메뉴 건너뛰기




Volumn 12, Issue 4, 2010, Pages 899-915

Inactivation of the GacA response regulator in Pseudomonas fluorescens Pf-5 has far-reaching transcriptomic consequences

Author keywords

[No Author keywords available]

Indexed keywords

PSEUDOMONAS; PSEUDOMONAS FLUORESCENS; PSEUDOMONAS FLUORESCENS PF-5;

EID: 77954629851     PISSN: 14622912     EISSN: 14622920     Source Type: Journal    
DOI: 10.1111/j.1462-2920.2009.02134.x     Document Type: Article
Times cited : (127)

References (87)
  • 2
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • Altman RB, Brutlag DL, Karp PD, Lathrop RH, Searls DB., Menlo Park, CA, USA, AAAI Press
    • Bailey TL, Elkan C. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. The Second International Conference on Intelligent Systems for Molecular Biology 1994, 28-36. Altman RB, Brutlag DLKarp PDLathrop RHSearls DB., Menlo Park, CA, USA, AAAI Press, pp.
    • (1994) The Second International Conference on Intelligent Systems for Molecular Biology , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2
  • 3
    • 0031877016 scopus 로고    scopus 로고
    • Combining evidence using p-values: application to sequence homology searches
    • Bailey TL, Gribskov M. Combining evidence using p-values: application to sequence homology searches. Bioinformatics 1998, 14:48-54.
    • (1998) Bioinformatics , vol.14 , pp. 48-54
    • Bailey, T.L.1    Gribskov, M.2
  • 5
    • 0033764654 scopus 로고    scopus 로고
    • Iron regulation of the hcnABC genes encoding hydrogen cyanide synthase depends on the anaerobic regulator ANR rather than on the global activator GacA in Pseudomonas fluorescens CHA0
    • Blumer C, Haas D. Iron regulation of the hcnABC genes encoding hydrogen cyanide synthase depends on the anaerobic regulator ANR rather than on the global activator GacA in Pseudomonas fluorescens CHA0. Microbiology-Sgm 2000, 146:2417-2424.
    • (2000) Microbiology-Sgm , vol.146 , pp. 2417-2424
    • Blumer, C.1    Haas, D.2
  • 6
    • 0033598832 scopus 로고    scopus 로고
    • Global GacA-steered control of cyanide and exoprotease production in Pseudomonas fluorescens involves specific ribosome binding sites
    • Blumer C, Heeb S, Pessi G, Haas D. Global GacA-steered control of cyanide and exoprotease production in Pseudomonas fluorescens involves specific ribosome binding sites. Proc Natl Acad Sci USA 1999, 96:14073-14078.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 14073-14078
    • Blumer, C.1    Heeb, S.2    Pessi, G.3    Haas, D.4
  • 7
    • 18344396568 scopus 로고    scopus 로고
    • Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
    • Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C. Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nat Genet 2001, 29:365-371.
    • (2001) Nat Genet , vol.29 , pp. 365-371
    • Brazma, A.1    Hingamp, P.2    Quackenbush, J.3    Sherlock, G.4    Spellman, P.5    Stoeckert, C.6
  • 8
    • 65349160904 scopus 로고    scopus 로고
    • Determination of the regulon and identification of novel mRNA targets of Pseudomonas aeruginosa RsmA
    • Brencic A, Lory S. Determination of the regulon and identification of novel mRNA targets of Pseudomonas aeruginosa RsmA. Mol Microbiol 2009, 72:612-632.
    • (2009) Mol Microbiol , vol.72 , pp. 612-632
    • Brencic, A.1    Lory, S.2
  • 9
    • 67651219385 scopus 로고    scopus 로고
    • The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs
    • Brencic A, McFarland KA, McManus HR, Castang S, Mogno I, Dove SL, Lory S. The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs. Mol Microbiol 2009, 73:434-445.
    • (2009) Mol Microbiol , vol.73 , pp. 434-445
    • Brencic, A.1    McFarland, K.A.2    McManus, H.R.3    Castang, S.4    Mogno, I.5    Dove, S.L.6    Lory, S.7
  • 10
    • 34547471696 scopus 로고    scopus 로고
    • A cryptic PKS-NRPS gene locus in the plant commensal Pseudomonas fluorescens Pf-5 codes for the biosynthesis of an antimitotic rhizoxin complex
    • Brendel N, Partida-Martinez LP, Scherlach K, Hertweck C. A cryptic PKS-NRPS gene locus in the plant commensal Pseudomonas fluorescens Pf-5 codes for the biosynthesis of an antimitotic rhizoxin complex. Org Biomol Chem 2007, 5:2211-2213.
    • (2007) Org Biomol Chem , vol.5 , pp. 2211-2213
    • Brendel, N.1    Partida-Martinez, L.P.2    Scherlach, K.3    Hertweck, C.4
  • 12
    • 63049100914 scopus 로고    scopus 로고
    • Regulation of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens by the ClpP protease
    • de Bruijn I, Raaijmakers JM. Regulation of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens by the ClpP protease. J Bacteriol 2009, 191:1910-1923.
    • (2009) J Bacteriol , vol.191 , pp. 1910-1923
    • de Bruijn, I.1    Raaijmakers, J.M.2
  • 13
    • 32244434929 scopus 로고    scopus 로고
    • Influence of the regulatory protein RsmA on cellular functions in Pseudomonas aeruginosa PAO1, as revealed by transcriptome analysis
    • Burrowes E, Baysse C, Adams C, O'Gara F. Influence of the regulatory protein RsmA on cellular functions in Pseudomonas aeruginosa PAO1, as revealed by transcriptome analysis. Microbiology 2006, 152:405-418.
    • (2006) Microbiology , vol.152 , pp. 405-418
    • Burrowes, E.1    Baysse, C.2    Adams, C.3    O'Gara, F.4
  • 14
    • 25444502996 scopus 로고    scopus 로고
    • Microarray analysis of Pseudomonas aeruginosa reveals induction of pyocin genes in response to hydrogen peroxide
    • Chang W, Small DA, Toghrol F, Bentley WE. Microarray analysis of Pseudomonas aeruginosa reveals induction of pyocin genes in response to hydrogen peroxide. BMC Genomics 2005, 6:115.
    • (2005) BMC Genomics , vol.6 , pp. 115
    • Chang, W.1    Small, D.A.2    Toghrol, F.3    Bentley, W.E.4
  • 15
    • 23044461889 scopus 로고    scopus 로고
    • An improved method for rapid generation of unmarked Pseudomonas aeruginosa deletion mutants
    • Choi KH, Schweizer HP. An improved method for rapid generation of unmarked Pseudomonas aeruginosa deletion mutants. BMC Microbiol 2005, 5:30.
    • (2005) BMC Microbiol , vol.5 , pp. 30
    • Choi, K.H.1    Schweizer, H.P.2
  • 16
    • 77954848618 scopus 로고    scopus 로고
    • A two-component regulatory system controlling antibiotic production by Pseudomonas fluorescens Pf-5
    • PhD Dissertation. Corvallis, OR, USA: Oregon State University
    • Corbell NA. A two-component regulatory system controlling antibiotic production by Pseudomonas fluorescens Pf-5. 1999, PhD Dissertation. Corvallis, OR, USA: Oregon State University
    • (1999)
    • Corbell, N.A.1
  • 17
    • 0028826419 scopus 로고
    • A global regulator of secondary metabolite production in Pseudomonas fluorescens Pf-5
    • Corbell N, Loper JE. A global regulator of secondary metabolite production in Pseudomonas fluorescens Pf-5. J Bacteriol 1995, 177:6230-6236.
    • (1995) J Bacteriol , vol.177 , pp. 6230-6236
    • Corbell, N.1    Loper, J.E.2
  • 18
    • 59549100941 scopus 로고    scopus 로고
    • Iron uptake regulation in Pseudomonas aeruginosa
    • Cornelis P, Matthijs S, Van Oeffelen L. Iron uptake regulation in Pseudomonas aeruginosa. BioMetals 2009, 22:15-22.
    • (2009) BioMetals , vol.22 , pp. 15-22
    • Cornelis, P.1    Matthijs, S.2    Van Oeffelen, L.3
  • 19
    • 0029015364 scopus 로고
    • Cloning and characterization of pvdS, a gene required for pyoverdine synthesis in Pseudomonas aeruginosa: PvdS is probably an alternative sigma factor
    • Cunliffe HE, Merriman TR, Lamont IL. Cloning and characterization of pvdS, a gene required for pyoverdine synthesis in Pseudomonas aeruginosa: PvdS is probably an alternative sigma factor. J Bacteriol 1995, 177:2744-2750.
    • (1995) J Bacteriol , vol.177 , pp. 2744-2750
    • Cunliffe, H.E.1    Merriman, T.R.2    Lamont, I.L.3
  • 20
    • 0033860822 scopus 로고    scopus 로고
    • Controlling instability in gacS-gacA regulatory genes during inoculant production of Pseudomonas fluorescens biocontrol strains
    • Duffy BK, Defago G. Controlling instability in gacS-gacA regulatory genes during inoculant production of Pseudomonas fluorescens biocontrol strains. Appl Environ Microbiol 2000, 66:3142-3150.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3142-3150
    • Duffy, B.K.1    Defago, G.2
  • 21
    • 0028467190 scopus 로고
    • Global regulation of expression of antifungal factors by a Pseudomonas fluorescens biological control strain
    • Gaffney TD, Lam ST, Ligon J, Gates K, Frazelle A, Di Maio J. Global regulation of expression of antifungal factors by a Pseudomonas fluorescens biological control strain. Mol Plant Microbe Interact 1994, 7:455-463.
    • (1994) Mol Plant Microbe Interact , vol.7 , pp. 455-463
    • Gaffney, T.D.1    Lam, S.T.2    Ligon, J.3    Gates, K.4    Frazelle, A.5    Di Maio, J.6
  • 22
    • 0025974210 scopus 로고
    • Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa
    • Galimand M, Gamper M, Zimmermann A, Haas D. Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa. J Bacteriol 1991, 173:1598-1606.
    • (1991) J Bacteriol , vol.173 , pp. 1598-1606
    • Galimand, M.1    Gamper, M.2    Zimmermann, A.3    Haas, D.4
  • 23
    • 0025812353 scopus 로고
    • Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa
    • Gamper M, Zimmermann A, Haas D. Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa. J Bacteriol 1991, 173:4742-4750.
    • (1991) J Bacteriol , vol.173 , pp. 4742-4750
    • Gamper, M.1    Zimmermann, A.2    Haas, D.3
  • 25
    • 0035081876 scopus 로고    scopus 로고
    • SirA orthologs affect both motility and virulence
    • Goodier RI, Ahmer BM. SirA orthologs affect both motility and virulence. J Bacteriol 2001, 183:2249-2258.
    • (2001) J Bacteriol , vol.183 , pp. 2249-2258
    • Goodier, R.I.1    Ahmer, B.M.2
  • 26
    • 58849118157 scopus 로고    scopus 로고
    • Direct interaction between sensor kinase proteins mediates acute and chronic disease phenotypes in a bacterial pathogen
    • Goodman AL, Merighi M, Hyodo M, Ventre I, Filloux A, Lory S. Direct interaction between sensor kinase proteins mediates acute and chronic disease phenotypes in a bacterial pathogen. Genes Dev 2009, 23:249-259.
    • (2009) Genes Dev , vol.23 , pp. 249-259
    • Goodman, A.L.1    Merighi, M.2    Hyodo, M.3    Ventre, I.4    Filloux, A.5    Lory, S.6
  • 27
    • 70350736705 scopus 로고    scopus 로고
    • Genomics of secondary metabolism by Pseudomonas spp
    • Gross H, Loper JE. Genomics of secondary metabolism by Pseudomonas spp. Nat Prod Rep 2009, 26:1408-1446.
    • (2009) Nat Prod Rep , vol.26 , pp. 1408-1446
    • Gross, H.1    Loper, J.E.2
  • 28
    • 33846294440 scopus 로고    scopus 로고
    • The genomisotopic approach: a systematic method to isolate products of orphan biosynthetic gene clusters
    • Gross H, Stockwell VO, Henkels MD, Nowak-Thompson B, Loper JE, Gerwick WH. The genomisotopic approach: a systematic method to isolate products of orphan biosynthetic gene clusters. Chem Biol 2007, 14:53-63.
    • (2007) Chem Biol , vol.14 , pp. 53-63
    • Gross, H.1    Stockwell, V.O.2    Henkels, M.D.3    Nowak-Thompson, B.4    Loper, J.E.5    Gerwick, W.H.6
  • 29
    • 0242507789 scopus 로고    scopus 로고
    • Regulation of antibiotic production in root-colonizing Pseudomonas spp. and relevance for biological control of plant disease
    • Haas D, Keel C. Regulation of antibiotic production in root-colonizing Pseudomonas spp. and relevance for biological control of plant disease. Annu Rev Phytopathol 2003, 41:117-153.
    • (2003) Annu Rev Phytopathol , vol.41 , pp. 117-153
    • Haas, D.1    Keel, C.2
  • 30
    • 0031039076 scopus 로고    scopus 로고
    • Fumarase C activity is elevated in response to iron deprivation and in mucoid, alginate-producing Pseudomonas aeruginosa: cloning and characterization of fumC and purification of native FumC
    • Hassett DJ, Howell ML, Sokol PA, Vasil ML, Dean GE. Fumarase C activity is elevated in response to iron deprivation and in mucoid, alginate-producing Pseudomonas aeruginosa: cloning and characterization of fumC and purification of native FumC. J Bacteriol 1997a, 179:1442-1451.
    • (1997) J Bacteriol , vol.179 , pp. 1442-1451
    • Hassett, D.J.1    Howell, M.L.2    Sokol, P.A.3    Vasil, M.L.4    Dean, G.E.5
  • 31
    • 0031058129 scopus 로고    scopus 로고
    • An operon containing fumC and sodA encoding fumarase C and manganese superoxide dismutase is controlled by the ferric uptake regulator in Pseudomonas aeruginosa: fur mutants produce elevated alginate levels
    • Hassett DJ, Howell ML, Ochsner UA, Vasil ML, Johnson Z, Dean GE. An operon containing fumC and sodA encoding fumarase C and manganese superoxide dismutase is controlled by the ferric uptake regulator in Pseudomonas aeruginosa: fur mutants produce elevated alginate levels. J Bacteriol 1997b, 179:1452-1459.
    • (1997) J Bacteriol , vol.179 , pp. 1452-1459
    • Hassett, D.J.1    Howell, M.L.2    Ochsner, U.A.3    Vasil, M.L.4    Johnson, Z.5    Dean, G.E.6
  • 32
    • 0036156940 scopus 로고    scopus 로고
    • Regulatory RNA as mediator in GacA/RsmA-dependent global control of exoproduct formation in Pseudomonas fluorescens CHA0
    • Heeb S, Blumer C, Haas D. Regulatory RNA as mediator in GacA/RsmA-dependent global control of exoproduct formation in Pseudomonas fluorescens CHA0. J Bacteriol 2002, 184:1046-1056.
    • (2002) J Bacteriol , vol.184 , pp. 1046-1056
    • Heeb, S.1    Blumer, C.2    Haas, D.3
  • 33
    • 12844260889 scopus 로고    scopus 로고
    • Role of the stress sigma factor RpoS in GacA/RsmA-controlled secondary metabolism and resistance to oxidative stress in Pseudomonas fluorescens CHA0
    • Heeb S, Valverde C, Gigot-Bonnefoy C, Haas D. Role of the stress sigma factor RpoS in GacA/RsmA-controlled secondary metabolism and resistance to oxidative stress in Pseudomonas fluorescens CHA0. FEMS Microbiol Lett 2005, 243:251-258.
    • (2005) FEMS Microbiol Lett , vol.243 , pp. 251-258
    • Heeb, S.1    Valverde, C.2    Gigot-Bonnefoy, C.3    Haas, D.4
  • 34
    • 0032575051 scopus 로고    scopus 로고
    • A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants
    • Hoang TT, Karkhoff-Schweizer RR, Kutchma AJ, Schweizer HP. A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants. Gene 1998, 212:77-86.
    • (1998) Gene , vol.212 , pp. 77-86
    • Hoang, T.T.1    Karkhoff-Schweizer, R.R.2    Kutchma, A.J.3    Schweizer, H.P.4
  • 35
    • 0000625018 scopus 로고
    • Control of Rhizoctonia solani in cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium
    • Howell CR, Stipanovic RD. Control of Rhizoctonia solani in cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium. Phytopathology 1979, 69:480-482.
    • (1979) Phytopathology , vol.69 , pp. 480-482
    • Howell, C.R.1    Stipanovic, R.D.2
  • 36
    • 0000625019 scopus 로고
    • Suppression of Pythium ultimum induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic pyoluteorin
    • Howell CR, Stipanovic RD. Suppression of Pythium ultimum induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic pyoluteorin. Phytopathology 1980, 70:712-715.
    • (1980) Phytopathology , vol.70 , pp. 712-715
    • Howell, C.R.1    Stipanovic, R.D.2
  • 37
    • 50649117912 scopus 로고    scopus 로고
    • Cellular defenses against superoxide and hydrogen peroxide
    • Imlay JA. Cellular defenses against superoxide and hydrogen peroxide. Annu Rev Biochem 2008, 77:755-776.
    • (2008) Annu Rev Biochem , vol.77 , pp. 755-776
    • Imlay, J.A.1
  • 38
    • 0043126983 scopus 로고    scopus 로고
    • Toxoflavin produced by Burkholderia glumae causing rice grain rot is responsible for inducing bacterial wilt in many field crops
    • Jeong Y, Kim J, Kim S, Kang Y, Nagamatsu T, Hwang I. Toxoflavin produced by Burkholderia glumae causing rice grain rot is responsible for inducing bacterial wilt in many field crops. Plant Disease 2003, 87:890-895.
    • (2003) Plant Disease , vol.87 , pp. 890-895
    • Jeong, Y.1    Kim, J.2    Kim, S.3    Kang, Y.4    Nagamatsu, T.5    Hwang, I.6
  • 39
    • 28044473169 scopus 로고    scopus 로고
    • Three small RNAs jointly ensure secondary metabolism and biocontrol in Pseudomonas fluorescens CHA0
    • Kay E, Dubuis C, Haas D. Three small RNAs jointly ensure secondary metabolism and biocontrol in Pseudomonas fluorescens CHA0. Proc Natl Acad Sci USA 2005, 102:17136-17141.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 17136-17141
    • Kay, E.1    Dubuis, C.2    Haas, D.3
  • 40
    • 8544231380 scopus 로고    scopus 로고
    • Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae
    • Kim J, Kim JG, Kang Y, Jang JY, Jog GJ, Lim JY. Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae. Mol Microbiol 2004, 54:921-934.
    • (2004) Mol Microbiol , vol.54 , pp. 921-934
    • Kim, J.1    Kim, J.G.2    Kang, Y.3    Jang, J.Y.4    Jog, G.J.5    Lim, J.Y.6
  • 41
    • 43349086724 scopus 로고
    • Two simple media for the demonstration of pyocyanin and fluorescin
    • King EO, Ward MK, Raney DE. Two simple media for the demonstration of pyocyanin and fluorescin. J Lab Clin Med 1954, 44:301-307.
    • (1954) J Lab Clin Med , vol.44 , pp. 301-307
    • King, E.O.1    Ward, M.K.2    Raney, D.E.3
  • 42
    • 0033034448 scopus 로고    scopus 로고
    • Swarming by Pseudomonas syringae B728a requires gacS (lemA) and gacA but not the acyl-homoserine lactone biosynthetic gene ahlI
    • Kinscherf TG, Willis DK. Swarming by Pseudomonas syringae B728a requires gacS (lemA) and gacA but not the acyl-homoserine lactone biosynthetic gene ahlI. J Bacteriol 1999, 181:4133-4136.
    • (1999) J Bacteriol , vol.181 , pp. 4133-4136
    • Kinscherf, T.G.1    Willis, D.K.2
  • 43
    • 0344153756 scopus 로고    scopus 로고
    • Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs
    • Korner H, Sofia HJ, Zumft WG. Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. FEMS Microbiol Rev 2003, 27:559-592.
    • (2003) FEMS Microbiol Rev , vol.27 , pp. 559-592
    • Korner, H.1    Sofia, H.J.2    Zumft, W.G.3
  • 44
    • 37349027967 scopus 로고    scopus 로고
    • Gac/Rsm signal transduction pathway of gamma-proteobacteria: from RNA recognition to regulation of social behaviour
    • Lapouge K, Schubert M, Allain FHT, Haas D. Gac/Rsm signal transduction pathway of gamma-proteobacteria: from RNA recognition to regulation of social behaviour. Mol Microbiol 2008, 67:241-253.
    • (2008) Mol Microbiol , vol.67 , pp. 241-253
    • Lapouge, K.1    Schubert, M.2    Allain, F.H.T.3    Haas, D.4
  • 45
    • 0026592642 scopus 로고
    • Global control in Pseudomonas fluorescens mediating antibiotic synthesis and suppression of black root rot of tobacco
    • Laville J, Voisard C, Keel C, Maurhofer M, Defago G, Haas D. Global control in Pseudomonas fluorescens mediating antibiotic synthesis and suppression of black root rot of tobacco. Proc Natl Acad Sci USA 1992, 89:1562-1566.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 1562-1566
    • Laville, J.1    Voisard, C.2    Keel, C.3    Maurhofer, M.4    Defago, G.5    Haas, D.6
  • 46
    • 0031750270 scopus 로고    scopus 로고
    • Characterization of the hcnABC gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent Pseudomonas fluorescens CHA0
    • Laville J, Blumer C, Von Schroetter C, Gaia V, Defago G, Keel C, Haas D. Characterization of the hcnABC gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent Pseudomonas fluorescens CHA0. J Bacteriol 1998, 180:3187-3196.
    • (1998) J Bacteriol , vol.180 , pp. 3187-3196
    • Laville, J.1    Blumer, C.2    Von Schroetter, C.3    Gaia, V.4    Defago, G.5    Keel, C.6    Haas, D.7
  • 47
    • 0034006501 scopus 로고    scopus 로고
    • Functional analysis of PvdS, an iron starvation sigma factor of Pseudomonas aeruginosa
    • Leoni L, Orsi N, de Lorenzo V, Visca P. Functional analysis of PvdS, an iron starvation sigma factor of Pseudomonas aeruginosa. J Bacteriol 2000, 182:1481-1491.
    • (2000) J Bacteriol , vol.182 , pp. 1481-1491
    • Leoni, L.1    Orsi, N.2    de Lorenzo, V.3    Visca, P.4
  • 48
    • 33846523370 scopus 로고    scopus 로고
    • The genomic sequence of Pseudomonas fluorescens Pf-5: insights into biological control
    • Loper JE, Kobayashi DY, Paulsen IT. The genomic sequence of Pseudomonas fluorescens Pf-5: insights into biological control. Phytopathology 2007, 97:233-238.
    • (2007) Phytopathology , vol.97 , pp. 233-238
    • Loper, J.E.1    Kobayashi, D.Y.2    Paulsen, I.T.3
  • 49
    • 44249127964 scopus 로고    scopus 로고
    • Isolation and identification of rhizoxin analogs from Pseudomonas fluorescens Pf-5 using a genomic mining strategy
    • Loper JE, Henkels MD, Shaffer BT, Valeriote FA, Gross H. Isolation and identification of rhizoxin analogs from Pseudomonas fluorescens Pf-5 using a genomic mining strategy. Appl Environ Microbiol 2008, 74:3085-3093.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 3085-3093
    • Loper, J.E.1    Henkels, M.D.2    Shaffer, B.T.3    Valeriote, F.A.4    Gross, H.5
  • 50
    • 33747078286 scopus 로고    scopus 로고
    • Phenazine compounds in fluorescent Pseudomonas spp. biosynthesis and regulation
    • Mavrodi DV, Blakenfeldt W, Thomashow LS. Phenazine compounds in fluorescent Pseudomonas spp. biosynthesis and regulation. Annu Rev Phytopathol 2006, 44:417-445.
    • (2006) Annu Rev Phytopathol , vol.44 , pp. 417-445
    • Mavrodi, D.V.1    Blakenfeldt, W.2    Thomashow, L.S.3
  • 51
    • 26944468295 scopus 로고    scopus 로고
    • PchR-box recognition by the AraC-type regulator PchR of Pseudomonas aeruginosa requires the siderophore pyochelin as an effector
    • Michel L, Gonzalez N, Jagdeep S, Nguyen-Ngoc T, Reimmann C. PchR-box recognition by the AraC-type regulator PchR of Pseudomonas aeruginosa requires the siderophore pyochelin as an effector. Mol Microbiol 2005, 58:495-509.
    • (2005) Mol Microbiol , vol.58 , pp. 495-509
    • Michel, L.1    Gonzalez, N.2    Jagdeep, S.3    Nguyen-Ngoc, T.4    Reimmann, C.5
  • 52
    • 33744974779 scopus 로고    scopus 로고
    • A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus
    • Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Science 2006, 312:1526-1530.
    • (2006) Science , vol.312 , pp. 1526-1530
    • Mougous, J.D.1    Cuff, M.E.2    Raunser, S.3    Shen, A.4    Zhou, M.5    Gifford, C.A.6
  • 53
    • 0033955445 scopus 로고    scopus 로고
    • Genetics and regulation of two distinct haem-uptake systems, phu and has, in Pseudomonas aeruginosa
    • Ochsner UA, Johnson Z, Vasil ML. Genetics and regulation of two distinct haem-uptake systems, phu and has, in Pseudomonas aeruginosa. Microbiology 2000, 146(Pt 1):185-198.
    • (2000) Microbiology , vol.146 , Issue.PART 1 , pp. 185-198
    • Ochsner, U.A.1    Johnson, Z.2    Vasil, M.L.3
  • 54
    • 0035982906 scopus 로고    scopus 로고
    • GeneChip expression analysis of the iron starvation response in Pseudomonas aeruginosa: identification of novel pyoverdine biosynthesis genes
    • Ochsner UA, Wilderman PJ, Vasil AI, Vasil ML. GeneChip expression analysis of the iron starvation response in Pseudomonas aeruginosa: identification of novel pyoverdine biosynthesis genes. Mol Microbiol 2002, 45:1277-1287.
    • (2002) Mol Microbiol , vol.45 , pp. 1277-1287
    • Ochsner, U.A.1    Wilderman, P.J.2    Vasil, A.I.3    Vasil, M.L.4
  • 56
    • 0346991729 scopus 로고    scopus 로고
    • Transcriptome analysis of the response of Pseudomonas aeruginosa to hydrogen peroxide
    • Palma M, DeLuca D, Worgall S, Quadri LE. Transcriptome analysis of the response of Pseudomonas aeruginosa to hydrogen peroxide. J Bacteriol 2004, 186:248-252.
    • (2004) J Bacteriol , vol.186 , pp. 248-252
    • Palma, M.1    DeLuca, D.2    Worgall, S.3    Quadri, L.E.4
  • 57
    • 0034971666 scopus 로고    scopus 로고
    • Pseudomonas aeruginosa GacA, a factor in multihost virulence, is also essential for biofilm formation
    • Parkins MD, Ceri H, Storey DG. Pseudomonas aeruginosa GacA, a factor in multihost virulence, is also essential for biofilm formation. Mol Microbiol 2001, 40:1215-1226.
    • (2001) Mol Microbiol , vol.40 , pp. 1215-1226
    • Parkins, M.D.1    Ceri, H.2    Storey, D.G.3
  • 58
    • 25144471060 scopus 로고    scopus 로고
    • Novel lectin-like bacteriocins of biocontrol strain Pseudomonas fluorescens Pf-5
    • Parret AH, Temmerman K, De Mot R. Novel lectin-like bacteriocins of biocontrol strain Pseudomonas fluorescens Pf-5. Appl Environ Microbiol 2005, 71:5197-5207.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 5197-5207
    • Parret, A.H.1    Temmerman, K.2    De Mot, R.3
  • 60
    • 48749103307 scopus 로고    scopus 로고
    • Molecular analysis of a novel gene cluster encoding an insect toxin in plant-associated strains of Pseudomonas fluorescens
    • Pechy-Tarr M, Bruck DJ, Maurhofer M, Fischer E, Vogne C, Henkels MD. Molecular analysis of a novel gene cluster encoding an insect toxin in plant-associated strains of Pseudomonas fluorescens. Environ Microbiol 2008, 10:2368-2386.
    • (2008) Environ Microbiol , vol.10 , pp. 2368-2386
    • Pechy-Tarr, M.1    Bruck, D.J.2    Maurhofer, M.3    Fischer, E.4    Vogne, C.5    Henkels, M.D.6
  • 61
    • 10744228370 scopus 로고    scopus 로고
    • Identification of competence pheromone responsive genes in Streptococcus pneumoniae by use of DNA microarrays
    • Peterson SN, Sung CK, Cline R, Desai BV, Snesrud EC, Luo P. Identification of competence pheromone responsive genes in Streptococcus pneumoniae by use of DNA microarrays. Mol Microbiol 2004, 51:1051-1070.
    • (2004) Mol Microbiol , vol.51 , pp. 1051-1070
    • Peterson, S.N.1    Sung, C.K.2    Cline, R.3    Desai, B.V.4    Snesrud, E.C.5    Luo, P.6
  • 63
    • 0033928977 scopus 로고    scopus 로고
    • Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation
    • Poole RK, Cook GM. Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation. Adv Microb Physiol 2000, 43:165-224.
    • (2000) Adv Microb Physiol , vol.43 , pp. 165-224
    • Poole, R.K.1    Cook, G.M.2
  • 64
    • 31944433740 scopus 로고    scopus 로고
    • Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system
    • Pukatzki S, Ma AT, Sturtevant D, Krastins B, Sarracino D, Nelson WC. Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system. Proc Natl Acad Sci USA 2006, 103:1528-1533.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 1528-1533
    • Pukatzki, S.1    Ma, A.T.2    Sturtevant, D.3    Krastins, B.4    Sarracino, D.5    Nelson, W.C.6
  • 65
    • 0031573035 scopus 로고    scopus 로고
    • The effects of mutation of the anr gene on the aerobic respiratory chain of Pseudomonas aeruginosa
    • Ray A, Williams HD. The effects of mutation of the anr gene on the aerobic respiratory chain of Pseudomonas aeruginosa. FEMS Microbiol Lett 1997, 156:227-232.
    • (1997) FEMS Microbiol Lett , vol.156 , pp. 227-232
    • Ray, A.1    Williams, H.D.2
  • 66
    • 11144346281 scopus 로고    scopus 로고
    • Posttranscriptional repression of GacS/GacA-controlled genes by the RNA-binding protein RsmE acting together with RsmA in the biocontrol strain Pseudomonas fluorescens CHA0
    • Reimmann C, Valverde C, Kay E, Haas D. Posttranscriptional repression of GacS/GacA-controlled genes by the RNA-binding protein RsmE acting together with RsmA in the biocontrol strain Pseudomonas fluorescens CHA0. J Bacteriol 2005, 187:276-285.
    • (2005) J Bacteriol , vol.187 , pp. 276-285
    • Reimmann, C.1    Valverde, C.2    Kay, E.3    Haas, D.4
  • 67
    • 15144342710 scopus 로고    scopus 로고
    • Regulation of Pseudomonas aeruginosa hemF and hemN by the dual action of the redox response regulators Anr and Dnr
    • Rompf A, Hungerer C, Hoffmann T, Lindenmeyer M, Romling U, Gross U. Regulation of Pseudomonas aeruginosa hemF and hemN by the dual action of the redox response regulators Anr and Dnr. Mol Microbiol 1998, 29:985-997.
    • (1998) Mol Microbiol , vol.29 , pp. 985-997
    • Rompf, A.1    Hungerer, C.2    Hoffmann, T.3    Lindenmeyer, M.4    Romling, U.5    Gross, U.6
  • 68
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 69
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol 2000, 132:365-386.
    • (2000) Methods Mol Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 70
    • 16844381838 scopus 로고    scopus 로고
    • Genome-wide transcriptional profiling of the steady-state response of Pseudomonas aeruginosa to hydrogen peroxide
    • Salunkhe P, Topfer T, Buer J, Tummler B. Genome-wide transcriptional profiling of the steady-state response of Pseudomonas aeruginosa to hydrogen peroxide. J Bacteriol 2005, 187:2565-2572.
    • (2005) J Bacteriol , vol.187 , pp. 2565-2572
    • Salunkhe, P.1    Topfer, T.2    Buer, J.3    Tummler, B.4
  • 71
    • 0031000744 scopus 로고    scopus 로고
    • The global regulator GacA of Pseudomonas fluorescens CHA0 is required for suppression of root diseases in dicotyledons but not in Gramineae
    • Schmidli-Sacherer P, Keel C, Defago G. The global regulator GacA of Pseudomonas fluorescens CHA0 is required for suppression of root diseases in dicotyledons but not in Gramineae. Plant Pathol 1997, 46:80-90.
    • (1997) Plant Pathol , vol.46 , pp. 80-90
    • Schmidli-Sacherer, P.1    Keel, C.2    Defago, G.3
  • 73
    • 0021027842 scopus 로고
    • A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram negative bacteria
    • Simon R, Priefer U, Pühler A. A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram negative bacteria. Bio/Technology 1983, 1:784-791.
    • (1983) Bio/Technology , vol.1 , pp. 784-791
    • Simon, R.1    Priefer, U.2    Pühler, A.3
  • 74
    • 24944588044 scopus 로고    scopus 로고
    • The sigma factor RpoS is required for stress tolerance and environmental fitness of Pseudomonas fluorescens Pf-5
    • Stockwell VO, Loper JE. The sigma factor RpoS is required for stress tolerance and environmental fitness of Pseudomonas fluorescens Pf-5. Microbiology 2005, 151:3001-3009.
    • (2005) Microbiology , vol.151 , pp. 3001-3009
    • Stockwell, V.O.1    Loper, J.E.2
  • 75
    • 3042826857 scopus 로고    scopus 로고
    • Molecular characterization of the tox operon involved in toxoflavin biosynthesis of Burkholderia glumae
    • Suzuki F, Sawada H, Azegami K, Tsuchiya K. Molecular characterization of the tox operon involved in toxoflavin biosynthesis of Burkholderia glumae. J Gen Plant Pathol 2004, 70:97-107.
    • (2004) J Gen Plant Pathol , vol.70 , pp. 97-107
    • Suzuki, F.1    Sawada, H.2    Azegami, K.3    Tsuchiya, K.4
  • 76
    • 42549102413 scopus 로고    scopus 로고
    • Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads
    • Swingle B, Thete D, Moll M, Myers CR, Schneider DJ, Cartinhour S. Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads. Mol Microbiol 2008, 68:871-889.
    • (2008) Mol Microbiol , vol.68 , pp. 871-889
    • Swingle, B.1    Thete, D.2    Moll, M.3    Myers, C.R.4    Schneider, D.J.5    Cartinhour, S.6
  • 77
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R, Chu G. Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 2001, 98:5116-5121.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 78
    • 0344394978 scopus 로고    scopus 로고
    • RsmY, a small regulatory RNA, is required in concert with RsmZ for GacA-dependent expression of biocontrol traits in Pseudomonas fluorescens CHA0
    • Valverde C, Heeb S, Keel C, Haas D. RsmY, a small regulatory RNA, is required in concert with RsmZ for GacA-dependent expression of biocontrol traits in Pseudomonas fluorescens CHA0. Mol Microbiol 2003, 50:1361-1379.
    • (2003) Mol Microbiol , vol.50 , pp. 1361-1379
    • Valverde, C.1    Heeb, S.2    Keel, C.3    Haas, D.4
  • 79
    • 0020442864 scopus 로고
    • The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers
    • Vieira J, Messing J. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 1982, 19:259-268.
    • (1982) Gene , vol.19 , pp. 259-268
    • Vieira, J.1    Messing, J.2
  • 80
    • 33845951124 scopus 로고    scopus 로고
    • Pyoverdine siderophores: from biogenesis to biosignificance
    • Visca P, Imperi F, Lamont IL. Pyoverdine siderophores: from biogenesis to biosignificance. Trends Microbiol 2007, 15:22-30.
    • (2007) Trends Microbiol , vol.15 , pp. 22-30
    • Visca, P.1    Imperi, F.2    Lamont, I.L.3
  • 81
    • 9244234392 scopus 로고    scopus 로고
    • Bacterial iron sources: from siderophores to hemophores
    • Wandersman C, Delepelaire P. Bacterial iron sources: from siderophores to hemophores. Annu Rev Microbiol 2004, 58:611-647.
    • (2004) Annu Rev Microbiol , vol.58 , pp. 611-647
    • Wandersman, C.1    Delepelaire, P.2
  • 82
    • 0032436624 scopus 로고    scopus 로고
    • The two-component regulators GacS and GacA influence accumulation of the stationary-phase sigma factor sigmaS and the stress response in Pseudomonas fluorescens Pf-5
    • Whistler CA, Corbell NA, Sarniguet A, Ream W, Loper JE. The two-component regulators GacS and GacA influence accumulation of the stationary-phase sigma factor sigmaS and the stress response in Pseudomonas fluorescens Pf-5. J Bacteriol 1998, 180:6635-6641.
    • (1998) J Bacteriol , vol.180 , pp. 6635-6641
    • Whistler, C.A.1    Corbell, N.A.2    Sarniguet, A.3    Ream, W.4    Loper, J.E.5
  • 83
    • 0033944425 scopus 로고    scopus 로고
    • Lon protease influences antibiotic production and UV tolerance of Pseudomonas fluorescens Pf-5
    • Whistler CA, Stockwell VO, Loper JE. Lon protease influences antibiotic production and UV tolerance of Pseudomonas fluorescens Pf-5. Appl Environ Microbiol 2000, 66:2718-2725.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 2718-2725
    • Whistler, C.A.1    Stockwell, V.O.2    Loper, J.E.3
  • 84
    • 0033890178 scopus 로고    scopus 로고
    • Characterization of an ECF sigma factor protein from Pseudomonas aeruginosa
    • Wilson MJ, Lamont IL. Characterization of an ECF sigma factor protein from Pseudomonas aeruginosa. Biochem Biophys Res Commun 2000, 273:578-583.
    • (2000) Biochem Biophys Res Commun , vol.273 , pp. 578-583
    • Wilson, M.J.1    Lamont, I.L.2
  • 85
    • 37249020818 scopus 로고    scopus 로고
    • Pseudomonas fluorescens CHA0 produces enantio-pyochelin, the optical antipode of the Pseudomonas aeruginosa siderophore pyochelin
    • Youard ZA, Mislin GL, Majcherczyk PA, Schalk IJ, Reimmann C. Pseudomonas fluorescens CHA0 produces enantio-pyochelin, the optical antipode of the Pseudomonas aeruginosa siderophore pyochelin. J Biol Chem 2007, 282:35546-35553.
    • (2007) J Biol Chem , vol.282 , pp. 35546-35553
    • Youard, Z.A.1    Mislin, G.L.2    Majcherczyk, P.A.3    Schalk, I.J.4    Reimmann, C.5
  • 86
    • 0034461244 scopus 로고    scopus 로고
    • Degradation of heme in gram-negative bacteria: the product of the hemO gene of Neisseriae is a heme oxygenase
    • Zhu W, Wilks A, Stojiljkovic I. Degradation of heme in gram-negative bacteria: the product of the hemO gene of Neisseriae is a heme oxygenase. J Bacteriol 2000, 182:6783-6790.
    • (2000) J Bacteriol , vol.182 , pp. 6783-6790
    • Zhu, W.1    Wilks, A.2    Stojiljkovic, I.3
  • 87
    • 0037869573 scopus 로고    scopus 로고
    • GacS sensor domains pertinent to the regulation of exoproduct formation and to the biocontrol potential of Pseudomonas fluorescens CHA0
    • Zuber S, Carruthers F, Keel C, Mattart A, Blumer C, Pessi G. GacS sensor domains pertinent to the regulation of exoproduct formation and to the biocontrol potential of Pseudomonas fluorescens CHA0. Mol Plant Microbe Interact 2003, 16:634-644.
    • (2003) Mol Plant Microbe Interact , vol.16 , pp. 634-644
    • Zuber, S.1    Carruthers, F.2    Keel, C.3    Mattart, A.4    Blumer, C.5    Pessi, G.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.