-
1
-
-
14744277777
-
Polyploidy and genome evolution in plants
-
COI: 1:CAS:528:DC%2BD2MXitVCntLY%3D, PID: 15752992
-
Adams KL, Wendel JF (2005) Polyploidy and genome evolution in plants. Curr Opin Plant Biol 8:135–141
-
(2005)
Curr Opin Plant Biol
, vol.8
, pp. 135-141
-
-
Adams, K.L.1
Wendel, J.F.2
-
3
-
-
36349019218
-
Chromosomal rearrangements in wheat: their types and distribution
-
COI: 1:CAS:528:DC%2BD2sXhsVWktbbF, PID: 18059554
-
Badaeva ED, Dedkova OS, Gay G, Pukhalskyi VA, Zelenin AV, Bernard S, Bernard M (2007) Chromosomal rearrangements in wheat: their types and distribution. Genome 50:907–926
-
(2007)
Genome
, vol.50
, pp. 907-926
-
-
Badaeva, E.D.1
Dedkova, O.S.2
Gay, G.3
Pukhalskyi, V.A.4
Zelenin, A.V.5
Bernard, S.6
Bernard, M.7
-
4
-
-
79953789287
-
Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant
-
COI: 1:CAS:528:DC%2BC3MXksFyntr4%3D, PID: 21419627
-
Buggs RJ, Zhang L, Miles N, Tate JA, Gao L, Wei W, Schnable PS, Barbazuk WB, Soltis PS, Soltis DE (2011) Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant. Curr Biol 21:551–556
-
(2011)
Curr Biol
, vol.21
, pp. 551-556
-
-
Buggs, R.J.1
Zhang, L.2
Miles, N.3
Tate, J.A.4
Gao, L.5
Wei, W.6
Schnable, P.S.7
Barbazuk, W.B.8
Soltis, P.S.9
Soltis, D.E.10
-
5
-
-
77955727160
-
Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids
-
PID: 20591055
-
Chagué V, Just J, Mestiri I, Balzergue S, Tanguy AM, Huneau C, Huteau V, Belcram H, Coriton O, Jahier J (2010) Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids. New Phytol 187:1181–1194
-
(2010)
New Phytol
, vol.187
, pp. 1181-1194
-
-
Chagué, V.1
Just, J.2
Mestiri, I.3
Balzergue, S.4
Tanguy, A.M.5
Huneau, C.6
Huteau, V.7
Belcram, H.8
Coriton, O.9
Jahier, J.10
-
6
-
-
84906689347
-
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
-
COI: 1:CAS:528:DC%2BC2cXhtlOmsr%2FK, PID: 25146293
-
Chalhoub B, Denoeud F, Liu S, Parkin IA, Tang H, Wang X, Chiquet J, Belcram H, Tong C, Samans B (2014) Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome. Science 345:950–953
-
(2014)
Science
, vol.345
, pp. 950-953
-
-
Chalhoub, B.1
Denoeud, F.2
Liu, S.3
Parkin, I.A.4
Tang, H.5
Wang, X.6
Chiquet, J.7
Belcram, H.8
Tong, C.9
Samans, B.10
-
7
-
-
33645389485
-
Mechanisms of genomic rearrangements and gene expression changes in plant polyploids
-
PID: 16479580
-
Chen ZJ, Ni Z (2006) Mechanisms of genomic rearrangements and gene expression changes in plant polyploids. BioEssays 28:240–252
-
(2006)
BioEssays
, vol.28
, pp. 240-252
-
-
Chen, Z.J.1
Ni, Z.2
-
8
-
-
33644681986
-
The advantages and disadvantages of being polyploid
-
COI: 1:CAS:528:DC%2BD2MXhtFygt7%2FO, PID: 16304599
-
Comai L (2005) The advantages and disadvantages of being polyploid. Nat Rev Genet 6:836–846
-
(2005)
Nat Rev Genet
, vol.6
, pp. 836-846
-
-
Comai, L.1
-
9
-
-
84893415366
-
Epigenetics and plant genome evolution
-
COI: 1:CAS:528:DC%2BC2cXmvV2gtLY%3D, PID: 24424204
-
Diez CM, Roessler K, Gaut BS (2014) Epigenetics and plant genome evolution. Curr Opin Plant Biol 18:1–8
-
(2014)
Curr Opin Plant Biol
, vol.18
, pp. 1-8
-
-
Diez, C.M.1
Roessler, K.2
Gaut, B.S.3
-
10
-
-
33745482934
-
Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb
-
COI: 1:CAS:528:DC%2BD28XmtFSit70%3D, PID: 16791687
-
Dong Z, Wang Y, Zhang Z, Shen Y, Lin X, Ou X, Han F, Liu B (2006) Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb. Theor Appl Genet 113:196–205
-
(2006)
Theor Appl Genet
, vol.113
, pp. 196-205
-
-
Dong, Z.1
Wang, Y.2
Zhang, Z.3
Shen, Y.4
Lin, X.5
Ou, X.6
Han, F.7
Liu, B.8
-
11
-
-
57749100022
-
Evolutionary genetics of genome merger and doubling in plants
-
COI: 1:CAS:528:DC%2BD1cXhsFemtbrE, PID: 18983261
-
Doyle JJ, Flagel LE, Paterson AH, Rapp RA, Soltis DE, Soltis PS, Wendel JF (2008) Evolutionary genetics of genome merger and doubling in plants. Annu Rev Genet 42:443–461
-
(2008)
Annu Rev Genet
, vol.42
, pp. 443-461
-
-
Doyle, J.J.1
Flagel, L.E.2
Paterson, A.H.3
Rapp, R.A.4
Soltis, D.E.5
Soltis, P.S.6
Wendel, J.F.7
-
12
-
-
34347399464
-
Genome plasticity a key factor in the success of polyploid wheat under domestication
-
COI: 1:CAS:528:DC%2BD2sXmvV2mu7k%3D, PID: 17600208
-
Dubcovsky J, Dvorak J (2007) Genome plasticity a key factor in the success of polyploid wheat under domestication. Science 316:1862–1866
-
(2007)
Science
, vol.316
, pp. 1862-1866
-
-
Dubcovsky, J.1
Dvorak, J.2
-
13
-
-
0017097498
-
The relationship between the genome of Triticum urartu and the A and B genomes of Triticum aestivum
-
Dvořák J (1976) The relationship between the genome of Triticum urartu and the A and B genomes of Triticum aestivum. Can J Genet Cytol 18:371–377
-
(1976)
Can J Genet Cytol
, vol.18
, pp. 371-377
-
-
Dvořák, J.1
-
14
-
-
26444545621
-
Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops–Triticum alliance
-
COI: 1:CAS:528:DC%2BD2MXhtFGqt7nM, PID: 15996988
-
Dvorak J, Akhunov ED (2005) Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops–Triticum alliance. Genetics 171:323–332
-
(2005)
Genetics
, vol.171
, pp. 323-332
-
-
Dvorak, J.1
Akhunov, E.D.2
-
15
-
-
0026681074
-
Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
-
COI: 1:CAS:528:DyaK38XlsVCntro%3D, PID: 1644282
-
Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479–491
-
(1992)
Genetics
, vol.131
, pp. 479-491
-
-
Excoffier, L.1
Smouse, P.E.2
Quattro, J.M.3
-
17
-
-
84869028379
-
Genome evolution due to allopolyploidization in wheat
-
COI: 1:CAS:528:DC%2BC3sXjslSiurc%3D, PID: 23135324
-
Feldman M, Levy AA (2012) Genome evolution due to allopolyploidization in wheat. Genetics 192:763–774
-
(2012)
Genetics
, vol.192
, pp. 763-774
-
-
Feldman, M.1
Levy, A.A.2
-
18
-
-
0030671532
-
Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes
-
COI: 1:CAS:528:DyaK2sXntlOjsr4%3D, PID: 9383078
-
Feldman M, Liu B, Segal G, Abbo S, Levy AA, Vega JM (1997) Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes. Genetics 147:1381–1387
-
(1997)
Genetics
, vol.147
, pp. 1381-1387
-
-
Feldman, M.1
Liu, B.2
Segal, G.3
Abbo, S.4
Levy, A.A.5
Vega, J.M.6
-
19
-
-
84865772155
-
Genomic asymmetry in allopolyploid plants: wheat as a model
-
COI: 1:CAS:528:DC%2BC38Xht1ygsr3L, PID: 22859676
-
Feldman M, Levy AA, Fahima T, Korol A (2012) Genomic asymmetry in allopolyploid plants: wheat as a model. J Exp Bot 63:5045–5059
-
(2012)
J Exp Bot
, vol.63
, pp. 5045-5059
-
-
Feldman, M.1
Levy, A.A.2
Fahima, T.3
Korol, A.4
-
20
-
-
84863490293
-
Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton
-
COI: 1:CAS:528:DC%2BC38XhslehsL%2FK
-
Flagel LE, Wendel JF, Udall JA (2012) Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton. BMC Gen 13:302
-
(2012)
BMC Gen
, vol.13
, pp. 302
-
-
Flagel, L.E.1
Wendel, J.F.2
Udall, J.A.3
-
21
-
-
37849034684
-
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype
-
COI: 1:CAS:528:DC%2BD1cXns1entA%3D%3D, PID: 18024568
-
Gaeta RT, Pires JC, Iniguez-Luy F, Leon E, Osborn TC (2007) Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype. Plant Cell 19:3403–3417
-
(2007)
Plant Cell
, vol.19
, pp. 3403-3417
-
-
Gaeta, R.T.1
Pires, J.C.2
Iniguez-Luy, F.3
Leon, E.4
Osborn, T.C.5
-
22
-
-
84907991160
-
The chloroplast view of the evolution of polyploid wheat
-
COI: 1:CAS:528:DC%2BC2cXhslOjs7vK, PID: 25059383
-
Gornicki P, Zhu H, Wang J, Challa GS, Zhang Z, Gill BS, Li W (2014) The chloroplast view of the evolution of polyploid wheat. New Phytol 204:704–714
-
(2014)
New Phytol
, vol.204
, pp. 704-714
-
-
Gornicki, P.1
Zhu, H.2
Wang, J.3
Challa, G.S.4
Zhang, Z.5
Gill, B.S.6
Li, W.7
-
23
-
-
84868595333
-
Homoeolog expression bias and expression level dominance in allopolyploids
-
COI: 1:CAS:528:DC%2BC38Xhs1Wjur%2FJ, PID: 23033870
-
Grover C, Gallagher J, Szadkowski E, Yoo M, Flagel L, Wendel J (2012) Homoeolog expression bias and expression level dominance in allopolyploids. New Phytol 196:966–971
-
(2012)
New Phytol
, vol.196
, pp. 966-971
-
-
Grover, C.1
Gallagher, J.2
Szadkowski, E.3
Yoo, M.4
Flagel, L.5
Wendel, J.6
-
24
-
-
5344225606
-
Genomic constitution and variation in five partial amphiploids of wheat–Thinopyrum intermedium as revealed by GISH, multicolor GISH and seed storage protein analysis
-
COI: 1:CAS:528:DC%2BD2cXotlKqt7c%3D, PID: 15197444
-
Han F, Liu B, Fedak G, Liu Z (2004) Genomic constitution and variation in five partial amphiploids of wheat–Thinopyrum intermedium as revealed by GISH, multicolor GISH and seed storage protein analysis. Theor Appl Genet 109:1070–1076
-
(2004)
Theor Appl Genet
, vol.109
, pp. 1070-1076
-
-
Han, F.1
Liu, B.2
Fedak, G.3
Liu, Z.4
-
25
-
-
23344449410
-
Rapid and repeatable elimination of a parental genome-specific DNA repeat (pGc1R-1a) in newly synthesized wheat allopolyploids
-
COI: 1:CAS:528:DC%2BD2MXps1KhsL0%3D, PID: 15911583
-
Han F, Fedak G, Guo W, Liu B (2005) Rapid and repeatable elimination of a parental genome-specific DNA repeat (pGc1R-1a) in newly synthesized wheat allopolyploids. Genetics 170:1239–1245
-
(2005)
Genetics
, vol.170
, pp. 1239-1245
-
-
Han, F.1
Fedak, G.2
Guo, W.3
Liu, B.4
-
26
-
-
33747161960
-
Transcriptome shock after interspecific hybridization in senecio is ameliorated by genome duplication
-
COI: 1:CAS:528:DC%2BD28XosVOhtrs%3D, PID: 16920628
-
Hegarty MJ, Barker GL, Wilson ID, Abbott RJ, Edwards KJ, Hiscock SJ (2006) Transcriptome shock after interspecific hybridization in senecio is ameliorated by genome duplication. Curr Biol 16:1652–1659
-
(2006)
Curr Biol
, vol.16
, pp. 1652-1659
-
-
Hegarty, M.J.1
Barker, G.L.2
Wilson, I.D.3
Abbott, R.J.4
Edwards, K.J.5
Hiscock, S.J.6
-
27
-
-
0032742483
-
Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes
-
COI: 1:CAS:528:DyaK1MXhtVGrsLg%3D, PID: 9878630
-
Heslop-Harrison JS, Murata M, Ogura Y, Schwarzacher T, Motoyoshi F (1999) Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes. Plant Cell 11:31–42
-
(1999)
Plant Cell
, vol.11
, pp. 31-42
-
-
Heslop-Harrison, J.S.1
Murata, M.2
Ogura, Y.3
Schwarzacher, T.4
Motoyoshi, F.5
-
28
-
-
84873265905
-
Epigenetic modification contributes to the expression divergence of three TaEXPA1 homoeologs in hexaploid wheat (Triticum aestivum)
-
COI: 1:CAS:528:DC%2BC3sXitVOju74%3D, PID: 23360546
-
Hu Z, Han Z, Song N, Chai L, Yao Y, Peng H, Ni Z, Sun Q (2013) Epigenetic modification contributes to the expression divergence of three TaEXPA1 homoeologs in hexaploid wheat (Triticum aestivum). New Phytol 197:1344–1352
-
(2013)
New Phytol
, vol.197
, pp. 1344-1352
-
-
Hu, Z.1
Han, Z.2
Song, N.3
Chai, L.4
Yao, Y.5
Peng, H.6
Ni, Z.7
Sun, Q.8
-
29
-
-
0037062465
-
Genes encoding plastid acetyl-CoA carboxylase and 3-phosphoglycerate kinase of the Triticum/Aegilops complex and the evolutionary history of polyploid wheat
-
COI: 1:CAS:528:DC%2BD38XkvVGju78%3D, PID: 12060759
-
Huang S, Sirikhachornkit A, Su X, Faris J, Gill B, Haselkorn R, Gornicki P (2002) Genes encoding plastid acetyl-CoA carboxylase and 3-phosphoglycerate kinase of the Triticum/Aegilops complex and the evolutionary history of polyploid wheat. Proc Natl Acad Sci USA 99:8133–8138
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 8133-8138
-
-
Huang, S.1
Sirikhachornkit, A.2
Su, X.3
Faris, J.4
Gill, B.5
Haselkorn, R.6
Gornicki, P.7
-
30
-
-
77951171017
-
Genomic and expression plasticity of polyploidy
-
COI: 1:CAS:528:DC%2BC3cXlsFahsrY%3D, PID: 20031477
-
Jackson S, Chen ZJ (2010) Genomic and expression plasticity of polyploidy. Curr Opin Plant Biol 13:153–159
-
(2010)
Curr Opin Plant Biol
, vol.13
, pp. 153-159
-
-
Jackson, S.1
Chen, Z.J.2
-
31
-
-
79955630390
-
Ancestral polyploidy in seed plants and angiosperms
-
COI: 1:CAS:528:DC%2BC3MXksFWnsb4%3D, PID: 21478875
-
Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS (2011) Ancestral polyploidy in seed plants and angiosperms. Nature 473:97–100
-
(2011)
Nature
, vol.473
, pp. 97-100
-
-
Jiao, Y.1
Wickett, N.J.2
Ayyampalayam, S.3
Chanderbali, A.S.4
Landherr, L.5
Ralph, P.E.6
Tomsho, L.P.7
Hu, Y.8
Liang, H.9
Soltis, P.S.10
-
32
-
-
79958231735
-
Wheat hybridization and polyploidization results in deregulation of small RNAs
-
COI: 1:CAS:528:DC%2BC3MXhtVGqtb7E, PID: 21467573
-
Kenan-Eichler M, Leshkowitz D, Tal L, Noor E, Melamed-Bessudo C, Feldman M, Levy AA (2011) Wheat hybridization and polyploidization results in deregulation of small RNAs. Genetics 188:263–272
-
(2011)
Genetics
, vol.188
, pp. 263-272
-
-
Kenan-Eichler, M.1
Leshkowitz, D.2
Tal, L.3
Noor, E.4
Melamed-Bessudo, C.5
Feldman, M.6
Levy, A.A.7
-
33
-
-
0001227381
-
Wheat: reconstitution of the tetraploid component (AABB) of hexaploids
-
COI: 1:STN:280:DC%2BC3cvgt1Oisg%3D%3D, PID: 17753152
-
Kerber E (1964) Wheat: reconstitution of the tetraploid component (AABB) of hexaploids. Science 143:253–255
-
(1964)
Science
, vol.143
, pp. 253-255
-
-
Kerber, E.1
-
34
-
-
78951489213
-
Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat
-
COI: 1:CAS:528:DC%2BC3cXhsFOnt7jF, PID: 20823338
-
Kraitshtein Z, Yaakov B, Khasdan V, Kashkush K (2010) Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat. Genetics 186:801–812
-
(2010)
Genetics
, vol.186
, pp. 801-812
-
-
Kraitshtein, Z.1
Yaakov, B.2
Khasdan, V.3
Kashkush, K.4
-
35
-
-
84903618373
-
mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat
-
COI: 1:CAS:528:DC%2BC2cXhtFOhtrzI, PID: 24838975
-
Li A, Liu D, Wu J, Zhao X, Hao M, Geng S, Yan J, Jiang X, Zhang L, Wu J (2014) mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat. Plant Cell 26:1878–1900
-
(2014)
Plant Cell
, vol.26
, pp. 1878-1900
-
-
Li, A.1
Liu, D.2
Wu, J.3
Zhao, X.4
Hao, M.5
Geng, S.6
Yan, J.7
Jiang, X.8
Zhang, L.9
Wu, J.10
-
36
-
-
0031872639
-
Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. I. Changes in low-copy noncoding DNA sequences
-
COI: 1:CAS:528:DyaK1cXksVSmtLc%3D
-
Liu B, Vega J, Feldman M (1998a) Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. I. Changes in low-copy noncoding DNA sequences. Genome 41:272–277
-
(1998)
Genome
, vol.41
, pp. 272-277
-
-
Liu, B.1
Vega, J.2
Feldman, M.3
-
37
-
-
0032144727
-
Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. II. Changes in low-copy coding DNA sequences
-
COI: 1:CAS:528:DyaK1cXntlWksrs%3D, PID: 9796102
-
Liu B, Vega J, Feldman M (1998b) Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. II. Changes in low-copy coding DNA sequences. Genome 41:535–542
-
(1998)
Genome
, vol.41
, pp. 535-542
-
-
Liu, B.1
Vega, J.2
Feldman, M.3
-
38
-
-
33645832572
-
Patterns of sequence loss and cytosine methylation within a population of newly resynthesized Brassica napus allopolyploids
-
COI: 1:CAS:528:DC%2BD28XhtVCgtrc%3D, PID: 16377753
-
Lukens LN, Pires JC, Leon E, Vogelzang R, Oslach L, Osborn T (2006) Patterns of sequence loss and cytosine methylation within a population of newly resynthesized Brassica napus allopolyploids. Plant Physiol 140:336–348
-
(2006)
Plant Physiol
, vol.140
, pp. 336-348
-
-
Lukens, L.N.1
Pires, J.C.2
Leon, E.3
Vogelzang, R.4
Oslach, L.5
Osborn, T.6
-
39
-
-
84881177437
-
Genetic and epigenetic aspects of polyploid evolution in plants
-
COI: 1:STN:280:DC%2BC3sjhtFyiuw%3D%3D, PID: 23751292
-
Madlung A, Wendel J (2013) Genetic and epigenetic aspects of polyploid evolution in plants. Cytogenet Genome Res 140:270–285
-
(2013)
Cytogenet Genome Res
, vol.140
, pp. 270-285
-
-
Madlung, A.1
Wendel, J.2
-
40
-
-
0035984262
-
Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids
-
COI: 1:CAS:528:DC%2BD38XkvV2jt7w%3D, PID: 12068115
-
Madlung A, Masuelli RW, Watson B, Reynolds SH, Davison J, Comai L (2002) Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiol 129:733–746
-
(2002)
Plant Physiol
, vol.129
, pp. 733-746
-
-
Madlung, A.1
Masuelli, R.W.2
Watson, B.3
Reynolds, S.H.4
Davison, J.5
Comai, L.6
-
41
-
-
79956129888
-
Evolution of polyploid Triticum wheats under cultivation: the role of domestication, natural hybridization and allopolyploid speciation in their diversification
-
COI: 1:CAS:528:DC%2BC3MXmtFynu78%3D, PID: 21317146
-
Matsuoka Y (2011) Evolution of polyploid Triticum wheats under cultivation: the role of domestication, natural hybridization and allopolyploid speciation in their diversification. Plant Cell Physiol 52:750–764
-
(2011)
Plant Cell Physiol
, vol.52
, pp. 750-764
-
-
Matsuoka, Y.1
-
42
-
-
79955109232
-
Epigenetic regulation of flowering time in polyploids
-
COI: 1:CAS:528:DC%2BC3MXltFyrsbg%3D, PID: 21470900
-
Mayfield D, Chen ZJ, Pires JC (2011) Epigenetic regulation of flowering time in polyploids. Curr Opin Plant Biol 14:174–178
-
(2011)
Curr Opin Plant Biol
, vol.14
, pp. 174-178
-
-
Mayfield, D.1
Chen, Z.J.2
Pires, J.C.3
-
43
-
-
0028060576
-
Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases
-
COI: 1:CAS:528:DyaK2cXmslejurk%3D
-
McClelland M, Nelson M, Raschke E (1994) Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases. Nucl Acid Res 22:3640–3659
-
(1994)
Nucl Acid Res
, vol.22
, pp. 3640-3659
-
-
McClelland, M.1
Nelson, M.2
Raschke, E.3
-
44
-
-
0021715393
-
The significance of responses of the genome to challenge
-
COI: 1:STN:280:DC%2BD2M7gvV2juw%3D%3D, PID: 15739260
-
McClintock B (1984) The significance of responses of the genome to challenge. Science 226:792–801
-
(1984)
Science
, vol.226
, pp. 792-801
-
-
McClintock, B.1
-
45
-
-
84892791391
-
Crop plants as models for understanding plant adaptation and diversification
-
Olsen KM, Wendel JF (2013) Crop plants as models for understanding plant adaptation and diversification. Front Plant Sci 4: art no 290
-
(2013)
Front Plant Sci 4: art no
, pp. 290
-
-
Olsen, K.M.1
Wendel, J.F.2
-
46
-
-
0034860131
-
Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops–Triticum) group
-
COI: 1:CAS:528:DC%2BD3MXmsFKiurg%3D, PID: 11487689
-
Ozkan H, Levy AA, Feldman M (2001) Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops–Triticum) group. Plant Cell 13:1735–1747
-
(2001)
Plant Cell
, vol.13
, pp. 1735-1747
-
-
Ozkan, H.1
Levy, A.A.2
Feldman, M.3
-
47
-
-
70449341719
-
Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina
-
COI: 1:CAS:528:DC%2BD1MXhsFOls73P, PID: 19780987
-
Parisod C, Salmon A, Zerjal T, Tenaillon M, Grandbastien MA, Ainouche M (2009) Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina. New Phytol 184:1003–1015
-
(2009)
New Phytol
, vol.184
, pp. 1003-1015
-
-
Parisod, C.1
Salmon, A.2
Zerjal, T.3
Tenaillon, M.4
Grandbastien, M.A.5
Ainouche, M.6
-
48
-
-
79955124907
-
Altered gene expression and ecological divergence in sibling allopolyploids of Dactylorhiza (Orchidaceae)
-
Paun O, Bateman RM, Fay MF, Luna JA, Moat J, Hedrén M, Chase MW (2011) Altered gene expression and ecological divergence in sibling allopolyploids of Dactylorhiza (Orchidaceae). BMC Evol Biol 11: art no 113
-
(2011)
BMC Evol Biol 11: art no
, pp. 113
-
-
Paun, O.1
Bateman, R.M.2
Fay, M.F.3
Luna, J.A.4
Moat, J.5
Hedrén, M.6
Chase, M.W.7
-
49
-
-
84876326161
-
msap: a tool for the statistical analysis of methylation-sensitive amplified polymorphism data
-
Pérez-Figueroa A (2013) msap: a tool for the statistical analysis of methylation-sensitive amplified polymorphism data. Mol Ecol Res 13:522–527
-
(2013)
Mol Ecol Res
, vol.13
, pp. 522-527
-
-
Pérez-Figueroa, A.1
-
50
-
-
85048671720
-
Genome interplay in the grain transcriptome of hexaploid bread wheat
-
PID: 25035498
-
Pfeifer M, Kugler KG, Sandve SR, Zhan B, Rudi H, Hvidsten TR, Mayer KF, Olsen O-A (2014) Genome interplay in the grain transcriptome of hexaploid bread wheat. Science 345:1250091
-
(2014)
Science
, vol.345
, pp. 1250091
-
-
Pfeifer, M.1
Kugler, K.G.2
Sandve, S.R.3
Zhan, B.4
Rudi, H.5
Hvidsten, T.R.6
Mayer, K.F.7
Olsen, O.-A.8
-
51
-
-
0346091243
-
Flowering time divergence and genomic rearrangements in resynthesized Brassica polyploids (Brassicaceae)
-
Pires JC, Zhao J, Schranz M, Leon EJ, Quijada PA, Lukens LN, Osborn TC (2004) Flowering time divergence and genomic rearrangements in resynthesized Brassica polyploids (Brassicaceae). Biol J Lin Soc 82:675–688
-
(2004)
Biol J Lin Soc
, vol.82
, pp. 675-688
-
-
Pires, J.C.1
Zhao, J.2
Schranz, M.3
Leon, E.J.4
Quijada, P.A.5
Lukens, L.N.6
Osborn, T.C.7
-
52
-
-
84890316359
-
Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo-and neoduplicated subgenomes
-
COI: 1:CAS:528:DC%2BC3sXhvV2lsLrE, PID: 24164652
-
Pont C, Murat F, Guizard S, Flores R, Foucrier S, Bidet Y, Quraishi UM, Alaux M, Doležel J, Fahima T (2013) Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo-and neoduplicated subgenomes. Plant J 76:1030–1044
-
(2013)
Plant J
, vol.76
, pp. 1030-1044
-
-
Pont, C.1
Murat, F.2
Guizard, S.3
Flores, R.4
Foucrier, S.5
Bidet, Y.6
Quraishi, U.M.7
Alaux, M.8
Doležel, J.9
Fahima, T.10
-
54
-
-
84862820384
-
Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines
-
Qi B, Huang W, Zhu B, Zhong X, Guo J, Zhao N, Xu C, Zhang H, Pang J, Han F, Liu B (2012) Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines. BMC Biol 10: art no 3
-
(2012)
BMC Biol 10: art no
, pp. 3
-
-
Qi, B.1
Huang, W.2
Zhu, B.3
Zhong, X.4
Guo, J.5
Zhao, N.6
Xu, C.7
Zhang, H.8
Pang, J.9
Han, F.10
Liu, B.11
-
55
-
-
80052831072
-
Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome
-
COI: 1:CAS:528:DC%2BC3MXhtlajs77M, PID: 21917144
-
Saintenac C, Jiang D, Akhunov ED (2011) Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome. Genome Biol 12:R88
-
(2011)
Genome Biol
, vol.12
, pp. 88
-
-
Saintenac, C.1
Jiang, D.2
Akhunov, E.D.3
-
56
-
-
0036272895
-
Genetics and geography of wild cereal domestication in the Near East
-
COI: 1:CAS:528:DC%2BD38XksFOltrg%3D, PID: 12042770
-
Salamini F, Özkan H, Brandolini A, Schäfer-Pregl R, Martin W (2002) Genetics and geography of wild cereal domestication in the Near East. Nat Rev Genet 3:429–441
-
(2002)
Nat Rev Genet
, vol.3
, pp. 429-441
-
-
Salamini, F.1
Özkan, H.2
Brandolini, A.3
Schäfer-Pregl, R.4
Martin, W.5
-
57
-
-
16344367626
-
Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae)
-
COI: 1:CAS:528:DC%2BD2MXjsFaltL4%3D, PID: 15773943
-
Salmon A, Ainouche ML, Wendel JF (2005) Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). Mol Ecol 14:1163–1175
-
(2005)
Mol Ecol
, vol.14
, pp. 1163-1175
-
-
Salmon, A.1
Ainouche, M.L.2
Wendel, J.F.3
-
58
-
-
0034866855
-
Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat
-
COI: 1:CAS:528:DC%2BD3MXmsFKiurk%3D, PID: 11487690
-
Shaked H, Kashkush K, Ozkan H, Feldman M, Levy AA (2001) Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat. Plant Cell 13:1749–1759
-
(2001)
Plant Cell
, vol.13
, pp. 1749-1759
-
-
Shaked, H.1
Kashkush, K.2
Ozkan, H.3
Feldman, M.4
Levy, A.A.5
-
59
-
-
34547661521
-
Genetic and epigenetic alteration among three homoeologous genes of a class E MADS box gene in hexaploid wheat
-
COI: 1:CAS:528:DC%2BD2sXptFKgu7g%3D, PID: 17586655
-
Shitsukawa N, Tahira C, K-i Kassai, Hirabayashi C, Shimizu T, Takumi S, Mochida K, Kawaura K, Ogihara Y, Murai K (2007) Genetic and epigenetic alteration among three homoeologous genes of a class E MADS box gene in hexaploid wheat. Plant Cell 19:1723–1737
-
(2007)
Plant Cell
, vol.19
, pp. 1723-1737
-
-
Shitsukawa, N.1
Tahira, C.2
K-i, K.3
Hirabayashi, C.4
Shimizu, T.5
Takumi, S.6
Mochida, K.7
Kawaura, K.8
Ogihara, Y.9
Murai, K.10
-
60
-
-
67651052323
-
The role of hybridization in plant speciation
-
COI: 1:CAS:528:DC%2BD1MXntFGlsLc%3D, PID: 19575590
-
Soltis PS, Soltis DE (2009) The role of hybridization in plant speciation. Annu Rev Plant Biol 60:561–588
-
(2009)
Annu Rev Plant Biol
, vol.60
, pp. 561-588
-
-
Soltis, P.S.1
Soltis, D.E.2
-
61
-
-
84881664044
-
The 5-methyl-deoxy-cytidine (5mdC) localization to reveal in situ the dynamics of DNA methylation chromatin pattern in a variety of plant organ and tissue cells during development
-
COI: 1:CAS:528:DC%2BC3sXhsFWrtrfM, PID: 23193951
-
Testillano PS, Solis MT, Risueno MC (2013) The 5-methyl-deoxy-cytidine (5mdC) localization to reveal in situ the dynamics of DNA methylation chromatin pattern in a variety of plant organ and tissue cells during development. Physiol Plant 149:104–113
-
(2013)
Physiol Plant
, vol.149
, pp. 104-113
-
-
Testillano, P.S.1
Solis, M.T.2
Risueno, M.C.3
-
62
-
-
84904382612
-
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
-
The International Wheat Genome Sequencing Consortium (IWGSC)
-
The International Wheat Genome Sequencing Consortium (IWGSC) (2014) A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science 345(6194):1251788
-
(2014)
Science
, vol.345
, Issue.6194
, pp. 1251788
-
-
-
63
-
-
70349325524
-
The evolutionary significance of ancient genome duplications
-
PID: 19652647
-
Van de Peer Y, Maere S, Meyer A (2009) The evolutionary significance of ancient genome duplications. Nat Rev Genet 10:725–732
-
(2009)
Nat Rev Genet
, vol.10
, pp. 725-732
-
-
Van de Peer, Y.1
Maere, S.2
Meyer, A.3
-
64
-
-
0033974956
-
Genome evolution in polyploids
-
COI: 1:CAS:528:DC%2BD3cXht1Grsrk%3D, PID: 10688139
-
Wendel JF (2000) Genome evolution in polyploids. Plant Mol Biol 42:225–249
-
(2000)
Plant Mol Biol
, vol.42
, pp. 225-249
-
-
Wendel, J.F.1
-
65
-
-
59449095429
-
Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids
-
COI: 1:CAS:528:DC%2BD1MXhtFSnu7g%3D, PID: 18998158
-
Xu Y, Zhong L, Wu X, Fang X, Wang J (2009) Rapid alterations of gene expression and cytosine methylation in newly synthesized Brassica napus allopolyploids. Planta 229:471–483
-
(2009)
Planta
, vol.229
, pp. 471-483
-
-
Xu, Y.1
Zhong, L.2
Wu, X.3
Fang, X.4
Wang, J.5
-
66
-
-
84867651974
-
Mobilization of Stowaway-like MITEs in newly formed allohexaploid wheat species
-
COI: 1:CAS:528:DC%2BC38XhsFSqsLnK, PID: 22933118
-
Yaakov B, Kashkush K (2012) Mobilization of Stowaway-like MITEs in newly formed allohexaploid wheat species. Plant Mol Biol 80:419–427
-
(2012)
Plant Mol Biol
, vol.80
, pp. 419-427
-
-
Yaakov, B.1
Kashkush, K.2
-
67
-
-
84872611513
-
Homoeolog expression bias and expression level dominance in allopolyploid cotton
-
COI: 1:CAS:528:DC%2BC3sXht1Cmtbs%3D, PID: 23169565
-
Yoo MJ, Szadkowski E, Wendel JF (2013) Homoeolog expression bias and expression level dominance in allopolyploid cotton. Heredity 110:171–180
-
(2013)
Heredity
, vol.110
, pp. 171-180
-
-
Yoo, M.J.1
Szadkowski, E.2
Wendel, J.F.3
-
68
-
-
84913603003
-
Nonadditive gene expression in polyploids
-
COI: 1:CAS:528:DC%2BC2cXitFCkurbN, PID: 25421600
-
Yoo MJ, Liu XX, Pires JC, Soltis PS, Soltis DE (2014) Nonadditive gene expression in polyploids. Annu Rev Genet 48:485–517
-
(2014)
Annu Rev Genet
, vol.48
, pp. 485-517
-
-
Yoo, M.J.1
Liu, X.X.2
Pires, J.C.3
Soltis, P.S.4
Soltis, D.E.5
-
69
-
-
34347328174
-
Endosperm-specific hypomethylation, and meiotic inheritance and variation of DNA methylation level and pattern in sorghum (Sorghum bicolor L.) inter-strain hybrids
-
COI: 1:CAS:528:DC%2BD2sXmvFalsr8%3D, PID: 17486309
-
Zhang MS, Yan HY, Zhao N, Lin XY, Pang JS, Xu KZ, Liu LX, Liu B (2007) Endosperm-specific hypomethylation, and meiotic inheritance and variation of DNA methylation level and pattern in sorghum (Sorghum bicolor L.) inter-strain hybrids. Theor Appl Genet 115:195–207
-
(2007)
Theor Appl Genet
, vol.115
, pp. 195-207
-
-
Zhang, M.S.1
Yan, H.Y.2
Zhao, N.3
Lin, X.Y.4
Pang, J.S.5
Xu, K.Z.6
Liu, L.X.7
Liu, B.8
-
70
-
-
43549115088
-
Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize
-
PID: 18239133
-
Zhang W, Lee H-R, Koo D-H, Jiang J (2008) Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize. Plant Cell 20:25–34
-
(2008)
Plant Cell
, vol.20
, pp. 25-34
-
-
Zhang, W.1
Lee, H.-R.2
Koo, D.-H.3
Jiang, J.4
-
71
-
-
84874493629
-
Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat
-
COI: 1:CAS:528:DC%2BC3sXkvVKnsro%3D, PID: 23401544
-
Zhang H, Bian Y, Gou X, Zhu B, Xu C, Qi B, Li N, Rustgi S, Zhou H, Han F (2013) Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat. Proc Natl Acad Sci USA 110:3447–3452
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 3447-3452
-
-
Zhang, H.1
Bian, Y.2
Gou, X.3
Zhu, B.4
Xu, C.5
Qi, B.6
Li, N.7
Rustgi, S.8
Zhou, H.9
Han, F.10
-
72
-
-
84907361931
-
Evolution of the BBAA component of bread wheat during its history at the allohexaploid level
-
COI: 1:CAS:528:DC%2BC2cXhsFaks7%2FE, PID: 24989045
-
Zhang H, Zhu B, Qi B, Gou X, Dong Y, Xu C, Zhang B, Huang W, Liu C, Wang X (2014) Evolution of the BBAA component of bread wheat during its history at the allohexaploid level. Plant Cell 26:2761–2776
-
(2014)
Plant Cell
, vol.26
, pp. 2761-2776
-
-
Zhang, H.1
Zhu, B.2
Qi, B.3
Gou, X.4
Dong, Y.5
Xu, C.6
Zhang, B.7
Huang, W.8
Liu, C.9
Wang, X.10
-
73
-
-
79960125436
-
Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat
-
COI: 1:CAS:528:DC%2BC3MXhtVGiu73J, PID: 21515577
-
Zhao N, Zhu B, Li M, Wang L, Xu L, Zhang H, Zheng S, Qi B, Han F, Liu B (2011) Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat. Genetics 188:499–510
-
(2011)
Genetics
, vol.188
, pp. 499-510
-
-
Zhao, N.1
Zhu, B.2
Li, M.3
Wang, L.4
Xu, L.5
Zhang, H.6
Zheng, S.7
Qi, B.8
Han, F.9
Liu, B.10
-
74
-
-
0002803696
-
Hybridization between amphidiploids and the evolution of polyploids in the wheat (Aegilops–Triticum) Group
-
Zohary D, Feldman M (1962) Hybridization between amphidiploids and the evolution of polyploids in the wheat (Aegilops–Triticum) Group. Evolution 16:44–61
-
(1962)
Evolution
, vol.16
, pp. 44-61
-
-
Zohary, D.1
Feldman, M.2
|