-
1
-
-
84865757142
-
Landscape of transcription in human cells
-
S. Djebali, C.A. Davis, A. Merkel, A. Dobin, T. Lassmann, A. Mortazavi, A. Tanzer, J. Lagarde, W. Lin, F. Schlesinger, and et al. Landscape of transcription in human cells Nature 489 2012 101 108
-
(2012)
Nature
, vol.489
, pp. 101-108
-
-
Djebali, S.1
Davis, C.A.2
Merkel, A.3
Dobin, A.4
Lassmann, T.5
Mortazavi, A.6
Tanzer, A.7
Lagarde, J.8
Lin, W.9
Schlesinger, F.10
-
2
-
-
34748869000
-
Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome
-
N. Sela, B. Mersch, N. Gal-Mark, G. Lev-Maor, A. Hotz-Wagenblatt, and G. Ast Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome Genome Biol. 8 2007 R127
-
(2007)
Genome Biol.
, vol.8
, pp. R127
-
-
Sela, N.1
Mersch, B.2
Gal-Mark, N.3
Lev-Maor, G.4
Hotz-Wagenblatt, A.5
Ast, G.6
-
3
-
-
2342437120
-
Alu repeat analysis in the complete human genome: Trends and variations with respect to genomic composition
-
D. Grover, M. Mukerji, P. Bhatnagar, K. Kannan, and S.K. Brahmachari Alu repeat analysis in the complete human genome: trends and variations with respect to genomic composition Bioinformatics 20 2004 813 817
-
(2004)
Bioinformatics
, vol.20
, pp. 813-817
-
-
Grover, D.1
Mukerji, M.2
Bhatnagar, P.3
Kannan, K.4
Brahmachari, S.K.5
-
4
-
-
0023666074
-
A developmentally regulated activity that unwinds RNA duplexes
-
B.L. Bass, and H. Weintraub A developmentally regulated activity that unwinds RNA duplexes Cell 48 1987 607 613
-
(1987)
Cell
, vol.48
, pp. 607-613
-
-
Bass, B.L.1
Weintraub, H.2
-
5
-
-
0031230642
-
A standardized nomenclature for adenosine deaminases that act on RNA
-
B.L. Bass, K. Nishikura, W. Keller, P.H. Seeburg, R.B. Emeson, M.A. O'Connell, C.E. Samuel, and A. Herbert A standardized nomenclature for adenosine deaminases that act on RNA RNA 3 1997 947 949
-
(1997)
RNA
, vol.3
, pp. 947-949
-
-
Bass, B.L.1
Nishikura, K.2
Keller, W.3
Seeburg, P.H.4
Emeson, R.B.5
O'Connell, M.A.6
Samuel, C.E.7
Herbert, A.8
-
6
-
-
0028360566
-
Purification and characterization of double-stranded RNA adenosine deaminase from bovine nuclear extracts
-
U. Kim, T.L. Garner, T. Sanford, D. Speicher, J.M. Murray, and K. Nishikura Purification and characterization of double-stranded RNA adenosine deaminase from bovine nuclear extracts J. Biol. Chem. 269 1994 13480 13489
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 13480-13489
-
-
Kim, U.1
Garner, T.L.2
Sanford, T.3
Speicher, D.4
Murray, J.M.5
Nishikura, K.6
-
7
-
-
0028872727
-
Cloning of cDNAs encoding mammalian double-stranded RNA-specific adenosine deaminase
-
M.A. O'Connell, S. Krause, M. Higuchi, J.J. Hsuan, N.F. Totty, A. Jenny, and W. Keller Cloning of cDNAs encoding mammalian double-stranded RNA-specific adenosine deaminase Mol. Cell. Biol. 15 1995 1389 1397
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 1389-1397
-
-
O'Connell, M.A.1
Krause, S.2
Higuchi, M.3
Hsuan, J.J.4
Totty, N.F.5
Jenny, A.6
Keller, W.7
-
8
-
-
0030051809
-
A mammalian RNA editing enzyme
-
T. Melcher, S. Maas, A. Herb, R. Sprengel, P.H. Seeburg, and M. Higuchi A mammalian RNA editing enzyme Nature 379 1996 460 464
-
(1996)
Nature
, vol.379
, pp. 460-464
-
-
Melcher, T.1
Maas, S.2
Herb, A.3
Sprengel, R.4
Seeburg, P.H.5
Higuchi, M.6
-
9
-
-
0038664237
-
Dynamic association of RNA-editing enzymes with the nucleolus
-
J.M. Desterro, L.P. Keegan, M. Lafarga, M.T. Berciano, M. O'Connell, and M. Carmo-Fonseca Dynamic association of RNA-editing enzymes with the nucleolus J. Cell Sci. 116 2003 1805 1818
-
(2003)
J. Cell Sci.
, vol.116
, pp. 1805-1818
-
-
Desterro, J.M.1
Keegan, L.P.2
Lafarga, M.3
Berciano, M.T.4
O'Connell, M.5
Carmo-Fonseca, M.6
-
10
-
-
0029164692
-
Expression and regulation by interferon of a double-stranded-RNA-specific adenosine deaminase from human cells: Evidence for two forms of the deaminase
-
J.B. Patterson, and C.E. Samuel Expression and regulation by interferon of a double-stranded-RNA-specific adenosine deaminase from human cells: evidence for two forms of the deaminase Mol. Cell. Biol. 15 1995 5376 5388
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 5376-5388
-
-
Patterson, J.B.1
Samuel, C.E.2
-
11
-
-
0034779253
-
CRM1 mediates the export of ADAR1 through a nuclear export signal within the Z-DNA binding domain
-
H. Poulsen, J. Nilsson, C.K. Damgaard, J. Egebjerg, and J. Kjems CRM1 mediates the export of ADAR1 through a nuclear export signal within the Z-DNA binding domain Mol. Cell. Biol. 21 2001 7862 7871
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 7862-7871
-
-
Poulsen, H.1
Nilsson, J.2
Damgaard, C.K.3
Egebjerg, J.4
Kjems, J.5
-
12
-
-
0345133268
-
Modulation of RNA editing by functional nucleolar sequestration of ADAR2
-
C.L. Sansam, K.S. Wells, and R.B. Emeson Modulation of RNA editing by functional nucleolar sequestration of ADAR2 Proc. Natl. Acad. Sci. U. S. A. 100 2003 14018 14023
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 14018-14023
-
-
Sansam, C.L.1
Wells, K.S.2
Emeson, R.B.3
-
13
-
-
0001343966
-
Synthetic polynucleotides and the amino acid code. V
-
C. Basilio, A.J. Wahba, P. Lengyel, J.F. Speyer, and S. Ochoa Synthetic polynucleotides and the amino acid code. V Proc. Natl. Acad. Sci. U. S. A. 48 1962 613 616
-
(1962)
Proc. Natl. Acad. Sci. U. S. A.
, vol.48
, pp. 613-616
-
-
Basilio, C.1
Wahba, A.J.2
Lengyel, P.3
Speyer, J.F.4
Ochoa, S.5
-
14
-
-
66349122954
-
Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing
-
J.B. Li, E.Y. Levanon, J.K. Yoon, J. Aach, B. Xie, E. Leproust, K. Zhang, Y. Gao, and G.M. Church Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing Science 324 2009 1210 1213
-
(2009)
Science
, vol.324
, pp. 1210-1213
-
-
Li, J.B.1
Levanon, E.Y.2
Yoon, J.K.3
Aach, J.4
Xie, B.5
Leproust, E.6
Zhang, K.7
Gao, Y.8
Church, G.M.9
-
15
-
-
0027967784
-
Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase
-
A.G. Polson, and B.L. Bass Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase EMBO J. 13 1994 5701 5711
-
(1994)
EMBO J.
, vol.13
, pp. 5701-5711
-
-
Polson, A.G.1
Bass, B.L.2
-
16
-
-
0344012481
-
ADAR2 A - >i editing: Site selectivity and editing efficiency are separate events
-
A.M. Källman, M. Sahlin, and M. Öhman ADAR2 A - >I editing: site selectivity and editing efficiency are separate events Nucleic Acids Res. 31 2003 4874 4881
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 4874-4881
-
-
Källman, A.M.1
Sahlin, M.2
Öhman, M.3
-
17
-
-
84857730206
-
Site-selective versus promiscuous A-to-I editing
-
H. Wahlstedt, and M. Öhman Site-selective versus promiscuous A-to-I editing Wiley Interdiscip. Rev. RNA 2 2011 761 771
-
(2011)
Wiley Interdiscip. Rev. RNA
, vol.2
, pp. 761-771
-
-
Wahlstedt, H.1
Öhman, M.2
-
18
-
-
84865172834
-
Transcript diversification in the nervous system: A to i RNA editing in CNS function and disease development
-
A. Tariq, and M.F. Jantsch Transcript diversification in the nervous system: a to I RNA editing in CNS function and disease development Front. Neurosci. 6 2012 99
-
(2012)
Front. Neurosci.
, vol.6
, pp. 99
-
-
Tariq, A.1
Jantsch, M.F.2
-
19
-
-
12344300804
-
Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome
-
A. Athanasiadis, A. Rich, and S. Maas Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome PLoS Biol. 2 2004 e391
-
(2004)
PLoS Biol.
, vol.2
, pp. e391
-
-
Athanasiadis, A.1
Rich, A.2
Maas, S.3
-
21
-
-
4644324088
-
Widespread RNA editing of embedded Alu elements in the human transcriptome
-
D.D. Kim, T.T. Kim, T. Walsh, Y. Kobayashi, T.C. Matise, S. Buyske, and A. Gabriel Widespread RNA editing of embedded Alu elements in the human transcriptome Genome Res. 14 2004 1719 1725
-
(2004)
Genome Res.
, vol.14
, pp. 1719-1725
-
-
Kim, D.D.1
Kim, T.T.2
Walsh, T.3
Kobayashi, Y.4
Matise, T.C.5
Buyske, S.6
Gabriel, A.7
-
22
-
-
3543004084
-
Systematic identification of abundant A-to-I editing sites in the human transcriptome
-
E.Y. Levanon, E. Eisenberg, R. Yelin, S. Nemzer, M. Hallegger, R. Shemesh, Z.Y. Fligelman, A. Shoshan, S.R. Pollock, D. Sztybel, and et al. Systematic identification of abundant A-to-I editing sites in the human transcriptome Nat. Biotechnol. 22 2004 1001 1005
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 1001-1005
-
-
Levanon, E.Y.1
Eisenberg, E.2
Yelin, R.3
Nemzer, S.4
Hallegger, M.5
Shemesh, R.6
Fligelman, Z.Y.7
Shoshan, A.8
Pollock, S.R.9
Sztybel, D.10
-
23
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
E.S. Lander, L.M. Linton, B. Birren, C. Nusbaum, M.C. Zody, J. Baldwin, K. Devon, K. Dewar, M. Doyle, W. FitzHugh, and et al. Initial sequencing and analysis of the human genome Nature 409 2001 860 921
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
FitzHugh, W.10
-
24
-
-
67649982842
-
Mobile elements create structural variation: Analysis of a complete human genome
-
J. Xing, Y. Zhang, K. Han, A.H. Salem, S.K. Sen, C.D. Huff, Q. Zhou, E.F. Kirkness, S. Levy, M.A. Batzer, and et al. Mobile elements create structural variation: analysis of a complete human genome Genome Res. 19 2009 1516 1526
-
(2009)
Genome Res.
, vol.19
, pp. 1516-1526
-
-
Xing, J.1
Zhang, Y.2
Han, K.3
Salem, A.H.4
Sen, S.K.5
Huff, C.D.6
Zhou, Q.7
Kirkness, E.F.8
Levy, S.9
Batzer, M.A.10
-
25
-
-
0021127698
-
Alu sequences are processed 7SL RNA genes
-
E. Ullu, and C. Tschudi Alu sequences are processed 7SL RNA genes Nature 312 1984 171 172
-
(1984)
Nature
, vol.312
, pp. 171-172
-
-
Ullu, E.1
Tschudi, C.2
-
26
-
-
33947649553
-
Evolutionary history of 7SL RNA-derived SINEs in Supraprimates
-
J.O. Kriegs, G. Churakov, J. Jurka, J. Brosius, and J. Schmitz Evolutionary history of 7SL RNA-derived SINEs in Supraprimates Trends Genet. 23 2007 158 161
-
(2007)
Trends Genet.
, vol.23
, pp. 158-161
-
-
Kriegs, J.O.1
Churakov, G.2
Jurka, J.3
Brosius, J.4
Schmitz, J.5
-
27
-
-
0023478607
-
Existence of at least three distinct Alu subfamilies
-
C. Willard, H.T. Nguyen, and C.W. Schmid Existence of at least three distinct Alu subfamilies J. Mol. Evol. 26 1987 180 186
-
(1987)
J. Mol. Evol.
, vol.26
, pp. 180-186
-
-
Willard, C.1
Nguyen, H.T.2
Schmid, C.W.3
-
29
-
-
0342298816
-
A fundamental division in the Alu family of repeated sequences
-
J. Jurka, and T. Smith A fundamental division in the Alu family of repeated sequences Proc. Natl. Acad. Sci. U. S. A. 85 1988 4775 4778
-
(1988)
Proc. Natl. Acad. Sci. U. S. A.
, vol.85
, pp. 4775-4778
-
-
Jurka, J.1
Smith, T.2
-
30
-
-
0024558422
-
Sequence conservation in Alu evolution
-
D. Labuda, and G. Striker Sequence conservation in Alu evolution Nucleic Acids Res. 17 1989 2477 2491
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 2477-2491
-
-
Labuda, D.1
Striker, G.2
-
31
-
-
33645464594
-
Recently mobilized transposons in the human and chimpanzee genomes
-
R.E. Mills, E.A. Bennett, R.C. Iskow, C.T. Luttig, C. Tsui, W.S. Pittard, and S.E. Devine Recently mobilized transposons in the human and chimpanzee genomes Am. J. Hum. Genet. 78 2006 671 679
-
(2006)
Am. J. Hum. Genet.
, vol.78
, pp. 671-679
-
-
Mills, R.E.1
Bennett, E.A.2
Iskow, R.C.3
Luttig, C.T.4
Tsui, C.5
Pittard, W.S.6
Devine, S.E.7
-
32
-
-
0021333080
-
Structure and distribution of Alu family sequences or their analogs within heterogeneous nuclear RNA of HeLa, KB, and L cells
-
H.D. Robertson, and E. Dickson Structure and distribution of Alu family sequences or their analogs within heterogeneous nuclear RNA of HeLa, KB, and L cells Mol. Cell. Biol. 4 1984 310 316
-
(1984)
Mol. Cell. Biol.
, vol.4
, pp. 310-316
-
-
Robertson, H.D.1
Dickson, E.2
-
33
-
-
84895535383
-
A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes
-
L. Bazak, A. Haviv, M. Barak, J. Jacob-Hirsch, P. Deng, R. Zhang, F.J. Isaacs, G. Rechavi, J.B. Li, E. Eisenberg, and et al. A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes Genome Res. 24 2014 365 376
-
(2014)
Genome Res.
, vol.24
, pp. 365-376
-
-
Bazak, L.1
Haviv, A.2
Barak, M.3
Jacob-Hirsch, J.4
Deng, P.5
Zhang, R.6
Isaacs, F.J.7
Rechavi, G.8
Li, J.B.9
Eisenberg, E.10
-
34
-
-
33749256772
-
RNA editing level in the mouse is determined by the genomic repeat repertoire
-
Y. Neeman, E.Y. Levanon, M.F. Jantsch, and E. Eisenberg RNA editing level in the mouse is determined by the genomic repeat repertoire RNA 12 2006 1802 1809
-
(2006)
RNA
, vol.12
, pp. 1802-1809
-
-
Neeman, Y.1
Levanon, E.Y.2
Jantsch, M.F.3
Eisenberg, E.4
-
35
-
-
84873414540
-
Identifying RNA editing sites using RNA sequencing data alone
-
G. Ramaswami, R. Zhang, R. Piskol, L.P. Keegan, P. Deng, M.A. O'Connell, and J.B. Li Identifying RNA editing sites using RNA sequencing data alone Nat. Methods 10 2013 128 132
-
(2013)
Nat. Methods
, vol.10
, pp. 128-132
-
-
Ramaswami, G.1
Zhang, R.2
Piskol, R.3
Keegan, L.P.4
Deng, P.5
O'Connell, M.A.6
Li, J.B.7
-
36
-
-
0026713151
-
Interactions between double-stranded RNA regulators and the protein kinase DAI
-
L. Manche, S.R. Green, C. Schmedt, and M.B. Mathews Interactions between double-stranded RNA regulators and the protein kinase DAI Mol. Cell. Biol. 12 1992 5238 5248
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 5238-5248
-
-
Manche, L.1
Green, S.R.2
Schmedt, C.3
Mathews, M.B.4
-
37
-
-
79551687500
-
Regulation of innate immunity through RNA structure and the protein kinase PKR
-
S.R. Nallagatla, R. Toroney, and P.C. Bevilacqua Regulation of innate immunity through RNA structure and the protein kinase PKR Curr. Opin. Struct. Biol. 21 2011 119 127
-
(2011)
Curr. Opin. Struct. Biol.
, vol.21
, pp. 119-127
-
-
Nallagatla, S.R.1
Toroney, R.2
Bevilacqua, P.C.3
-
38
-
-
0035942736
-
Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
-
S.M. Elbashir, J. Harborth, W. Lendeckel, A. Yalcin, K. Weber, and T. Tuschl Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells Nature 411 2001 494 498
-
(2001)
Nature
, vol.411
, pp. 494-498
-
-
Elbashir, S.M.1
Harborth, J.2
Lendeckel, W.3
Yalcin, A.4
Weber, K.5
Tuschl, T.6
-
39
-
-
84902459372
-
PKR is activated by cellular dsRNAs during mitosis and acts as a mitotic regulator
-
Y. Kim, J.H. Lee, J.E. Park, J. Cho, H. Yi, and V.N. Kim PKR is activated by cellular dsRNAs during mitosis and acts as a mitotic regulator Genes Dev. 28 2014 1310 1322
-
(2014)
Genes Dev.
, vol.28
, pp. 1310-1322
-
-
Kim, Y.1
Lee, J.H.2
Park, J.E.3
Cho, J.4
Yi, H.5
Kim, V.N.6
-
40
-
-
84912098781
-
The RNA-editing enzyme ADAR1 controls innate immune responses to RNA
-
N.M. Mannion, S.M. Greenwood, R. Young, S. Cox, J. Brindle, D. Read, C. Nellaker, C. Vesely, C.P. Ponting, P.J. McLaughlin, and et al. The RNA-editing enzyme ADAR1 controls innate immune responses to RNA Cell Rep. 9 2014 1482 1494
-
(2014)
Cell Rep.
, vol.9
, pp. 1482-1494
-
-
Mannion, N.M.1
Greenwood, S.M.2
Young, R.3
Cox, S.4
Brindle, J.5
Read, D.6
Nellaker, C.7
Vesely, C.8
Ponting, C.P.9
McLaughlin, P.J.10
-
41
-
-
0033569878
-
Prenylated prelamin A interacts with Narf, a novel nuclear protein
-
R.M. Barton, and H.J. Worman Prenylated prelamin A interacts with Narf, a novel nuclear protein J. Biol. Chem. 274 1999 30008 30018
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 30008-30018
-
-
Barton, R.M.1
Worman, H.J.2
-
42
-
-
34247388679
-
RNA-editing-mediated exon evolution
-
G. Lev-Maor, R. Sorek, E.Y. Levanon, N. Paz, E. Eisenberg, and G. Ast RNA-editing-mediated exon evolution Genome Biol. 8 2007 R29
-
(2007)
Genome Biol.
, vol.8
, pp. R29
-
-
Lev-Maor, G.1
Sorek, R.2
Levanon, E.Y.3
Paz, N.4
Eisenberg, E.5
Ast, G.6
-
43
-
-
37349077216
-
The "alternative" choice of constitutive exons throughout evolution
-
G. Lev-Maor, A. Goren, N. Sela, E. Kim, H. Keren, A. Doron-Faigenboim, S. Leibman-Barak, T. Pupko, and G. Ast The "alternative" choice of constitutive exons throughout evolution PLoS Genet. 3 2007 e203
-
(2007)
PLoS Genet.
, vol.3
, pp. e203
-
-
Lev-Maor, G.1
Goren, A.2
Sela, N.3
Kim, E.4
Keren, H.5
Doron-Faigenboim, A.6
Leibman-Barak, S.7
Pupko, T.8
Ast, G.9
-
44
-
-
84896707317
-
Alu elements shape the primate transcriptome by cis-regulation of RNA editing
-
C. Daniel, G. Silberberg, M. Behm, and M. Öhman Alu elements shape the primate transcriptome by cis-regulation of RNA editing Genome Biol. 15 2014 R28
-
(2014)
Genome Biol.
, vol.15
, pp. R28
-
-
Daniel, C.1
Silberberg, G.2
Behm, M.3
Öhman, M.4
-
45
-
-
78650542645
-
RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1
-
J. Yeo, R.A. Goodman, N.T. Schirle, S.S. David, and P.A. Beal RNA editing changes the lesion specificity for the DNA repair enzyme NEIL1 Proc. Natl. Acad. Sci. U. S. A. 107 2010 20715 20719
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 20715-20719
-
-
Yeo, J.1
Goodman, R.A.2
Schirle, N.T.3
David, S.S.4
Beal, P.A.5
-
46
-
-
84874622310
-
RNA editing of the GLI1 transcription factor modulates the output of Hedgehog signaling
-
T. Shimokawa, M.F. Rahman, U. Tostar, E. Sonkoly, M. Stahle, A. Pivarcsi, R. Palaniswamy, and P.G. Zaphiropoulos RNA editing of the GLI1 transcription factor modulates the output of Hedgehog signaling RNA Biol. 10 2013 321 333
-
(2013)
RNA Biol.
, vol.10
, pp. 321-333
-
-
Shimokawa, T.1
Rahman, M.F.2
Tostar, U.3
Sonkoly, E.4
Stahle, M.5
Pivarcsi, A.6
Palaniswamy, R.7
Zaphiropoulos, P.G.8
-
47
-
-
34247372269
-
Editing modifies the GABA(A) receptor subunit alpha3
-
J. Ohlson, J.S. Pedersen, D. Haussler, and M. Öhman Editing modifies the GABA(A) receptor subunit alpha3 RNA 13 2007 698 703
-
(2007)
RNA
, vol.13
, pp. 698-703
-
-
Ohlson, J.1
Pedersen, J.S.2
Haussler, D.3
Öhman, M.4
-
48
-
-
66449129109
-
Large-scale mRNA sequencing determines global regulation of RNA editing during brain development
-
H. Wahlstedt, C. Daniel, M. Ensterö, and M. Öhman Large-scale mRNA sequencing determines global regulation of RNA editing during brain development Genome Res. 19 2009 978 986
-
(2009)
Genome Res.
, vol.19
, pp. 978-986
-
-
Wahlstedt, H.1
Daniel, C.2
Ensterö, M.3
Öhman, M.4
-
49
-
-
61649118956
-
RNA editing of the GABA(A) receptor alpha3 subunit alters the functional properties of recombinant receptors
-
M.L. Nimmich, L.S. Heidelberg, and J.L. Fisher RNA editing of the GABA(A) receptor alpha3 subunit alters the functional properties of recombinant receptors Neurosci. Res. 63 2009 288 293
-
(2009)
Neurosci. Res.
, vol.63
, pp. 288-293
-
-
Nimmich, M.L.1
Heidelberg, L.S.2
Fisher, J.L.3
-
50
-
-
46749107511
-
Developmental modulation of GABA(A) receptor function by RNA editing
-
E.Y. Rula, A.H. Lagrange, M.M. Jacobs, N. Hu, R.L. Macdonald, and R.B. Emeson Developmental modulation of GABA(A) receptor function by RNA editing J. Neurosci. 28 2008 6196 6201
-
(2008)
J. Neurosci.
, vol.28
, pp. 6196-6201
-
-
Rula, E.Y.1
Lagrange, A.H.2
Jacobs, M.M.3
Hu, N.4
MacDonald, R.L.5
Emeson, R.B.6
-
51
-
-
78751534192
-
Adenosine-to-inosine RNA editing affects trafficking of the gamma-aminobutyric acid type A (GABA(A)) receptor
-
C. Daniel, H. Wahlstedt, J. Ohlson, P. Bjork, and M. Öhman Adenosine-to-inosine RNA editing affects trafficking of the gamma-aminobutyric acid type A (GABA(A)) receptor J. Biol. Chem. 286 2011 2031 2040
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 2031-2040
-
-
Daniel, C.1
Wahlstedt, H.2
Ohlson, J.3
Bjork, P.4
Öhman, M.5
-
52
-
-
84868106296
-
A distant cis acting intronic element induces site-selective RNA editing
-
C. Daniel, M.T. Venø, Y. Ekdahl, J. Kjems, and M. Öhman A distant cis acting intronic element induces site-selective RNA editing Nucleic Acids Res. 40 2012 9876 9886
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 9876-9886
-
-
Daniel, C.1
Venø, M.T.2
Ekdahl, Y.3
Kjems, J.4
Öhman, M.5
-
53
-
-
0027772363
-
RNA editing of AMPA receptor subunit GluR-B: A base-paired intron-exon structure determines position and efficiency
-
M. Higuchi, F.N. Single, M. Köhler, B. Sommer, R. Sprengel, and P.H. Seeburg RNA editing of AMPA receptor subunit GluR-B: a base-paired intron-exon structure determines position and efficiency Cell 75 1993 1361 1370
-
(1993)
Cell
, vol.75
, pp. 1361-1370
-
-
Higuchi, M.1
Single, F.N.2
Köhler, M.3
Sommer, B.4
Sprengel, R.5
Seeburg, P.H.6
-
54
-
-
0029610443
-
Early-onset epilepsy and postnatal lethality associated with an editing- deficient GluR-B allele in mice
-
R. Brusa, F. Zimmermann, D.S. Koh, D. Feldmeyer, P. Gass, P.H. Seeburg, and R. Sprengel Early-onset epilepsy and postnatal lethality associated with an editing- deficient GluR-B allele in mice Science 270 1995 1677 1680
-
(1995)
Science
, vol.270
, pp. 1677-1680
-
-
Brusa, R.1
Zimmermann, F.2
Koh, D.S.3
Feldmeyer, D.4
Gass, P.5
Seeburg, P.H.6
Sprengel, R.7
-
55
-
-
0025976493
-
Scrambled exons
-
J.M. Nigro, K.R. Cho, E.R. Fearon, S.E. Kern, J.M. Ruppert, J.D. Oliner, K.W. Kinzler, and B. Vogelstein Scrambled exons Cell 64 1991 607 613
-
(1991)
Cell
, vol.64
, pp. 607-613
-
-
Nigro, J.M.1
Cho, K.R.2
Fearon, E.R.3
Kern, S.E.4
Ruppert, J.M.5
Oliner, J.D.6
Kinzler, K.W.7
Vogelstein, B.8
-
57
-
-
0027158771
-
Circular transcripts of the testis-determining gene Sry in adult mouse testis
-
B. Capel, A. Swain, S. Nicolis, A. Hacker, M. Walter, P. Koopman, P. Goodfellow, and R. Lovell-Badge Circular transcripts of the testis-determining gene Sry in adult mouse testis Cell 73 1993 1019 1030
-
(1993)
Cell
, vol.73
, pp. 1019-1030
-
-
Capel, B.1
Swain, A.2
Nicolis, S.3
Hacker, A.4
Walter, M.5
Koopman, P.6
Goodfellow, P.7
Lovell-Badge, R.8
-
58
-
-
84875372911
-
Natural RNA circles function as efficient microRNA sponges
-
T.B. Hansen, T.I. Jensen, B.H. Clausen, J.B. Bramsen, B. Finsen, C.K. Damgaard, and J. Kjems Natural RNA circles function as efficient microRNA sponges Nature 495 2013 384 388
-
(2013)
Nature
, vol.495
, pp. 384-388
-
-
Hansen, T.B.1
Jensen, T.I.2
Clausen, B.H.3
Bramsen, J.B.4
Finsen, B.5
Damgaard, C.K.6
Kjems, J.7
-
59
-
-
84875369248
-
Circular RNAs are a large class of animal RNAs with regulatory potency
-
S. Memczak, M. Jens, A. Elefsinioti, F. Torti, J. Krueger, A. Rybak, L. Maier, S.D. Mackowiak, L.H. Gregersen, M. Munschauer, and et al. Circular RNAs are a large class of animal RNAs with regulatory potency Nature 495 2013 333 338
-
(2013)
Nature
, vol.495
, pp. 333-338
-
-
Memczak, S.1
Jens, M.2
Elefsinioti, A.3
Torti, F.4
Krueger, J.5
Rybak, A.6
Maier, L.7
MacKowiak, S.D.8
Gregersen, L.H.9
Munschauer, M.10
-
60
-
-
84872531655
-
Circular RNAs are abundant, conserved, and associated with Alu repeats
-
W.R. Jeck, J.A. Sorrentino, K. Wang, M.K. Slevin, C.E. Burd, J. Liu, W.F. Marzluff, and N.E. Sharpless Circular RNAs are abundant, conserved, and associated with Alu repeats RNA 19 2013 141 157
-
(2013)
RNA
, vol.19
, pp. 141-157
-
-
Jeck, W.R.1
Sorrentino, J.A.2
Wang, K.3
Slevin, M.K.4
Burd, C.E.5
Liu, J.6
Marzluff, W.F.7
Sharpless, N.E.8
-
61
-
-
84863045982
-
Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types
-
J. Salzman, C. Gawad, P.L. Wang, N. Lacayo, and P.O. Brown Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types PLoS One 7 2012 e30733
-
(2012)
PLoS One
, vol.7
, pp. e30733
-
-
Salzman, J.1
Gawad, C.2
Wang, P.L.3
Lacayo, N.4
Brown, P.O.5
-
62
-
-
7844246533
-
The mouse formin (Fmn) gene: Abundant circular RNA transcripts and gene-targeted deletion analysis
-
C.W. Chao, D.C. Chan, A. Kuo, and P. Leder The mouse formin (Fmn) gene: abundant circular RNA transcripts and gene-targeted deletion analysis Mol. Med. 4 1998 614 628
-
(1998)
Mol. Med.
, vol.4
, pp. 614-628
-
-
Chao, C.W.1
Chan, D.C.2
Kuo, A.3
Leder, P.4
-
63
-
-
78650696753
-
Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk
-
C.E. Burd, W.R. Jeck, Y. Liu, H.K. Sanoff, Z. Wang, and N.E. Sharpless Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk PLoS Genet. 6 2010 e1001233
-
(2010)
PLoS Genet.
, vol.6
, pp. e1001233
-
-
Burd, C.E.1
Jeck, W.R.2
Liu, Y.3
Sanoff, H.K.4
Wang, Z.5
Sharpless, N.E.6
-
64
-
-
80455143733
-
MiRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA
-
T.B. Hansen, E.D. Wiklund, J.B. Bramsen, S.B. Villadsen, A.L. Statham, S.J. Clark, and J. Kjems miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA EMBO J. 30 2011 4414 4422
-
(2011)
EMBO J.
, vol.30
, pp. 4414-4422
-
-
Hansen, T.B.1
Wiklund, E.D.2
Bramsen, J.B.3
Villadsen, S.B.4
Statham, A.L.5
Clark, S.J.6
Kjems, J.7
-
65
-
-
84908093894
-
Short intronic repeat sequences facilitate circular RNA production
-
D. Liang, and J.E. Wilusz Short intronic repeat sequences facilitate circular RNA production Genes Dev. 28 2014 2233 2247
-
(2014)
Genes Dev.
, vol.28
, pp. 2233-2247
-
-
Liang, D.1
Wilusz, J.E.2
-
66
-
-
84907509527
-
Complementary sequence-mediated exon circularization
-
X.O. Zhang, H.B. Wang, Y. Zhang, X. Lu, L.L. Chen, and L. Yang Complementary sequence-mediated exon circularization Cell 159 2014 134 147
-
(2014)
Cell
, vol.159
, pp. 134-147
-
-
Zhang, X.O.1
Wang, H.B.2
Zhang, Y.3
Lu, X.4
Chen, L.L.5
Yang, L.6
-
67
-
-
84920917407
-
Analysis of intron sequences reveals Hallmarks of circular RNA biogenesis in animals
-
A. Ivanov, S. Memczak, E. Wyler, F. Torti, H.T. Porath, M.R. Orejuela, M. Piechotta, E.Y. Levanon, M. Landthaler, C. Dieterich, and et al. Analysis of intron sequences reveals Hallmarks of circular RNA biogenesis in animals Cell Rep. 10 2015 170 177
-
(2015)
Cell Rep.
, vol.10
, pp. 170-177
-
-
Ivanov, A.1
Memczak, S.2
Wyler, E.3
Torti, F.4
Porath, H.T.5
Orejuela, M.R.6
Piechotta, M.7
Levanon, E.Y.8
Landthaler, M.9
Dieterich, C.10
-
68
-
-
84911476411
-
CircRNA biogenesis competes with pre-mRNA splicing
-
R. Ashwal-Fluss, M. Meyer, N.R. Pamudurti, A. Ivanov, O. Bartok, M. Hanan, N. Evantal, S. Memczak, N. Rajewsky, and S. Kadener circRNA biogenesis competes with pre-mRNA splicing Mol. Cell 56 2014 55 66
-
(2014)
Mol. Cell
, vol.56
, pp. 55-66
-
-
Ashwal-Fluss, R.1
Meyer, M.2
Pamudurti, N.R.3
Ivanov, A.4
Bartok, O.5
Hanan, M.6
Evantal, N.7
Memczak, S.8
Rajewsky, N.9
Kadener, S.10
-
69
-
-
84939419124
-
Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed
-
A. Rybak-Wolf, C. Stottmeister, P. Glazar, M. Jens, N. Pino, S. Giusti, M. Hanan, M. Behm, O. Bartok, R. Ashwal-Fluss, and et al. Circular RNAs in the mammalian brain are highly abundant, conserved, and dynamically expressed Mol. Cell 58 2015 870 885
-
(2015)
Mol. Cell
, vol.58
, pp. 870-885
-
-
Rybak-Wolf, A.1
Stottmeister, C.2
Glazar, P.3
Jens, M.4
Pino, N.5
Giusti, S.6
Hanan, M.7
Behm, M.8
Bartok, O.9
Ashwal-Fluss, R.10
-
70
-
-
84925773568
-
Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity
-
X. You, I. Vlatkovic, A. Babic, T. Will, I. Epstein, G. Tushev, G. Akbalik, M. Wang, C. Glock, C. Quedenau, and et al. Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity Nat. Neurosci. 18 2015 603 610
-
(2015)
Nat. Neurosci.
, vol.18
, pp. 603-610
-
-
You, X.1
Vlatkovic, I.2
Babic, A.3
Will, T.4
Epstein, I.5
Tushev, G.6
Akbalik, G.7
Wang, M.8
Glock, C.9
Quedenau, C.10
|