-
1
-
-
0028953392
-
New and known diketopiperazines from the Caribbean sponge Calyx cf. podatypa
-
Adamczeski M, Reed AR, Crews P. 1995. New and known diketopiperazines from the Caribbean sponge Calyx cf. podatypa. J Nat Prod 58:201-208, doi:10.1021/np50116a007
-
(1995)
J Nat Prod
, vol.58
, pp. 201-208
-
-
Adamczeski, M.1
Reed, A.R.2
Crews, P.3
-
2
-
-
57649209055
-
Assessing the performance of single-copy genes for recovering robust phylogenie
-
Aguileta G, Marthey S, Chiapello H, Lebrun MH, Rodolphe F, Fournier E, Gendrault-Jacquemard A, Giraud T. 2008. Assessing the performance of single-copy genes for recovering robust phylogenies. Syst Biol 57:613-627, doi:10.1080/10635150802306527
-
(2008)
Syst Biol
, vol.57
, pp. 613-627
-
-
Aguileta, G.1
Marthey, S.2
Chiapello, H.3
Lebrun, M.H.4
Rodolphe, F.5
Fournier, E.6
Gendrault-Jacquemard, A.7
Giraud, T.8
-
3
-
-
0025183708
-
Basic local alignment search too
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403-410, doi:10.1016/S0022-2836(05)80360-2
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
4
-
-
84864014303
-
Peptaibols from two unidentified fungi of the order Hypocreales with cytotoxic, antibiotic and anthelmintic activities
-
Ayers S, Ehrmann BM, Adcock AF, Kroll DJ, Carcache de Blanco EJ, Shen Q, Swanson SM, FalkinhamIIIJO, Wani MC, Mitchell SM, Pearce CJ, Oberlies NH. 2012. Peptaibols from two unidentified fungi of the order Hypocreales with cytotoxic, antibiotic and anthelmintic activities. J Pept Sci 18:500-510, doi:10.1002/psc.v18.8
-
(2012)
J Pept Sci
, vol.18
, pp. 500-510
-
-
Ayers, S.1
Ehrmann, B.M.2
Adcock, A.F.3
Kroll, D.J.4
Carcache de Blanco, E.J.5
Shen, Q.6
Swanson, S.M.7
Falkinham, J.O.8
Wani, M.C.9
Mitchell, S.M.10
Pearce, C.J.11
Oberlies, N.H.12
-
5
-
-
34250665812
-
Fungal endophytes in submerged roots
-
Schulz BJE, Boyle CJC, Sieber TN, eds. Berlin, Heideberg: Springer
-
Bärlocher F. 2006. Fungal endophytes in submerged roots. In: Schulz BJE, Boyle CJC, Sieber TN, eds. Microbial root rndophytes. Berlin, Heideberg: Springer. p 179-190.
-
(2006)
Microbial root rndophytes
, pp. 179-190
-
-
Bärlocher, F.1
-
6
-
-
0034622561
-
Sphaerolone and dihydrosphaerolone, two bisnaphthyl-pigments from the fungus Sphaeropsidales sp. F-24'707
-
Bode HB, Zeeck A. 2000. Sphaerolone and dihydrosphaerolone, two bisnaphthyl-pigments from the fungus Sphaeropsidales sp. F-24'707. Phytochem 54:597-601, doi:10.1016/S0031-9422(00)00145-X
-
(2000)
Phytochem
, vol.54
, pp. 597-601
-
-
Bode, H.B.1
Zeeck, A.2
-
7
-
-
77954787758
-
A molecular phylogenetic reappraisal of the Hysteriaceae, Mytilinidiaceae and Gloniaceae (Pleosporomycetidae, Dothideomycetes), with keys to world species
-
Boehm EWA, Mugambi G, Miller AN, Huhndorf SM, Marincowitz S, Spatafora JW, Schoch CL. 2009a. A molecular phylogenetic reappraisal of the Hysteriaceae, Mytilinidiaceae and Gloniaceae (Pleosporomycetidae, Dothideomycetes), with keys to world species. Stud Mycol 64:49-83, doi:10.3114/sim.2009.64.03
-
(2009)
Stud Mycol
, vol.64
, pp. 49-83
-
-
Boehm, E.W.A.1
Mugambi, G.2
Miller, A.N.3
Huhndorf, S.M.4
Marincowitz, S.5
Spatafora, J.W.6
Schoch, C.L.7
-
8
-
-
63049116974
-
On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes
-
Boehm EWA, Schoch CL, Spatafora JW. 2009b. On the evolution of the Hysteriaceae and Mytilinidiaceae (Pleosporomycetidae, Dothideomycetes, Ascomycota) using four nuclear genes. Mycol Res 113:461-479, doi:10.1016/j.mycres.2008.12.001
-
(2009)
Mycol Res
, vol.113
, pp. 461-479
-
-
Boehm, E.W.A.1
Schoch, C.L.2
Spatafora, J.W.3
-
9
-
-
84916210468
-
Tubeufiales ord. nov., integrating sexual and asexual generic names
-
Boonmee S, Rossman A, Liu J-K, Li W-J, Dai D-Q, Bhat J, Jones EBG, McKenzie EC, Xu J-C, Hyde K. 2014. Tubeufiales ord. nov., integrating sexual and asexual generic names. Fungal Divers 68:239-298, doi:10.1007/s13225-014-0304-7
-
(2014)
Fungal Divers
, vol.68
, pp. 239-298
-
-
Boonmee, S.1
Rossman, A.2
Liu, J.-K.3
Li, W.-J.4
Dai, D.-Q.5
Bhat, J.6
Jones, E.B.G.7
McKenzie, E.C.8
Xu, J.-C.9
Hyde, K.10
-
10
-
-
44649127351
-
Community structure of Phialocephala fortinii s. lat. in European tree nurseries and assessment of the potential of the seedlings as dissemination vehicles
-
Brenn N, Menkis A, Grunig CR, Sieber TN, Holdenrieder O. 2008. Community structure of Phialocephala fortinii s. lat. in European tree nurseries and assessment of the potential of the seedlings as dissemination vehicles. Mycol Res 112:650-662, http::10.1016/j.mycres.2007.12.003
-
(2008)
Mycol Res
, vol.112
, pp. 650-662
-
-
Brenn, N.1
Menkis, A.2
Grunig, C.R.3
Sieber, T.N.4
Holdenrieder, O.5
-
11
-
-
33748718780
-
The biosynthetic origin of diketopiperazines derived from D-proline
-
Bull SD, Davies SG, Parkin RM, Sánchez-Sancho F. 1998. The biosynthetic origin of diketopiperazines derived from D-proline. J Chem Soc Perkin1, 2313-2320, doi:10.1039/a802702a
-
(1998)
J Chem Soc Perkin
, vol.1
, pp. 2313-2320
-
-
Bull, S.D.1
Davies, S.G.2
Parkin, R.M.3
Sánchez-Sancho, F.4
-
12
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17:540-552, doi:10.1093/oxfordjournals.molbev.a026334
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
13
-
-
84862749077
-
Isolation and structural determination of the antifouling diketopiperazines from marine-derived Streptomyces praecox 291-11
-
Cho JY, Kang JY, Hong YK, Baek HH, Shin HW, Kim MS. 2012. Isolation and structural determination of the antifouling diketopiperazines from marine-derived Streptomyces praecox 291-11. Biosci Biotechnol Biochem 76:1116-1121.
-
(2012)
Biosci Biotechnol Biochem
, vol.76
, pp. 1116-1121
-
-
Cho, J.Y.1
Kang, J.Y.2
Hong, Y.K.3
Baek, H.H.4
Shin, H.W.5
Kim, M.S.6
-
14
-
-
84864453108
-
jModelTest 2: more models, new heuristics and parallel computing
-
Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9:772, http::10.1038/nmeth.2109
-
(2012)
Nat Methods
, vol.9
, pp. 772
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
15
-
-
84908608893
-
Greensporones: resorcylic acid lactones from an aquatic Halenospora sp
-
El-Elimat T, Raja HA, Day CS, Chen W-L, Swanson SM, Oberlies NH. 2014a. Greensporones: resorcylic acid lactones from an aquatic Halenospora sp. J Nat Prod 77: 2088-2098, doi:10.1021/np500497r
-
(2014)
J Nat Prod
, vol.77
, pp. 2088-2098
-
-
El-Elimat, T.1
Raja, H.A.2
Day, C.S.3
Chen, W.-L.4
Swanson, S.M.5
Oberlies, N.H.6
-
16
-
-
84901841120
-
Isochromenones, isobenzofuranone and tetrahydronaphthalenes produced by Paraphoma radicina, a fungus isolated from a freshwater habitat
-
El-Elimat T, Raja HA, Figueroa M, FalkinhamIIIJO, Oberlies NH. 2014b. Isochromenones, isobenzofuranone and tetrahydronaphthalenes produced by Paraphoma radicina, a fungus isolated from a freshwater habitat. Phytochem 104:114-120, doi:10.1016/j.phytochem.2014.04.006
-
(2014)
Phytochem
, vol.104
, pp. 114-120
-
-
El-Elimat, T.1
Raja, H.A.2
Figueroa, M.3
Falkinham, J.O.4
Oberlies, N.H.5
-
17
-
-
84925813996
-
Sorbicillinoid analogs with cytotoxic and selective anti-Aspergillus activities from Scytalidium album
-
El-Elimat T, Raja HA, Figueroa M, Swanson SM, FalkinhamIIIJO, Lucas DM, Grever MR, Wani MC, Pearce CJ, Oberlies NH. 2014c. Sorbicillinoid analogs with cytotoxic and selective anti-Aspergillus activities from Scytalidium album. J Antibiot 68:191-196.
-
(2014)
J Antibiot
, vol.68
, pp. 191-196
-
-
El-Elimat, T.1
Raja, H.A.2
Figueroa, M.3
Swanson, S.M.4
Falkinham, J.O.5
Lucas, D.M.6
Grever, M.R.7
Wani, M.C.8
Pearce, C.J.9
Oberlies, N.H.10
-
18
-
-
80053189957
-
Regiolone and isosclerone, two enantiomeric phytotoxic naphthalenone pentaketides: computational assignment of absolute configuration and its relationship with phytotoxic activity
-
Evidente A, Superchi S, Cimmino A, Mazzeo G, Mugnai L, Rubiales D, Andolfi A, Villegas-Fernández AM. 2011. Regiolone and isosclerone, two enantiomeric phytotoxic naphthalenone pentaketides: computational assignment of absolute configuration and its relationship with phytotoxic activity. Eur J Org Chem 5564-5570.
-
(2011)
Eur J Org Chem
, pp. 5564-5570
-
-
Evidente, A.1
Superchi, S.2
Cimmino, A.3
Mazzeo, G.4
Mugnai, L.5
Rubiales, D.6
Andolfi, A.7
Villegas-Fernández, A.M.8
-
19
-
-
0036380729
-
Freshwater ascomycetes: new or noteworthy species from north temperate lakes in Wisconsin
-
Fallah PM, Shearer CA. 2001. Freshwater ascomycetes: new or noteworthy species from north temperate lakes in Wisconsin. Mycologia 93:566-602, doi:10.2307/3761741
-
(2001)
Mycologia
, vol.93
, pp. 566-602
-
-
Fallah, P.M.1
Shearer, C.A.2
-
20
-
-
84945934576
-
Confidence intervals on phylogenies: an approach using bootstrap
-
Felsenstein J. 1980. Confidence intervals on phylogenies: an approach using bootstrap. Evolution 39:1792-1797.
-
(1980)
Evolution
, vol.39
, pp. 1792-1797
-
-
Felsenstein, J.1
-
21
-
-
79955955584
-
Minutisphaera and Natipusilla: two new genera of freshwater Dothideomycetes
-
Ferrer A, Miller AN, Shearer CA. 2011. Minutisphaera and Natipusilla: two new genera of freshwater Dothideomycetes. Mycologia 103:411-423, doi:10.3852/10-177
-
(2011)
Mycologia
, vol.103
, pp. 411-423
-
-
Ferrer, A.1
Miller, A.N.2
Shearer, C.A.3
-
22
-
-
0027580147
-
ITS primers with enhanced specificity for Basidiomycetes-application to the identification of mycorrhizae and rusts
-
Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for Basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118, doi:10.1111/j.1365-294X.1993.tb00005.x
-
(1993)
Mol Ecol
, vol.2
, pp. 113-118
-
-
Gardes, M.1
Bruns, T.D.2
-
23
-
-
74549125386
-
SeaView 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
Gouy M, Guindon S, Gascuel O. 2010. SeaView 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27: 221-224, doi:10.1093/molbev/msp259
-
(2010)
Mol Biol Evol
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
24
-
-
84876439975
-
Structure of diversity in dark septate endophytes: from species to genes
-
Pirttila AM, Frank AC, eds. Springer
-
Grunig CR, Queloz V, Sieber TN. 2011. Structure of diversity in dark septate endophytes: from species to genes. In: Pirttila AM, Frank AC, eds. Endophytes of forest trees: biology and applications. Springer. p 3-30.
-
(2011)
Endophytes of forest trees: biology and applications
, pp. 3-30
-
-
Grunig, C.R.1
Queloz, V.2
Sieber, T.N.3
-
26
-
-
12044253190
-
An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
-
Hillis DM, Bull JJ. 1993. An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42:182-192, doi:10.1093/sysbio/42.2.182
-
(1993)
Syst Biol
, vol.42
, pp. 182-192
-
-
Hillis, D.M.1
Bull, J.J.2
-
27
-
-
77954739362
-
A molecular phylogenetic assessment of Massarina ingoldiana sensu lato
-
Hirayama K, Tanaka K, Raja HA, Miller AN, Shearer CA. 2010. A molecular phylogenetic assessment of Massarina ingoldiana sensu lato. Mycologia 102:729-746, http::10.3852/09-230
-
(2010)
Mycologia
, vol.102
, pp. 729-746
-
-
Hirayama, K.1
Tanaka, K.2
Raja, H.A.3
Miller, A.N.4
Shearer, C.A.5
-
29
-
-
0034849408
-
MrBayes: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP. Ronquist F. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755, doi:10.1093/bioinformatics/17.8.754
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
30
-
-
84891605962
-
Families of Dothideomycetes
-
Hyde KD, Jones EBG, Liu JK, Ariyawansa H, Boehm E, Boonmee S, Braun U, Chomnunti P, Crous PW, Dai DQ, Diederich P, Dissanayake A, Doilom M, Doveri F, Hongsanan S, Jayawardena R, Lawrey JD, Li YM, Liu YX, Lücking R, Monkai J, Muggia L, Nelsen MP, Pang KL, Phookamsak R, Senanayake IC, Shearer CA, Suetrong S, Tanaka K, Thambugala KM, Wijayawardene NN, Wikee S, Wu HX, Zhang Y, Aguirre-Hudson B, Alias SA, Aptroot A, Bahkali AH, Bezerra JL, Bhat DJ, Camporesi E, Chukeatirote E, Gueidan C, Hawksworth DL, Hirayama K, De Hoog S, Kang JC, Knudsen K, Li WJ, Li XH, Liu ZY, Mapook A, McKenzie EHC, Miller AN, Mortimer PE, Phillips AJL, Raja HA, Scheuer C, Schumm F, Taylor JE, Tian Q, Tibpromma S, Wanasinghe DN, Wang Y, Xu JC, Yacharoen S, Yan JY, Zhang M. 2013. Families of Dothideomycetes. Fungal Divers 63:1-313, doi:10.1007/s13225-013-0263-4
-
(2013)
Fungal Divers
, vol.63
, pp. 1-313
-
-
Hyde, K.D.1
Jones, E.B.G.2
Liu, J.K.3
Ariyawansa, H.4
Boehm, E.5
Boonmee, S.6
Braun, U.7
Chomnunti, P.8
Crous, P.W.9
Dai, D.Q.10
Diederich, P.11
Dissanayake, A.12
Doilom, M.13
Doveri, F.14
Hongsanan, S.15
Jayawardena, R.16
Lawrey, J.D.17
Li, Y.M.18
Liu, Y.X.19
Lücking, R.20
Monkai, J.21
Muggia, L.22
Nelsen, M.P.23
Pang, K.L.24
Phookamsak, R.25
Senanayake, I.C.26
Shearer, C.A.27
Suetrong, S.28
Tanaka, K.29
Thambugala, K.M.30
Wijayawardene, N.N.31
Wikee, S.32
Wu, H.X.33
Zhang, Y.34
Aguirre-Hudson, B.35
Alias, S.A.36
Aptroot, A.37
Bahkali, A.H.38
Bezerra, J.L.39
Bhat, D.J.40
Camporesi, E.41
Chukeatirote, E.42
Gueidan, C.43
Hawksworth, D.L.44
Hirayama, K.45
De Hoog, S.46
Kang, J.C.47
Knudsen, K.48
Li, W.J.49
Li, X.H.50
Liu, Z.Y.51
Mapook, A.52
McKenzie, E.H.C.53
Miller, A.N.54
Mortimer, P.E.55
Phillips, A.J.L.56
Raja, H.A.57
Scheuer, C.58
Schumm, F.59
Taylor, J.E.60
Tian, Q.61
Tibpromma, S.62
Wanasinghe, D.N.63
Wang, Y.64
Xu, J.C.65
Yacharoen, S.66
Yan, J.Y.67
Zhang, M.68
more..
-
31
-
-
0002733792
-
Aliquandostipitaceae, a new family for two new tropical ascomycetes with unusually wide hyphae and dimorphic ascomata
-
Inderbitzin P, Landvik S, Abdel-Wahab MA, Berbee ML. 2001. Aliquandostipitaceae, a new family for two new tropical ascomycetes with unusually wide hyphae and dimorphic ascomata. Am J Bot 88:52-61, doi:10.2307/2657126
-
(2001)
Am J Bot
, vol.88
, pp. 52-61
-
-
Inderbitzin, P.1
Landvik, S.2
Abdel-Wahab, M.A.3
Berbee, M.L.4
-
32
-
-
84857917948
-
Surprising spectra of rootassociated fungi in submerged aquatic plants
-
Kohout P, Sykorova Z, Ctvrtlikova M, Rydlova J, Suda J, Vohnik M, Sudova R. 2012. Surprising spectra of rootassociated fungi in submerged aquatic plants. FEMS Microbiol Ecol 80:216-235, http::10.1111/j.1574-6941.2011.01291.x
-
(2012)
FEMS Microbiol Ecol
, vol.80
, pp. 216-235
-
-
Kohout, P.1
Sykorova, Z.2
Ctvrtlikova, M.3
Rydlova, J.4
Suda, J.5
Vohnik, M.6
Sudova, R.7
-
33
-
-
32044471897
-
Assembling the fungal tree of life: progress, classification and evolution of subcellular traits
-
Lutzoni F, Kauff F, Cox CJ, McLaughlin D, Celio G, Dentinger C, Padamsee M, Hibbett D, James TY, Baloch E, Grube M, Reeb V, Hofstetter V, Schoch C, Arnold AE, Miadlikowska J, Spatafora J, Johnson D, Hambleton S, Crockett M, Shoemaker R, Sung GH, Lücking R, Lumbsch T, O'Donnell K, Binder M, Diederich P, Ertz D, Gueidan C, Hansen K, Harris RC, Hosaka K, Lim YW, Matheny B, Nishida H, Pfister D, Rogers J, Rossman A, Schmitt I, Sipman H, Stone J, Sugiyama J, Yahr R, Vilgalys R. 2004. Assembling the fungal tree of life: progress, classification and evolution of subcellular traits. Am J Bot 91:1446-1480, doi:10.3732/ajb.91.10.1446
-
(2004)
Am J Bot
, vol.91
, pp. 1446-1480
-
-
Lutzoni, F.1
Kauff, F.2
Cox, C.J.3
McLaughlin, D.4
Celio, G.5
Dentinger, C.6
Padamsee, M.7
Hibbett, D.8
James, T.Y.9
Baloch, E.10
Grube, M.11
Reeb, V.12
Hofstetter, V.13
Schoch, C.14
Arnold, A.E.15
Miadlikowska, J.16
Spatafora, J.17
Johnson, D.18
Hambleton, S.19
Crockett, M.20
Shoemaker, R.21
Sung, G.H.22
Lücking, R.23
Lumbsch, T.24
O'Donnell, K.25
Binder, M.26
Diederich, P.27
Ertz, D.28
Gueidan, C.29
Hansen, K.30
Harris, R.C.31
Hosaka, K.32
Lim, Y.W.33
Matheny, B.34
Nishida, H.35
Pfister, D.36
Rogers, J.37
Rossman, A.38
Schmitt, I.39
Sipman, H.40
Stone, J.41
Sugiyama, J.42
Yahr, R.43
Vilgalys, R.44
more..
-
34
-
-
14144255695
-
Multigene phylogenies indicate ascomal wall morphology is a better predictor of phylogenetic relationships than ascospore morphology in the Sordariales (Ascomycota, Fungi)
-
Miller AN, Huhndorf SM. 2005. Multigene phylogenies indicate ascomal wall morphology is a better predictor of phylogenetic relationships than ascospore morphology in the Sordariales (Ascomycota, Fungi). Mol Phyl Evol 35:60-75, http::10.1016/j.ympev.2005.01.007
-
(2005)
Mol Phyl Evol
, vol.35
, pp. 60-75
-
-
Miller, A.N.1
Huhndorf, S.M.2
-
35
-
-
78751558547
-
Creating the CIPRES science gateway for inference of large phylogenetic trees
-
14 Nov 2010, New Orleans, Louisiana
-
Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES science gateway for inference of large phylogenetic trees., Proceedings of the Gateway computing environments workshop (GCE): 14 Nov 2010, p 1-8, New Orleans, Louisiana.
-
(2010)
Proceedings of the Gateway computing environments workshop (GCE)
, pp. 1-8
-
-
Miller, M.A.1
Pfeiffer, W.2
Schwartz, T.3
-
36
-
-
84919844120
-
The past, present and future of secondary metabolite research in the Dothideomycetes
-
Muria-Gonzalez MJ, Chooi Y-H, Breen S, Solomon PS. 2014. The past, present and future of secondary metabolite research in the Dothideomycetes. Mol Plant Pathol 16: 92-107, doi:10.1111/mpp.2015.16.issue-1
-
(2014)
Mol Plant Pathol
, vol.16
, pp. 92-107
-
-
Muria-Gonzalez, M.J.1
Chooi, Y.-H.2
Breen, S.3
Solomon, P.S.4
-
37
-
-
39149141072
-
AWTY (Are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
-
Nylander JA, Wilgenbusch JC, Warren DL, Swofford DL. 2008. AWTY (Are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24:581-583, doi:10.1093/bioinformatics/btm388
-
(2008)
Bioinformatics
, vol.24
, pp. 581-583
-
-
Nylander, J.A.1
Wilgenbusch, J.C.2
Warren, D.L.3
Swofford, D.L.4
-
38
-
-
0013768663
-
The stereospecific cyclolization of N-(a-hydroxyacyl)-phenylalanyl-proline lactams
-
Ott H, Frey AJ, Hofmann A. 1963. The stereospecific cyclolization of N-(a-hydroxyacyl)-phenylalanyl-proline lactams. Tetrahedron 19:1675-1684, doi:10.1016/S0040-4020(01)99240-3
-
(1963)
Tetrahedron
, vol.19
, pp. 1675-1684
-
-
Ott, H.1
Frey, A.J.2
Hofmann, A.3
-
39
-
-
9644301241
-
Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and bayesian approaches over likelihood ratio tes
-
Posada D, Buckley TR. 2004. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and bayesian approaches over likelihood ratio tests. Syst Biol 53: 793-808, doi:10.1080/10635150490522304.
-
(2004)
Syst Biol
, vol.53
, pp. 793-808
-
-
Posada, D.1
Buckley, T.R.2
-
40
-
-
77954710916
-
Three new species of Acanthostigma (Tubeufiaceae, Dothideomycetes) from Great Smoky Mountains National Park
-
Promputtha I, Miller AN. 2010. Three new species of Acanthostigma (Tubeufiaceae, Dothideomycetes) from Great Smoky Mountains National Park. Mycologia 102: 574-587, doi:10.3852/09-051
-
(2010)
Mycologia
, vol.102
, pp. 574-587
-
-
Promputtha, I.1
Miller, A.N.2
-
41
-
-
84903640119
-
Lindgomyces angustiascus (Lindgomycetaceae, Pleosporales, Dothideomycetes), a new lignicolous species from freshwater habitats in USA
-
Raja HA, Oberlies NH, El-Elimat T, Miller AN, Zelski SE, Shearer CA. 2013a. Lindgomyces angustiascus (Lindgomycetaceae, Pleosporales, Dothideomycetes), a new lignicolous species from freshwater habitats in USA. Mycoscience 54:353-361, http::10.1016/j.myc.2012.12.004
-
(2013)
Mycoscience
, vol.54
, pp. 353-361
-
-
Raja, H.A.1
Oberlies, N.H.2
El-Elimat, T.3
Miller, A.N.4
Zelski, S.E.5
Shearer, C.A.6
-
42
-
-
84881469341
-
Freshwater ascomycetes: Minutisphaera (Dothideomycetes) revisited, including one new species from Japan
-
Raja HA, Oberlies NH, Figueroa M, Tanaka K, Hirayama K, Hashimoto A, Miller AN, Zelski SE, Shearer CA. 2013b. Freshwater ascomycetes: Minutisphaera (Dothideomycetes) revisited, including one new species from Japan. Mycologia 105:959-976, doi:10.3852/12-313
-
(2013)
Mycologia
, vol.105
, pp. 959-976
-
-
Raja, H.A.1
Oberlies, N.H.2
Figueroa, M.3
Tanaka, K.4
Hirayama, K.5
Hashimoto, A.6
Miller, A.N.7
Zelski, S.E.8
Shearer, C.A.9
-
43
-
-
84856945697
-
Testing the phylogenetic utility of MCM7 in the Ascomycota
-
Raja HA, Schoch CL, Hustad VP, Shearer CA, Miller AN. 2011. Testing the phylogenetic utility of MCM7 in the Ascomycota. Mycokeys 1:63-94, doi:10.3897/mycokeys.1.1966
-
(2011)
Mycokeys
, vol.1
, pp. 63-94
-
-
Raja, H.A.1
Schoch, C.L.2
Hustad, V.P.3
Shearer, C.A.4
Miller, A.N.5
-
44
-
-
52649165547
-
Freshwater ascomycetes: new and noteworthy species from aquatic habitats in Florida
-
Raja HA, Shearer CA. 2008. Freshwater ascomycetes: new and noteworthy species from aquatic habitats in Florida. Mycologia 100:467-489, doi:10.3852/07-167R
-
(2008)
Mycologia
, vol.100
, pp. 467-489
-
-
Raja, H.A.1
Shearer, C.A.2
-
45
-
-
77950344722
-
Freshwater ascomycetes: Alascospora evergladensis, a new genus and species from the Florida Everglades
-
Raja HA, Violi HA, Shearer CA. 2010. Freshwater ascomycetes: Alascospora evergladensis, a new genus and species from the Florida Everglades. Mycologia 102: 33-38, doi:10.3852/09-096
-
(2010)
Mycologia
, vol.102
, pp. 33-38
-
-
Raja, H.A.1
Violi, H.A.2
Shearer, C.A.3
-
47
-
-
0000179255
-
Molecular systematics of the Hypocreales-a teleomorph gene phylogeny and the status of their anamorphs
-
Rehner SA, Samuels GJ. (1995) Molecular systematics of the Hypocreales-a teleomorph gene phylogeny and the status of their anamorphs. Can J Bot 73:S816-S823, doi:10.1139/b95-327.
-
(1995)
Can J Bot
, vol.73
, pp. S816-S823
-
-
Rehner, S.A.1
Samuels, G.J.2
-
48
-
-
75149170450
-
New primers for promising single-copy genes in fungal phylogenetics and systematics
-
Schmitt I, Crespo A, Divakar PK, Fankhauser JD, HermanSackett E, Kalb K, Nelsen MP, Nelson NA, Rivas-Plata E, Shimp AD, Widhelm T, Lumbsch HT. 2009. New primers for promising single-copy genes in fungal phylogenetics and systematics. Persoonia 23:35-40, doi:10.3767/003158509X470602
-
(2009)
Persoonia
, vol.23
, pp. 35-40
-
-
Schmitt, I.1
Crespo, A.2
Divakar, P.K.3
Fankhauser, J.D.4
HermanSackett, E.5
Kalb, K.6
Nelsen, M.P.7
Nelson, N.A.8
Rivas-Plata, E.9
Shimp, A.D.10
Widhelm, T.11
Lumbsch, H.T.12
-
49
-
-
77954765891
-
A classwide phylogenetic assessment of Dothideomycetes
-
Schoch CL, Crous PW, Groenewald JZ, Boehm EWA, Burgess TI, de Gruyter J, de Hoog GS, Dixon LJ, Grube M, Gueidan C, Harada Y, Hatakeyama S, Hirayama K, Hosoya T, Huhndorf SM, Hyde KD, Jones EBG, Kohlmeyer J, Kruys A °, Li YM, Lü cking R, Lumbsch HT, Marvanová L, Mbatchou JS, McVay AH, Miller AN, Mugambi GK, Muggia L, Nelsen MP, Nelson P, Owensby CA, Phillips AJL, Phongpaichit S, Pointing SB, Pujade-Renaud V, Raja HA, Plata ER, Robbertse B, Ruibal C, Sakayaroj J, Sano T, Selbmann L, Shearer CA, Shirouzu T, Slippers B, Suetrong S, Tanaka K, Volkmann-Kohlmeyer B, Wingfield MJ, Wood AR, Woudenberg JHC, Yonezawa H, Zhang Y, Spatafora JW. 2009. A classwide phylogenetic assessment of Dothideomycetes. Stud Mycol 64:1-15, doi:10.3114/sim.2009.64.01
-
(2009)
Stud Mycol
, vol.64
, pp. 1-15
-
-
Schoch, C.L.1
Crous, P.W.2
Groenewald, J.Z.3
Boehm, E.W.A.4
Burgess, T.I.5
de Gruyter, J.6
de Hoog, G.S.7
Dixon, L.J.8
Grube, M.9
Gueidan, C.10
Harada, Y.11
Hatakeyama, S.12
Hirayama, K.13
Hosoya, T.14
Huhndorf, S.M.15
Hyde, K.D.16
Jones, E.B.G.17
Kohlmeyer, J.18
Kruys, Å.19
Li, Y.M.20
Lücking, R.21
Lumbsch, H.T.22
Marvanová, L.23
Mbatchou, J.S.24
McVay, A.H.25
Miller, A.N.26
Mugambi, G.K.27
Muggia, L.28
Nelsen, M.P.29
Nelson, P.30
Owensby, C.A.31
Phillips, A.J.L.32
Phongpaichit, S.33
Pointing, S.B.34
Pujade-Renaud, V.35
Raja, H.A.36
Plata, E.R.37
Robbertse, B.38
Ruibal, C.39
Sakayaroj, J.40
Sano, T.41
Selbmann, L.42
Shearer, C.A.43
Shirouzu, T.44
Slippers, B.45
Suetrong, S.46
Tanaka, K.47
Volkmann-Kohlmeyer, B.48
Wingfield, M.J.49
Wood, A.R.50
Woudenberg, J.H.C.51
Yonezawa, H.52
Zhang, Y.53
Spatafora, J.W.54
more..
-
50
-
-
84924853303
-
Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi
-
Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, de Beer ZW, Dentinger BTM, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge Z-W, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong S-B, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson K-H, Leavitt S, Letcher PM, Liimatainen K, Liu J-K, Lodge DJ, Jennifer Luangsaard J, Lumbsch HT, Maharachchikumbura SSN, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh S-O, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang W-Y, Federhen S. 2014. Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi. Database 2014.
-
(2014)
Database 2014
-
-
Schoch, C.L.1
Robbertse, B.2
Robert, V.3
Vu, D.4
Cardinali, G.5
Irinyi, L.6
Meyer, W.7
Nilsson, R.H.8
Hughes, K.9
Miller, A.N.10
Kirk, P.M.11
Abarenkov, K.12
Aime, M.C.13
Ariyawansa, H.A.14
Bidartondo, M.15
Boekhout, T.16
Buyck, B.17
Cai, Q.18
Chen, J.19
Crespo, A.20
Crous, P.W.21
Damm, U.22
de Beer, Z.W.23
Dentinger, B.T.M.24
Divakar, P.K.25
Dueñas, M.26
Feau, N.27
Fliegerova, K.28
García, M.A.29
Ge, Z.-W.30
Griffith, G.W.31
Groenewald, J.Z.32
Groenewald, M.33
Grube, M.34
Gryzenhout, M.35
Gueidan, C.36
Guo, L.37
Hambleton, S.38
Hamelin, R.39
Hansen, K.40
Hofstetter, V.41
Hong, S.-B.42
Houbraken, J.43
Hyde, K.D.44
Inderbitzin, P.45
Johnston, P.R.46
Karunarathna, S.C.47
Kõljalg, U.48
more..
-
51
-
-
84859972408
-
Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
-
Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W, Fungal Barcoding Consortium. 2012. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. PNAS 109:6241-6246, http::10.1073/pnas.1117018109
-
(2012)
PNAS
, vol.109
, pp. 6241-6246
-
-
Schoch, C.L.1
Seifert, K.A.2
Huhndorf, S.3
Robert, V.4
Spouge, J.L.5
Levesque, C.A.6
Chen, W.7
-
52
-
-
40349096306
-
Out of the rivers: Are some aquatic hyphomycetes plant endophytes?
-
Selosse MA, Vohnik M, Chauvet E. 2008. Out of the rivers: Are some aquatic hyphomycetes plant endophytes? New Phytol, 178:3-7.
-
(2008)
New Phytol
, vol.178
, pp. 3-7
-
-
Selosse, M.A.1
Vohnik, M.2
Chauvet, E.3
-
53
-
-
84941616542
-
Fungi in freshwater habitats
-
Mueller GM, Bills GF, Foster MS, eds. Washington, D.C: Smithsonian Institution Press
-
Shearer CA, Langsam DM, Longcore JE. 2004. Fungi in freshwater habitats. In: Mueller GM, Bills GF, Foster MS, eds. Measuring and monitoring biological diversity: standard methods for Fungi. Washington, D.C: Smithsonian Institution Press. p 513-531.
-
(2004)
Measuring and monitoring biological diversity: standard methods for Fungi
, pp. 513-531
-
-
Shearer, C.A.1
Langsam, D.M.2
Longcore, J.E.3
-
54
-
-
84945946992
-
Phylogeny of the Dothideomycetes and other classes of freshwater fissitunicate Ascomycota
-
Gareth EBG, Hyde KD, Pang KL, eds. Berlin, Boston: de Gruyter
-
Shearer CA, Pang KL, Suetrong S, Raja HA. 2014. Phylogeny of the Dothideomycetes and other classes of freshwater fissitunicate Ascomycota. In: Gareth EBG, Hyde KD, Pang KL, eds. Freshwater fungi and fungal-like organisms. Berlin, Boston: de Gruyter. p 25-46.
-
(2014)
Freshwater fungi and fungal-like organisms
, pp. 25-46
-
-
Shearer, C.A.1
Pang, K.L.2
Suetrong, S.3
Raja, H.A.4
-
56
-
-
77954780974
-
The molecular phylogeny of freshwater Dothideomycetes
-
Shearer CA, Raja HA. Miller AN, Nelson P, Tanaka K, Hirayama K, Marvanova L, Hyde KD, Zhang Y. 2009. The molecular phylogeny of freshwater Dothideomycetes. Stud Mycol 145-153.
-
(2009)
Stud Mycol
, pp. 145-153
-
-
Shearer, C.A.1
Raja, H.A.2
Miller, A.N.3
Nelson, P.4
Tanaka, K.5
Hirayama, K.6
Marvanova, L.7
Hyde, K.D.8
Zhang, Y.9
-
57
-
-
53549129355
-
Extracellular enzymes and soft rot decay: Are ascomycetes important degraders in freshwater?
-
Simonis JL, Raja HA, Shearer CA. 2008. Extracellular enzymes and soft rot decay: Are ascomycetes important degraders in freshwater? Fungal Divers, 31:135-146.
-
(2008)
Fungal Divers
, vol.31
, pp. 135-146
-
-
Simonis, J.L.1
Raja, H.A.2
Shearer, C.A.3
-
58
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed mode
-
Stamatakis A. 2006. RAxML-VI-HPC: Maximum likelihoodbased phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690, doi:10.1093/bioinformatics/btl446
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
59
-
-
84856889971
-
A taxonomic revision and phylogenetic reconstruction of the Jahnulales (Dothideomycetes) and the new family, Manglicolaceae
-
Suetrong S, Boonyuen N, Pang KL, Ueapattanakit J, Klaysuban A, Sri-Indrasutdhi V, Sivichai S, Jones EBG. 2011. A taxonomic revision and phylogenetic reconstruction of the Jahnulales (Dothideomycetes) and the new family, Manglicolaceae. Fungal Divers 51:163-188, doi:10.1007/s13225-011-0138-5
-
(2011)
Fungal Divers
, vol.51
, pp. 163-188
-
-
Suetrong, S.1
Boonyuen, N.2
Pang, K.L.3
Ueapattanakit, J.4
Klaysuban, A.5
Sri-Indrasutdhi, V.6
Sivichai, S.7
Jones, E.B.G.8
-
61
-
-
84891387304
-
Evaluation of culture media for the production of secondary metabolites in a natural products screening program
-
Vandermolen KM, Raja HA, El-Elimat T, Oberlies NH. 2013. Evaluation of culture media for the production of secondary metabolites in a natural products screening program. AMB Express 3:71, doi:10.1186/2191-0855-3-71.
-
(2013)
AMB Express
, vol.3
, pp. 71
-
-
Vandermolen, K.M.1
Raja, H.A.2
El-Elimat, T.3
Oberlies, N.H.4
-
62
-
-
0025374564
-
Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species
-
Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4238-4246.
-
(1990)
J Bacteriol
, vol.172
, pp. 4238-4246
-
-
Vilgalys, R.1
Hester, M.2
-
63
-
-
0000432452
-
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
-
Innis MA, Gefland, DH, Sninsky JJ, White TJ, eds San Diego, California: Academic Press
-
White TJ, Bruns TD, Lee SH, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gefland, DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and application San Diego, California: Academic Press. p 315-322.
-
(1990)
PCR protocols: a guide to methods and application
, pp. 315-322
-
-
White, T.J.1
Bruns, T.D.2
Lee, S.H.3
Taylor, J.W.4
-
64
-
-
67649655781
-
Proline-containing dipeptides from a marine sponge of a Callyspongia species
-
Yang B, Dong J, Zhou X, Yang X, Kyung JL, Wang L, Zhang S, Liu Y. 2009. Proline-containing dipeptides from a marine sponge of a Callyspongia species. Helv Chim Acta 92:1112-1117, doi:10.1002/hlca.v92:6
-
(2009)
Helv Chim Acta
, vol.92
, pp. 1112-1117
-
-
Yang, B.1
Dong, J.2
Zhou, X.3
Yang, X.4
Kyung, J.L.5
Wang, L.6
Zhang, S.7
Liu, Y.8
-
65
-
-
84863116452
-
Pleosporales
-
Zhang Y, Crous PW, Schoch CL, Hyde KD. 2012. Pleosporales. Fungal Divers 53:1-221, doi:10.1007/s13225-011-0117-x
-
(2012)
Fungal Divers
, vol.53
, pp. 1-221
-
-
Zhang, Y.1
Crous, P.W.2
Schoch, C.L.3
Hyde, K.D.4
|