Genome mining and metabolic profiling of the rhizosphere bacterium Pseudomonas sp. SH-C52 for antimicrobial compounds

Frontiers in Microbiology

Volumn 6, Issue JUL, 2015, Pages

  Van Der Voort, Menno ^a   Meijer, Harold J G ^a   Schmidt, Yvonne ^b   Watrous, Jeramie ^c   Dekkers, Ester ^a   Mendes, Rodrigo ^a,d   Dorrestein, Pieter C ^c   Gross, Harald ^e   Raaijmakers, Jos M ^a,f  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b UNIVERSITY OF BONN   (Germany)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d EMBRAPA CERRADOS   (Brazil)

^e UNIVERSITY OF TÜBINGEN   (Germany)

^f NETHERLANDS INSTITUTE OF ECOLOGY NIOO KNAW   (Netherlands)

Author keywords

Antimicrobial peptides; Beneficial microbes; Biocontrol; Genome sequencing; Mass spectrometry; Pseudomonads; Rhizosphere bacteria

Indexed keywords

ANTIINFECTIVE AGENT; BRABANTAMIDE A; LIPOPEPTIDE; NONRIBOSOMAL PEPTIDE SYNTHETASE; THANAMYCIN; THANAPEPTIN; UNCLASSIFIED DRUG;

ANTIMICROBIAL ACTIVITY; ARTICLE; BACTERIAL METABOLISM; COMPUTER MODEL; DATA MINING; GENE SEQUENCE; GENOME ANALYSIS; MASS SPECTROMETRY; METABOLITE; NONHUMAN; ORGANISMAL INTERACTION; PHYLOGENY; PHYTOPHTHORA; PSEUDOMONAS; RHIZOSPHERE BACTERIUM;

BACTERIA (MICROORGANISMS); BETA VULGARIS SUBSP. VULGARIS; FUNGI; PHYTOPHTHORA INFESTANS; PSEUDOMONAS CORRUGATA; PSEUDOMONAS SP.; THANATEPHORUS CUCUMERIS;

EID: 84938858017     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2015.00693     Document Type: Article

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