-
1
-
-
84894380391
-
Emerging evidence for functional peptides encoded by short open reading frames
-
COI: 1:CAS:528:DC%2BC2cXitFOntL8%3D, PID: 24514441
-
Andrews SJ, Rothnagel JA (2014) Emerging evidence for functional peptides encoded by short open reading frames. Nat Rev Genet 15(3):193–204
-
(2014)
Nat Rev Genet
, vol.15
, Issue.3
, pp. 193-204
-
-
Andrews, S.J.1
Rothnagel, J.A.2
-
3
-
-
84884660617
-
Gene expression regulation by upstream open reading frames and human disease
-
COI: 1:CAS:528:DC%2BC3sXhsVCku7zI, PID: 23950723
-
Barbosa C, Peixeiro I, Romão L (2013) Gene expression regulation by upstream open reading frames and human disease. PLoS Genet 9(8):e1003529
-
(2013)
PLoS Genet
, vol.9
, Issue.8
, pp. 1003529
-
-
Barbosa, C.1
Peixeiro, I.2
Romão, L.3
-
4
-
-
66149118241
-
Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans
-
COI: 1:CAS:528:DC%2BD1MXmt1Kht7s%3D, PID: 19372376
-
Calvo SE, Pagliarini DJ, Mootha VK (2009) Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans. Proc Natl Acad Sci USA 106(18):7507–7512
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.18
, pp. 7507-7512
-
-
Calvo, S.E.1
Pagliarini, D.J.2
Mootha, V.K.3
-
5
-
-
79952610870
-
Making sense of cancer genomic data
-
COI: 1:CAS:528:DC%2BC3MXktFOlsrk%3D, PID: 21406553
-
Chin L, Hahn WC, Getz G, Meyerson M (2011) Making sense of cancer genomic data. Genes Dev 25(6):534–555
-
(2011)
Genes Dev
, vol.25
, Issue.6
, pp. 534-555
-
-
Chin, L.1
Hahn, W.C.2
Getz, G.3
Meyerson, M.4
-
6
-
-
84946040120
-
COSMIC: exploring the world’s knowledge of somatic mutations in human cancer
-
PID: 25355519
-
Forbes SA, Beare D, Gunasekaran P et al (2014) COSMIC: exploring the world’s knowledge of somatic mutations in human cancer. Nucleic Acids Res 43(database issue):D805–D811
-
(2014)
Nucleic Acids Res
, vol.43
, Issue.database issue
, pp. 805-811
-
-
Forbes, S.A.1
Beare, D.2
Gunasekaran, P.3
-
7
-
-
77954296666
-
A new bioinformatics analysis tools framework at EMBL-EBI
-
Goujon M, McWilliam H, Li W (2010) A new bioinformatics analysis tools framework at EMBL-EBI. Nucleic Acids Res. doi:10.1093/nar/gkq313
-
(2010)
Nucleic Acids Res
-
-
Goujon, M.1
McWilliam, H.2
Li, W.3
-
8
-
-
36148976155
-
Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes
-
PID: 17663791
-
Hayden CA, Jorgensen RA (2007) Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes. BMC Biol 5:32
-
(2007)
BMC Biol
, vol.5
, pp. 32
-
-
Hayden, C.A.1
Jorgensen, R.A.2
-
9
-
-
84910142107
-
Sustained translational repression of lactate dehydrogenase 1 in Toxoplasma gondii bradyzoites is conferred by a small regulatory RNA hairpin
-
COI: 1:CAS:528:DC%2BC2cXhvV2hsLfF, PID: 25223457
-
Holmes M, Itaas V, Ananvoranich S (2014) Sustained translational repression of lactate dehydrogenase 1 in Toxoplasma gondii bradyzoites is conferred by a small regulatory RNA hairpin. FEBS J 281(22):5077–5091
-
(2014)
FEBS J
, vol.281
, Issue.22
, pp. 5077-5091
-
-
Holmes, M.1
Itaas, V.2
Ananvoranich, S.3
-
10
-
-
78650071942
-
HGAL, a germinal center specific protein, decreases lymphoma cell motility by modulation of the RhoA signaling pathway
-
COI: 1:CAS:528:DC%2BC3MXot1c%3D, PID: 20844236
-
Jiang X, Lu X, McNamara G et al (2010) HGAL, a germinal center specific protein, decreases lymphoma cell motility by modulation of the RhoA signaling pathway. Blood 116(24):5217–5227
-
(2010)
Blood
, vol.116
, Issue.24
, pp. 5217-5227
-
-
Jiang, X.1
Lu, X.2
McNamara, G.3
-
11
-
-
84907212851
-
Functional and structural analysis of maize hsp101 IRES
-
PID: 25222534
-
Jiménez-González AS, Fernández N, Martínez-Salas E, Sánchez de Jiménez E (2014) Functional and structural analysis of maize hsp101 IRES. PLoS One 9(9):e107459
-
(2014)
PLoS One
, vol.9
, Issue.9
, pp. 107459
-
-
Jiménez-González, A.S.1
Fernández, N.2
Martínez-Salas, E.3
Sánchez de Jiménez, E.4
-
12
-
-
84901599553
-
A draft map of the human proteome
-
COI: 1:CAS:528:DC%2BC2cXoslCrtrc%3D, PID: 24870542
-
Kim MS, Pinto SM, Getnet D et al (2014) A draft map of the human proteome. Nature 509(7502):575–581
-
(2014)
Nature
, vol.509
, Issue.7502
, pp. 575-581
-
-
Kim, M.S.1
Pinto, S.M.2
Getnet, D.3
-
13
-
-
0023665902
-
An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs
-
COI: 1:CAS:528:DyaL2sXmtlSiurg%3D, PID: 3313277
-
Kozak M (1987) An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 15(20):8125–8148
-
(1987)
Nucleic Acids Res
, vol.15
, Issue.20
, pp. 8125-8148
-
-
Kozak, M.1
-
14
-
-
0026342613
-
An analysis of vertebrate mRNA sequences: intimations of translational control
-
COI: 1:CAS:528:DyaK3MXmsV2jtL0%3D, PID: 1955461
-
Kozak M (1991) An analysis of vertebrate mRNA sequences: intimations of translational control. J Cell Biol 115(4):887–903
-
(1991)
J Cell Biol
, vol.115
, Issue.4
, pp. 887-903
-
-
Kozak, M.1
-
15
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
COI: 1:CAS:528:DC%2BD2sXhtlaqsL%2FM, PID: 17846036
-
Larkin MA, Blackshields G, Brown NP (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23(21):2947–2948
-
(2007)
Bioinformatics
, vol.23
, Issue.21
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
-
16
-
-
79956194190
-
Germinal center-specific protein human germinal center associated lymphoma directly interacts with both myosin and actin and increases the binding of myosin to actin
-
COI: 1:CAS:528:DC%2BC3MXnt1Churc%3D, PID: 21447067
-
Lu X, Kazmierczak K, Jiang X et al (2011) Germinal center-specific protein human germinal center associated lymphoma directly interacts with both myosin and actin and increases the binding of myosin to actin. FEBS J 278(11):1922–1931
-
(2011)
FEBS J
, vol.278
, Issue.11
, pp. 1922-1931
-
-
Lu, X.1
Kazmierczak, K.2
Jiang, X.3
-
17
-
-
84908366054
-
Proline-serine-threonine phosphatase interacting protein 1 inhibition of T-cell receptor signaling depends on its SH3 domain
-
COI: 1:CAS:528:DC%2BC2cXhsVGgsrbJ, PID: 25040622
-
Marcos T, Ruiz-Martín V, de la Puerta ML et al (2014) Proline-serine-threonine phosphatase interacting protein 1 inhibition of T-cell receptor signaling depends on its SH3 domain. FEBS J 281(17):3844–3854
-
(2014)
FEBS J
, vol.281
, Issue.17
, pp. 3844-3854
-
-
Marcos, T.1
Ruiz-Martín, V.2
de la Puerta, M.L.3
-
18
-
-
0034459468
-
Upstream open reading frames as regulators of mRNA translation
-
COI: 1:CAS:528:DC%2BD3MXitFGkurs%3D, PID: 11073965
-
Morris DR, Geballe AP (2000) Upstream open reading frames as regulators of mRNA translation. Mol Cell Biol 20(23):8635–8642
-
(2000)
Mol Cell Biol
, vol.20
, Issue.23
, pp. 8635-8642
-
-
Morris, D.R.1
Geballe, A.P.2
-
19
-
-
79960959927
-
Translation reinitiation relies on the interaction between eIF3a/TIF32 and progressively folded cis-acting mRNA elements preceding short uORFs
-
PID: 21750682
-
Munzarová V, Pánek J, Gunišová S et al (2011) Translation reinitiation relies on the interaction between eIF3a/TIF32 and progressively folded cis-acting mRNA elements preceding short uORFs. PLoS Genet 7(7):e1002137
-
(2011)
PLoS Genet
, vol.7
, Issue.7
, pp. 1002137
-
-
Munzarová, V.1
Pánek, J.2
Gunišová, S.3
-
20
-
-
0025921733
-
The G—A mutation at position +22 3′ to the Cap site of the beta-globin gene as a possible cause for a beta-thalassemia
-
COI: 1:CAS:528:DyaK3MXmtVCru7k%3D, PID: 1717406
-
Oner R, Agarwal S, Dimovski AJ et al (1991) The G—A mutation at position +22 3′ to the Cap site of the beta-globin gene as a possible cause for a beta-thalassemia. Hemoglobin 15(1–2):67–76
-
(1991)
Hemoglobin
, vol.15
, Issue.1-2
, pp. 67-76
-
-
Oner, R.1
Agarwal, S.2
Dimovski, A.J.3
-
21
-
-
84863970352
-
RNA binding protein/RNA element interactions and the control of translation
-
COI: 1:CAS:528:DC%2BC38Xht1ChurbO, PID: 22708490
-
Pichon X, Wilson LA, Stoneley M et al (2012) RNA binding protein/RNA element interactions and the control of translation. Curr Protein Pept Sci 13(4):294–304
-
(2012)
Curr Protein Pept Sci
, vol.13
, Issue.4
, pp. 294-304
-
-
Pichon, X.1
Wilson, L.A.2
Stoneley, M.3
-
22
-
-
77950243975
-
The h subunit of eIF3 promotes reinitiation competence during translation of mRNAs harboring upstream open reading frames
-
COI: 1:CAS:528:DC%2BC3cXktlOks7g%3D, PID: 20179149
-
Roy B, Vaughn JN, Kim BH et al (2010) The h subunit of eIF3 promotes reinitiation competence during translation of mRNAs harboring upstream open reading frames. RNA 16(4):748–761
-
(2010)
RNA
, vol.16
, Issue.4
, pp. 748-761
-
-
Roy, B.1
Vaughn, J.N.2
Kim, B.H.3
-
23
-
-
33645875031
-
Downstream control of upstream open reading frames
-
COI: 1:CAS:528:DC%2BD28XjvFeitLo%3D, PID: 16618802
-
Sachs MS, Geballe AP (2006) Downstream control of upstream open reading frames. Genes Dev 20(8):915–921
-
(2006)
Genes Dev
, vol.20
, Issue.8
, pp. 915-921
-
-
Sachs, M.S.1
Geballe, A.P.2
-
24
-
-
84884887844
-
A perspective on mammalian upstream open reading frame function
-
COI: 1:CAS:528:DC%2BC3sXhtFaktbvP, PID: 23624144
-
Somers J, Pöyry T, Willis AE (2013) A perspective on mammalian upstream open reading frame function. Int J Biochem Cell Biol 45(8):1690–1700
-
(2013)
Int J Biochem Cell Biol
, vol.45
, Issue.8
, pp. 1690-1700
-
-
Somers, J.1
Pöyry, T.2
Willis, A.E.3
-
25
-
-
78649375395
-
Translational regulation of gene expression during conditions of cell stress
-
COI: 1:CAS:528:DC%2BC3cXhtlCjtr7K, PID: 20965418
-
Spriggs KA, Bushell M, Willis AE (2010) Translational regulation of gene expression during conditions of cell stress. Mol Cell 40(2):228–237
-
(2010)
Mol Cell
, vol.40
, Issue.2
, pp. 228-237
-
-
Spriggs, K.A.1
Bushell, M.2
Willis, A.E.3
-
26
-
-
84899659118
-
The F-BAR protein PSTPIP1 controls extracellular matrix degradation and filopodia formation in macrophages
-
COI: 1:CAS:528:DC%2BC2cXnvFWlsL4%3D, PID: 24421327
-
Starnes TW, Bennin DA, Bing X et al (2014) The F-BAR protein PSTPIP1 controls extracellular matrix degradation and filopodia formation in macrophages. Blood 123(17):2703–2714
-
(2014)
Blood
, vol.123
, Issue.17
, pp. 2703-2714
-
-
Starnes, T.W.1
Bennin, D.A.2
Bing, X.3
-
27
-
-
59149083659
-
Loss-of-function mutations of an inhibitory upstream ORF in the human hairless transcript cause Marie Unna hereditary hypotrichosis
-
COI: 1:CAS:528:DC%2BD1MXhtVyjtA%3D%3D, PID: 19122663
-
Wen Y, Liu Y, Xu Y et al (2009) Loss-of-function mutations of an inhibitory upstream ORF in the human hairless transcript cause Marie Unna hereditary hypotrichosis. Nat Genet 41(2):228–233
-
(2009)
Nat Genet
, vol.41
, Issue.2
, pp. 228-233
-
-
Wen, Y.1
Liu, Y.2
Xu, Y.3
-
28
-
-
84977874899
-
The regulatory potential of upstream open reading frames in eukaryotic gene expression
-
COI: 1:CAS:528:DC%2BC2cXhvVSjsLjO, PID: 24995549
-
Wethmar K (2014) The regulatory potential of upstream open reading frames in eukaryotic gene expression. Wiley Interdiscip Rev RNA 5(6):765–768
-
(2014)
Wiley Interdiscip Rev RNA
, vol.5
, Issue.6
, pp. 765-768
-
-
Wethmar, K.1
-
29
-
-
77957195626
-
Upstream open reading frames: molecular switches in (patho) physiology
-
COI: 1:CAS:528:DC%2BC3cXhtl2lu7vI, PID: 20726009
-
Wethmar K, Smink JJ, Leutz A (2010) Upstream open reading frames: molecular switches in (patho) physiology. BioEssays 32(10):885–893
-
(2010)
BioEssays
, vol.32
, Issue.10
, pp. 885-893
-
-
Wethmar, K.1
Smink, J.J.2
Leutz, A.3
|