-
1
-
-
40749104852
-
An extended transcriptional network for pluripotency of embryonic stem cells
-
Kim J, Chu J, Shen X, Wang J, Orkin SH (2008) An extended transcriptional network for pluripotency of embryonic stem cells. Cell 132(6):1049-1061.
-
(2008)
Cell
, vol.132
, Issue.6
, pp. 1049-1061
-
-
Kim, J.1
Chu, J.2
Shen, X.3
Wang, J.4
Orkin, S.H.5
-
2
-
-
25144525014
-
Core transcriptional regulatory circuitry in human embryonic stem cells
-
Boyer LA, et al. (2005) Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 122(6):947-956.
-
(2005)
Cell
, vol.122
, Issue.6
, pp. 947-956
-
-
Boyer, L.A.1
-
3
-
-
40249093059
-
A core Klf circuitry regulates self-renewal of embryonic stem cells
-
Jiang J, et al. (2008) A core Klf circuitry regulates self-renewal of embryonic stem cells. Nat Cell Biol 10(3):353-360.
-
(2008)
Nat Cell Biol
, vol.10
, Issue.3
, pp. 353-360
-
-
Jiang, J.1
-
4
-
-
33646882068
-
Polycomb complexes repress developmental regulators in murine embryonic stem cells
-
Boyer L, et al. (2006) Polycomb complexes repress developmental regulators in murine embryonic stem cells. Nature 441(7091):349-353.
-
(2006)
Nature
, vol.441
, Issue.7091
, pp. 349-353
-
-
Boyer, L.1
-
5
-
-
48649091905
-
Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency
-
Chamberlain SJ, Yee D, Magnuson T (2008) Polycomb repressive complex 2 is dispensable for maintenance of embryonic stem cell pluripotency. Stem Cells 26:1496-1505.
-
(2008)
Stem Cells
, vol.26
, pp. 1496-1505
-
-
Chamberlain, S.J.1
Yee, D.2
Magnuson, T.3
-
6
-
-
48449084118
-
Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells
-
Marson A, et al. (2008) Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells. Cell 134(3):521-533.
-
(2008)
Cell
, vol.134
, Issue.3
, pp. 521-533
-
-
Marson, A.1
-
7
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein BE, et al. (2006) A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 125(2):315-326.
-
(2006)
Cell
, vol.125
, Issue.2
, pp. 315-326
-
-
Bernstein, B.E.1
-
8
-
-
33847076246
-
Genetic and epigenetic regulators of pluripotency
-
Surani M, Hayashi K, Hajkova P (2007) Genetic and epigenetic regulators of pluripotency. Cell 128(4):747-762.
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 747-762
-
-
Surani, M.1
Hayashi, K.2
Hajkova, P.3
-
9
-
-
0027493251
-
BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription
-
Khavari PA, Peterson CL, Tamkun JW, Mendel DB, Crabtree GR (1993) BRG1 contains a conserved domain of the SWI2/SNF2 family necessary for normal mitotic growth and transcription. Nature 366(6451):170-174.
-
(1993)
Nature
, vol.366
, Issue.6451
, pp. 170-174
-
-
Khavari, P.A.1
Peterson, C.L.2
Tamkun, J.W.3
Mendel, D.B.4
Crabtree, G.R.5
-
10
-
-
0029787059
-
Diversity and specialization of mammalian SWI/SNF complexes
-
Wang W, et al. (1996) Diversity and specialization of mammalian SWI/SNF complexes. Genes Dev 10(17):2117-2130.
-
(1996)
Genes Dev
, vol.10
, Issue.17
, pp. 2117-2130
-
-
Wang, W.1
-
11
-
-
34447249019
-
An essential switch in subunit composition of a chromatin remodeling complex during neural development
-
Lessard J, et al. (2007) An essential switch in subunit composition of a chromatin remodeling complex during neural development. Neuron 55(2):201-215.
-
(2007)
Neuron
, vol.55
, Issue.2
, pp. 201-215
-
-
Lessard, J.1
-
12
-
-
0041429637
-
Sequential roles of Brg, the ATPase subunit of BAF chromatin remodeling complexes, in thymocyte development
-
Chi T (2003) Sequential roles of Brg, the ATPase subunit of BAF chromatin remodeling complexes, in thymocyte development. Immunity 19(2):169-182.
-
(2003)
Immunity
, vol.19
, Issue.2
, pp. 169-182
-
-
Chi, T.1
-
13
-
-
0035134330
-
Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation
-
de la Serna IL, Carlson KA, Imbalzano AN (2001) Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation. Nat Genet 27(2):187-190.
-
(2001)
Nat Genet
, vol.27
, Issue.2
, pp. 187-190
-
-
de la Serna, I.L.1
Carlson, K.A.2
Imbalzano, A.N.3
-
14
-
-
0034502484
-
A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes
-
Bultman S, et al. (2000) A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes. Mol Cell 6(6):1287-1295.
-
(2000)
Mol Cell
, vol.6
, Issue.6
, pp. 1287-1295
-
-
Bultman, S.1
-
15
-
-
0034769937
-
Srg3, a mouse homolog of yeast SWI3, is essential for early embryogenesis and involved in brain development
-
Kim JK, et al. (2001) Srg3, a mouse homolog of yeast SWI3, is essential for early embryogenesis and involved in brain development. Mol Cell Biol 21(22):7787-7795.
-
(2001)
Mol Cell Biol
, vol.21
, Issue.22
, pp. 7787-7795
-
-
Kim, J.K.1
-
16
-
-
0034572885
-
The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression
-
1(6):500-506
-
Klochendler-Yeivin A, et al. (2000) The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression. EMBO Reports 1(6):500-506.
-
(2000)
EMBO Reports
-
-
Klochendler-Yeivin, A.1
-
17
-
-
4344624414
-
Nuclear reprogramming of human somatic cells by Xenopus egg extract requires BRG1
-
Hansis C, Barreto G, Maltry N, Niehrs C (2004) Nuclear reprogramming of human somatic cells by Xenopus egg extract requires BRG1. Curr Biol 14(16):1475-1480.
-
(2004)
Curr Biol
, vol.14
, Issue.16
, pp. 1475-1480
-
-
Hansis, C.1
Barreto, G.2
Maltry, N.3
Niehrs, C.4
-
18
-
-
46149110511
-
An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity
-
Fazzio TG, Huff JT, Panning B (2008) An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity. Cell 134(1):162-174.
-
(2008)
Cell
, vol.134
, Issue.1
, pp. 162-174
-
-
Fazzio, T.G.1
Huff, J.T.2
Panning, B.3
-
19
-
-
44349105786
-
ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a
-
Gao X, et al. (2008) ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a. Proc Natl Acad Sci USA 105(18):6656-6661.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.18
, pp. 6656-6661
-
-
Gao, X.1
-
20
-
-
47949107720
-
BAF250B-associated SWI/SNF chromatin-remodeling complex is required to maintain undifferentiated mouse embryonic stem cells
-
Yan Z, et al. (2008) BAF250B-associated SWI/SNF chromatin-remodeling complex is required to maintain undifferentiated mouse embryonic stem cells. Stem Cells 26(5):1155-1165.
-
(2008)
Stem Cells
, vol.26
, Issue.5
, pp. 1155-1165
-
-
Yan, Z.1
-
21
-
-
34250168295
-
Rules and regulationinthe primary structure of chromatin
-
Rando OJ, Ahmad K(2007) Rules and regulationinthe primary structure of chromatin. Curr Opin Cell Biol 19(3):250-256.
-
(2007)
Curr Opin Cell Biol
, vol.19
, Issue.3
, pp. 250-256
-
-
Rando, O.J.1
Ahmad, K.2
-
22
-
-
0023652328
-
Cell cycle control of the yeast HO gene: Cis- and trans acting regulators
-
Breeden L, Nasmyth K (1987) Cell cycle control of the yeast HO gene: cis- and trans acting regulators. Cell 48(3):389-397.
-
(1987)
Cell
, vol.48
, Issue.3
, pp. 389-397
-
-
Breeden, L.1
Nasmyth, K.2
-
23
-
-
27744533201
-
Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae
-
Martens JA, Wu PY, Winston F (2005) Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae. Genes Dev 19(22):2695-2704.
-
(2005)
Genes Dev
, vol.19
, Issue.22
, pp. 2695-2704
-
-
Martens, J.A.1
Wu, P.Y.2
Winston, F.3
-
24
-
-
0037062922
-
Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes
-
Chi TH, et al. (2002) Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes. Nature 418(6894):195-199.
-
(2002)
Nature
, vol.418
, Issue.6894
, pp. 195-199
-
-
Chi, T.H.1
-
25
-
-
0037175017
-
REST repression of neuronal genes requires components of the hSWI.SNF complex
-
Battaglioli E, et al. (2002) REST repression of neuronal genes requires components of the hSWI.SNF complex. J Biol Chem 277(43):41038-41045.
-
(2002)
J Biol Chem
, vol.277
, Issue.43
, pp. 41038-41045
-
-
Battaglioli, E.1
-
26
-
-
0034737290
-
Exit from G1 and S phase of the cell cycle is regulated by repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF
-
Zhang HS, et al. (2000) Exit from G1 and S phase of the cell cycle is regulated by repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF. Cell 101(1):79-89.
-
(2000)
Cell
, vol.101
, Issue.1
, pp. 79-89
-
-
Zhang, H.S.1
-
27
-
-
0036791792
-
Identification of a polymorphic, neuron-specific chromatin remodeling complex
-
Olave I (2002) Identification of a polymorphic, neuron-specific chromatin remodeling complex. Genes Dev 16(19):2509-2517.
-
(2002)
Genes Dev
, vol.16
, Issue.19
, pp. 2509-2517
-
-
Olave, I.1
-
28
-
-
34748887795
-
Regulation of dendritic development by neuron-specific chromatin remodeling complexes
-
Wu J, et al. (2007) Regulation of dendritic development by neuron-specific chromatin remodeling complexes. Neuron 56(1):94-108.
-
(2007)
Neuron
, vol.56
, Issue.1
, pp. 94-108
-
-
Wu, J.1
-
29
-
-
8544270889
-
Baf60c is essential for function of BAF chromatin remodelling complexes in heart development
-
Lickert H, et al. (2004) Baf60c is essential for function of BAF chromatin remodelling complexes in heart development. Nature 432(7013):107-112.
-
(2004)
Nature
, vol.432
, Issue.7013
, pp. 107-112
-
-
Lickert, H.1
-
30
-
-
23044461703
-
PBAF chromatin-remodeling complex requires a novel specificity subunit, BAF200, to regulate expression of selective interferon-responsive genes
-
Yan Z, et al. (2005) PBAF chromatin-remodeling complex requires a novel specificity subunit, BAF200, to regulate expression of selective interferon-responsive genes. Genes Dev 19(14):1662-1667.
-
(2005)
Genes Dev
, vol.19
, Issue.14
, pp. 1662-1667
-
-
Yan, Z.1
-
31
-
-
10644277238
-
Polybromo protein BAF180 functions in mammalian cardiac chamber maturation
-
Wang Z, et al. (2004) Polybromo protein BAF180 functions in mammalian cardiac chamber maturation. Genes Dev 18(24):3106-3116.
-
(2004)
Genes Dev
, vol.18
, Issue.24
, pp. 3106-3116
-
-
Wang, Z.1
-
32
-
-
35848929694
-
Analysis and validation of proteomic data generated by tandem mass spectrometry
-
Nesvizhskii A, Vitek O, Aebersold R (2007) Analysis and validation of proteomic data generated by tandem mass spectrometry. Nature Methods 4(10):787-797.
-
(2007)
Nature Methods
, vol.4
, Issue.10
, pp. 787-797
-
-
Nesvizhskii, A.1
Vitek, O.2
Aebersold, R.3
-
33
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
Nesvizhskii AI, Keller A, Kolker E, Aebersold R (2003) A statistical model for identifying proteins by tandem mass spectrometry. Analytical Chemistry 75(17):4646-4658.
-
(2003)
Analytical Chemistry
, vol.75
, Issue.17
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
34
-
-
0032403109
-
Altered control of cellular proliferation in the absence of mammalian Brahma (SNF2alpha)
-
Reyes JC, et al. (1998) Altered control of cellular proliferation in the absence of mammalian Brahma (SNF2alpha). EMBO J 17(23):6979-6991.
-
(1998)
EMBO J
, vol.17
, Issue.23
, pp. 6979-6991
-
-
Reyes, J.C.1
-
35
-
-
10144228410
-
Purification and biochemical heterogeneity of the mammalian SWI-SNF complex
-
Wang W, et al. (1996) Purification and biochemical heterogeneity of the mammalian SWI-SNF complex. EMBO J 15(19):5370-5382.
-
(1996)
EMBO J
, vol.15
, Issue.19
, pp. 5370-5382
-
-
Wang, W.1
-
36
-
-
0035924326
-
Selectivity of chromatin-remodelling cofactors for ligand-activated transcription
-
Lemon B, Inouye C, King DS, Tjian R (2001) Selectivity of chromatin-remodelling cofactors for ligand-activated transcription. Nature 414(6866):924-928.
-
(2001)
Nature
, vol.414
, Issue.6866
, pp. 924-928
-
-
Lemon, B.1
Inouye, C.2
King, D.S.3
Tjian, R.4
-
37
-
-
39249083223
-
SRG3, a core componentof mouse SWI/SNF complex, is essential for extra-embryonic vascular development
-
Han D, et al. (2008) SRG3, a core componentof mouse SWI/SNF complex, is essential for extra-embryonic vascular development. Dev Biol 315(1):136-146.
-
(2008)
Dev Biol
, vol.315
, Issue.1
, pp. 136-146
-
-
Han, D.1
-
38
-
-
33747195353
-
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
-
Takahashi K, Yamanaka S (2006) Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126(4):663-676.
-
(2006)
Cell
, vol.126
, Issue.4
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
39
-
-
62549095522
-
-
Kidder BL, Palmer S, Knott JG(December 4, 2008) SWI/SNF-Brg1 regulates self-renewal and occupies core pluripotency-related genes in embryonic stem cells. Stem Cells, 10.1634/stemcells.2008-0710.
-
Kidder BL, Palmer S, Knott JG(December 4, 2008) SWI/SNF-Brg1 regulates self-renewal and occupies core pluripotency-related genes in embryonic stem cells. Stem Cells, 10.1634/stemcells.2008-0710.
-
-
-
-
40
-
-
65249173999
-
An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network
-
10.1073/PNAS.0812888106
-
Ho L, et al. (2009) An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network. Proc Natl Acad Sci USA, 10.1073/PNAS.0812888106.
-
(2009)
Proc Natl Acad Sci USA
-
-
Ho, L.1
-
41
-
-
0033561043
-
Continuous and widespread roles for the Swi-Snf complex in transcription
-
Biggar SR, Crabtree GR (1999) Continuous and widespread roles for the Swi-Snf complex in transcription. EMBO J 18(8):2254-2264.
-
(1999)
EMBO J
, vol.18
, Issue.8
, pp. 2254-2264
-
-
Biggar, S.R.1
Crabtree, G.R.2
-
42
-
-
33645381936
-
The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells
-
Loh Y, et al. (2006) The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells. Nat Genet 38(4):431-440.
-
(2006)
Nat Genet
, vol.38
, Issue.4
, pp. 431-440
-
-
Loh, Y.1
-
43
-
-
36349037021
-
Developmental pluripotency-associated 4 (DPPA4) localized in active chromatin inhibits mouse embryonic stem cell differentiation intoaprimitive ectoderm lineage
-
Masaki H, Nishida T, Kitajima S, Asahina K, Teraoka H (2007) Developmental pluripotency-associated 4 (DPPA4) localized in active chromatin inhibits mouse embryonic stem cell differentiation intoaprimitive ectoderm lineage. J Biol Chem 282(45):33034-33042.
-
(2007)
J Biol Chem
, vol.282
, Issue.45
, pp. 33034-33042
-
-
Masaki, H.1
Nishida, T.2
Kitajima, S.3
Asahina, K.4
Teraoka, H.5
-
44
-
-
58149299336
-
Significance analysis of spectral count data in label-free shotgun proteomics
-
Choi H, Fermin D, Nesvizhskii AI (2008) Significance analysis of spectral count data in label-free shotgun proteomics. Molecular & Cellular Proteomics 7:2373-2385.
-
(2008)
Molecular & Cellular Proteomics
, vol.7
, pp. 2373-2385
-
-
Choi, H.1
Fermin, D.2
Nesvizhskii, A.I.3
-
45
-
-
33748319353
-
Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae
-
Zybailov B, et al. (2006) Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae. Journal of Proteome Research 5(9):2339-2347.
-
(2006)
Journal of Proteome Research
, vol.5
, Issue.9
, pp. 2339-2347
-
-
Zybailov, B.1
|