-
1
-
-
78549278708
-
Triggers for genomic rearrangements: insights into genomic, cellular and environmental influences
-
Mani RS, Chinnaiyan AM. Triggers for genomic rearrangements: insights into genomic, cellular and environmental influences. Nat Rev Genet. 2010;11:819-29.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 819-829
-
-
Mani, R.S.1
Chinnaiyan, A.M.2
-
2
-
-
33947581390
-
The impact of translocations and gene fusions on cancer causation
-
Mitelman F, Johansson B, Mertens F. The impact of translocations and gene fusions on cancer causation. Nat Rev Cancer. 2007;7:233-45.
-
(2007)
Nat Rev Cancer
, vol.7
, pp. 233-245
-
-
Mitelman, F.1
Johansson, B.2
Mertens, F.3
-
3
-
-
49449106091
-
Chromosomal abnormalities in cancer
-
Frohling S, Dohner H. Chromosomal abnormalities in cancer. N Engl J Med. 2008;359:722-34.
-
(2008)
N Engl J Med
, vol.359
, pp. 722-734
-
-
Frohling, S.1
Dohner, H.2
-
4
-
-
80053558376
-
Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells
-
Chiarle R, Zhang Y, Frock RL, Lewis SM, Molinie B, Ho YJ, et al. Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells. Cell. 2011;147:107-19.
-
(2011)
Cell
, vol.147
, pp. 107-119
-
-
Chiarle, R.1
Zhang, Y.2
Frock, R.L.3
Lewis, S.M.4
Molinie, B.5
Ho, Y.J.6
-
5
-
-
80053502216
-
Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes
-
Klein IA, Resch W, Jankovic M, Oliveira T, Yamane A, Nakahashi H, et al. Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes. Cell. 2011;147:95-106.
-
(2011)
Cell
, vol.147
, pp. 95-106
-
-
Klein, I.A.1
Resch, W.2
Jankovic, M.3
Oliveira, T.4
Yamane, A.5
Nakahashi, H.6
-
6
-
-
79953724351
-
Next-generation sequencing strategies enable routine detection of balanced chromosome rearrangements for clinical diagnostics and genetic research
-
Talkowski ME, Ernst C, Heilbut A, Chiang C, Hanscom C, Lindgren A, et al. Next-generation sequencing strategies enable routine detection of balanced chromosome rearrangements for clinical diagnostics and genetic research. Am J Hum Genet. 2011;88:469-81.
-
(2011)
Am J Hum Genet
, vol.88
, pp. 469-481
-
-
Talkowski, M.E.1
Ernst, C.2
Heilbut, A.3
Chiang, C.4
Hanscom, C.5
Lindgren, A.6
-
7
-
-
34247894060
-
Guidance for fluorescence in situ hybridization testing in hematologic disorders
-
Wolff DJ, Bagg A, Cooley LD, Dewald GW, Hirsch BA, Jacky PB, et al. Guidance for fluorescence in situ hybridization testing in hematologic disorders. J Mol Diagn. 2007;9:134-43.
-
(2007)
J Mol Diagn
, vol.9
, pp. 134-143
-
-
Wolff, D.J.1
Bagg, A.2
Cooley, L.D.3
Dewald, G.W.4
Hirsch, B.A.5
Jacky, P.B.6
-
8
-
-
0033794572
-
Fluorescence in situ hybridization: uses and limitations
-
Gozzetti A, Le Beau MM. Fluorescence in situ hybridization: uses and limitations. Semin Hematol. 2000;37:320-33.
-
(2000)
Semin Hematol
, vol.37
, pp. 320-333
-
-
Gozzetti, A.1
Beau, M.M.2
-
10
-
-
39149137515
-
A simple FISH assay for the detection of 3q26 rearrangements in myeloid malignancy
-
De Melo V, Vetter M, Mazzullo H, Howard JD, Betts DR, Nacheva EP, et al. A simple FISH assay for the detection of 3q26 rearrangements in myeloid malignancy. Leukemia. 2008;22:434-7.
-
(2008)
Leukemia
, vol.22
, pp. 434-437
-
-
Melo, V.1
Vetter, M.2
Mazzullo, H.3
Howard, J.D.4
Betts, D.R.5
Nacheva, E.P.6
-
11
-
-
77149130553
-
Automated microscopy for high-content RNAi screening
-
Conrad C, Gerlich DW. Automated microscopy for high-content RNAi screening. J Cell Biol. 2010;188:453-61.
-
(2010)
J Cell Biol
, vol.188
, pp. 453-461
-
-
Conrad, C.1
Gerlich, D.W.2
-
12
-
-
84863208608
-
Biological imaging software tools
-
Eliceiri KW, Berthold MR, Goldberg IG, Ibanez L, Manjunath BS, Martone ME, et al. Biological imaging software tools. Nat Methods. 2012;9:697-710.
-
(2012)
Nat Methods
, vol.9
, pp. 697-710
-
-
Eliceiri, K.W.1
Berthold, M.R.2
Goldberg, I.G.3
Ibanez, L.4
Manjunath, B.S.5
Martone, M.E.6
-
13
-
-
84927125938
-
Single-cell and multivariate approaches in genetic perturbation screens
-
Liberali P, Snijder B, Pelkmans L. Single-cell and multivariate approaches in genetic perturbation screens. Nat Rev Genet. 2015;16:18-32.
-
(2015)
Nat Rev Genet
, vol.16
, pp. 18-32
-
-
Liberali, P.1
Snijder, B.2
Pelkmans, L.3
-
14
-
-
84905044640
-
Deep Imaging: the next frontier in microscopy
-
Roukos V, Misteli T. Deep Imaging: the next frontier in microscopy. Histochem Cell Biol. 2014;142:125-31.
-
(2014)
Histochem Cell Biol
, vol.142
, pp. 125-131
-
-
Roukos, V.1
Misteli, T.2
-
15
-
-
84880223497
-
Beyond NPM-anaplastic lymphoma kinase driven lymphomagenesis: alternative drivers in anaplastic large cell lymphoma
-
Tabbo F, Ponzoni M, Rabadan R, Bertoni F, Inghirami G. Beyond NPM-anaplastic lymphoma kinase driven lymphomagenesis: alternative drivers in anaplastic large cell lymphoma. Curr Opin Hematol. 2013;20:374-81.
-
(2013)
Curr Opin Hematol
, vol.20
, pp. 374-381
-
-
Tabbo, F.1
Ponzoni, M.2
Rabadan, R.3
Bertoni, F.4
Inghirami, G.5
-
16
-
-
33744516644
-
FISH analysis for the detection of lymphoma-associated chromosomal abnormalities in routine paraffin-embedded tissue
-
Ventura RA, Martin-Subero JI, Jones M, McParland J, Gesk S, Mason DY, et al. FISH analysis for the detection of lymphoma-associated chromosomal abnormalities in routine paraffin-embedded tissue. J Mol Diagn. 2006;8:141-51.
-
(2006)
J Mol Diagn
, vol.8
, pp. 141-151
-
-
Ventura, R.A.1
Martin-Subero, J.I.2
Jones, M.3
McParland, J.4
Gesk, S.5
Mason, D.Y.6
-
17
-
-
0035839867
-
Translocations involving anaplastic lymphoma kinase (ALK)
-
Duyster J, Bai RY, Morris SW. Translocations involving anaplastic lymphoma kinase (ALK). Oncogene. 2001;20:5623-37.
-
(2001)
Oncogene
, vol.20
, pp. 5623-5637
-
-
Duyster, J.1
Bai, R.Y.2
Morris, S.W.3
-
18
-
-
84881255212
-
Spatial dynamics of chromosome translocations in living cells
-
Roukos V, Voss TC, Schmidt CK, Lee S, Wangsa D, Misteli T. Spatial dynamics of chromosome translocations in living cells. Science. 2013;341:660-4.
-
(2013)
Science
, vol.341
, pp. 660-664
-
-
Roukos, V.1
Voss, T.C.2
Schmidt, C.K.3
Lee, S.4
Wangsa, D.5
Misteli, T.6
-
19
-
-
65249165421
-
Gene deregulation and spatial genome reorganization near breakpoints prior to formation of translocations in anaplastic large cell lymphoma
-
Mathas S, Kreher S, Meaburn KJ, Johrens K, Lamprecht B, Assaf C, et al. Gene deregulation and spatial genome reorganization near breakpoints prior to formation of translocations in anaplastic large cell lymphoma. Proc Natl Acad Sci U S A. 2009;106:5831-6.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 5831-5836
-
-
Mathas, S.1
Kreher, S.2
Meaburn, K.J.3
Johrens, K.4
Lamprecht, B.5
Assaf, C.6
-
20
-
-
0037110124
-
Molecular cytogenetic aberrations in CD30+ anaplastic large cell lymphoma cell lines
-
Gogusev J, Telvi L, Nezelof C. Molecular cytogenetic aberrations in CD30+ anaplastic large cell lymphoma cell lines. Cancer Genet Cytogenet. 2002;138:95-101.
-
(2002)
Cancer Genet Cytogenet
, vol.138
, pp. 95-101
-
-
Gogusev, J.1
Telvi, L.2
Nezelof, C.3
-
21
-
-
0023789420
-
A Ki-1 (CD30)-positive human cell line (Karpas 299) established from a high-grade non-Hodgkin's lymphoma, showing a 2;5 translocation and rearrangement of the T-cell receptor beta-chain gene
-
Fischer P, Nacheva E, Mason DY, Sherrington PD, Hoyle C, Hayhoe FG, et al. A Ki-1 (CD30)-positive human cell line (Karpas 299) established from a high-grade non-Hodgkin's lymphoma, showing a 2;5 translocation and rearrangement of the T-cell receptor beta-chain gene. Blood. 1988;72:234-40.
-
(1988)
Blood
, vol.72
, pp. 234-240
-
-
Fischer, P.1
Nacheva, E.2
Mason, D.Y.3
Sherrington, P.D.4
Hoyle, C.5
Hayhoe, F.G.6
-
22
-
-
0027132042
-
Saturated and unsaturated repair of DNA strand breaks in CHO cells after X-irradiation with doses ranging from 3 to 90 Gy
-
Dikomey E, Lorenzen J. Saturated and unsaturated repair of DNA strand breaks in CHO cells after X-irradiation with doses ranging from 3 to 90 Gy. Int J Radiat Biol. 1993;64:659-67.
-
(1993)
Int J Radiat Biol
, vol.64
, pp. 659-667
-
-
Dikomey, E.1
Lorenzen, J.2
-
23
-
-
84899836224
-
Fusion FISH imaging: single-molecule detection of gene fusion transcripts in situ
-
Markey FB, Ruezinsky W, Tyagi S, Batish M. Fusion FISH imaging: single-molecule detection of gene fusion transcripts in situ. PLoS One. 2014;9, e93488.
-
(2014)
PLoS One
, vol.9
-
-
Markey, F.B.1
Ruezinsky, W.2
Tyagi, S.3
Batish, M.4
-
24
-
-
84892509630
-
FuseFISH: robust detection of transcribed gene fusions in single cells
-
Semrau S, Crosetto N, Bienko M, Boni M, Bernasconi P, Chiarle R, et al. FuseFISH: robust detection of transcribed gene fusions in single cells. Cell Rep. 2014;6:18-23.
-
(2014)
Cell Rep
, vol.6
, pp. 18-23
-
-
Semrau, S.1
Crosetto, N.2
Bienko, M.3
Boni, M.4
Bernasconi, P.5
Chiarle, R.6
-
25
-
-
84892968641
-
ALK as a paradigm of oncogenic promiscuity: different mechanisms of activation and different fusion partners drive tumors of different lineages
-
Marino-Enriquez A, Dal CP. ALK as a paradigm of oncogenic promiscuity: different mechanisms of activation and different fusion partners drive tumors of different lineages. Cancer Genet. 2013;206:357-73.
-
(2013)
Cancer Genet
, vol.206
, pp. 357-373
-
-
Marino-Enriquez, A.1
Dal, C.P.2
-
26
-
-
84938306617
-
-
Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.6h7nt .
-
-
-
-
27
-
-
84938352653
-
-
The R Project for Statistical Computing. http://www.R-project.org/ .
-
-
-
-
28
-
-
84938305279
-
-
R Studio. https://www.rstudio.com/ .
-
-
-
-
29
-
-
0032377357
-
Approximate is better than "exact" for interval estimation of binominal proportions
-
Agresti A, Coull BA. Approximate is better than "exact" for interval estimation of binominal proportions. Am Stat. 1998;52:119-26.
-
(1998)
Am Stat
, vol.52
, pp. 119-126
-
-
Agresti, A.1
Coull, B.A.2
|