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Volumn 33, Issue 10, 2015, Pages 2925-2935

MiRNA-Mediated Regulation of the SWI/SNF Chromatin Remodeling Complex Controls Pluripotency and Endodermal Differentiation in Human ESCs

Author keywords

BAF170; Cell differentiation; Chromatin; Embryonic stem cells; MicroRNAs

Indexed keywords

BRG1 PROTEIN; MICRORNA; MICRORNA 302; PROTEIN SWI; TRANSCRIPTION FACTOR SNF; UNCLASSIFIED DRUG; ACTIN; ACTL6A PROTEIN, HUMAN; CHROMATIN; DNA BINDING PROTEIN; DNA HELICASE; MIRN302 MICRORNA, HUMAN; NONHISTONE PROTEIN; NUCLEAR PROTEIN; SMARCA4 PROTEIN, HUMAN; SMARCC2 PROTEIN, HUMAN; SWI-SNF-B CHROMATIN-REMODELING COMPLEX; TRANSCRIPTION FACTOR;

EID: 84942345980     PISSN: 10665099     EISSN: 15494918     Source Type: Journal    
DOI: 10.1002/stem.2084     Document Type: Article
Times cited : (23)

References (41)
  • 1
    • 0036776747 scopus 로고    scopus 로고
    • Prospects for stem cell therapeutics: Myths and medicines
    • Daley GQ,. Prospects for stem cell therapeutics: Myths and medicines. Curr Opin Genet Dev 2002; 12: 607-613.
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 607-613
    • Daley, G.Q.1
  • 2
    • 25144525014 scopus 로고    scopus 로고
    • Core transcriptional regulatory circuitry in human embryonic stem cells
    • Boyer LA, Lee TI, Cole MF, et al., Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 2005; 122: 947-956.
    • (2005) Cell , vol.122 , pp. 947-956
    • Boyer, L.A.1    Lee, T.I.2    Cole, M.F.3
  • 3
    • 77957970498 scopus 로고    scopus 로고
    • Epigenetic modifications in pluripotent and differentiated cells
    • Meissner A,. Epigenetic modifications in pluripotent and differentiated cells. Nat Biotechnol 2010; 28: 1079-1088.
    • (2010) Nat Biotechnol , vol.28 , pp. 1079-1088
    • Meissner, A.1
  • 4
    • 0037131389 scopus 로고    scopus 로고
    • "stemness": Transcriptional profiling of embryonic and adult stem cells
    • Ramalho-Santos M, Yoon S, Matsuzaki Y, et al., "Stemness": Transcriptional profiling of embryonic and adult stem cells. Science 2002; 298: 597-600.
    • (2002) Science , vol.298 , pp. 597-600
    • Ramalho-Santos, M.1    Yoon, S.2    Matsuzaki, Y.3
  • 5
    • 29744447772 scopus 로고    scopus 로고
    • Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells
    • Meshorer E, Yellajoshula D, George E, et al., Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. Dev Cell 2006; 10: 105-116.
    • (2006) Dev Cell , vol.10 , pp. 105-116
    • Meshorer, E.1    Yellajoshula, D.2    George, E.3
  • 6
    • 79958252915 scopus 로고    scopus 로고
    • Chromatin connections to pluripotency and cellular reprogramming
    • Orkin SH, Hochedlinger K,. Chromatin connections to pluripotency and cellular reprogramming. Cell 2011; 145: 835-850.
    • (2011) Cell , vol.145 , pp. 835-850
    • Orkin, S.H.1    Hochedlinger, K.2
  • 7
    • 11144223157 scopus 로고    scopus 로고
    • Conserved and divergent paths that regulate self-renewal in mouse and human embryonic stem cells
    • Rao M,. Conserved and divergent paths that regulate self-renewal in mouse and human embryonic stem cells. Dev Biol 2004; 275: 269-286.
    • (2004) Dev Biol , vol.275 , pp. 269-286
    • Rao, M.1
  • 8
    • 13844294261 scopus 로고    scopus 로고
    • Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing
    • Kanellopoulou C, Muljo SA, Kung AL, et al., Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing. Genes Dev 2005; 19: 489-501.
    • (2005) Genes Dev , vol.19 , pp. 489-501
    • Kanellopoulou, C.1    Muljo, S.A.2    Kung, A.L.3
  • 9
    • 0042442335 scopus 로고    scopus 로고
    • Embryonic stem cell-specific MicroRNAs
    • Houbaviy HB, Murray MF, Sharp PA,. Embryonic stem cell-specific MicroRNAs. Dev Cell 2003; 5: 351-358.
    • (2003) Dev Cell , vol.5 , pp. 351-358
    • Houbaviy, H.B.1    Murray, M.F.2    Sharp, P.A.3
  • 10
    • 2942534403 scopus 로고    scopus 로고
    • Human embryonic stem cells express a unique set of microRNAs
    • Suh MR, Lee Y, Kim JY, et al., Human embryonic stem cells express a unique set of microRNAs. Dev Biol 2004; 270: 488-498.
    • (2004) Dev Biol , vol.270 , pp. 488-498
    • Suh, M.R.1    Lee, Y.2    Kim, J.Y.3
  • 11
    • 53549133376 scopus 로고    scopus 로고
    • Oct4/Sox2-regulated miR-302 targets cyclin D1 in human embryonic stem cells
    • Card DA, Hebbar PB, Li L, et al., Oct4/Sox2-regulated miR-302 targets cyclin D1 in human embryonic stem cells. Mol Cell Biol 2008; 28: 6426-6438.
    • (2008) Mol Cell Biol , vol.28 , pp. 6426-6438
    • Card, D.A.1    Hebbar, P.B.2    Li, L.3
  • 12
    • 56749091922 scopus 로고    scopus 로고
    • Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation
    • Wang Y, Baskerville S, Shenoy A, et al., Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation. Nat Genet 2008; 40: 1478-1483.
    • (2008) Nat Genet , vol.40 , pp. 1478-1483
    • Wang, Y.1    Baskerville, S.2    Shenoy, A.3
  • 13
    • 79955649501 scopus 로고    scopus 로고
    • The Nodal inhibitor Lefty is negatively modulated by the microRNA miR-302 in human embryonic stem cells
    • Barroso-delJesus A, Lucena-Aguilar G, Sanchez L, et al., The Nodal inhibitor Lefty is negatively modulated by the microRNA miR-302 in human embryonic stem cells. FASEB J 2011; 25: 1497-1508.
    • (2011) FASEB J , vol.25 , pp. 1497-1508
    • Barroso-DelJesus, A.1    Lucena-Aguilar, G.2    Sanchez, L.3
  • 14
    • 80054731685 scopus 로고    scopus 로고
    • Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response
    • Lipchina I, Elkabetz Y, Hafner M, et al., Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. Genes Dev 2011; 25: 2173-2186.
    • (2011) Genes Dev , vol.25 , pp. 2173-2186
    • Lipchina, I.1    Elkabetz, Y.2    Hafner, M.3
  • 15
    • 79957855262 scopus 로고    scopus 로고
    • Reprogramming of mouse and human cells to pluripotency using mature microRNAs
    • Miyoshi N, Ishii H, Nagano H, et al., Reprogramming of mouse and human cells to pluripotency using mature microRNAs. Cell Stem Cell 2011; 8: 633-638.
    • (2011) Cell Stem Cell , vol.8 , pp. 633-638
    • Miyoshi, N.1    Ishii, H.2    Nagano, H.3
  • 16
    • 79953881831 scopus 로고    scopus 로고
    • Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency
    • Anokye-Danso F, Trivedi CM, Juhr D, et al., Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency. Cell Stem Cell 2011; 8: 376-388.
    • (2011) Cell Stem Cell , vol.8 , pp. 376-388
    • Anokye-Danso, F.1    Trivedi, C.M.2    Juhr, D.3
  • 17
    • 78650996389 scopus 로고    scopus 로고
    • Reprogramming factor expression initiates widespread targeted chromatin remodeling
    • Koche RP, Smith ZD, Adli M, et al., Reprogramming factor expression initiates widespread targeted chromatin remodeling. Cell Stem Cell 2011; 8: 96-105.
    • (2011) Cell Stem Cell , vol.8 , pp. 96-105
    • Koche, R.P.1    Smith, Z.D.2    Adli, M.3
  • 18
    • 78049378982 scopus 로고    scopus 로고
    • Chromatin regulatory mechanisms in pluripotency
    • Lessard JA, Crabtree GR,. Chromatin regulatory mechanisms in pluripotency. Annu Rev Cell Dev Biol 2010; 26: 503-532.
    • (2010) Annu Rev Cell Dev Biol , vol.26 , pp. 503-532
    • Lessard, J.A.1    Crabtree, G.R.2
  • 19
    • 0028093378 scopus 로고
    • Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex
    • Kwon H, Imbalzano AN, Khavari PA, et al., Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex. Nature 1994; 370: 477-481.
    • (1994) Nature , vol.370 , pp. 477-481
    • Kwon, H.1    Imbalzano, A.N.2    Khavari, P.A.3
  • 20
    • 26444528938 scopus 로고    scopus 로고
    • Regulating SWI/SNF subunit levels via protein-protein interactions and proteasomal degradation: BAF155 and BAF170 limit expression of BAF57
    • Chen J, Archer TK,. Regulating SWI/SNF subunit levels via protein-protein interactions and proteasomal degradation: BAF155 and BAF170 limit expression of BAF57. Mol Cell Biol 2005; 25: 9016-9027.
    • (2005) Mol Cell Biol , vol.25 , pp. 9016-9027
    • Chen, J.1    Archer, T.K.2
  • 21
    • 78149270783 scopus 로고    scopus 로고
    • Ubiquitin-dependent and ubiquitin-independent control of subunit stoichiometry in the SWI/SNF complex
    • Keppler BR, Archer TK,. Ubiquitin-dependent and ubiquitin-independent control of subunit stoichiometry in the SWI/SNF complex. J Biol Chem 2010; 285: 35665-35674.
    • (2010) J Biol Chem , vol.285 , pp. 35665-35674
    • Keppler, B.R.1    Archer, T.K.2
  • 22
    • 0029787059 scopus 로고    scopus 로고
    • Diversity and specialization of mammalian SWI/SNF complexes
    • Wang W, Xue Y, Zhou S, et al., Diversity and specialization of mammalian SWI/SNF complexes. Genes Dev 1996; 10: 2117-2130.
    • (1996) Genes Dev , vol.10 , pp. 2117-2130
    • Wang, W.1    Xue, Y.2    Zhou, S.3
  • 23
    • 79952539053 scopus 로고    scopus 로고
    • ATP-dependent chromatin remodeling: Genetics, genomics and mechanisms
    • Hargreaves DC, Crabtree GR,. ATP-dependent chromatin remodeling: Genetics, genomics and mechanisms. Cell Res 2011; 21: 396-420.
    • (2011) Cell Res , vol.21 , pp. 396-420
    • Hargreaves, D.C.1    Crabtree, G.R.2
  • 24
    • 65249180173 scopus 로고    scopus 로고
    • An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency
    • Ho L, Ronan JL, Wu J, et al., An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency. Proc Natl Acad Sci USA 2009; 106: 5181-5186.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 5181-5186
    • Ho, L.1    Ronan, J.L.2    Wu, J.3
  • 25
    • 57749105431 scopus 로고    scopus 로고
    • BRD7, a novel PBAF-specific SWI/SNF subunit, is required for target gene activation and repression in embryonic stem cells
    • Kaeser MD, Aslanian A, Dong MQ, et al., BRD7, a novel PBAF-specific SWI/SNF subunit, is required for target gene activation and repression in embryonic stem cells. J Biol Chem 2008; 283: 32254-32263.
    • (2008) J Biol Chem , vol.283 , pp. 32254-32263
    • Kaeser, M.D.1    Aslanian, A.2    Dong, M.Q.3
  • 26
    • 73349095689 scopus 로고    scopus 로고
    • Smarcc1/Baf155 couples self-renewal gene repression with changes in chromatin structure in mouse embryonic stem cells
    • Schaniel C, Ang YS, Ratnakumar K, et al., Smarcc1/Baf155 couples self-renewal gene repression with changes in chromatin structure in mouse embryonic stem cells. Stem Cells 2009; 27: 2979-2991.
    • (2009) Stem Cells , vol.27 , pp. 2979-2991
    • Schaniel, C.1    Ang, Y.S.2    Ratnakumar, K.3
  • 27
    • 62549095522 scopus 로고    scopus 로고
    • SWI/SNF-Brg1 regulates self-renewal and occupies core pluripotency-related genes in embryonic stem cells
    • Kidder BL, Palmer S, Knott JG,. SWI/SNF-Brg1 regulates self-renewal and occupies core pluripotency-related genes in embryonic stem cells. Stem Cells 2009; 27: 317-328.
    • (2009) Stem Cells , vol.27 , pp. 317-328
    • Kidder, B.L.1    Palmer, S.2    Knott, J.G.3
  • 28
    • 65249173999 scopus 로고    scopus 로고
    • An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network
    • Ho L, Jothi R, Ronan JL, et al., An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network. Proc Natl Acad Sci USA 2009; 106: 5187-5191.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 5187-5191
    • Ho, L.1    Jothi, R.2    Ronan, J.L.3
  • 29
    • 84914164187 scopus 로고    scopus 로고
    • Transcriptional repression by the BRG1-SWI/SNF complex affects the pluripotency of human embryonic stem cells
    • Zhang X, Li B, Li W, et al., Transcriptional repression by the BRG1-SWI/SNF complex affects the pluripotency of human embryonic stem cells. Stem Cell Reports 2014; 3: 460-474.
    • (2014) Stem Cell Reports , vol.3 , pp. 460-474
    • Zhang, X.1    Li, B.2    Li, W.3
  • 30
    • 78449267616 scopus 로고    scopus 로고
    • Production and titration of lentiviral vectors
    • Chapter:Unit 4 21
    • Barde I, Salmon P, Trono D,. Production and titration of lentiviral vectors. Curr Protoc Neurosci 2010;Chapter 4:Unit 4 21.
    • (2010) Curr Protoc Neurosci , vol.4
    • Barde, I.1    Salmon, P.2    Trono, D.3
  • 31
    • 66249120339 scopus 로고    scopus 로고
    • MicroRNA profiling of human-induced pluripotent stem cells
    • Wilson KD, Venkatasubrahmanyam S, Jia F, et al., MicroRNA profiling of human-induced pluripotent stem cells. Stem Cells Dev 2009; 18: 749-758.
    • (2009) Stem Cells Dev , vol.18 , pp. 749-758
    • Wilson, K.D.1    Venkatasubrahmanyam, S.2    Jia, F.3
  • 32
    • 34548201259 scopus 로고    scopus 로고
    • Neural differentiation from human embryonic stem cells in a defined adherent culture condition
    • Baharvand H, Mehrjardi N-Z, Hatami M, et al., Neural differentiation from human embryonic stem cells in a defined adherent culture condition. Int J Dev Biol 2007; 51: 371-378.
    • (2007) Int J Dev Biol , vol.51 , pp. 371-378
    • Baharvand, H.1    Mehrjardi, N.-Z.2    Hatami, M.3
  • 33
    • 67949083572 scopus 로고    scopus 로고
    • MicroRNA-mediated switching of chromatin-remodelling complexes in neural development
    • Yoo AS, Staahl BT, Chen L, et al., MicroRNA-mediated switching of chromatin-remodelling complexes in neural development. Nature 2009; 460: 642-646.
    • (2009) Nature , vol.460 , pp. 642-646
    • Yoo, A.S.1    Staahl, B.T.2    Chen, L.3
  • 34
    • 84859539293 scopus 로고    scopus 로고
    • Distinct lineage specification roles for NANOG, OCT4, and SOX2 in human embryonic stem cells
    • Wang Z, Oron E, Nelson B, et al., Distinct lineage specification roles for NANOG, OCT4, and SOX2 in human embryonic stem cells. Cell Stem Cell 2012; 10: 440-454.
    • (2012) Cell Stem Cell , vol.10 , pp. 440-454
    • Wang, Z.1    Oron, E.2    Nelson, B.3
  • 35
    • 84906260701 scopus 로고    scopus 로고
    • MyomiR-dependent switching of BAF60 variant incorporation into Brg1 chromatin remodeling complexes during embryo myogenesis
    • Goljanek-Whysall K, Mok GF, Fahad Alrefaei A, et al., myomiR-dependent switching of BAF60 variant incorporation into Brg1 chromatin remodeling complexes during embryo myogenesis. Development 2014; 141: 3378-3387.
    • (2014) Development , vol.141 , pp. 3378-3387
    • Goljanek-Whysall, K.1    Mok, G.F.2    Fahad Alrefaei, A.3
  • 36
    • 84862785757 scopus 로고    scopus 로고
    • SRG3/mBAF155 stabilizes the SWI/SNF-like BAF complex by blocking CHFR mediated ubiquitination and degradation of its major components
    • Jung I, Sohn DH, Choi J, et al., SRG3/mBAF155 stabilizes the SWI/SNF-like BAF complex by blocking CHFR mediated ubiquitination and degradation of its major components. Biochem Biophys Res Commun 2012; 418: 512-517.
    • (2012) Biochem Biophys Res Commun , vol.418 , pp. 512-517
    • Jung, I.1    Sohn, D.H.2    Choi, J.3
  • 37
    • 84877806968 scopus 로고    scopus 로고
    • Chromatin regulation by BAF170 controls cerebral cortical size and thickness
    • Tuoc TC, Boretius S, Sansom SN, et al., Chromatin regulation by BAF170 controls cerebral cortical size and thickness. Dev Cell 2013; 25: 256-269.
    • (2013) Dev Cell , vol.25 , pp. 256-269
    • Tuoc, T.C.1    Boretius, S.2    Sansom, S.N.3
  • 38
    • 84899993384 scopus 로고    scopus 로고
    • MiR-373 is regulated by TGFbeta signaling and promotes mesendoderm differentiation in human embryonic stem cells
    • Rosa A, Papaioannou MD, Krzyspiak JE, et al., miR-373 is regulated by TGFbeta signaling and promotes mesendoderm differentiation in human embryonic stem cells. Dev Biol 2014; 391: 81-88.
    • (2014) Dev Biol , vol.391 , pp. 81-88
    • Rosa, A.1    Papaioannou, M.D.2    Krzyspiak, J.E.3
  • 39
    • 64549094131 scopus 로고    scopus 로고
    • The miR-430/427/302 family controls mesendodermal fate specification via species-specific target selection
    • Rosa A, Spagnoli FM, Brivanlou AH,. The miR-430/427/302 family controls mesendodermal fate specification via species-specific target selection. Dev Cell 2009; 16: 517-527.
    • (2009) Dev Cell , vol.16 , pp. 517-527
    • Rosa, A.1    Spagnoli, F.M.2    Brivanlou, A.H.3
  • 40
    • 33745865934 scopus 로고    scopus 로고
    • Chromatin in pluripotent embryonic stem cells and differentiation
    • Meshorer E, Misteli T,. Chromatin in pluripotent embryonic stem cells and differentiation. Nat Rev Mol Cell Biol 2006; 7: 540-546.
    • (2006) Nat Rev Mol Cell Biol , vol.7 , pp. 540-546
    • Meshorer, E.1    Misteli, T.2
  • 41
    • 79952660821 scopus 로고    scopus 로고
    • Control of the embryonic stem cell state
    • Young RA,. Control of the embryonic stem cell state. Cell 2011; 144: 940-954.
    • (2011) Cell , vol.144 , pp. 940-954
    • Young, R.A.1


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