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Volumn 241, Issue 2, 2015, Pages 275-287

New qualitative trait-specific SYBR®Green qPCR methods to expand the panel of GMO screening methods used in the CoSYPS

Author keywords

GMO; qPCR; Screening; SYBR Green

Indexed keywords

COST EFFECTIVENESS; SCREENING;

EID: 84937882701     PISSN: 14382377     EISSN: 14382385     Source Type: Journal    
DOI: 10.1007/s00217-015-2454-6     Document Type: Article
Times cited : (16)

References (57)
  • 1
    • 84937829584 scopus 로고    scopus 로고
    • ISAAA Brief 46
    • James C (2013) Global status of commercialized biotech/GM crops: 2013. ISAAA Brief 46. ISBN:978-892456-55-9
    • (2013) ISBN:978-892456-55-9
  • 2
    • 36048967657 scopus 로고    scopus 로고
    • A review of international labeling policies of genetically modified food to evaluate India’s proposed rule
    • Gruère GP, Rao SR (2007) A review of international labeling policies of genetically modified food to evaluate India’s proposed rule. AgBioForum 10(1):51–56
    • (2007) AgBioForum , vol.10 , Issue.1 , pp. 51-56
    • Gruère, G.P.1    Rao, S.R.2
  • 4
    • 84937907993 scopus 로고    scopus 로고
    • Commission Regulation (EC) No 1829/2003 of the European Parliament and of the Council of 22 September 2003 on genetically modified food and feed
    • European Parliament (2003) Commission Regulation (EC) No 1829/2003 of the European Parliament and of the Council of 22 September 2003 on genetically modified food and feed. Off J Eur Union L 26:23–81
    • (2003) Off J Eur Union L , vol.26 , pp. 23-81
  • 5
    • 54349108715 scopus 로고    scopus 로고
    • Commission Regulation (EC) No 641/2004 of 6 April 2004 on detailed rules for implementation of Regulation (EC) No 1829/2003 of the European Parliament and of the Council as regards the application for the authorisation of new genetically modified food and feed, the notification of existing products and adventitious or technically unavoidable presence of genetically modified material which has benefited from a favourable risk evaluation
    • European Commission (2004) Commission Regulation (EC) No 641/2004 of 6 April 2004 on detailed rules for implementation of Regulation (EC) No 1829/2003 of the European Parliament and of the Council as regards the application for the authorisation of new genetically modified food and feed, the notification of existing products and adventitious or technically unavoidable presence of genetically modified material which has benefited from a favourable risk evaluation. Off J Eur Union L 102:14–25
    • (2004) Off J Eur Union L , vol.102 , pp. 14-25
  • 6
    • 84855238603 scopus 로고    scopus 로고
    • Commission Regulation (EU) No 619/2011 of 24 June 2011 laying down the methods of sampling and analysis for the official control of feed as regards presence of genetically modified material for which an authorisation procedure is pending or the authorisation of which has expired
    • European Commission (2011) Commission Regulation (EU) No 619/2011 of 24 June 2011 laying down the methods of sampling and analysis for the official control of feed as regards presence of genetically modified material for which an authorisation procedure is pending or the authorisation of which has expired. Off J Eur Union L 166:9–15
    • (2011) Off J Eur Union L , vol.166 , pp. 9-15
  • 8
    • 77951296355 scopus 로고    scopus 로고
    • A practical approach to screen for authorised and unauthorised genetically modified plants
    • COI: 1:CAS:528:DC%2BD1MXhtlWnt7%2FJ
    • Waiblinger HU, Grohmann L, Mankertz J, Engelbert D, Pietsch K (2010) A practical approach to screen for authorised and unauthorised genetically modified plants. Anal Bioanal Chem 396(6):2065–2072
    • (2010) Anal Bioanal Chem , vol.396 , Issue.6 , pp. 2065-2072
    • Waiblinger, H.U.1    Grohmann, L.2    Mankertz, J.3    Engelbert, D.4    Pietsch, K.5
  • 11
    • 74049123942 scopus 로고    scopus 로고
    • The global pipeline of new GM crops: implications of asynchronous approval for international trade
    • Stein AJ, Rodriguez-Cerez E (2009) The global pipeline of new GM crops: implications of asynchronous approval for international trade. EU23846-EN
    • (2009) EU23846-EN
    • Stein, A.J.1    Rodriguez-Cerez, E.2
  • 12
    • 40949132598 scopus 로고    scopus 로고
    • Escape and establishment of transgenic glyphosate-resistant creeping bentgrass Agrostis stolonifera in Oregon, USA: a 4-year study
    • Zapiola ML, Campbell CK, Butler MD, Mallory-Smith CA (2008) Escape and establishment of transgenic glyphosate-resistant creeping bentgrass Agrostis stolonifera in Oregon, USA: a 4-year study. J Appl Ecol 45:486–494
    • (2008) J Appl Ecol , vol.45 , pp. 486-494
    • Zapiola, M.L.1    Campbell, C.K.2    Butler, M.D.3    Mallory-Smith, C.A.4
  • 14
    • 38949187855 scopus 로고    scopus 로고
    • Validation and collaborative study of a P35S and T-nos duplex real-time PCR screening method to detect genetically modified organisms in food products
    • COI: 1:CAS:528:DC%2BD1cXhs1Whurc%3D
    • Waiblinger HU, Ernst B, Anderson A, Pietsch K (2008) Validation and collaborative study of a P35S and T-nos duplex real-time PCR screening method to detect genetically modified organisms in food products. Eur Food Res Technol 226(5):1221–1228
    • (2008) Eur Food Res Technol , vol.226 , Issue.5 , pp. 1221-1228
    • Waiblinger, H.U.1    Ernst, B.2    Anderson, A.3    Pietsch, K.4
  • 15
    • 34250195786 scopus 로고    scopus 로고
    • Collaborative Study of a T-nos real-time PCR method for screening of genetically modified organisms in food products
    • COI: 1:CAS:528:DC%2BD2sXmvVKjsr8%3D
    • Reiting R, Broll H, Waiblinger H, Grohmann L (2007) Collaborative Study of a T-nos real-time PCR method for screening of genetically modified organisms in food products. Journal für Verbraucherschutz und Lebensmittelsicherheit 2(2):116–121
    • (2007) Journal für Verbraucherschutz und Lebensmittelsicherheit , vol.2 , Issue.2 , pp. 116-121
    • Reiting, R.1    Broll, H.2    Waiblinger, H.3    Grohmann, L.4
  • 17
    • 70349906741 scopus 로고    scopus 로고
    • Collaborative trial validation studies of real-time PCR-based GMO screening methods for detection of the bar gene and the ctp2-cp4epsps construct
    • COI: 1:CAS:528:DC%2BD1MXhtVOrs7vM
    • Grohmann L, Brunen-Nieweler C, Nemeth A, Waiblinger HU (2009) Collaborative trial validation studies of real-time PCR-based GMO screening methods for detection of the bar gene and the ctp2-cp4epsps construct. J Agric Food Chem 57(19):8913–8920
    • (2009) J Agric Food Chem , vol.57 , Issue.19 , pp. 8913-8920
    • Grohmann, L.1    Brunen-Nieweler, C.2    Nemeth, A.3    Waiblinger, H.U.4
  • 19
    • 67649135875 scopus 로고    scopus 로고
    • Development of a quadruplex real-time-PCR for screening food for genetically modified organisms
    • COI: 1:CAS:528:DC%2BD1MXmt1SjsLs%3D
    • Gaudron T, Peters C, Boland E, Steinmetz A, Moris G (2009) Development of a quadruplex real-time-PCR for screening food for genetically modified organisms. Eur Food Res Technol 229:295–305
    • (2009) Eur Food Res Technol , vol.229 , pp. 295-305
    • Gaudron, T.1    Peters, C.2    Boland, E.3    Steinmetz, A.4    Moris, G.5
  • 20
    • 77951296860 scopus 로고    scopus 로고
    • Development of a qualitative, multiplex real-time PCR kit for screening of genetically modified organisms (GMOs)
    • Dorries HH, Remus I, Gronewald A, Gronewald C, Berghof-Jager K (2010) Development of a qualitative, multiplex real-time PCR kit for screening of genetically modified organisms (GMOs). Anal Bioanal Chem 396(6):2043–2054
    • (2010) Anal Bioanal Chem , vol.396 , Issue.6 , pp. 2043-2054
    • Dorries, H.H.1    Remus, I.2    Gronewald, A.3    Gronewald, C.4    Berghof-Jager, K.5
  • 21
    • 84887113019 scopus 로고    scopus 로고
    • Development and validation of duplex, triplex, and pentaplex real-time PCR screening assays for the detection of genetically modified organisms in food and feed
    • COI: 1:CAS:528:DC%2BC3sXhtlakt7rI
    • Huber I, Block A, Sebah D, Debode F, Morisset D, Grohmann L, Berben G, Stebih D, Milavec M, Zel J, Busch U (2013) Development and validation of duplex, triplex, and pentaplex real-time PCR screening assays for the detection of genetically modified organisms in food and feed. J Agric Food Chem 61:10293–10301
    • (2013) J Agric Food Chem , vol.61 , pp. 10293-10301
    • Huber, I.1    Block, A.2    Sebah, D.3    Debode, F.4    Morisset, D.5    Grohmann, L.6    Berben, G.7    Stebih, D.8    Milavec, M.9    Zel, J.10    Busch, U.11
  • 23
    • 54549083437 scopus 로고    scopus 로고
    • NAIMA: target amplification strategy allowing quantitative on-chip detection of GMOs
    • Morisset D, Dobnik D, Hamels S, Zel J, Gruden K (2008) NAIMA: target amplification strategy allowing quantitative on-chip detection of GMOs. Nucleic Acids Res 36(18):e118
    • (2008) Nucleic Acids Res , vol.36 , Issue.18 , pp. 118
    • Morisset, D.1    Dobnik, D.2    Hamels, S.3    Zel, J.4    Gruden, K.5
  • 24
    • 77951298269 scopus 로고    scopus 로고
    • NAIMA as a solution for future GMO diagnostics challenges
    • COI: 1:CAS:528:DC%2BC3cXivFKktb0%3D
    • Dobnik D, Morisset D, Gruden K (2010) NAIMA as a solution for future GMO diagnostics challenges. Anal Bioanal Chem 396(6):2229–2233
    • (2010) Anal Bioanal Chem , vol.396 , Issue.6 , pp. 2229-2233
    • Dobnik, D.1    Morisset, D.2    Gruden, K.3
  • 25
    • 79952159591 scopus 로고    scopus 로고
    • MPIC: one high-throughput analytical method for multiple DNA targets
    • COI: 1:CAS:528:DC%2BC3MXhsVeksb0%3D
    • Guo J, Yang L, Liu X, Jiang L, Zhang D (2011) MPIC: one high-throughput analytical method for multiple DNA targets. Anal Chem 83:1579–1586
    • (2011) Anal Chem , vol.83 , pp. 1579-1586
    • Guo, J.1    Yang, L.2    Liu, X.3    Jiang, L.4    Zhang, D.5
  • 27
    • 84892715018 scopus 로고    scopus 로고
    • MACRO: a combined microchip-PCR and microarray system for high-throughput monitoring of genetically modified organisms
    • COI: 1:CAS:528:DC%2BC3sXhvFOntrzE
    • Shao N, Jiang S-M, Zhang M, Wang J, Guo S-J, Li Y, Jiang H-W, Liu C-X, Zhang D-B, Yang L-T, Tao S-C (2014) MACRO: a combined microchip-PCR and microarray system for high-throughput monitoring of genetically modified organisms. Anal Chem 86(2):1269–1276
    • (2014) Anal Chem , vol.86 , Issue.2 , pp. 1269-1276
    • Shao, N.1    Jiang, S.-M.2    Zhang, M.3    Wang, J.4    Guo, S.-J.5    Li, Y.6    Jiang, H.-W.7    Liu, C.-X.8    Zhang, D.-B.9    Yang, L.-T.10    Tao, S.-C.11
  • 28
    • 84877062339 scopus 로고    scopus 로고
    • Quantitative analysis of food and feed samples with droplet digital PCR
    • COI: 1:CAS:528:DC%2BC3sXnsFWqur8%3D
    • Morisset D, Stebih D, Milavec M, Gruden K, Zel J (2013) Quantitative analysis of food and feed samples with droplet digital PCR. PLoS One 8(5):e62583
    • (2013) PLoS One , vol.8 , Issue.5 , pp. 62583
    • Morisset, D.1    Stebih, D.2    Milavec, M.3    Gruden, K.4    Zel, J.5
  • 29
    • 77953689713 scopus 로고    scopus 로고
    • The application of digital PCR for the assessment of detection limits in GMO analysis
    • COI: 1:CAS:528:DC%2BC3cXntlGhsbw%3D
    • Burns MJ, Burrell AM, Foy CA (2010) The application of digital PCR for the assessment of detection limits in GMO analysis. Eur Food Res Technol 231:353–362
    • (2010) Eur Food Res Technol , vol.231 , pp. 353-362
    • Burns, M.J.1    Burrell, A.M.2    Foy, C.A.3
  • 31
    • 84885112397 scopus 로고    scopus 로고
    • Characterization of GM events by insert knowledge adapted re-sequencing approaches
    • Yang L, Wang C, Holst-Jensen A, Morisset D, Lin Y, Zhan D (2013) Characterization of GM events by insert knowledge adapted re-sequencing approaches. Sci Rep 3:2839–2847
    • (2013) Sci Rep , vol.3 , pp. 2839-2847
    • Yang, L.1    Wang, C.2    Holst-Jensen, A.3    Morisset, D.4    Lin, Y.5    Zhan, D.6
  • 32
    • 84887320262 scopus 로고    scopus 로고
    • Next-generation sequencing as a tool for detailed molecular characterisation of genomic insertions and flanking regions in genetically modified plants: a pilot study using a rice event unauthorised in the EU
    • Wahler D, Schauser L, Bendiek J, Grohmann L (2013) Next-generation sequencing as a tool for detailed molecular characterisation of genomic insertions and flanking regions in genetically modified plants: a pilot study using a rice event unauthorised in the EU. Food Anal Methods 6:1718–1727
    • (2013) Food Anal Methods , vol.6 , pp. 1718-1727
    • Wahler, D.1    Schauser, L.2    Bendiek, J.3    Grohmann, L.4
  • 34
    • 79952008363 scopus 로고    scopus 로고
    • SYBR®Green qPCR methods for detection of endogenous reference genes in commodity crops: a step ahead in combinatory screening of genetically modified crops in food and feed products
    • COI: 1:CAS:528:DC%2BC3MXit1Ggtrk%3D
    • Mbongolo Mbella EG, Lievens A, Barbau-Piednoir E, Sneyers M, Leunda-Casi A, Roosens N, Van den Bulcke M (2011) SYBR®Green qPCR methods for detection of endogenous reference genes in commodity crops: a step ahead in combinatory screening of genetically modified crops in food and feed products. Eur Food Res Technol 232(3):485–496
    • (2011) Eur Food Res Technol , vol.232 , Issue.3 , pp. 485-496
    • Mbongolo Mbella, E.G.1    Lievens, A.2    Barbau-Piednoir, E.3    Sneyers, M.4    Leunda-Casi, A.5    Roosens, N.6    Van den Bulcke, M.7
  • 35
    • 84874021984 scopus 로고    scopus 로고
    • New SYBRGreen methods targeting promoter sequences used for screening of several GM events pending for authorisation in Europe
    • COI: 1:CAS:528:DC%2BC3sXisVOjsbg%3D
    • Broeders S, Barbau-Piednoir E, Vandermassen E, Debode F, Mazzara M, Roosens N (2013) New SYBRGreen methods targeting promoter sequences used for screening of several GM events pending for authorisation in Europe. Eur Food Res Technol 236:537–547
    • (2013) Eur Food Res Technol , vol.236 , pp. 537-547
    • Broeders, S.1    Barbau-Piednoir, E.2    Vandermassen, E.3    Debode, F.4    Mazzara, M.5    Roosens, N.6
  • 36
    • 84885491762 scopus 로고    scopus 로고
    • An innovative and integrated approach based on DNA walking to identify unauthorised GMOs
    • COI: 1:CAS:528:DC%2BC3sXhsleqsLfM
    • Fraiture M-A, Herman P, Taverniers I, De Loose M, Deforce D, Roosens NH (2014) An innovative and integrated approach based on DNA walking to identify unauthorised GMOs. Food Chem 147:60–69
    • (2014) Food Chem , vol.147 , pp. 60-69
    • Fraiture, M.-A.1    Herman, P.2    Taverniers, I.3    De Loose, M.4    Deforce, D.5    Roosens, N.H.6
  • 37
    • 0033990048 scopus 로고    scopus 로고
    • Primer 3 on the WWW for general users and for biologist programmers
    • COI: 1:CAS:528:DyaK1MXmslKqsbo%3D
    • Rozen S, Skaletsky H (2000) Primer 3 on the WWW for general users and for biologist programmers. Methods Mol Biol 132:365–386
    • (2000) Methods Mol Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 38
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • COI: 1:CAS:528:DC%2BD3cXjvVygsbs%3D
    • Rice P, Longden I, Bleasby A (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16(6):276–277
    • (2000) Trends Genet , vol.16 , Issue.6 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 39
    • 14644395503 scopus 로고    scopus 로고
    • wEMBOSS: a web interface for EMBOSS
    • COI: 1:CAS:528:DC%2BD2MXhsFSgur8%3D
    • Sarachu M, Colet M (2005) wEMBOSS: a web interface for EMBOSS. Bioinformatics 21(4):540–541
    • (2005) Bioinformatics , vol.21 , Issue.4 , pp. 540-541
    • Sarachu, M.1    Colet, M.2
  • 42
    • 84870515911 scopus 로고    scopus 로고
    • Development of a molecular platform for GMO detection in food and feed on the basis of “combinatory qPCR” technology
    • Hernández-Rodríguez Patricia, Gomez Arlen Patricia Ramirez, (eds), InTech, Rijeka, Croatia
    • Broeders S, Papazova N, Van den Bulcke M, Roosens N (2012) Development of a molecular platform for GMO detection in food and feed on the basis of “combinatory qPCR” technology. In: Hernández-Rodríguez Patricia, Gomez Arlen Patricia Ramirez (eds) Polymerase chain reaction, 1st edn. InTech, Rijeka, Croatia, pp 363–404
    • (2012) Polymerase chain reaction , pp. 363-404
    • Broeders, S.1    Papazova, N.2    Van den Bulcke, M.3    Roosens, N.4
  • 43
    • 51249171246 scopus 로고
    • Nuclear DNA content of some important plant species
    • COI: 1:CAS:528:DyaK38XhslSjurY%3D
    • Arumuganathan K, Earle E (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9(3):208–218
    • (1991) Plant Mol Biol Rep , vol.9 , Issue.3 , pp. 208-218
    • Arumuganathan, K.1    Earle, E.2
  • 46
    • 84937865136 scopus 로고    scopus 로고
    • Critères de validation intra-laboratoire pour les méthodes de détection et quantification de séquences d’acides nucléiques spécifiques
    • Association Française de Normalisation (AFNOR) (2008) Critères de validation intra-laboratoire pour les méthodes de détection et quantification de séquences d’acides nucléiques spécifiques. (XP V03-044)
    • (2008) (XP V03-044)
  • 48
    • 84937899887 scopus 로고    scopus 로고
    • European Network of GMO Laboratories (ENGL) (2008) Definition of minimum performance requirements for analytical methods of GMO testing
    • European Network of GMO Laboratories (ENGL) (2008) Definition of minimum performance requirements for analytical methods of GMO testing. http://gmo-crl.jrc.ec.europa.eu/doc/Min_Perf_Requirements_Analytical_methods.pdf
  • 50
    • 84885937363 scopus 로고    scopus 로고
    • Development and validation of qualitative SYBRGreen real-time PCR for detection and discrimination of Listeria spp. and Listeria monocytogenes
    • COI: 1:CAS:528:DC%2BC3sXlvV2htro%3D
    • Barbau-Piednoir E, Botteldoorn N, Yde M, Mahillon J, Roosens NH (2013) Development and validation of qualitative SYBRGreen real-time PCR for detection and discrimination of Listeria spp. and Listeria monocytogenes. Appl Microbiol Biot 97:4021–4037
    • (2013) Appl Microbiol Biot , vol.97 , pp. 4021-4037
    • Barbau-Piednoir, E.1    Botteldoorn, N.2    Yde, M.3    Mahillon, J.4    Roosens, N.H.5
  • 51
    • 84888421646 scopus 로고    scopus 로고
    • SYBRGreen qPCR Salmonella detection system allowing discrimination at the genus, species and subspecies levels
    • COI: 1:CAS:528:DC%2BC3sXhs1Srs7vK
    • Barbau-Piednoir E, Bertrand S, Mahillon J, Roosens NH, Botteldoorn N (2013) SYBRGreen qPCR Salmonella detection system allowing discrimination at the genus, species and subspecies levels. Appl Microbiol Biotechnol 97(22):9811–9824
    • (2013) Appl Microbiol Biotechnol , vol.97 , Issue.22 , pp. 9811-9824
    • Barbau-Piednoir, E.1    Bertrand, S.2    Mahillon, J.3    Roosens, N.H.4    Botteldoorn, N.5
  • 53
    • 78549282173 scopus 로고    scopus 로고
    • Development of detection system using multiplex PCR and liquid beadarray for stacked genetically modified rice event (LS28xCry1Ac)
    • COI: 1:CAS:528:DC%2BC3cXhs1Smt7jO
    • Choi SH, Oh YT, Kwon JY, Lee SN, Han BD, Yu KH (2010) Development of detection system using multiplex PCR and liquid beadarray for stacked genetically modified rice event (LS28xCry1Ac). J Korean Soc Appl Biol Chem 53(3):639–646
    • (2010) J Korean Soc Appl Biol Chem , vol.53 , Issue.3 , pp. 639-646
    • Choi, S.H.1    Oh, Y.T.2    Kwon, J.Y.3    Lee, S.N.4    Han, B.D.5    Yu, K.H.6
  • 54
    • 79960556628 scopus 로고    scopus 로고
    • Hexaplex PCR assay and liquid bead array for detection of stacked genetically modified cotton event 281–24-2363006–210-23
    • COI: 1:CAS:528:DC%2BC3MXmslentLg%3D
    • Choi SH (2011) Hexaplex PCR assay and liquid bead array for detection of stacked genetically modified cotton event 281–24-2363006–210-23. Anal Bioanal Chem 401:647–655
    • (2011) Anal Bioanal Chem , vol.401 , pp. 647-655
    • Choi, S.H.1
  • 56
    • 84889825893 scopus 로고    scopus 로고
    • Flanking sequence determination and specific PCR identification of transgenic wheat B102-1-2
    • COI: 1:CAS:528:DC%2BC3sXps1yqurk%3D
    • Cao J, Xu J, Zhao T, Cao D, Huang X, Zhang P, Luan F (2014) Flanking sequence determination and specific PCR identification of transgenic wheat B102-1-2. Prep Biochem Biotechnol 44(3):257–265
    • (2014) Prep Biochem Biotechnol , vol.44 , Issue.3 , pp. 257-265
    • Cao, J.1    Xu, J.2    Zhao, T.3    Cao, D.4    Huang, X.5    Zhang, P.6    Luan, F.7
  • 57
    • 84875051005 scopus 로고    scopus 로고
    • LT-RADE: an efficient user-friendly genome walking method applied to the molecular characterization of the insertion site of genetically modified maize MON810 and rice LLRICE62
    • Spalinskas R, Van den Bulcke M, Van den Eede G, Milcamps A (2013) LT-RADE: an efficient user-friendly genome walking method applied to the molecular characterization of the insertion site of genetically modified maize MON810 and rice LLRICE62. Food Anal Method 6:705–713
    • (2013) Food Anal Method , vol.6 , pp. 705-713
    • Spalinskas, R.1    Van den Bulcke, M.2    Van den Eede, G.3    Milcamps, A.4


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