-
1
-
-
42549129942
-
Genomic plasticity and the diversity of polyploidy plants
-
Leitch AR, Leitch IJ. Genomic plasticity and the diversity of polyploidy plants. Science. 2008;320:481-3.
-
(2008)
Science
, vol.320
, pp. 481-483
-
-
Leitch, A.R.1
Leitch, I.J.2
-
2
-
-
0000150298
-
Genomic analysis in Brassica with specific reference to the experimental formation of B. napus and peculiar mode of fertilization
-
U N. Genomic analysis in Brassica with specific reference to the experimental formation of B. napus and peculiar mode of fertilization. Jpn J Bot. 1935;7:389-452.
-
(1935)
Jpn J Bot
, vol.7
, pp. 389-452
-
-
-
3
-
-
17844379449
-
Chromosome triplication found across the tribe Brassiceae
-
Lysak MA, Koch MA, Pecinka A, Schubert I. Chromosome triplication found across the tribe Brassiceae. Genome Res. 2005;15:516-25.
-
(2005)
Genome Res
, vol.15
, pp. 516-525
-
-
Lysak, M.A.1
Koch, M.A.2
Pecinka, A.3
Schubert, I.4
-
4
-
-
0033804889
-
Comparative evolutionary analysis of chalcone synthase and alcohol dehydragenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)
-
Koch MA, Haubold B, Mitchell-Olds T. Comparative evolutionary analysis of chalcone synthase and alcohol dehydragenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae). Mol Biol Evol. 2000;17:1483-98.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1483-1498
-
-
Koch, M.A.1
Haubold, B.2
Mitchell-Olds, T.3
-
5
-
-
84898052115
-
Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids
-
Woodhouse MR, Cheng F, Pires JC, Lisch D, Freeling M, Wang XW. Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids. Proc Natl Acad Sci U S A. 2014;111(1):5283-8.
-
(2014)
Proc Natl Acad Sci U S A
, vol.111
, Issue.1
, pp. 5283-5288
-
-
Woodhouse, M.R.1
Cheng, F.2
Pires, J.C.3
Lisch, D.4
Freeling, M.5
Wang, X.W.6
-
6
-
-
69949128558
-
Comparative analysis between homologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence
-
Cheung F, Trick M, Drou N, Lim YP, Park JY, Kwon SJ, et al. Comparative analysis between homologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence. Plant Cell. 2009;21:1912-28.
-
(2009)
Plant Cell
, vol.21
, pp. 1912-1928
-
-
Cheung, F.1
Trick, M.2
Drou, N.3
Lim, Y.P.4
Park, J.Y.5
Kwon, S.J.6
-
7
-
-
4344569710
-
The contribution of polyploidy to variation in Brassica species
-
Osborn TC. The contribution of polyploidy to variation in Brassica species. Physiol Plant. 2004;121:531-6.
-
(2004)
Physiol Plant
, vol.121
, pp. 531-536
-
-
Osborn, T.C.1
-
8
-
-
15544389841
-
Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution
-
He X, Zhang J. Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. Genetics. 2005;169:1157-64.
-
(2005)
Genetics
, vol.169
, pp. 1157-1164
-
-
He, X.1
Zhang, J.2
-
9
-
-
10344248200
-
Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives
-
Rana D, van den Boogaart T, O'Neill CM, Hynes L, Bent E, Macpherson L, et al. Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives. Plant J. 2004;40:725-33.
-
(2004)
Plant J
, vol.40
, pp. 725-733
-
-
Rana, D.1
Boogaart, T.2
O'Neill, C.M.3
Hynes, L.4
Bent, E.5
Macpherson, L.6
-
10
-
-
33745467604
-
Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveals gene loss, fragmentation and dispersal following polyploidy
-
Town CD, Cheung F, Maiti R, Crabtree J, Haas BJ, Wortman JR, et al. Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveals gene loss, fragmentation and dispersal following polyploidy. Plant Cell. 2006;18:1348-59.
-
(2006)
Plant Cell
, vol.18
, pp. 1348-1359
-
-
Town, C.D.1
Cheung, F.2
Maiti, R.3
Crabtree, J.4
Haas, B.J.5
Wortman, J.R.6
-
11
-
-
33745487720
-
Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa
-
Yang TJ, Kim JS, Kwon SJ, Lim KB, Choi BS, Kim JA, et al. Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa. Plant Cell. 2006;18:1339-47.
-
(2006)
Plant Cell
, vol.18
, pp. 1339-1347
-
-
Yang, T.J.1
Kim, J.S.2
Kwon, S.J.3
Lim, K.B.4
Choi, B.S.5
Kim, J.A.6
-
12
-
-
80053386792
-
The genome of mesopolyploid crop species Brassica rapa
-
Wang XW, Wang HZ, Wang J, Sun RF, Wu J, Liu SY, et al. The genome of mesopolyploid crop species Brassica rapa. Nat Genet. 2011;43:1035-9.
-
(2011)
Nat Genet
, vol.43
, pp. 1035-1039
-
-
Wang, X.W.1
Wang, H.Z.2
Wang, J.3
Sun, R.F.4
Wu, J.5
Liu, S.Y.6
-
13
-
-
31544442199
-
Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana
-
Parkin IAP, Gulden SM, Sharpe AG, Lukens L, Trick M, Osborn TC, et al. Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana. Genetics. 2005;171:765-81.
-
(2005)
Genetics
, vol.171
, pp. 765-781
-
-
Parkin, I.A.P.1
Gulden, S.M.2
Sharpe, A.G.3
Lukens, L.4
Trick, M.5
Osborn, T.C.6
-
14
-
-
34648835383
-
Mapping of yield influencing QTL in Brassica juncea: implications for breeding of a major oilseed crop of dryland areas
-
Ramchiary N, Padmaja KL, Sharma S, Gupta V, Sodhi YS, Mukhopadhyay A, et al. Mapping of yield influencing QTL in Brassica juncea: implications for breeding of a major oilseed crop of dryland areas. Theor Appl Genet. 2007;115:807-17.
-
(2007)
Theor Appl Genet
, vol.115
, pp. 807-817
-
-
Ramchiary, N.1
Padmaja, K.L.2
Sharma, S.3
Gupta, V.4
Sodhi, Y.S.5
Mukhopadhyay, A.6
-
15
-
-
41549133928
-
Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes
-
Panjabi P, Jagannath A, Bisht NC, Padmaja KL, Sharma S, Gupta V, et al. Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. BMC Genomics. 2008;9:113-31.
-
(2008)
BMC Genomics
, vol.9
, pp. 113-131
-
-
Panjabi, P.1
Jagannath, A.2
Bisht, N.C.3
Padmaja, K.L.4
Sharma, S.5
Gupta, V.6
-
16
-
-
79951721031
-
Integration of linkage maps for the amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa
-
Wang J, Lydiate DJ, Parkin IAP, Falentin C, Delourme R, Carion PWC, et al. Integration of linkage maps for the amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa. BMC Genomics. 2011;12:101-20.
-
(2011)
BMC Genomics
, vol.12
, pp. 101-120
-
-
Wang, J.1
Lydiate, D.J.2
Parkin, I.A.P.3
Falentin, C.4
Delourme, R.5
Carion, P.W.C.6
-
17
-
-
77950950181
-
The first meiosis of resynthesized Brassica napus, a genome blender
-
Szadkowski E, Eber F, Huteau V, Lode M, Huneau C, Belcram H, et al. The first meiosis of resynthesized Brassica napus, a genome blender. New Phytol. 2010;186:102-12.
-
(2010)
New Phytol
, vol.186
, pp. 102-112
-
-
Szadkowski, E.1
Eber, F.2
Huteau, V.3
Lode, M.4
Huneau, C.5
Belcram, H.6
-
18
-
-
77950955273
-
Homoeologous recombination in allopolyploids: the polyploidy ratchet
-
Gaeta RT, Pires JC. Homoeologous recombination in allopolyploids: the polyploidy ratchet. New Phytol. 2010;186:18-28.
-
(2010)
New Phytol
, vol.186
, pp. 18-28
-
-
Gaeta, R.T.1
Pires, J.C.2
-
19
-
-
66149142707
-
A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences
-
Trick M, Cheung F, Drou N, Fraser F, Lobenhofer EK, Hurban P, et al. A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences. BMC Plant Biol. 2009;9:50-9.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 50-59
-
-
Trick, M.1
Cheung, F.2
Drou, N.3
Fraser, F.4
Lobenhofer, E.K.5
Hurban, P.6
-
20
-
-
84871906959
-
Accessing complex crop genomics with next-generation sequencing
-
Edwards D, Batley J, Snowdon RJ. Accessing complex crop genomics with next-generation sequencing. Theor Appl Genet. 2013;126:1-11.
-
(2013)
Theor Appl Genet
, vol.126
, pp. 1-11
-
-
Edwards, D.1
Batley, J.2
Snowdon, R.J.3
-
21
-
-
74549221016
-
Genome sequence of the palaeopolyploid soybean
-
Schmutz J, Cannon SB, Schlueter J, Ma JX, Mitros T, Nelson W, et al. Genome sequence of the palaeopolyploid soybean. Nature. 2010;463:178-83.
-
(2010)
Nature
, vol.463
, pp. 178-183
-
-
Schmutz, J.1
Cannon, S.B.2
Schlueter, J.3
Ma, J.X.4
Mitros, T.5
Nelson, W.6
-
22
-
-
79960422847
-
Genome sequence and analysis of the tuber crop potato
-
The Potato Genome Sequencing Consortium. Genome sequence and analysis of the tuber crop potato. Nature. 2011;475:189-95.
-
(2011)
Nature
, vol.475
, pp. 189-195
-
-
-
23
-
-
84863693752
-
The tomato genome sequence provides insights into fleshy fruit evolution
-
The Tomato Genome Sequencing Consortium. The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 2012;485:635-41.
-
(2012)
Nature
, vol.485
, pp. 635-641
-
-
-
24
-
-
84866941666
-
The draft genome of a diploid cotton Gossypium raimondii
-
Wang KB, Wang ZW, Li FG, Ye WW, Wang JY, Song GL, et al. The draft genome of a diploid cotton Gossypium raimondii. Nat Genet. 2012;44:1098-103.
-
(2012)
Nat Genet
, vol.44
, pp. 1098-1103
-
-
Wang, K.B.1
Wang, Z.W.2
Li, F.G.3
Ye, W.W.4
Wang, J.Y.5
Song, G.L.6
-
25
-
-
84888003794
-
Transcriptome profile analysis of maize seedling in response to high-salinity, drought and cold stresses by deep sequencing
-
Shan X, Li Y, Jiang Y, Jiang Z, Hao W, Yuan Y. Transcriptome profile analysis of maize seedling in response to high-salinity, drought and cold stresses by deep sequencing. Plant Mol Biol Rep. 2013;31:1485-91.
-
(2013)
Plant Mol Biol Rep
, vol.31
, pp. 1485-1491
-
-
Shan, X.1
Li, Y.2
Jiang, Y.3
Jiang, Z.4
Hao, W.5
Yuan, Y.6
-
26
-
-
84894058331
-
Differentially expressed genes during flowering and grain filling common bean (Phaseolus vulgaris) grown under drought stress conditions
-
Mueller BSF, Sakamoto T, Silverira RDD, Zambussi-Carvalho PF, Pereira M, Pappas Jr GJ, et al. Differentially expressed genes during flowering and grain filling common bean (Phaseolus vulgaris) grown under drought stress conditions. Plant Mol Biol Rep. 2014;32:438-51.
-
(2014)
Plant Mol Biol Rep
, vol.32
, pp. 438-451
-
-
Mueller, B.S.F.1
Sakamoto, T.2
Silverira, R.D.D.3
Zambussi-Carvalho, P.F.4
Pereira, M.5
Pappas, G.J.6
-
27
-
-
64749090107
-
Single nucleotide polymorphysn (SNP) discovery in the polyploidy Brassica napus using Solexa transcriptome sequencing
-
Trick M, Long Y, Meng JL, Bancroft I. Single nucleotide polymorphysn (SNP) discovery in the polyploidy Brassica napus using Solexa transcriptome sequencing. Plant Biotechnol J. 2009;7:334-46.
-
(2009)
Plant Biotechnol J
, vol.7
, pp. 334-346
-
-
Trick, M.1
Long, Y.2
Meng, J.L.3
Bancroft, I.4
-
28
-
-
79961199174
-
Dissecting the genome of the polyploidy crop oilseed rapa by transcriptome sequencing
-
Bancroft I, Morgan C, Fraser F, Higgins J, Wells R, Clissold L, et al. Dissecting the genome of the polyploidy crop oilseed rapa by transcriptome sequencing. Nat Biotechnol. 2011;29:762-6.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 762-766
-
-
Bancroft, I.1
Morgan, C.2
Fraser, F.3
Higgins, J.4
Wells, R.5
Clissold, L.6
-
29
-
-
84862231139
-
Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genome of the polyploidy crop species Brassica napus
-
Higgins J, Magusin A, Trick M, Fraser F, Bancroft I. Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genome of the polyploidy crop species Brassica napus. BMC Genomics. 2012;13:247-60.
-
(2012)
BMC Genomics
, vol.13
, pp. 247-260
-
-
Higgins, J.1
Magusin, A.2
Trick, M.3
Fraser, F.4
Bancroft, I.5
-
30
-
-
84910127238
-
trieFinder: an efficient program for annotating digital gene expression (DGE) tags
-
Renaud G, LaFave MC, Liang J, Wolfsberg TG, Burgess SM. trieFinder: an efficient program for annotating digital gene expression (DGE) tags. BMC Bioinformatics. 2014;15:329-35.
-
(2014)
BMC Bioinformatics
, vol.15
, pp. 329-335
-
-
Renaud, G.1
LaFave, M.C.2
Liang, J.3
Wolfsberg, T.G.4
Burgess, S.M.5
-
31
-
-
62849120346
-
Analysis of gene expression in resynthesized Brassica napus allopolyploids using Arabidopsis 70mer oligo microarrays
-
Gaeta RT, Yoo SY, Pires JC, Doerge RW, Chen ZJ, Osborn TC. Analysis of gene expression in resynthesized Brassica napus allopolyploids using Arabidopsis 70mer oligo microarrays. Plos One. 2009;4(3):e4760.
-
(2009)
Plos One
, vol.4
, Issue.3
, pp. e4760
-
-
Gaeta, R.T.1
Yoo, S.Y.2
Pires, J.C.3
Doerge, R.W.4
Chen, Z.J.5
Osborn, T.C.6
-
32
-
-
84873027229
-
Use of digital gene expression to discriminate gene expression differences in early generations of resynthesized Brassica napus and its diploid progenitors
-
Jiang JJ, Shao YL, Du K, Ran LP, Fang XP, Wang YP. Use of digital gene expression to discriminate gene expression differences in early generations of resynthesized Brassica napus and its diploid progenitors. BMC Genomics. 2013;14:72-82.
-
(2013)
BMC Genomics
, vol.14
, pp. 72-82
-
-
Jiang, J.J.1
Shao, Y.L.2
Du, K.3
Ran, L.P.4
Fang, X.P.5
Wang, Y.P.6
-
33
-
-
84880079947
-
Tracing the transcriptome changes in synthetic trigenomic allohexaploids of Brassica using an RNA-seq approach
-
Zhao Q, Zou J, Meng JL, Mei SY, Wang JB. Tracing the transcriptome changes in synthetic trigenomic allohexaploids of Brassica using an RNA-seq approach. Plos One. 2013;8(7):e68883.
-
(2013)
Plos One
, vol.8
, Issue.7
, pp. e68883
-
-
Zhao, Q.1
Zou, J.2
Meng, J.L.3
Mei, S.Y.4
Wang, J.B.5
-
34
-
-
57149085481
-
Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms
-
Hoen PAC, Ariyurek Y, Thygesen HH, Vreugdenhil E, Vossen RHAM, Menezes RX, et al. Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. Nucl Acids Res. 2008;36:141-51.
-
(2008)
Nucl Acids Res
, vol.36
, pp. 141-151
-
-
Hoen, P.A.C.1
Ariyurek, Y.2
Thygesen, H.H.3
Vreugdenhil, E.4
Vossen, R.H.A.M.5
Menezes, R.X.6
-
35
-
-
79955663779
-
Nutritional and nutraceutical potential of rape (Brassica napus L. var. napus) and 'tronchuda' cabbage (Brassica oleracea L. var. costata) inflorescences
-
Batista C, Barro L, Carvalho AM, Ferreira I. Nutritional and nutraceutical potential of rape (Brassica napus L. var. napus) and 'tronchuda' cabbage (Brassica oleracea L. var. costata) inflorescences. Food Chem Toxicol. 2011;49:1208-14.
-
(2011)
Food Chem Toxicol
, vol.49
, pp. 1208-1214
-
-
Batista, C.1
Barro, L.2
Carvalho, A.M.3
Ferreira, I.4
-
36
-
-
84884310564
-
Coordinate changes in gene expression and triacylglycerol composition in the developing seeds of oilseed rape (Brassica napus) and turnip rape (Brassica rapa)
-
Vuorinen AL, Kalpio M, Linderborg KM, Kortesniemi M, Lehto K, Niemi J, et al. Coordinate changes in gene expression and triacylglycerol composition in the developing seeds of oilseed rape (Brassica napus) and turnip rape (Brassica rapa). Food Chem. 2014;145:664-73.
-
(2014)
Food Chem
, vol.145
, pp. 664-673
-
-
Vuorinen, A.L.1
Kalpio, M.2
Linderborg, K.M.3
Kortesniemi, M.4
Lehto, K.5
Niemi, J.6
-
37
-
-
34249337761
-
Perceptions of epigenetics
-
Bird A. Perceptions of epigenetics. Nature. 2007;447:396-8.
-
(2007)
Nature
, vol.447
, pp. 396-398
-
-
Bird, A.1
-
38
-
-
62349111195
-
Epigenetic regulation of stress responses in plants
-
Chinnusamy V, Zhu JK. Epigenetic regulation of stress responses in plants. Curr Opin Plant Biol. 2009;12(2):133-9.
-
(2009)
Curr Opin Plant Biol
, vol.12
, Issue.2
, pp. 133-139
-
-
Chinnusamy, V.1
Zhu, J.K.2
-
39
-
-
84868010349
-
Revisiting global gene expression analysis
-
Loven J, Orlando DA, Sigova AA, Lin CY, Rahi PB, Burge CB, et al. Revisiting global gene expression analysis. Cell. 2012;151(3):476-82.
-
(2012)
Cell
, vol.151
, Issue.3
, pp. 476-482
-
-
Loven, J.1
Orlando, D.A.2
Sigova, A.A.3
Lin, C.Y.4
Rahi, P.B.5
Burge, C.B.6
-
40
-
-
77958503285
-
Quantifying whole transcriptome size, a prerequisite for understanding transcriptome evolution across species: an example from a plant allopolyploid
-
Coate JE, Doyle JJ. Quantifying whole transcriptome size, a prerequisite for understanding transcriptome evolution across species: an example from a plant allopolyploid. Genome Biol Evol. 2010;2:534-46.
-
(2010)
Genome Biol Evol
, vol.2
, pp. 534-546
-
-
Coate, J.E.1
Doyle, J.J.2
-
41
-
-
84925488890
-
Variation in transcriptome size: are we getting the message?
-
Coate JE, Doyle JJ. Variation in transcriptome size: are we getting the message? Chromosoma. 2014; DOI 10.1007/s00412-014-0496-3.
-
(2014)
Chromosoma.
-
-
Coate, J.E.1
Doyle, J.J.2
-
42
-
-
84858609372
-
A comprehensive transcriptome study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species
-
Ilut DC, Coate JE, Luciano AK, Owens TG, May GD, Farmer A, et al. A comprehensive transcriptome study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species. Am J Bot. 2012;99(2):383-96.
-
(2012)
Am J Bot
, vol.99
, Issue.2
, pp. 383-396
-
-
Ilut, D.C.1
Coate, J.E.2
Luciano, A.K.3
Owens, T.G.4
May, G.D.5
Farmer, A.6
-
43
-
-
77951171017
-
Genomic and expression plasticity of polyploidy
-
Jackson S, Chen ZJ. Genomic and expression plasticity of polyploidy. Curr Opin Plant Biol. 2010;13:153-9.
-
(2010)
Curr Opin Plant Biol
, vol.13
, pp. 153-159
-
-
Jackson, S.1
Chen, Z.J.2
-
44
-
-
33751014556
-
The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes
-
Schranz ME, Lysak MA, Mitchell-Olds T. The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. Trends Plant Sci. 2006;11:535-42.
-
(2006)
Trends Plant Sci
, vol.11
, pp. 535-542
-
-
Schranz, M.E.1
Lysak, M.A.2
Mitchell-Olds, T.3
-
45
-
-
59449095429
-
Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids
-
Xu YH, Zhong L, Wu XM, Fang XP, Wang JB. Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids. Planta. 2009;229:471-83.
-
(2009)
Planta
, vol.229
, pp. 471-483
-
-
Xu, Y.H.1
Zhong, L.2
Wu, X.M.3
Fang, X.P.4
Wang, J.B.5
-
46
-
-
79960558983
-
Polyploid formation pathways have an impact on genetic rearrangement in resynthesized Brassica napus
-
Szadkowski E, Eber F, Huteau V, Lode M, Coriton O, Jenczewski E, et al. Polyploid formation pathways have an impact on genetic rearrangement in resynthesized Brassica napus. New Phytol. 2011;191:884-94.
-
(2011)
New Phytol
, vol.191
, pp. 884-894
-
-
Szadkowski, E.1
Eber, F.2
Huteau, V.3
Lode, M.4
Coriton, O.5
Jenczewski, E.6
-
47
-
-
0345071423
-
Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing
-
Adams KLR, Gronn R, Percifield R, Wendel JF. Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing. Proc Natl Acad Sci U S A. 2003;100:4649-54.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 4649-4654
-
-
Adams, K.L.R.1
Gronn, R.2
Percifield, R.3
Wendel, J.F.4
-
48
-
-
77956903986
-
Genome structure affects the rate of autosyndesis and allosyndesis in AABC, BBAC, CCAB Brassica interspecific hybrids
-
Mason AS, Huteau V, Eber F, Coriton O, Yan GJ, Nelson MN, et al. Genome structure affects the rate of autosyndesis and allosyndesis in AABC, BBAC, CCAB Brassica interspecific hybrids. Chromosome Res. 2010;18:655-66.
-
(2010)
Chromosome Res
, vol.18
, pp. 655-666
-
-
Mason, A.S.1
Huteau, V.2
Eber, F.3
Coriton, O.4
Yan, G.J.5
Nelson, M.N.6
-
49
-
-
33644762929
-
Genome wide non-additive gene regulation in Arabidopsis allotetraploids
-
Wang JL, Tian L, Lee HS, Wei NE, Jiang HM, Watson B, et al. Genome wide non-additive gene regulation in Arabidopsis allotetraploids. Genetics. 2006;172:507-17.
-
(2006)
Genetics
, vol.172
, pp. 507-517
-
-
Wang, J.L.1
Tian, L.2
Lee, H.S.3
Wei, N.E.4
Jiang, H.M.5
Watson, B.6
-
50
-
-
37849034684
-
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype
-
Gaeta RT, Pires JC, Iniguez-Luy F, Leon E, Osborn TC. Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype. Plant Cell. 2007;19:3403-17.
-
(2007)
Plant Cell
, vol.19
, pp. 3403-3417
-
-
Gaeta, R.T.1
Pires, J.C.2
Iniguez-Luy, F.3
Leon, E.4
Osborn, T.C.5
-
51
-
-
33645832572
-
Patterns of sequence loss and cytosine methylation within a population of newly synthesized Brassica napus allopolyploids
-
Lukens LN, Pires JC, Leon E, Vogelzang R, Oslach L, Osborn T. Patterns of sequence loss and cytosine methylation within a population of newly synthesized Brassica napus allopolyploids. Plant Physiol. 2006;140:336-48.
-
(2006)
Plant Physiol
, vol.140
, pp. 336-348
-
-
Lukens, L.N.1
Pires, J.C.2
Leon, E.3
Vogelzang, R.4
Oslach, L.5
Osborn, T.6
-
52
-
-
33750046897
-
Plastid genome characterization in Brassica and Brassicaceae using a new set of nine SSR
-
Flannery ML, Mitchell FJG, Coyne S, Kavanagh TA, Burke JI, Salamin N, et al. Plastid genome characterization in Brassica and Brassicaceae using a new set of nine SSR. Theor Appl Genet. 2006;113:1221-31.
-
(2006)
Theor Appl Genet
, vol.113
, pp. 1221-1231
-
-
Flannery, M.L.1
Mitchell, F.J.G.2
Coyne, S.3
Kavanagh, T.A.4
Burke, J.I.5
Salamin, N.6
-
53
-
-
80255129323
-
Proteomic changes in newly synthesized Brassica napus allotetraploids and their early generations
-
Kong F, Mao SJ, Jiang JJ, Wang J, Fang XP, Wang YP. Proteomic changes in newly synthesized Brassica napus allotetraploids and their early generations. Plant Mol Biol Rep. 2011;29:927-35.
-
(2011)
Plant Mol Biol Rep
, vol.29
, pp. 927-935
-
-
Kong, F.1
Mao, S.J.2
Jiang, J.J.3
Wang, J.4
Fang, X.P.5
Wang, Y.P.6
-
54
-
-
67650711615
-
SOAP2: an improved ultrafast tool for short read alignment
-
Li RQ, Yu C, Li YR, Lam TW, Yiu SM, Kristiansen K, et al. SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics. 2009;25:1966-7.
-
(2009)
Bioinformatics
, vol.25
, pp. 1966-1967
-
-
Li, R.Q.1
Yu, C.2
Li, Y.R.3
Lam, T.W.4
Yiu, S.M.5
Kristiansen, K.6
-
55
-
-
70349636603
-
Next-generation tag sequencing for cancer gene expression profiling
-
Morrissy AS, Morin RD, Delaney A, Zeng T, McDonald H, Jones S, et al. Next-generation tag sequencing for cancer gene expression profiling. Genome Res. 2009;19:1825-35.
-
(2009)
Genome Res
, vol.19
, pp. 1825-1835
-
-
Morrissy, A.S.1
Morin, R.D.2
Delaney, A.3
Zeng, T.4
McDonald, H.5
Jones, S.6
-
56
-
-
0030681260
-
The significance of digital gene expression profiles
-
Audic S, Claverie JM. The significance of digital gene expression profiles. Genome Res. 1997;7:986-95.
-
(1997)
Genome Res
, vol.7
, pp. 986-995
-
-
Audic, S.1
Claverie, J.M.2
-
57
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
Benjamini BY, Yekutieli D. The control of the false discovery rate in multiple testing under dependency. Ann Stat. 2011;29:1165-88.
-
(2011)
Ann Stat
, vol.29
, pp. 1165-1188
-
-
Benjamini, B.Y.1
Yekutieli, D.2
-
58
-
-
24644503098
-
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Gotz S, Garcia-Gomez JM, Terol J, Talon M, Robles M. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics. 2005;21:3674-6.
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Gotz, S.2
Garcia-Gomez, J.M.3
Terol, J.4
Talon, M.5
Robles, M.6
-
59
-
-
33747846582
-
WEGO: a web tool for plotting GO annotations
-
Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, et al. WEGO: a web tool for plotting GO annotations. Nucl Acids Res. 2006;34:293-7.
-
(2006)
Nucl Acids Res
, vol.34
, pp. 293-297
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
Zhang, Z.6
-
61
-
-
9444225935
-
Java tree view-extensible visualization of microarray data
-
Saldanha AJ. Java tree view-extensible visualization of microarray data. Bioinformatics. 2004;20:3246-8.
-
(2004)
Bioinformatics
, vol.20
, pp. 3246-3248
-
-
Saldanha, A.J.1
|