-
1
-
-
84865727393
-
The GENCODE v7 catalog of human long noncoding rnas: analysis of their gene structure, evolution, and expression
-
COI: 1:CAS:528:DC%2BC38XhtlentLvO, PID: 22955988
-
Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, et al. The GENCODE v7 catalog of human long noncoding rnas: analysis of their gene structure, evolution, and expression. Genome Res. 2012;22:1775–89.
-
(2012)
Genome Res
, vol.22
, pp. 1775-1789
-
-
Derrien, T.1
Johnson, R.2
Bussotti, G.3
Tanzer, A.4
Djebali, S.5
Tilgner, H.6
-
2
-
-
74049141478
-
Epigenetics in cancer
-
COI: 1:CAS:528:DC%2BC3cXktlCntw%3D%3D
-
Sharma S, Kelly TK, Jones PA. Epigenetics in cancer. Carcinog. 2010;31:27–36.
-
(2010)
Carcinog
, vol.31
, pp. 27-36
-
-
Sharma, S.1
Kelly, T.K.2
Jones, P.A.3
-
3
-
-
80053045739
-
Molecular mechanisms of long noncoding RNAs
-
COI: 1:CAS:528:DC%2BC3MXhtFymsLjP, PID: 21925379
-
Wang KC, Chang HY. Molecular mechanisms of long noncoding RNAs. Mol Cell. 2011;43:904–14.
-
(2011)
Mol Cell
, vol.43
, pp. 904-914
-
-
Wang, K.C.1
Chang, H.Y.2
-
4
-
-
78651390167
-
Long intergenic non-coding RNAs: new links in cancer progression
-
COI: 1:CAS:528:DC%2BC3MXovF2l, PID: 21199792
-
Tsai MC, Spitale RC, Chang HY. Long intergenic non-coding RNAs: new links in cancer progression. Cancer Res. 2011;71:3–7.
-
(2011)
Cancer Res
, vol.71
, pp. 3-7
-
-
Tsai, M.C.1
Spitale, R.C.2
Chang, H.Y.3
-
5
-
-
77954572735
-
Long noncoding RNA as modular scaffold of histone modification complexes
-
COI: 1:CAS:528:DC%2BC3cXps1ehtb0%3D
-
Tsai MC, Manor O, Wan Y, Mosammaparast N, Wang JK, Lan F, et al. Long noncoding RNA as modular scaffold of histone modification complexes. Sci. 2010;329:689–93.
-
(2010)
Sci
, vol.329
, pp. 689-693
-
-
Tsai, M.C.1
Manor, O.2
Wan, Y.3
Mosammaparast, N.4
Wang, J.K.5
Lan, F.6
-
6
-
-
34248162440
-
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
-
COI: 1:CAS:528:DC%2BD2sXltF2isbc%3D, PID: 17387145
-
Ponjavic J, Ponting CP, Lunter G. Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs. Genome Res. 2007;17:556–65.
-
(2007)
Genome Res
, vol.17
, pp. 556-565
-
-
Ponjavic, J.1
Ponting, C.P.2
Lunter, G.3
-
7
-
-
79952901680
-
Enhancer function: new insights into the regulation of tissue-specific gene expression
-
COI: 1:CAS:528:DC%2BC3MXjsVGkt7w%3D, PID: 21358745
-
Ong CT, Corces VG. Enhancer function: new insights into the regulation of tissue-specific gene expression. Nat Rev Genet. 2011;12:283–93.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 283-293
-
-
Ong, C.T.1
Corces, V.G.2
-
8
-
-
84856283173
-
miR-31 and its host gene lncRNA LOC554202 are regulated by promoter hypermethylation in triple-negative breast cancer
-
COI: 1:CAS:528:DC%2BC38XkvVOquro%3D, PID: 22289355
-
Augoff K, McCue B, Plow EF, Sossey-Alaoui K. miR-31 and its host gene lncRNA LOC554202 are regulated by promoter hypermethylation in triple-negative breast cancer. Mol Cancer. 2012;11:5.
-
(2012)
Mol Cancer
, vol.11
, pp. 5
-
-
Augoff, K.1
McCue, B.2
Plow, E.F.3
Sossey-Alaoui, K.4
-
9
-
-
84877270735
-
LncRNA loc285194 is a p53-regulated tumor suppressor
-
COI: 1:CAS:528:DC%2BC3sXntVOqtbY%3D, PID: 23558749
-
Liu Q, Huang J, Zhou N, Zhang Z, Zhang A, Lu Z, et al. LncRNA loc285194 is a p53-regulated tumor suppressor. Nucleic Acids Res. 2013;41:4976–87.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 4976-4987
-
-
Liu, Q.1
Huang, J.2
Zhou, N.3
Zhang, Z.4
Zhang, A.5
Lu, Z.6
-
10
-
-
84861881510
-
BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration
-
COI: 1:CAS:528:DC%2BC38XoslSisLY%3D, PID: 22581800
-
Flockhart RJ, Webster DE, Qu K, Mascarenhas N, Kovalski J, Kretz M, et al. BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration. Genome Res. 2012;22:1006–14.
-
(2012)
Genome Res
, vol.22
, pp. 1006-1014
-
-
Flockhart, R.J.1
Webster, D.E.2
Qu, K.3
Mascarenhas, N.4
Kovalski, J.5
Kretz, M.6
-
11
-
-
84887441210
-
Extracellular vesicle-mediated transfer of a novel long noncoding RNA TUC339: a mechanism of intercellular signaling in human hepatocellular cancer
-
COI: 1:CAS:528:DC%2BC2MXjt1Wru70%3D, PID: 24167654
-
Kogure T, Yan IK, Lin WL, Patel T. Extracellular vesicle-mediated transfer of a novel long noncoding RNA TUC339: a mechanism of intercellular signaling in human hepatocellular cancer. Genes Cancer. 2013;4:261–72.
-
(2013)
Genes Cancer
, vol.4
, pp. 261-272
-
-
Kogure, T.1
Yan, I.K.2
Lin, W.L.3
Patel, T.4
-
12
-
-
84873451950
-
The non-coding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells
-
COI: 1:CAS:528:DC%2BC3sXhvV2ktr4%3D, PID: 23243023
-
Gutschner T, Hammerle M, Eissmann M, Hsu J, Kim Y, Hung G, et al. The non-coding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells. Cancer Res. 2013;73:1180–9.
-
(2013)
Cancer Res
, vol.73
, pp. 1180-1189
-
-
Gutschner, T.1
Hammerle, M.2
Eissmann, M.3
Hsu, J.4
Kim, Y.5
Hung, G.6
-
13
-
-
84885015533
-
Long non-coding RNA MEG3 inhibits NSCLC cells proliferation and induces apoptosis by affecting p53 expression
-
PID: 24098911
-
Lu K, Li W, Liu X, Sun M, Zhang M, Wu W, et al. Long non-coding RNA MEG3 inhibits NSCLC cells proliferation and induces apoptosis by affecting p53 expression. BMC Cancer. 2013;13:461.
-
(2013)
BMC Cancer
, vol.13
, pp. 461
-
-
Lu, K.1
Li, W.2
Liu, X.3
Sun, M.4
Zhang, M.5
Wu, W.6
-
14
-
-
67649671961
-
Long noncoding RNAs: functional surprises from the RNA world
-
COI: 1:CAS:528:DC%2BD1MXos1GitLw%3D, PID: 19571179
-
Wilusz JE, Sunwoo H, Spector DL. Long noncoding RNAs: functional surprises from the RNA world. Genes Dev. 2009;23:1494–504.
-
(2009)
Genes Dev
, vol.23
, pp. 1494-1504
-
-
Wilusz, J.E.1
Sunwoo, H.2
Spector, D.L.3
-
15
-
-
80052869283
-
LincRNAs act in the circuitry controlling pluripotency and differentiation
-
COI: 1:CAS:528:DC%2BC3MXhtFers7rL
-
Guttman M, Donaghey J, Carey BW, Garber M, Grenier JK, Munson G, et al. LincRNAs act in the circuitry controlling pluripotency and differentiation. Nat. 2011;477:295–300.
-
(2011)
Nat
, vol.477
, pp. 295-300
-
-
Guttman, M.1
Donaghey, J.2
Carey, B.W.3
Garber, M.4
Grenier, J.K.5
Munson, G.6
-
16
-
-
78650240738
-
The X as model for RNA’s niche in epigenomic regulation
-
PID: 20739414
-
Lee JT. The X as model for RNA’s niche in epigenomic regulation. Cold Spring Harb Perspect Biol. 2010;2(9):a003749.
-
(2010)
Cold Spring Harb Perspect Biol
, vol.2
, Issue.9
, pp. 003749
-
-
Lee, J.T.1
-
17
-
-
79953858658
-
No-nonsense functions for long noncoding RNAs
-
COI: 1:CAS:528:DC%2BC3MXkvVGlsLc%3D, PID: 21496640
-
Nagano T, Fraser P. No-nonsense functions for long noncoding RNAs. Cell. 2011;145:178–81.
-
(2011)
Cell
, vol.145
, pp. 178-181
-
-
Nagano, T.1
Fraser, P.2
-
18
-
-
79961202865
-
Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression
-
COI: 1:CAS:528:DC%2BC3MXpsFOjsr8%3D, PID: 21804560
-
Prensner JR, Iyer MK, Balbin OA, Dhanasekaran SM, Cao Q, Brenner JC, et al. Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression. Nat Biotechnol. 2011;29:742–9.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 742-749
-
-
Prensner, J.R.1
Iyer, M.K.2
Balbin, O.A.3
Dhanasekaran, S.M.4
Cao, Q.5
Brenner, J.C.6
-
19
-
-
84872825450
-
Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation
-
COI: 1:CAS:528:DC%2BC38Xht1GrsrrF, PID: 21678027
-
Lai MC, Yang Z, Zhou L, Zhu QQ, Xie HY, Zhang F, et al. Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation. Med Oncol. 2012;29:1810–6.
-
(2012)
Med Oncol
, vol.29
, pp. 1810-1816
-
-
Lai, M.C.1
Yang, Z.2
Zhou, L.3
Zhu, Q.Q.4
Xie, H.Y.5
Zhang, F.6
-
20
-
-
81855183267
-
microRNA-29 can regulate expression of the long non-coding RNA gene MEG3 in hepatocellular cancer
-
COI: 1:CAS:528:DC%2BC3MXmslSktL0%3D, PID: 21625215
-
Braconi C, Kogure T, Valeri N, Huang N, Nuovo G, Costinean S, et al. microRNA-29 can regulate expression of the long non-coding RNA gene MEG3 in hepatocellular cancer. Oncogene. 2011;30:4750–6.
-
(2011)
Oncogene
, vol.30
, pp. 4750-4756
-
-
Braconi, C.1
Kogure, T.2
Valeri, N.3
Huang, N.4
Nuovo, G.5
Costinean, S.6
-
21
-
-
84896441491
-
Long non-coding RNA HOTAIR promotes cell migration and invasion via down-regulation of RNA binding motif protein 38 in hepatocellular carcinoma cells
-
COI: 1:CAS:528:DC%2BC2cXhtlWhtbbK, PID: 24663081
-
Ding C, Cheng S, Yang Z, Lv Z, Xiao H, Du C, et al. Long non-coding RNA HOTAIR promotes cell migration and invasion via down-regulation of RNA binding motif protein 38 in hepatocellular carcinoma cells. Int J Mol Sci. 2014;15:4060–76.
-
(2014)
Int J Mol Sci
, vol.15
, pp. 4060-4076
-
-
Ding, C.1
Cheng, S.2
Yang, Z.3
Lv, Z.4
Xiao, H.5
Du, C.6
-
22
-
-
84876718756
-
Hepatitis B virus X protein (HBx)-related long noncoding rna (lncRNA) down-regulated expression by HBx (Dreh) inhibits hepatocellular carcinoma metastasis by targeting the intermediate filament protein vimentin
-
COI: 1:CAS:528:DC%2BC3sXms1egs7c%3D
-
Huang JF, Guo YJ, Zhao CX, Yuan SX, Wang Y, Tang GN, et al. Hepatitis B virus X protein (HBx)-related long noncoding rna (lncRNA) down-regulated expression by HBx (Dreh) inhibits hepatocellular carcinoma metastasis by targeting the intermediate filament protein vimentin. Hepatol. 2013;57:1882–92.
-
(2013)
Hepatol
, vol.57
, pp. 1882-1892
-
-
Huang, J.F.1
Guo, Y.J.2
Zhao, C.X.3
Yuan, S.X.4
Wang, Y.5
Tang, G.N.6
-
23
-
-
84895763493
-
Upregulation of the long non-coding RNA PlncRNA-1 promotes esophageal squamous carcinoma cell proliferation and correlates with advanced clinical stage
-
COI: 1:CAS:528:DC%2BC3sXhvFOjtLrK, PID: 24337686
-
Wang CM, Wu QQ, Li SQ, Chen FJ, Tuo L, Xie HW, et al. Upregulation of the long non-coding RNA PlncRNA-1 promotes esophageal squamous carcinoma cell proliferation and correlates with advanced clinical stage. Dig Dis Sci. 2014;59:591–7.
-
(2014)
Dig Dis Sci
, vol.59
, pp. 591-597
-
-
Wang, C.M.1
Wu, Q.Q.2
Li, S.Q.3
Chen, F.J.4
Tuo, L.5
Xie, H.W.6
-
24
-
-
84922392754
-
Long noncoding RNA SPRY4-IT1 is upregulated in esophageal squamous cell carcinoma and associated with poor prognosis
-
COI: 1:CAS:528:DC%2BC2cXnslOgs7Y%3D, PID: 24810925
-
Xie HW, Wu QQ, Zhu B, Chen FJ, Ji L, Li SQ, et al. Long noncoding RNA SPRY4-IT1 is upregulated in esophageal squamous cell carcinoma and associated with poor prognosis. Tumour Biol. 2014;35(8):7743–54.
-
(2014)
Tumour Biol
, vol.35
, Issue.8
, pp. 7743-7754
-
-
Xie, H.W.1
Wu, Q.Q.2
Zhu, B.3
Chen, F.J.4
Ji, L.5
Li, S.Q.6
-
25
-
-
79961202865
-
Transcriptome sequencing identifies PCAT-1, a novel lincRNA implicated in prostate cancer progression
-
COI: 1:CAS:528:DC%2BC3MXpsFOjsr8%3D, PID: 21804560
-
Prensner JR, Iyer MK, Balbin OA, Dhanasekaran SM, Cao Q, Brenner JC, et al. Transcriptome sequencing identifies PCAT-1, a novel lincRNA implicated in prostate cancer progression. Nat Biotechnol. 2011;29:742–9.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 742-749
-
-
Prensner, J.R.1
Iyer, M.K.2
Balbin, O.A.3
Dhanasekaran, S.M.4
Cao, Q.5
Brenner, J.C.6
-
26
-
-
84861202972
-
The long non-coding RNAs: a new (p)layer in the “dark matter
-
PID: 22303401
-
Derrien T, Guigo R, Johnson R. The long non-coding RNAs: a new (p)layer in the “dark matter”. Front Genet. 2011;2:107.
-
(2011)
Front Genet
, vol.2
, pp. 107
-
-
Derrien, T.1
Guigo, R.2
Johnson, R.3
-
27
-
-
33846984935
-
Transcriptional noise and the fidelity of initiation by RNA polymerase II
-
COI: 1:CAS:528:DC%2BD2sXht1Gqurs%3D, PID: 17277804
-
Struhl K. Transcriptional noise and the fidelity of initiation by RNA polymerase II. Nat Struct Mol Biol. 2007;14:103–5.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 103-105
-
-
Struhl, K.1
-
28
-
-
84867900638
-
Long non-coding RNAs and cancer: a new frontier of translational research?
-
COI: 1:CAS:528:DC%2BC38XhsFGktr%2FI, PID: 22266873
-
Spizzo R, Almeida MI, Colombatti A, Calin GA. Long non-coding RNAs and cancer: a new frontier of translational research? Oncogene. 2012;31:4577–87.
-
(2012)
Oncogene
, vol.31
, pp. 4577-4587
-
-
Spizzo, R.1
Almeida, M.I.2
Colombatti, A.3
Calin, G.A.4
-
29
-
-
84896524997
-
PCAT-1, a long noncoding RNA, regulates BRCA2 and controls homologous recombination in cancer
-
COI: 1:CAS:528:DC%2BC2cXktF2mtbc%3D, PID: 24473064
-
Prensner JR, Chen W, Iyer MK, Cao Q, Ma T, Han S, et al. PCAT-1, a long noncoding RNA, regulates BRCA2 and controls homologous recombination in cancer. Cancer Res. 2014;74:1651–60.
-
(2014)
Cancer Res
, vol.74
, pp. 1651-1660
-
-
Prensner, J.R.1
Chen, W.2
Iyer, M.K.3
Cao, Q.4
Ma, T.5
Han, S.6
-
30
-
-
84876807416
-
Overexpression of long noncoding RNA PCAT-1 is a novel biomarker of poor prognosis in patients with colorectal cancer
-
PID: 23640607
-
Ge X, Chen Y, Liao X, Liu D, Li F, Ruan H, et al. Overexpression of long noncoding RNA PCAT-1 is a novel biomarker of poor prognosis in patients with colorectal cancer. Med Oncol. 2013;30:588.
-
(2013)
Med Oncol
, vol.30
, pp. 588
-
-
Ge, X.1
Chen, Y.2
Liao, X.3
Liu, D.4
Li, F.5
Ruan, H.6
|