-
1
-
-
84875196326
-
Determinants of nucleosome positioning
-
Struhl,K. and Segal,E. (2013) Determinants of nucleosome positioning. Nat. Struct. Mol. Biol., 20, 267-273.
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 267-273
-
-
Struhl, K.1
Segal, E.2
-
2
-
-
84867371116
-
A functional evolutionary approach to identify determinants of nucleosome positioning: A unifying model for establishing the genome-wide pattern
-
Hughes,A.L., Jin,Y., Rando,O.J. and Struhl,K. (2012) A functional evolutionary approach to identify determinants of nucleosome positioning: a unifying model for establishing the genome-wide pattern. Mol. Cell, 48, 5-15.
-
(2012)
Mol. Cell
, vol.48
, pp. 5-15
-
-
Hughes, A.L.1
Jin, Y.2
Rando, O.J.3
Struhl, K.4
-
3
-
-
0022817308
-
RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells
-
Gilmour,D.S. and Lis,J.T. (1986) RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells. Mol. Cell. Biol., 6, 3984-3989.
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 3984-3989
-
-
Gilmour, D.S.1
Lis, J.T.2
-
4
-
-
0026440185
-
The block to transcriptional elongation within the human c-myc gene is determined in the promoter-proximal region
-
Krumm,A., Meulia,T., Brunvand,M. and Groudine,M. (1992) The block to transcriptional elongation within the human c-myc gene is determined in the promoter-proximal region. Genes Dev., 6, 2201-2213.
-
(1992)
Genes Dev.
, vol.6
, pp. 2201-2213
-
-
Krumm, A.1
Meulia, T.2
Brunvand, M.3
Groudine, M.4
-
5
-
-
0028893897
-
Elongation and premature termination of transcripts initiated from c-fos and c-myc promoters show dissimilar patterns
-
Plet,A., Eick,D. and Blanchard,J.M. (1995) Elongation and premature termination of transcripts initiated from c-fos and c-myc promoters show dissimilar patterns. Oncogene, 10, 319-328.
-
(1995)
Oncogene
, vol.10
, pp. 319-328
-
-
Plet, A.1
Eick, D.2
Blanchard, J.M.3
-
6
-
-
84871699564
-
Promoter-proximal pausing of RNA polymerase II: Emerging roles in metazoans
-
Adelman,K. and Lis,J.T. (2012) Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans. Nat. Rev. Genet., 13, 720-731.
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 720-731
-
-
Adelman, K.1
Lis, J.T.2
-
7
-
-
84874175008
-
Precise maps of RNA polymerase reveal how promoters direct initiation and pausing
-
Kwak,H., Fuda,N.J., Core,L.J. and Lis,J.T. (2013) Precise maps of RNA polymerase reveal how promoters direct initiation and pausing. Science, 339, 950-953.
-
(2013)
Science
, vol.339
, pp. 950-953
-
-
Kwak, H.1
Fuda, N.J.2
Core, L.J.3
Lis, J.T.4
-
8
-
-
84887161037
-
Control of transcriptional elongation
-
Kwak,H. and Lis,J.T. (2013) Control of transcriptional elongation. Annu. Rev. Genet., 47, 483-508.
-
(2013)
Annu. Rev. Genet.
, vol.47
, pp. 483-508
-
-
Kwak, H.1
Lis, J.T.2
-
9
-
-
84872393129
-
Transcription elongation factors DSIF and NELF: Promoter-proximal pausing and beyond
-
Yamaguchi,Y., Shibata,H. and Handa,H. (2013) Transcription elongation factors DSIF and NELF: promoter-proximal pausing and beyond. Biochim. Biophys. Acta, 1829, 98-104.
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 98-104
-
-
Yamaguchi, Y.1
Shibata, H.2
Handa, H.3
-
10
-
-
0346095303
-
Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element
-
Fujinaga,K., Irwin,D., Huang,Y., Taube,R., Kurosu,T. and Peterlin,B.M. (2004) Dynamics of human immunodeficiency virus transcription: P-TEFb phosphorylates RD and dissociates negative effectors from the transactivation response element. Mol. Cell. Biol., 24, 787-795.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 787-795
-
-
Fujinaga, K.1
Irwin, D.2
Huang, Y.3
Taube, R.4
Kurosu, T.5
Peterlin, B.M.6
-
11
-
-
0037609009
-
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila
-
Wu,C.H., Yamaguchi,Y., Benjamin,L.R., Horvat-Gordon,M., Washinsky,J., Enerly,E., Larsson,J., Lambertsson,A., Handa,H. and Gilmour,D. (2003) NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila. Genes Dev., 17, 1402-1414.
-
(2003)
Genes Dev.
, vol.17
, pp. 1402-1414
-
-
Wu, C.H.1
Yamaguchi, Y.2
Benjamin, L.R.3
Horvat-Gordon, M.4
Washinsky, J.5
Enerly, E.6
Larsson, J.7
Lambertsson, A.8
Handa, H.9
Gilmour, D.10
-
12
-
-
30744449491
-
P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation
-
Yamada,T., Yamaguchi,Y., Inukai,N., Okamoto,S., Mura,T. and Handa,H. (2006) P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation. Mol. Cell, 21, 227-237.
-
(2006)
Mol. Cell
, vol.21
, pp. 227-237
-
-
Yamada, T.1
Yamaguchi, Y.2
Inukai, N.3
Okamoto, S.4
Mura, T.5
Handa, H.6
-
13
-
-
84878860082
-
Kinetic competition between elongation rate and binding of NELF controls promoter-proximal pausing
-
Li,J., Liu,Y., Rhee,H.S., Ghosh,S.K., Bai,L., Pugh,B.F. and Gilmour,D.S. (2013) Kinetic competition between elongation rate and binding of NELF controls promoter-proximal pausing. Mol. Cell, 50, 711-722.
-
(2013)
Mol. Cell
, vol.50
, pp. 711-722
-
-
Li, J.1
Liu, Y.2
Rhee, H.S.3
Ghosh, S.K.4
Bai, L.5
Pugh, B.F.6
Gilmour, D.S.7
-
14
-
-
84880212130
-
Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor
-
Li,J. and Gilmour,D.S. (2013) Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor. EMBO J., 32, 1829-1841.
-
(2013)
EMBO J.
, vol.32
, pp. 1829-1841
-
-
Li, J.1
Gilmour, D.S.2
-
15
-
-
33750442129
-
Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II
-
Bondarenko,V.A., Steele,L.M., Ujvari,A., Gaykalova,D.A., Kulaeva,O.I., Polikanov,Y.S., Luse,D.S. and Studitsky,V.M. (2006) Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II. Mol. Cell, 24, 469-479.
-
(2006)
Mol. Cell
, vol.24
, pp. 469-479
-
-
Bondarenko, V.A.1
Steele, L.M.2
Ujvari, A.3
Gaykalova, D.A.4
Kulaeva, O.I.5
Polikanov, Y.S.6
Luse, D.S.7
Studitsky, V.M.8
-
16
-
-
77957243147
-
BRG1 helps RNA polymerase II to overcome a nucleosomal barrier during elongation, in vivo
-
Subtil-Rodriguez,A. and Reyes,J.C. (2010) BRG1 helps RNA polymerase II to overcome a nucleosomal barrier during elongation, in vivo. EMBO Rep., 11, 751-757.
-
(2010)
EMBO Rep.
, vol.11
, pp. 751-757
-
-
Subtil-Rodriguez, A.1
Reyes, J.C.2
-
17
-
-
0025877255
-
Transcription on nucleosomal templates by RNA polymerase II in vitro: Inhibition of elongation with enhancement of sequence-specific pausing
-
Izban,M.G. and Luse,D.S. (1991) Transcription on nucleosomal templates by RNA polymerase II in vitro: inhibition of elongation with enhancement of sequence-specific pausing. Genes Dev., 5, 683-696.
-
(1991)
Genes Dev.
, vol.5
, pp. 683-696
-
-
Izban, M.G.1
Luse, D.S.2
-
18
-
-
0033746028
-
Nuclear run-on assay using biotin labeling, magnetic bead capture and analysis by fluorescence-based RT-PCR
-
Patrone,G., Puppo,F., Cusano,R., Scaranari,M., Ceccherini,I., Puliti,A. and Ravazzolo,R. (2000) Nuclear run-on assay using biotin labeling, magnetic bead capture and analysis by fluorescence-based RT-PCR. Biotechniques, 29, 1012-1017.
-
(2000)
Biotechniques
, vol.29
, pp. 1012-1017
-
-
Patrone, G.1
Puppo, F.2
Cusano, R.3
Scaranari, M.4
Ceccherini, I.5
Puliti, A.6
Ravazzolo, R.7
-
19
-
-
76849114364
-
The yeast 5′-3′ exonuclease Rat1p functions during transcription elongation by RNA polymerase II
-
Jimeno-Gonzalez,S., Haaning,L.L., Malagon,F. and Jensen,T.H. (2010) The yeast 5′-3′ exonuclease Rat1p functions during transcription elongation by RNA polymerase II. Mol. Cell, 37, 580-587.
-
(2010)
Mol. Cell
, vol.37
, pp. 580-587
-
-
Jimeno-Gonzalez, S.1
Haaning, L.L.2
Malagon, F.3
Jensen, T.H.4
-
20
-
-
0032512794
-
New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning
-
Lowary,P.T. and Widom,J. (1998) New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning. J. Mol. Biol., 276, 19-42.
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 19-42
-
-
Lowary, P.T.1
Widom, J.2
-
21
-
-
0039837085
-
Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences
-
Thastrom,A., Lowary,P.T., Widlund,H.R., Cao,H., Kubista,M. and Widom,J. (1999) Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences. J. Mol. Biol., 288, 213-229.
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 213-229
-
-
Thastrom, A.1
Lowary, P.T.2
Widlund, H.R.3
Cao, H.4
Kubista, M.5
Widom, J.6
-
22
-
-
0022398241
-
Effects of sequence alterations in a DNA segment containing the 5 S RNA gene from Lytechinus variegatus on positioning of a nucleosome core particle in vitro
-
FitzGerald,P.C. and Simpson,R.T. (1985) Effects of sequence alterations in a DNA segment containing the 5 S RNA gene from Lytechinus variegatus on positioning of a nucleosome core particle in vitro. J. Biol. Chem., 260, 15318-15324.
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 15318-15324
-
-
Fitzgerald, P.C.1
Simpson, R.T.2
-
23
-
-
33747500567
-
A genomic code for nucleosome positioning
-
Segal,E., Fondufe-Mittendorf,Y., Chen,L., Thastrom,A., Field,Y., Moore,I.K., Wang,J.P. and Widom,J. (2006) A genomic code for nucleosome positioning. Nature, 442, 772-778.
-
(2006)
Nature
, vol.442
, pp. 772-778
-
-
Segal, E.1
Fondufe-Mittendorf, Y.2
Chen, L.3
Thastrom, A.4
Field, Y.5
Moore, I.K.6
Wang, J.P.7
Widom, J.8
-
24
-
-
0142123203
-
Transcription factor and polymerase recruitment, modification, and movement on dhsp70 in vivo in the minutes following heat shock
-
Boehm,A.K., Saunders,A., Werner,J. and Lis,J.T. (2003) Transcription factor and polymerase recruitment, modification, and movement on dhsp70 in vivo in the minutes following heat shock. Mol. Cell. Biol., 23, 7628-7637.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 7628-7637
-
-
Boehm, A.K.1
Saunders, A.2
Werner, J.3
Lis, J.T.4
-
25
-
-
37249015899
-
Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7
-
Chapman,R.D., Heidemann,M., Albert,T.K., Mailhammer,R., Flatley,A., Meisterernst,M., Kremmer,E. and Eick,D. (2007) Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7. Science, 318, 1780-1782.
-
(2007)
Science
, vol.318
, pp. 1780-1782
-
-
Chapman, R.D.1
Heidemann, M.2
Albert, T.K.3
Mailhammer, R.4
Flatley, A.5
Meisterernst, M.6
Kremmer, E.7
Eick, D.8
-
26
-
-
0026660649
-
Hold back of RNA polymerase II at the transcription start site mediates down-regulation of c-myc in vivo
-
Strobl,L.J. and Eick,D. (1992) Hold back of RNA polymerase II at the transcription start site mediates down-regulation of c-myc in vivo. EMBO J., 11, 3307-3314.
-
(1992)
EMBO J.
, vol.11
, pp. 3307-3314
-
-
Strobl, L.J.1
Eick, D.2
-
27
-
-
84888203152
-
Stable Pausing by RNA Polymerase II Provides an Opportunity to Target and Integrate Regulatory Signals
-
Henriques,T., Gilchrist,D.A., Nechaev,S., Bern,M., Muse,G.W., Burkholder,A., Fargo,D.C. and Adelman,K. (2013) Stable Pausing by RNA Polymerase II Provides an Opportunity to Target and Integrate Regulatory Signals. Mol. Cell, 52, 517-528.
-
(2013)
Mol. Cell
, vol.52
, pp. 517-528
-
-
Henriques, T.1
Gilchrist, D.A.2
Nechaev, S.3
Bern, M.4
Muse, G.W.5
Burkholder, A.6
Fargo, D.C.7
Adelman, K.8
-
28
-
-
2442681755
-
Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II
-
Mandal,S.S., Chu,C., Wada,T., Handa,H., Shatkin,A.J. and Reinberg,D. (2004) Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II. Proc. Natl. Acad. Sci. U.S.A., 101, 7572-7577.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 7572-7577
-
-
Mandal, S.S.1
Chu, C.2
Wada, T.3
Handa, H.4
Shatkin, A.J.5
Reinberg, D.6
-
29
-
-
0037313160
-
Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins
-
Lindstrom,D.L., Squazzo,S.L., Muster,N., Burckin,T.A., Wachter,K.C., Emigh,C.A., McCleery,J.A., Yates,J.R. 3rd and Hartzog,G.A. (2003) Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins. Mol. Cell. Biol., 23, 1368-1378.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 1368-1378
-
-
Lindstrom, D.L.1
Squazzo, S.L.2
Muster, N.3
Burckin, T.A.4
Wachter, K.C.5
Emigh, C.A.6
McCleery, J.A.7
Yates, J.R.8
Hartzog, G.A.9
-
30
-
-
0033566042
-
Transcription elongation factor hSPT5 stimulates mRNA capping
-
Wen,Y. and Shatkin,A.J. (1999) Transcription elongation factor hSPT5 stimulates mRNA capping. Genes Dev., 13, 1774-1779.
-
(1999)
Genes Dev.
, vol.13
, pp. 1774-1779
-
-
Wen, Y.1
Shatkin, A.J.2
-
31
-
-
84868152650
-
DSIF restricts NF-kappaB signaling by coordinating elongation with mRNA processing of negative feedback genes
-
Diamant,G., Amir-Zilberstein,L., Yamaguchi,Y., Handa,H. and Dikstein,R. (2012) DSIF restricts NF-kappaB signaling by coordinating elongation with mRNA processing of negative feedback genes. Cell. Rep., 2, 722-731.
-
(2012)
Cell. Rep.
, vol.2
, pp. 722-731
-
-
Diamant, G.1
Amir-Zilberstein, L.2
Yamaguchi, Y.3
Handa, H.4
Dikstein, R.5
-
32
-
-
0023806396
-
Pre-mRNA splicing by complementation with purified human U1, U2, U4/U6 and U5 snRNPs
-
Krainer,A.R. (1988) Pre-mRNA splicing by complementation with purified human U1, U2, U4/U6 and U5 snRNPs. Nucleic Acids Res., 16, 9415-9429.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 9415-9429
-
-
Krainer, A.R.1
-
33
-
-
0142147328
-
The roles of endonucleolytic cleavage and exonucleolytic digestion in the 5′-end processing of S. Cerevisiae box C/D snoRNAs
-
Lee,C.Y., Lee,A. and Chanfreau,G. (2003) The roles of endonucleolytic cleavage and exonucleolytic digestion in the 5′-end processing of S. cerevisiae box C/D snoRNAs. RNA, 9, 1362-1370.
-
(2003)
RNA
, vol.9
, pp. 1362-1370
-
-
Lee, C.Y.1
Lee, A.2
Chanfreau, G.3
-
34
-
-
84860706859
-
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription
-
Brannan,K., Kim,H., Erickson,B., Glover-Cutter,K., Kim,S., Fong,N., Kiemele,L., Hansen,K., Davis,R., Lykke-Andersen,J. et al. (2012) mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription. Mol. Cell, 46, 311-324.
-
(2012)
Mol. Cell
, vol.46
, pp. 311-324
-
-
Brannan, K.1
Kim, H.2
Erickson, B.3
Glover-Cutter, K.4
Kim, S.5
Fong, N.6
Kiemele, L.7
Hansen, K.8
Davis, R.9
Lykke-Andersen, J.10
-
35
-
-
84866366785
-
Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII
-
Wagschal,A., Rousset,E., Basavarajaiah,P., Contreras,X., Harwig,A., Laurent-Chabalier,S., Nakamura,M., Chen,X., Zhang,K., Meziane,O. et al. (2012) Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII. Cell, 150, 1147-1157.
-
(2012)
Cell
, vol.150
, pp. 1147-1157
-
-
Wagschal, A.1
Rousset, E.2
Basavarajaiah, P.3
Contreras, X.4
Harwig, A.5
Laurent-Chabalier, S.6
Nakamura, M.7
Chen, X.8
Zhang, K.9
Meziane, O.10
-
36
-
-
84881166117
-
Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes
-
Narlikar,G.J., Sundaramoorthy,R. and Owen-Hughes,T. (2013) Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes. Cell, 154, 490-503.
-
(2013)
Cell
, vol.154
, pp. 490-503
-
-
Narlikar, G.J.1
Sundaramoorthy, R.2
Owen-Hughes, T.3
-
37
-
-
67650725820
-
The biology of chromatin remodeling complexes
-
Clapier,C.R. and Cairns,B.R. (2009) The biology of chromatin remodeling complexes. Annu. Rev. Biochem., 78, 273-304.
-
(2009)
Annu. Rev. Biochem.
, vol.78
, pp. 273-304
-
-
Clapier, C.R.1
Cairns, B.R.2
-
38
-
-
80052651122
-
Diversity of operation in ATP-dependent chromatin remodelers
-
Hota,S.K. and Bartholomew,B. (2011) Diversity of operation in ATP-dependent chromatin remodelers. Biochim. Biophys. Acta, 1809, 476-487.
-
(2011)
Biochim. Biophys. Acta
, vol.1809
, pp. 476-487
-
-
Hota, S.K.1
Bartholomew, B.2
-
39
-
-
84872022465
-
The ATPase domain of ISWI is an autonomous nucleosome remodeling machine
-
Mueller-Planitz,F., Klinker,H., Ludwigsen,J. and Becker,P.B. (2013) The ATPase domain of ISWI is an autonomous nucleosome remodeling machine. Nat. Struct. Mol. Biol., 20, 82-89.
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 82-89
-
-
Mueller-Planitz, F.1
Klinker, H.2
Ludwigsen, J.3
Becker, P.B.4
-
40
-
-
79956316470
-
A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome
-
Zhang,Z., Wippo,C.J., Wal,M., Ward,E., Korber,P. and Pugh,B.F. (2011) A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome. Science, 332, 977-980.
-
(2011)
Science
, vol.332
, pp. 977-980
-
-
Zhang, Z.1
Wippo, C.J.2
Wal, M.3
Ward, E.4
Korber, P.5
Pugh, B.F.6
-
41
-
-
0033558873
-
Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae
-
Tsukiyama,T., Palmer,J., Landel,C.C., Shiloach,J. and Wu,C. (1999) Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae. Genes Dev., 13, 686-697.
-
(1999)
Genes Dev.
, vol.13
, pp. 686-697
-
-
Tsukiyama, T.1
Palmer, J.2
Landel, C.C.3
Shiloach, J.4
Wu, C.5
-
42
-
-
33745221438
-
Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes
-
Stockdale,C., Flaus,A., Ferreira,H. and Owen-Hughes,T. (2006) Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes. J. Biol. Chem., 281, 16279-16288.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 16279-16288
-
-
Stockdale, C.1
Flaus, A.2
Ferreira, H.3
Owen-Hughes, T.4
-
43
-
-
33744916194
-
Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome
-
Zofall,M., Persinger,J., Kassabov,S.R. and Bartholomew,B. (2006) Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome. Nat. Struct. Mol. Biol., 13, 339-346.
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 339-346
-
-
Zofall, M.1
Persinger, J.2
Kassabov, S.R.3
Bartholomew, B.4
-
44
-
-
79251545788
-
The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor
-
Udugama,M., Sabri,A. and Bartholomew,B. (2011) The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor. Mol. Cell. Biol., 31, 662-673.
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 662-673
-
-
Udugama, M.1
Sabri, A.2
Bartholomew, B.3
-
45
-
-
0030839857
-
Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II
-
Varga-Weisz,P.D., Wilm,M., Bonte,E., Dumas,K., Mann,M. and Becker,P.B. (1997) Chromatin-remodelling factor CHRAC contains the ATPases ISWI and topoisomerase II. Nature, 388, 598-602.
-
(1997)
Nature
, vol.388
, pp. 598-602
-
-
Varga-Weisz, P.D.1
Wilm, M.2
Bonte, E.3
Dumas, K.4
Mann, M.5
Becker, P.B.6
-
46
-
-
0032519352
-
Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter
-
Benjamin,L.R. and Gilmour,D.S. (1998) Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter. Nucleic Acids Res., 26, 1051-1055.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1051-1055
-
-
Benjamin, L.R.1
Gilmour, D.S.2
-
47
-
-
78149477660
-
Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation
-
Gilchrist,D.A., Dos Santos,G., Fargo,D.C., Xie,B., Gao,Y., Li,L. and Adelman,K. (2010) Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation. Cell, 143, 540-551.
-
(2010)
Cell
, vol.143
, pp. 540-551
-
-
Gilchrist, D.A.1
Dos Santos, G.2
Fargo, D.C.3
Xie, B.4
Gao, Y.5
Li, L.6
Adelman, K.7
-
48
-
-
0029759928
-
Activator-dependent regulation of transcriptional pausing on nucleosomal templates
-
Brown,S.A., Imbalzano,A.N. and Kingston,R.E. (1996) Activator-dependent regulation of transcriptional pausing on nucleosomal templates. Genes Dev., 10, 1479-1490.
-
(1996)
Genes Dev.
, vol.10
, pp. 1479-1490
-
-
Brown, S.A.1
Imbalzano, A.N.2
Kingston, R.E.3
-
49
-
-
43749099875
-
Nucleosome organization in the Drosophila genome
-
Mavrich,T.N., Jiang,C., Ioshikhes,I.P., Li,X., Venters,B.J., Zanton,S.J., Tomsho,L.P., Qi,J., Glaser,R.L., Schuster,S.C. et al. (2008) Nucleosome organization in the Drosophila genome. Nature, 453, 358-362.
-
(2008)
Nature
, vol.453
, pp. 358-362
-
-
Mavrich, T.N.1
Jiang, C.2
Ioshikhes, I.P.3
Li, X.4
Venters, B.J.5
Zanton, S.J.6
Tomsho, L.P.7
Qi, J.8
Glaser, R.L.9
Schuster, S.C.10
-
50
-
-
84896786505
-
Nucleosomes Are Context-Specific, H2A.Z-Modulated Barriers to RNA Polymerase
-
Weber,C.M., Ramachandran,S. and Henikoff,S. (2014) Nucleosomes Are Context-Specific, H2A.Z-Modulated Barriers to RNA Polymerase. Mol. Cell, 53, 819-830.
-
(2014)
Mol. Cell
, vol.53
, pp. 819-830
-
-
Weber, C.M.1
Ramachandran, S.2
Henikoff, S.3
-
51
-
-
0033082269
-
ISWI is an ATP-dependent nucleosome remodeling factor
-
Corona,D.F., Langst,G., Clapier,C.R., Bonte,E.J., Ferrari,S., Tamkun,J.W. and Becker,P.B. (1999) ISWI is an ATP-dependent nucleosome remodeling factor. Mol. Cell, 3, 239-245.
-
(1999)
Mol. Cell
, vol.3
, pp. 239-245
-
-
Corona, D.F.1
Langst, G.2
Clapier, C.R.3
Bonte, E.J.4
Ferrari, S.5
Tamkun, J.W.6
Becker, P.B.7
-
52
-
-
84862643713
-
Genome-wide nucleosome specificity and directionality of chromatin remodelers
-
Yen,K., Vinayachandran,V., Batta,K., Koerber,R.T. and Pugh,B.F. (2012) Genome-wide nucleosome specificity and directionality of chromatin remodelers. Cell, 149, 1461-1473.
-
(2012)
Cell
, vol.149
, pp. 1461-1473
-
-
Yen, K.1
Vinayachandran, V.2
Batta, K.3
Koerber, R.T.4
Pugh, B.F.5
-
53
-
-
37249077649
-
Chromatin remodelling at promoters suppresses antisense transcription
-
Whitehouse,I., Rando,O.J., Delrow,J. and Tsukiyama,T. (2007) Chromatin remodelling at promoters suppresses antisense transcription. Nature, 450, 1031-1035.
-
(2007)
Nature
, vol.450
, pp. 1031-1035
-
-
Whitehouse, I.1
Rando, O.J.2
Delrow, J.3
Tsukiyama, T.4
-
54
-
-
79955598852
-
Genome-wide characterization of chromatin binding and nucleosome spacing activity of the nucleosome remodelling ATPase ISWI
-
Sala,A., Toto,M., Pinello,L., Gabriele,A., Di Benedetto,V., Ingrassia,A.M., Lo Bosco,G., Di Gesu,V., Giancarlo,R. and Corona,D.F. (2011) Genome-wide characterization of chromatin binding and nucleosome spacing activity of the nucleosome remodelling ATPase ISWI. EMBO J., 30, 1766-1777.
-
(2011)
EMBO J.
, vol.30
, pp. 1766-1777
-
-
Sala, A.1
Toto, M.2
Pinello, L.3
Gabriele, A.4
Di Benedetto, V.5
Ingrassia, A.M.6
Lo Bosco, G.7
Di Gesu, V.8
Giancarlo, R.9
Corona, D.F.10
-
55
-
-
80053140931
-
A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization
-
Gkikopoulos,T., Schofield,P., Singh,V., Pinskaya,M., Mellor,J., Smolle,M., Workman,J.L., Barton,G.J. and Owen-Hughes,T. (2011) A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization. Science, 333, 1758-1760.
-
(2011)
Science
, vol.333
, pp. 1758-1760
-
-
Gkikopoulos, T.1
Schofield, P.2
Singh, V.3
Pinskaya, M.4
Mellor, J.5
Smolle, M.6
Workman, J.L.7
Barton, G.J.8
Owen-Hughes, T.9
-
56
-
-
33748363908
-
The N-CoR complex enables chromatin remodeler SNF2H to enhance repression by thyroid hormone receptor
-
Alenghat,T., Yu,J. and Lazar,M.A. (2006) The N-CoR complex enables chromatin remodeler SNF2H to enhance repression by thyroid hormone receptor. EMBO J., 25, 3966-3974.
-
(2006)
EMBO J.
, vol.25
, pp. 3966-3974
-
-
Alenghat, T.1
Yu, J.2
Lazar, M.A.3
|