotide microarray. Genome Biol. 2003;4:R9.
-
(2003)
Genome Biol
, vol.4
, pp. R9
-
-
Bozdech, Z.1
Zhu, J.2
Joachimiak, M.P.3
Cohen, F.E.4
Pulliam, B.5
DeRisi, J.L.6
-
6
-
-
4243071596
-
The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum
-
Bozdech Z, Llinas M, Pulliam BL, Wong ED, Zhu J, DeRisi JL. The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum. PLoS Biol. 2003;1:E5.
-
(2003)
PLoS Biol
, vol.1
, pp. E5
-
-
Bozdech, Z.1
Llinas, M.2
Pulliam, B.L.3
Wong, E.D.4
Zhu, J.5
DeRisi, J.L.6
-
7
-
-
84876342100
-
Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum
-
Guizetti J, Scherf A. Silence, activate, poise and switch! Mechanisms of antigenic variation in Plasmodium falciparum. Cell Microbiol. 2013;15:718-26.
-
(2013)
Cell Microbiol
, vol.15
, pp. 718-726
-
-
Guizetti, J.1
Scherf, A.2
-
8
-
-
84902526618
-
Epigenetic memory takes center stage in the survival strategy of malaria parasites
-
Voss TS, Bozdech Z, Bartfai R. Epigenetic memory takes center stage in the survival strategy of malaria parasites. Curr Opin Microbiol. 2014;20:88-95.
-
(2014)
Curr Opin Microbiol
, vol.20
, pp. 88-95
-
-
Voss, T.S.1
Bozdech, Z.2
Bartfai, R.3
-
9
-
-
84908151900
-
The sound of sexual commitment breaks the silencing of malaria parasites
-
Alano P. The sound of sexual commitment breaks the silencing of malaria parasites. Trends Parasitol. 2014;30:509-10.
-
(2014)
Trends Parasitol
, vol.30
, pp. 509-510
-
-
Alano, P.1
-
10
-
-
78951483348
-
The Apicomplexan AP2 family: integral factors regulating Plasmodium development
-
Painter HJ, Campbell TL, Llinas M. The Apicomplexan AP2 family: integral factors regulating Plasmodium development. Mol Biochem Parasitol. 2011;176:1-7.
-
(2011)
Mol Biochem Parasitol
, vol.176
, pp. 1-7
-
-
Painter, H.J.1
Campbell, T.L.2
Llinas, M.3
-
11
-
-
84899100823
-
Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum
-
Siegel TN, Hon CC, Zhang Q, Lopez-Rubio JJ, Scheidig-Benatar C, Martins RM, et al. Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum. BMC Genomics. 2014;15:150.
-
(2014)
BMC Genomics
, vol.15
, pp. 150
-
-
Siegel, T.N.1
Hon, C.C.2
Zhang, Q.3
Lopez-Rubio, J.J.4
Scheidig-Benatar, C.5
Martins, R.M.6
-
12
-
-
84899567480
-
Deep profiling of the novel intermediate-size noncoding RNAs in intraerythrocytic Plasmodium falciparum
-
Wei C, Xiao T, Zhang P, Wang Z, Chen X, Zhang L, et al. Deep profiling of the novel intermediate-size noncoding RNAs in intraerythrocytic Plasmodium falciparum. PLoS One. 2014;9:e92946.
-
(2014)
PLoS One
, vol.9
, pp. e92946
-
-
Wei, C.1
Xiao, T.2
Zhang, P.3
Wang, Z.4
Chen, X.5
Zhang, L.6
-
13
-
-
0037015614
-
Genome sequence of the human malaria parasite Plasmodium falciparum
-
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, et al. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature. 2002;419:498-511.
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
White, O.4
Berriman, M.5
Hyman, R.W.6
-
14
-
-
84904244260
-
Exonuclease-mediated degradation of nascent RNA silences genes linked to severe malaria
-
Zhang Q, Siegel TN, Martins RM, Wang F, Cao J, Gao Q, et al. Exonuclease-mediated degradation of nascent RNA silences genes linked to severe malaria. Nature. 2014;513:431-5.
-
(2014)
Nature
, vol.513
, pp. 431-435
-
-
Zhang, Q.1
Siegel, T.N.2
Martins, R.M.3
Wang, F.4
Cao, J.5
Gao, Q.6
-
15
-
-
58349118483
-
Quantitative protein expression profiling reveals extensive post-transcriptional regulation and post-translational modifications in schizont-stage malaria parasites
-
Foth BJ, Zhang N, Mok S, Preiser PR, Bozdech Z. Quantitative protein expression profiling reveals extensive post-transcriptional regulation and post-translational modifications in schizont-stage malaria parasites. Genome Biol. 2008;9:R177.
-
(2008)
Genome Biol
, vol.9
, pp. R177
-
-
Foth, B.J.1
Zhang, N.2
Mok, S.3
Preiser, P.R.4
Bozdech, Z.5
-
16
-
-
80051654221
-
Quantitative time-course profiling of parasite and host cell proteins in the human malaria parasite Plasmodium falciparum
-
Foth BJ, Zhang N, Chaal BK, Sze SK, Preiser PR, Bozdech Z. Quantitative time-course profiling of parasite and host cell proteins in the human malaria parasite Plasmodium falciparum. Mol Cell Proteomics. 2011;10:006411.
-
(2011)
Mol Cell Proteomics
, vol.10
, pp. 006411
-
-
Foth, B.J.1
Zhang, N.2
Chaal, B.K.3
Sze, S.K.4
Preiser, P.R.5
Bozdech, Z.6
-
17
-
-
8744234024
-
Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle
-
Le Roch KG, Johnson JR, Florens L, Zhou Y, Santrosyan A, Grainger M, et al. Global analysis of transcript and protein levels across the Plasmodium falciparum life cycle. Genome Res. 2004;14:2308-18.
-
(2004)
Genome Res
, vol.14
, pp. 2308-2318
-
-
Roch, K.G.1
Johnson, J.R.2
Florens, L.3
Zhou, Y.4
Santrosyan, A.5
Grainger, M.6
-
18
-
-
84887911820
-
Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum
-
Bunnik EM, Chung DW, Hamilton M, Ponts N, Saraf A, Prudhomme J, et al. Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum. Genome Biol. 2013;14:R128.
-
(2013)
Genome Biol
, vol.14
, pp. R128
-
-
Bunnik, E.M.1
Chung, D.W.2
Hamilton, M.3
Ponts, N.4
Saraf, A.5
Prudhomme, J.6
-
19
-
-
84929469529
-
Genome-wide regulatory dynamics of translation in the asexual blood stages
-
Caro F., Ahyong V., Betegon M., and DeRisi J.L. Genome-wide regulatory dynamics of translation in the asexual blood stages. Elife. 2014;3. doi: 10.7554/eLife.04106.
-
(2014)
Elife
, vol.3
-
-
Caro, F.1
Ahyong, V.2
Betegon, M.3
DeRisi, J.L.4
-
20
-
-
84860168123
-
PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites
-
Chene A, Vembar SS, Riviere L, Lopez-Rubio JJ, Claes A, Siegel TN, et al. PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites. Nucleic Acids Res. 2012;40:3066-77.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 3066-3077
-
-
Chene, A.1
Vembar, S.S.2
Riviere, L.3
Lopez-Rubio, J.J.4
Claes, A.5
Siegel, T.N.6
-
21
-
-
84856833535
-
Identification and molecular characterization of an Alba-family protein from human malaria parasite Plasmodium falciparum
-
Goyal M, Alam A, Iqbal MS, Dey S, Bindu S, Pal C, et al. Identification and molecular characterization of an Alba-family protein from human malaria parasite Plasmodium falciparum. Nucleic Acids Res. 2012;40:1174-90.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 1174-1190
-
-
Goyal, M.1
Alam, A.2
Iqbal, M.S.3
Dey, S.4
Bindu, S.5
Pal, C.6
-
22
-
-
79952732629
-
Asparagine repeat function in a Plasmodium falciparum protein assessed via a regulatable fluorescent affinity tag
-
Muralidharan V, Oksman A, Iwamoto M, Wandless TJ, Goldberg DE. Asparagine repeat function in a Plasmodium falciparum protein assessed via a regulatable fluorescent affinity tag. Proc Natl Acad Sci U S A. 2011;108:4411-6.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 4411-4416
-
-
Muralidharan, V.1
Oksman, A.2
Iwamoto, M.3
Wandless, T.J.4
Goldberg, D.E.5
-
23
-
-
84965186376
-
Genome-wide RIP-Chip analysis of translational repressor-bound mRNAs in the Plasmodium gametocyte
-
Guerreiro A, Deligianni E, Santos JM, Silva PA, Louis C, Pain A, et al. Genome-wide RIP-Chip analysis of translational repressor-bound mRNAs in the Plasmodium gametocyte. Genome Biol. 2014;15:493.
-
(2014)
Genome Biol
, vol.15
, pp. 493
-
-
Guerreiro, A.1
Deligianni, E.2
Santos, J.M.3
Silva, P.A.4
Louis, C.5
Pain, A.6
-
24
-
-
21744442923
-
Obligate heterodimerization of the archaeal Alba2 protein with Alba1 provides a mechanism for control of DNA packaging
-
Jelinska C, Conroy MJ, Craven CJ, Hounslow AM, Bullough PA, Waltho JP, et al. Obligate heterodimerization of the archaeal Alba2 protein with Alba1 provides a mechanism for control of DNA packaging. Structure. 2005;13:963-71.
-
(2005)
Structure
, vol.13
, pp. 963-971
-
-
Jelinska, C.1
Conroy, M.J.2
Craven, C.J.3
Hounslow, A.M.4
Bullough, P.A.5
Waltho, J.P.6
-
25
-
-
77950878510
-
Dimer-dimer stacking interactions are important for nucleic acid binding by the archaeal chromatin protein Alba
-
Jelinska C, Petrovic-Stojanovska B, Ingledew WJ, White MF. Dimer-dimer stacking interactions are important for nucleic acid binding by the archaeal chromatin protein Alba. Biochem J. 2010;427:49-55.
-
(2010)
Biochem J
, vol.427
, pp. 49-55
-
-
Jelinska, C.1
Petrovic-Stojanovska, B.2
Ingledew, W.J.3
White, M.F.4
-
26
-
-
0032877216
-
Finding the right RNA: identification of cellular mRNA substrates for RNA-binding proteins
-
Trifillis P, Day N, Kiledjian M. Finding the right RNA: identification of cellular mRNA substrates for RNA-binding proteins. RNA. 1999;5:1071-82.
-
(1999)
RNA
, vol.5
, pp. 1071-1082
-
-
Trifillis, P.1
Day, N.2
Kiledjian, M.3
-
27
-
-
0141633042
-
Discovery of gene function by expression profiling of the malaria parasite life cycle
-
Le Roch KG, Zhou Y, Blair PL, Grainger M, Moch JK, Haynes JD, et al. Discovery of gene function by expression profiling of the malaria parasite life cycle. Science. 2003;301:1503-8.
-
(2003)
Science
, vol.301
, pp. 1503-1508
-
-
Roch, K.G.1
Zhou, Y.2
Blair, P.L.3
Grainger, M.4
Moch, J.K.5
Haynes, J.D.6
-
28
-
-
73949130070
-
Dissecting the expression dynamics of RNA-binding proteins in posttranscriptional regulatory networks
-
Mittal N, Roy N, Babu MM, Janga SC. Dissecting the expression dynamics of RNA-binding proteins in posttranscriptional regulatory networks. Proc Natl Acad Sci U S A. 2009;106:20300-5.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 20300-20305
-
-
Mittal, N.1
Roy, N.2
Babu, M.M.3
Janga, S.C.4
-
29
-
-
66149141833
-
Statistical estimation of cell-cycle progression and lineage commitment in Plasmodium falciparum reveals a homogeneous pattern of transcription in ex vivo culture
-
Lemieux JE, Gomez-Escobar N, Feller A, Carret C, Amambua-Ngwa A, Pinches R, et al. Statistical estimation of cell-cycle progression and lineage commitment in Plasmodium falciparum reveals a homogeneous pattern of transcription in ex vivo culture. Proc Natl Acad Sci U S A. 2009;106:7559-64.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 7559-7564
-
-
Lemieux, J.E.1
Gomez-Escobar, N.2
Feller, A.3
Carret, C.4
Amambua-Ngwa, A.5
Pinches, R.6
-
30
-
-
12144291195
-
MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes
-
Thimm O, Blasing O, Gibon Y, Nagel A, Meyer S, Kruger P, et al. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. Plant J. 2004;37:914-39.
-
(2004)
Plant J
, vol.37
, pp. 914-939
-
-
Thimm, O.1
Blasing, O.2
Gibon, Y.3
Nagel, A.4
Meyer, S.5
Kruger, P.6
-
31
-
-
84929998891
-
Trypanosoma brucei RRM1 is a nuclear RNA-binding protein and modulator of chromatin structure
-
Naguleswaran A, Gunasekera K, Schimanski B, Heller M, Hemphill A, Ochsenreiter T, et al. Trypanosoma brucei RRM1 is a nuclear RNA-binding protein and modulator of chromatin structure. MBio. 2015;6:e00114.
-
(2015)
MBio
, vol.6
, pp. e00114
-
-
Naguleswaran, A.1
Gunasekera, K.2
Schimanski, B.3
Heller, M.4
Hemphill, A.5
Ochsenreiter, T.6
-
32
-
-
78650253763
-
Genome-wide identification of polycomb-associated RNAs by RIP-seq
-
Zhao J, Ohsumi TK, Kung JT, Ogawa Y, Grau DJ, Sarma K, et al. Genome-wide identification of polycomb-associated RNAs by RIP-seq. Mol Cell. 2010;40:939-53.
-
(2010)
Mol Cell
, vol.40
, pp. 939-953
-
-
Zhao, J.1
Ohsumi, T.K.2
Kung, J.T.3
Ogawa, Y.4
Grau, D.J.5
Sarma, K.6
-
33
-
-
84939188283
-
Global mRNA selection mechanisms for translation initiation
-
Costello J, Castelli LM, Rowe W, Kershaw CJ, Talavera D, Mohammad-Qureshi SS, et al. Global mRNA selection mechanisms for translation initiation. Genome Biol. 2015;16:10.
-
(2015)
Genome Biol
, vol.16
, pp. 10
-
-
Costello, J.1
Castelli, L.M.2
Rowe, W.3
Kershaw, C.J.4
Talavera, D.5
Mohammad-Qureshi, S.S.6
-
34
-
-
84862883971
-
RNA-protein interactions in vivo: global gets specific
-
Ankö ML, Neugebauer KM. RNA-protein interactions in vivo: global gets specific. Trends Biochem Sci. 2012;37:255-62.
-
(2012)
Trends Biochem Sci
, vol.37
, pp. 255-262
-
-
Ankö, M.L.1
Neugebauer, K.M.2
-
35
-
-
0025194307
-
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
-
Tuerk C, Gold L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. Science. 1990;249:505-10.
-
(1990)
Science
, vol.249
, pp. 505-510
-
-
Tuerk, C.1
Gold, L.2
-
36
-
-
84901913783
-
RNA Bind-n-Seq: quantitative assessment of the sequence and structural binding specificity of RNA binding proteins
-
Lambert N, Robertson A, Jangi M, McGeary S, Sharp PA, Burge CB. RNA Bind-n-Seq: quantitative assessment of the sequence and structural binding specificity of RNA binding proteins. Mol Cell. 2014;54:887-900.
-
(2014)
Mol Cell
, vol.54
, pp. 887-900
-
-
Lambert, N.1
Robertson, A.2
Jangi, M.3
McGeary, S.4
Sharp, P.A.5
Burge, C.B.6
-
37
-
-
77950920903
-
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP
-
Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, et al. Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell. 2010;141:129-41.
-
(2010)
Cell
, vol.141
, pp. 129-141
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
-
38
-
-
84892172028
-
Global target mRNA specification and regulation by the RNA-binding protein ZFP36
-
Mukherjee N, Jacobs NC, Hafner M, Kennington EA, Nusbaum JD, Tuschl T, et al. Global target mRNA specification and regulation by the RNA-binding protein ZFP36. Genome Biol. 2014;15:R12.
-
(2014)
Genome Biol
, vol.15
, pp. R12
-
-
Mukherjee, N.1
Jacobs, N.C.2
Hafner, M.3
Kennington, E.A.4
Nusbaum, J.D.5
Tuschl, T.6
-
39
-
-
33746875960
-
Regulation of sexual development of Plasmodium by translational repression
-
Mair GR, Braks JA, Garver LS, Wiegant JC, Hall N, Dirks RW, et al. Regulation of sexual development of Plasmodium by translational repression. Science. 2006;313:667-9.
-
(2006)
Science
, vol.313
, pp. 667-669
-
-
Mair, G.R.1
Braks, J.A.2
Garver, L.S.3
Wiegant, J.C.4
Hall, N.5
Dirks, R.W.6
-
40
-
-
77649253115
-
Universal features of post-transcriptional gene regulation are critical for Plasmodium zygote development
-
Mair GR, Lasonder E, Garver LS, Franke-Fayard BM, Carret CK, Wiegant JC, et al. Universal features of post-transcriptional gene regulation are critical for Plasmodium zygote development. PLoS Pathog. 2010;6:e1000767.
-
(2010)
PLoS Pathog
, vol.6
, pp. e1000767
-
-
Mair, G.R.1
Lasonder, E.2
Garver, L.S.3
Franke-Fayard, B.M.4
Carret, C.K.5
Wiegant, J.C.6
-
41
-
-
84908103865
-
An Alba-domain protein contributes to the stage-regulated stability of amastin transcripts in Leishmania
-
Dupe A, Dumas C, Papadopoulou B. An Alba-domain protein contributes to the stage-regulated stability of amastin transcripts in Leishmania. Mol Microbiol. 2014;91:548-61.
-
(2014)
Mol Microbiol
, vol.91
, pp. 548-561
-
-
Dupe, A.1
Dumas, C.2
Papadopoulou, B.3
-
42
-
-
84875700718
-
Toxoplasma gondii Alba proteins are involved in translational control of gene expression
-
Gissot M, Walker R, Delhaye S, Alayi TD, Huot L, Hot D, et al. Toxoplasma gondii Alba proteins are involved in translational control of gene expression. J Mol Biol. 2013;425:1287-301.
-
(2013)
J Mol Biol
, vol.425
, pp. 1287-1301
-
-
Gissot, M.1
Walker, R.2
Delhaye, S.3
Alayi, T.D.4
Huot, L.5
Hot, D.6
-
43
-
-
79960647138
-
Alba-domain proteins of Trypanosoma brucei are cytoplasmic RNA-binding proteins that interact with the translation machinery
-
Mani J, Guttinger A, Schimanski B, Heller M, Acosta-Serrano A, Pescher P, et al. Alba-domain proteins of Trypanosoma brucei are cytoplasmic RNA-binding proteins that interact with the translation machinery. PLoS One. 2011;6:e22463.
-
(2011)
PLoS One
, vol.6
, pp. e22463
-
-
Mani, J.1
Guttinger, A.2
Schimanski, B.3
Heller, M.4
Acosta-Serrano, A.5
Pescher, P.6
-
44
-
-
84911463801
-
Molecular characterization of Plasmodium falciparum Bruno/CELF RNA binding proteins
-
Wongsombat C, Aroonsri A, Kamchonwongpaisan S, Morgan HP, Walkinshaw MD, Yuthavong Y, et al. Molecular characterization of Plasmodium falciparum Bruno/CELF RNA binding proteins. Mol Biochem Parasitol. 2014;198:1-10.
-
(2014)
Mol Biochem Parasitol
, vol.198
, pp. 1-10
-
-
Wongsombat, C.1
Aroonsri, A.2
Kamchonwongpaisan, S.3
Morgan, H.P.4
Walkinshaw, M.D.5
Yuthavong, Y.6
-
45
-
-
34250735674
-
RNA regulons: coordination of post-transcriptional events
-
Keene JD. RNA regulons: coordination of post-transcriptional events. Nat Rev Genet. 2007;8:533-43.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 533-543
-
-
Keene, J.D.1
-
46
-
-
84942522813
-
A Plasmodium falciparum bromodomain protein regulates invasion gene expression
-
Josling GA, Petter M, Oehring SC, Gupta AP, Dietz O, Wilson DW, et al. A Plasmodium falciparum bromodomain protein regulates invasion gene expression. Cell Host Microbe. 2015;17:741-51.
-
(2015)
Cell Host Microbe
, vol.17
, pp. 741-751
-
-
Josling, G.A.1
Petter, M.2
Oehring, S.C.3
Gupta, A.P.4
Dietz, O.5
Wilson, D.W.6
-
47
-
-
78449231932
-
Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite
-
Campbell TL, De Silva EK, Olszewski KL, Elemento O, Llinás M. Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite. PLoS Pathog. 2010;6:e1001165.
-
(2010)
PLoS Pathog
, vol.6
, pp. e1001165
-
-
Campbell, T.L.1
Silva, E.K.2
Olszewski, K.L.3
Elemento, O.4
Llinás, M.5
-
48
-
-
82555196646
-
Global kinomic and phospho-proteomic analyses of the human malaria parasite Plasmodium falciparum
-
Solyakov L, Halbert J, Alam MM, Semblat JP, Dorin-Semblat D, Reininger L, et al. Global kinomic and phospho-proteomic analyses of the human malaria parasite Plasmodium falciparum. Nat Commun. 2011;2:565.
-
(2011)
Nat Commun
, vol.2
, pp. 565
-
-
Solyakov, L.1
Halbert, J.2
Alam, M.M.3
Semblat, J.P.4
Dorin-Semblat, D.5
Reininger, L.6
-
49
-
-
0037023326
-
The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation
-
Bell SD, Botting CH, Wardleworth BN, Jackson SP, White MF. The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation. Science. 2002;296:148-51.
-
(2002)
Science
, vol.296
, pp. 148-151
-
-
Bell, S.D.1
Botting, C.H.2
Wardleworth, B.N.3
Jackson, S.P.4
White, M.F.5
-
50
-
-
84882894823
-
Key molecular events during host cell invasion by Apicomplexan pathogens
-
Sharma P, Chitnis CE. Key molecular events during host cell invasion by Apicomplexan pathogens. Curr Opin Microbiol. 2013;16:432-7.
-
(2013)
Curr Opin Microbiol
, vol.16
, pp. 432-437
-
-
Sharma, P.1
Chitnis, C.E.2
-
51
-
-
84927799400
-
Translational regulation during stage transitions in malaria parasites
-
Cui L, Lindner S, Miao J. Translational regulation during stage transitions in malaria parasites. Ann N Y Acad Sci. 2014;1342:1-9.
-
(2014)
Ann N Y Acad Sci
, vol.1342
, pp. 1-9
-
-
Cui, L.1
Lindner, S.2
Miao, J.3
-
52
-
-
84876860098
-
Puf mediates translation repression of transmission-blocking vaccine candidates in malaria parasites
-
Miao J, Fan Q, Parker D, Li X, Li J, Cui L. Puf mediates translation repression of transmission-blocking vaccine candidates in malaria parasites. PLoS Pathog. 2013;9:e1003268.
-
(2013)
PLoS Pathog
, vol.9
, pp. e1003268
-
-
Miao, J.1
Fan, Q.2
Parker, D.3
Li, X.4
Li, J.5
Cui, L.6
-
54
-
-
80052382456
-
CCR4-associated factor 1 coordinates the expression of Plasmodium falciparum egress and invasion proteins
-
Balu B, Maher SP, Pance A, Chauhan C, Naumov AV, Andrews RM, et al. CCR4-associated factor 1 coordinates the expression of Plasmodium falciparum egress and invasion proteins. Eukaryot Cell. 2011;10:1257-63.
-
(2011)
Eukaryot Cell
, vol.10
, pp. 1257-1263
-
-
Balu, B.1
Maher, S.P.2
Pance, A.3
Chauhan, C.4
Naumov, A.V.5
Andrews, R.M.6
-
55
-
-
84857755131
-
From cradle to grave: RNA biology in malaria parasites
-
Hughes KR, Philip N, Starnes GL, Taylor S, Waters AP. From cradle to grave: RNA biology in malaria parasites. Wiley Interdiscip Rev RNA. 2010;1:287-303.
-
(2010)
Wiley Interdiscip Rev RNA
, vol.1
, pp. 287-303
-
-
Hughes, K.R.1
Philip, N.2
Starnes, G.L.3
Taylor, S.4
Waters, A.P.5
-
56
-
-
81755161549
-
ALBA proteins are stage regulated during trypanosome development in the tsetse fly and participate in differentiation
-
Subota I, Rotureau B, Blisnick T, Ngwabyt S, Durand-Dubief M, Engstler M, et al. ALBA proteins are stage regulated during trypanosome development in the tsetse fly and participate in differentiation. Mol Biol Cell. 2011;22:4205-19.
-
(2011)
Mol Biol Cell
, vol.22
, pp. 4205-4219
-
-
Subota, I.1
Rotureau, B.2
Blisnick, T.3
Ngwabyt, S.4
Durand-Dubief, M.5
Engstler, M.6
-
57
-
-
84905664346
-
Strategies for designing and monitoring malaria vaccines targeting diverse antigens
-
Barry AE, Arnott A. Strategies for designing and monitoring malaria vaccines targeting diverse antigens. Front Immunol. 2014;5:359.
-
(2014)
Front Immunol
, vol.5
, pp. 359
-
-
Barry, A.E.1
Arnott, A.2
-
58
-
-
84934976258
-
A novel multiple-stage antimalarial agent that inhibits protein synthesis
-
Baragaña B, Hallyburton I, Lee MC, Norcross NR, Grimaldi R, Otto TD, et al. A novel multiple-stage antimalarial agent that inhibits protein synthesis. Nature. 2015;522:315-20.
-
(2015)
Nature
, vol.522
, pp. 315-320
-
-
Baragaña, B.1
Hallyburton, I.2
Lee, M.C.3
Norcross, N.R.4
Grimaldi, R.5
Otto, T.D.6
-
59
-
-
84919930151
-
Analogs of natural aminoacyl-tRNA synthetase inhibitors clear malaria in vivo
-
Novoa EM, Camacho N, Tor A, Wilkinson B, Moss S, Marin-Garcia P, et al. Analogs of natural aminoacyl-tRNA synthetase inhibitors clear malaria in vivo. Proc Natl Acad Sci U S A. 2014;111:E5508-17.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, pp. E5508-E5517
-
-
Novoa, E.M.1
Camacho, N.2
Tor, A.3
Wilkinson, B.4
Moss, S.5
Marin-Garcia, P.6
-
60
-
-
33846117155
-
A novel protein kinase family in Plasmodium falciparum is differentially transcribed and secreted to various cellular compartments of the host cell
-
Nunes MC, Goldring JP, Doerig C, Scherf A. A novel protein kinase family in Plasmodium falciparum is differentially transcribed and secreted to various cellular compartments of the host cell. Mol Microbiol. 2007;63:391-403.
-
(2007)
Mol Microbiol
, vol.63
, pp. 391-403
-
-
Nunes, M.C.1
Goldring, J.P.2
Doerig, C.3
Scherf, A.4
-
61
-
-
84942529746
-
Methods in Malaria Res.
-
6th edition.
-
Methods in Malaria Res. 2013, 6th edition. https://www.mr4.org/Portals/3/Methods_In_Malaria_Research-6th_edition.pdf
-
(2013)
-
-
-
62
-
-
0030006717
-
Characterization of promoters and stable transfection by homologous and nonhomologous recombination in Plasmodium falciparum
-
Crabb BS, Cowman AF. Characterization of promoters and stable transfection by homologous and nonhomologous recombination in Plasmodium falciparum. Proc Natl Acad Sci U S A. 1996;93:7289-94.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 7289-7294
-
-
Crabb, B.S.1
Cowman, A.F.2
-
63
-
-
0029894292
-
A novel epitope tag system to study protein targeting and organelle biogenesis in Trypanosoma brucei
-
Bastin P, Bagherzadeh Z, Matthews KR, Gull K. A novel epitope tag system to study protein targeting and organelle biogenesis in Trypanosoma brucei. Mol Biochem Parasitol. 1996;77:235-9.
-
(1996)
Mol Biochem Parasitol
, vol.77
, pp. 235-239
-
-
Bastin, P.1
Bagherzadeh, Z.2
Matthews, K.R.3
Gull, K.4
-
64
-
-
34547635662
-
Members of the low-molecular-mass rhoptry protein complex of Plasmodium falciparum bind to the surface of normal erythrocytes
-
Sterkers Y, Scheidig C, da Rocha M, Lepolard C, Gysin J, Scherf A. Members of the low-molecular-mass rhoptry protein complex of Plasmodium falciparum bind to the surface of normal erythrocytes. J Infect Dis. 2007;196:617-21.
-
(2007)
J Infect Dis
, vol.196
, pp. 617-621
-
-
Sterkers, Y.1
Scheidig, C.2
Rocha, M.3
Lepolard, C.4
Gysin, J.5
Scherf, A.6
-
65
-
-
11144356356
-
The Plasmodium falciparum clag9 gene encodes a rhoptry protein that is transferred to the host erythrocyte upon invasion
-
Ling IT, Florens L, Dluzewski AR, Kaneko O, Grainger M, Yim Lim BY, et al. The Plasmodium falciparum clag9 gene encodes a rhoptry protein that is transferred to the host erythrocyte upon invasion. Mol Microbiol. 2004;52:107-18.
-
(2004)
Mol Microbiol
, vol.52
, pp. 107-118
-
-
Ling, I.T.1
Florens, L.2
Dluzewski, A.R.3
Kaneko, O.4
Grainger, M.5
Yim Lim, B.Y.6
-
67
-
-
84942529747
-
-
FastQC. http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
-
-
-
-
68
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics. 2009;25:1754-60.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
69
-
-
53849146020
-
Model-based analysis of ChIP-Seq (MACS)
-
Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9:R137.
-
(2008)
Genome Biol
, vol.9
, pp. R137
-
-
Zhang, Y.1
Liu, T.2
Meyer, C.A.3
Eeckhoute, J.4
Johnson, D.S.5
Bernstein, B.E.6
-
70
-
-
0001677717
-
Controlling the false discovery rate: a practical and powerful approach to multiple testing
-
Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc B (Methodological). 1995;57:289-300.
-
(1995)
J R Stat Soc B (Methodological)
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
71
-
-
75249087100
-
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson MD, McCarthy DJ, Smyth GK. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 2010;26:139-40.
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
72
-
-
0038048164
-
Statistical issues in cDNA microarray data analysis
-
Smyth GK, Yang YH, Speed T. Statistical issues in cDNA microarray data analysis. Methods Mol Biol. 2003;224:111-36.
-
(2003)
Methods Mol Biol
, vol.224
, pp. 111-136
-
-
Smyth, G.K.1
Yang, Y.H.2
Speed, T.3
-
73
-
-
24044440971
-
BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
-
Maere S, Heymans K, Kuiper M. BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks. Bioinformatics. 2005;21:3448-9.
-
(2005)
Bioinformatics
, vol.21
, pp. 3448-3449
-
-
Maere, S.1
Heymans, K.2
Kuiper, M.3
-
74
-
-
0242490780
-
Cytoscape: a software environment for integrated models of biomolecular interaction networks
-
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 2003;13:2498-504.
-
(2003)
Genome Res
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
-
75
-
-
81755180765
-
A critical role of perinuclear filamentous actin in spatial repositioning and mutually exclusive expression of virulence genes in malaria parasites
-
Zhang Q, Huang Y, Zhang Y, Fang X, Claes A, Duchateau M, et al. A critical role of perinuclear filamentous actin in spatial repositioning and mutually exclusive expression of virulence genes in malaria parasites. Cell Host Microbe. 2011;10:451-63.
-
(2011)
Cell Host Microbe
, vol.10
, pp. 451-463
-
-
Zhang, Q.1
Huang, Y.2
Zhang, Y.3
Fang, X.4
Claes, A.5
Duchateau, M.6
-
76
-
-
84887194550
-
European Nucleotide Archive: supporting datasets
-
European Nucleotide Archive: supporting datasets. https://www.ebi.ac.uk/ena/data/view/PRJEB9611.
-
-
-
|