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Volumn 27, Issue 3, 2016, Pages 230-239

Characterization of the platelet transcriptome by RNA sequencing in patients with acute myocardial infarction

Author keywords

Gene expression; Myocardial infarction; Platelet aggregation; RNA seq

Indexed keywords

ACTIN; CARCINOEMBRYONIC ANTIGEN RELATED CELL ADHESION MOLECULE 1; COLLAGEN; GLUCOSE TRANSPORTER 3; POTASSIUM CHANNEL KCNE1; RNA; TRANSCRIPTION FACTOR ERG; TRANSCRIPTOME;

EID: 84941670799     PISSN: 09537104     EISSN: 13691635     Source Type: Journal    
DOI: 10.3109/09537104.2015.1083543     Document Type: Article
Times cited : (109)

References (60)
  • 1
    • 84865422206 scopus 로고    scopus 로고
    • Platelet mRNA: The meaning behind the message
    • Rowley JW, Schwertz H, Weyrich AS. Platelet mRNA: The meaning behind the message. Curr Opin Hematol 2012; 19 (5): 385-391
    • (2012) Curr Opin Hematol , vol.19 , Issue.5 , pp. 385-391
    • Rowley, J.W.1    Schwertz, H.2    Weyrich, A.S.3
  • 2
    • 2142699977 scopus 로고    scopus 로고
    • Megakaryocytes and beyond: The birth of platelets
    • Italiano Jr JE, Shivdasani RA. Megakaryocytes and beyond: The birth of platelets. J Thromb Haemost 2003; 1 (6): 1174-1182
    • (2003) J Thromb Haemost , vol.1 , Issue.6 , pp. 1174-1182
    • Italiano, J.E.1    Shivdasani, R.A.2
  • 3
    • 0142061000 scopus 로고    scopus 로고
    • Messenger RNA profiling of human platelets by microarray hybridization
    • Bugert P, Dugrillon A, Gunaydin A, Eichler H, Kluter H. Messenger RNA profiling of human platelets by microarray hybridization. Thromb Haemost 2003; 90 (4): 738-748
    • (2003) Thromb Haemost , vol.90 , Issue.4 , pp. 738-748
    • Bugert, P.1    Dugrillon, A.2    Gunaydin, A.3    Eichler, H.4    Kluter, H.5
  • 4
    • 0037443545 scopus 로고    scopus 로고
    • Transcript profiling of human platelets using microarray and serial analysis of gene expression
    • Gnatenko DV, Dunn JJ, McCorkle SR, Weissmann D, Perrotta PL, Bahou WF. Transcript profiling of human platelets using microarray and serial analysis of gene expression. Blood 2003; 101 (6): 2285-2293
    • (2003) Blood , vol.101 , Issue.6 , pp. 2285-2293
    • Gnatenko, D.V.1    Dunn, J.J.2    McCorkle, S.R.3    Weissmann, D.4    Perrotta, P.L.5    Bahou, W.F.6
  • 5
    • 58149302754 scopus 로고    scopus 로고
    • Genome-wide platelet RNA profiling in clinical samples
    • Schedel A, Rolf N. Genome-wide platelet RNA profiling in clinical samples. Methods Mol Biol 2009; 496: 273-283
    • (2009) Methods Mol Biol , vol.496 , pp. 273-283
    • Schedel, A.1    Rolf, N.2
  • 9
    • 84892564150 scopus 로고    scopus 로고
    • Next generation sequencing analysis of human platelet PolyA+ mRNAs and rRNA-depleted total RNA
    • Kissopoulou A, Jonasson J, Lindahl TL, Osman A. Next generation sequencing analysis of human platelet PolyA+ mRNAs and rRNA-depleted total RNA. PLoS One 2013; 8 (12): e81809
    • (2013) PLoS One , vol.8 , Issue.12 , pp. e81809
    • Kissopoulou, A.1    Jonasson, J.2    Lindahl, T.L.3    Osman, A.4
  • 10
    • 84904915119 scopus 로고    scopus 로고
    • A tour through the transcriptional landscape of platelets
    • Schubert S, Weyrich AS, Rowley JW. A tour through the transcriptional landscape of platelets. Blood 2014; 124 (4): 493-502
    • (2014) Blood , vol.124 , Issue.4 , pp. 493-502
    • Schubert, S.1    Weyrich, A.S.2    Rowley, J.W.3
  • 11
    • 37249068049 scopus 로고    scopus 로고
    • Platelet activation and atherothrombosis
    • Davi G, Patrono C. Platelet activation and atherothrombosis. N Engl J Med 2007; 357 (24): 2482-2494
    • (2007) N Engl J Med , vol.357 , Issue.24 , pp. 2482-2494
    • Davi, G.1    Patrono, C.2
  • 12
    • 67649749274 scopus 로고    scopus 로고
    • Importance of platelets and platelet response in acute coronary syndromes
    • Kottke-Marchant K. Importance of platelets and platelet response in acute coronary syndromes. Cleve Clin J Med 2009; 76: S2-S7
    • (2009) Cleve Clin J Med , vol.76 , pp. S2-S7
    • Kottke-Marchant, K.1
  • 16
    • 78650730189 scopus 로고    scopus 로고
    • Recent trends in the incidence, treatment, and outcomes of patients with STEMI and NSTEMI
    • McManus DD, Gore J, Yarzebski J, Spencer F, Lessard D, Goldberg RJ. Recent trends in the incidence, treatment, and outcomes of patients with STEMI and NSTEMI. Am J Med 2011; 124 (1): 40-47
    • (2011) Am J Med , vol.124 , Issue.1 , pp. 40-47
    • McManus, D.D.1    Gore, J.2    Yarzebski, J.3    Spencer, F.4    Lessard, D.5    Goldberg, R.J.6
  • 20
    • 27444431936 scopus 로고    scopus 로고
    • Resistance to aspirin is increased by ST-elevation myocardial infarction and correlates with adenosine diphosphate levels
    • Borna C, Lazarowski E, van HC, Ohlin H, Erlinge D. Resistance to aspirin is increased by ST-elevation myocardial infarction and correlates with adenosine diphosphate levels. Thromb J 2005; 3: 10
    • (2005) Thromb J , vol.3 , pp. 10
    • Borna, C.1    Lazarowski, E.2    Van, H.C.3    Ohlin, H.4    Erlinge, D.5
  • 22
    • 84910147922 scopus 로고    scopus 로고
    • Long noncoding RNAs in patients with acute myocardial infarction
    • Vausort M, Wagner DR, Devaux Y. Long noncoding RNAs in patients with acute myocardial infarction. Circ Res 2014; 115 (7): 668-677
    • (2014) Circ Res , vol.115 , Issue.7 , pp. 668-677
    • Vausort, M.1    Wagner, D.R.2    Devaux, Y.3
  • 23
    • 33744997382 scopus 로고    scopus 로고
    • Platelet expression profiling and clinical validation of myeloid-related protein-14 as a novel determinant of cardiovascular events
    • Healy AM, Pickard MD, Pradhan AD, Wang Y, Chen Z, Croce K, Sakuma M, Shi C, Zago AC, Garasic J, et al. Platelet expression profiling and clinical validation of myeloid-related protein-14 as a novel determinant of cardiovascular events. Circulation 2006; 113 (19): 2278-2284
    • (2006) Circulation , vol.113 , Issue.19 , pp. 2278-2284
    • Healy, A.M.1    Pickard, M.D.2    Pradhan, A.D.3    Wang, Y.4    Chen, Z.5    Croce, K.6    Sakuma, M.7    Shi, C.8    Zago, A.C.9    Garasic, J.10
  • 25
    • 0029846809 scopus 로고    scopus 로고
    • Alpha-tocopherol inhibits aggregation of human platelets by a protein kinase C-dependent mechanism
    • Freedman JE, Farhat JH, Loscalzo J, Keaney Jr JF. Alpha-tocopherol inhibits aggregation of human platelets by a protein kinase C-dependent mechanism. Circulation 1996; 94 (10): 2434-2440
    • (1996) Circulation , vol.94 , Issue.10 , pp. 2434-2440
    • Freedman, J.E.1    Farhat, J.H.2    Loscalzo, J.3    Keaney, J.F.4
  • 26
    • 84880617636 scopus 로고    scopus 로고
    • WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): Update 2013
    • W83
    • Wang J, Duncan D, Shi Z, Zhang B. WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): Update 2013. Nucleic Acids Res 2013; 41 (Web Server issue): W77-W83
    • (2013) Nucleic Acids Res , vol.41 , Issue.WEB SERVER ISSUE , pp. W77
    • Wang, J.1    Duncan, D.2    Shi, Z.3    Zhang, B.4
  • 27
    • 84858041341 scopus 로고    scopus 로고
    • Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
    • McCarthy DJ, Chen Y, Smyth GK. Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation. Nucleic Acids Res 2012; 40 (10): 4288-4297
    • (2012) Nucleic Acids Res , vol.40 , Issue.10 , pp. 4288-4297
    • McCarthy, D.J.1    Chen, Y.2    Smyth, G.K.3
  • 28
    • 84920550975 scopus 로고    scopus 로고
    • A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
    • SEQC-MAQC-III Consortium. A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium. Nat Biotechnol 2014; 32 (9): 903-914
    • (2014) Nat Biotechnol , vol.32 , Issue.9 , pp. 903-914
  • 30
    • 34247533748 scopus 로고    scopus 로고
    • Amplified expression profiling of platelet transcriptome reveals changes in arginine metabolic pathways in patients with sickle cell disease
    • Raghavachari N, Xu X, Harris A, Villagra J, Logun C, Barb J, Solomon MA, Suffredini AF, Danner RL, Kato G, et al. Amplified expression profiling of platelet transcriptome reveals changes in arginine metabolic pathways in patients with sickle cell disease. Circulation 2007; 115 (12): 1551-1562
    • (2007) Circulation , vol.115 , Issue.12 , pp. 1551-1562
    • Raghavachari, N.1    Xu, X.2    Harris, A.3    Villagra, J.4    Logun, C.5    Barb, J.6    Solomon, M.A.7    Suffredini, A.F.8    Danner, R.L.9    Kato, G.10
  • 36
    • 23944447124 scopus 로고    scopus 로고
    • Conditional overexpression of transgenes in megakaryocytes and platelets in vivo
    • Nguyen HG, Yu G, Makitalo M, Yang D, Xie HX, Jones MR, Ravid K. Conditional overexpression of transgenes in megakaryocytes and platelets in vivo. Blood 2005; 106 (5): 1559-1564
    • (2005) Blood , vol.106 , Issue.5 , pp. 1559-1564
    • Nguyen, H.G.1    Yu, G.2    Makitalo, M.3    Yang, D.4    Xie, H.X.5    Jones, M.R.6    Ravid, K.7
  • 39
    • 65349165222 scopus 로고    scopus 로고
    • ETS2 and ERG promote megakaryopoiesis and synergize with alterations in GATA-1 to immortalize hematopoietic progenitor cells
    • Stankiewicz MJ, Crispino JD. ETS2 and ERG promote megakaryopoiesis and synergize with alterations in GATA-1 to immortalize hematopoietic progenitor cells. Blood 2009; 113 (14): 3337-3347
    • (2009) Blood , vol.113 , Issue.14 , pp. 3337-3347
    • Stankiewicz, M.J.1    Crispino, J.D.2
  • 43
    • 0031282321 scopus 로고    scopus 로고
    • Interaction of matrix metalloproteinases-2 and -9 with pregnancy zone protein and alpha2-macroglobulin
    • Arbelaez LF, Bergmann U, Tuuttila A, Shanbhag VP, Stigbrand T. Interaction of matrix metalloproteinases-2 and -9 with pregnancy zone protein and alpha2-macroglobulin. Arch Biochem Biophys 1997; 347 (1): 62-68
    • (1997) Arch Biochem Biophys , vol.347 , Issue.1 , pp. 62-68
    • Arbelaez, L.F.1    Bergmann, U.2    Tuuttila, A.3    Shanbhag, V.P.4    Stigbrand, T.5
  • 44
    • 11144226401 scopus 로고    scopus 로고
    • Platelet activation induces metalloproteinase-dependent GP VI cleavage to down-regulate platelet reactivity to collagen
    • Stephens G, Yan Y, Jandrot-Perrus M, Villeval JL, Clemetson KJ, Phillips DR. Platelet activation induces metalloproteinase-dependent GP VI cleavage to down-regulate platelet reactivity to collagen. Blood 2005; 105 (1): 186-191
    • (2005) Blood , vol.105 , Issue.1 , pp. 186-191
    • Stephens, G.1    Yan, Y.2    Jandrot-Perrus, M.3    Villeval, J.L.4    Clemetson, K.J.5    Phillips, D.R.6
  • 45
    • 40949114110 scopus 로고    scopus 로고
    • The highly specific platelet glycoprotein (GP) VI agonist trowaglerix impaired collagen-induced platelet aggregation ex vivo through matrix metalloproteinase-dependent GPVI shedding
    • Chang CH, Chung CH, Kuo HL, Hsu CC, Huang TF. The highly specific platelet glycoprotein (GP) VI agonist trowaglerix impaired collagen-induced platelet aggregation ex vivo through matrix metalloproteinase-dependent GPVI shedding. J Thromb Haemost 2008; 6 (4): 669-676
    • (2008) J Thromb Haemost , vol.6 , Issue.4 , pp. 669-676
    • Chang, C.H.1    Chung, C.H.2    Kuo, H.L.3    Hsu, C.C.4    Huang, T.F.5
  • 49
    • 79960638531 scopus 로고    scopus 로고
    • The genetics of common variation affecting platelet development, function and pharmaceutical targeting
    • Johnson AD. The genetics of common variation affecting platelet development, function and pharmaceutical targeting. J Thromb Haemost 2011; 9 (Suppl 1): 246-257
    • (2011) J Thromb Haemost , vol.9 , pp. 246-257
    • Johnson, A.D.1
  • 51
    • 0030798401 scopus 로고    scopus 로고
    • Thrombin stimulates glucose transport in human platelets via the translocation of the glucose transporter GLUT-3 from alpha-granules to the cell surface
    • Heijnen HF, Oorschot V, Sixma JJ, Slot JW, James DE. Thrombin stimulates glucose transport in human platelets via the translocation of the glucose transporter GLUT-3 from alpha-granules to the cell surface. J Cell Biol 1997; 138 (2): 323-330
    • (1997) J Cell Biol , vol.138 , Issue.2 , pp. 323-330
    • Heijnen, H.F.1    Oorschot, V.2    Sixma, J.J.3    Slot, J.W.4    James, D.E.5
  • 53
    • 61849174684 scopus 로고    scopus 로고
    • CEACAM1 negatively regulates platelet-collagen interactions and thrombus growth in vitro and in vivo
    • Wong C, Liu Y, Yip J, Chand R, Wee JL, Oates L, Nieswandt B, Reheman A, Ni H, Beauchemin N, et al. CEACAM1 negatively regulates platelet-collagen interactions and thrombus growth in vitro and in vivo. Blood 2009; 113 (8): 1818-1828
    • (2009) Blood , vol.113 , Issue.8 , pp. 1818-1828
    • Wong, C.1    Liu, Y.2    Yip, J.3    Chand, R.4    Wee, J.L.5    Oates, L.6    Nieswandt, B.7    Reheman, A.8    Ni, H.9    Beauchemin, N.10
  • 54
    • 0023901114 scopus 로고
    • Immunohistochemical localization of cellCAM 105 in rat tissues: Appearance in epithelia, platelets, and granulocytes
    • Odin P, Asplund M, Busch C, Obrink B. Immunohistochemical localization of cellCAM 105 in rat tissues: Appearance in epithelia, platelets, and granulocytes. J Histochem Cytochem 1988; 36 (7): 729-739
    • (1988) J Histochem Cytochem , vol.36 , Issue.7 , pp. 729-739
    • Odin, P.1    Asplund, M.2    Busch, C.3    Obrink, B.4
  • 55
    • 84911948895 scopus 로고    scopus 로고
    • Alpha2beta1 integrin, GPVI receptor, and common FcRgamma chain on mouse platelets mediate distinct responses to collagen in models of thrombosis
    • Marjoram RJ, Li Z, He L, Tollefsen DM, Kunicki TJ, Dickeson SK, Santoro SA, Zutter MM. Alpha2beta1 integrin, GPVI receptor, and common FcRgamma chain on mouse platelets mediate distinct responses to collagen in models of thrombosis. PLoS One 2014; 9 (11): e114035
    • (2014) PLoS One , vol.9 , Issue.11 , pp. e114035
    • Marjoram, R.J.1    Li, Z.2    He, L.3    Tollefsen, D.M.4    Kunicki, T.J.5    Dickeson, S.K.6    Santoro, S.A.7    Zutter, M.M.8
  • 56
    • 0037192771 scopus 로고    scopus 로고
    • Integrin alpha 2-deficient mice develop normally, are fertile, but display partially defective platelet interaction with collagen
    • Holtkotter O, Nieswandt B, Smyth N, Muller W, Hafner M, Schulte V, Krieg T, Eckes B. Integrin alpha 2-deficient mice develop normally, are fertile, but display partially defective platelet interaction with collagen. J Biol Chem 2002; 277 (13): 10789-10794
    • (2002) J Biol Chem , vol.277 , Issue.13 , pp. 10789-10794
    • Holtkotter, O.1    Nieswandt, B.2    Smyth, N.3    Muller, W.4    Hafner, M.5    Schulte, V.6    Krieg, T.7    Eckes, B.8
  • 59
    • 0032462002 scopus 로고    scopus 로고
    • Evidence for distinct signaling properties and biological responses induced by the PDGF receptor alpha and beta subtypes
    • Rosenkranz S, Kazlauskas A. Evidence for distinct signaling properties and biological responses induced by the PDGF receptor alpha and beta subtypes. Growth Factors 1999; 16 (3): 201-216
    • (1999) Growth Factors , vol.16 , Issue.3 , pp. 201-216
    • Rosenkranz, S.1    Kazlauskas, A.2
  • 60


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