-
1
-
-
79960923273
-
Pseudomonas aeruginosa: All roads lead to resistance
-
CrossRef PubMed
-
Breidenstein, E.B., de la Fuente-Nunez, C. and Hancock, R.E. (2011) Pseudomonas aeruginosa: all roads lead to resistance. Trends Microbiol 19, 419-426 CrossRef PubMed
-
(2011)
Trends Microbiol
, vol.19
, pp. 419-426
-
-
Breidenstein, E.B.1
De La Fuente-Nunez, C.2
Hancock, R.E.3
-
2
-
-
84891674459
-
Control of KirBac3.1 potassium channel gating at the interface between cytoplasmic domains
-
CrossRef PubMed
-
Zubcevic, L., Bavro, V.N., Muniz, J.R., Schmidt, M.R., Wang, S., De Zorzi, R., Venien-Bryan, C., Sansom, M.S., Nichols, C.G. and Tucker, S.J. (2014) Control of KirBac3.1 potassium channel gating at the interface between cytoplasmic domains. J. Biol. Chem. 289, 143-151 CrossRef PubMed
-
(2014)
J. Biol. Chem.
, vol.289
, pp. 143-151
-
-
Zubcevic, L.1
Bavro, V.N.2
Muniz, J.R.3
Schmidt, M.R.4
Wang, S.5
De Zorzi, R.6
Venien-Bryan, C.7
Sansom, M.S.8
Nichols, C.G.9
Tucker, S.J.10
-
3
-
-
84893516082
-
Dynamics transitions at the outer vestibule of the KcsA potassium channel during gating
-
CrossRef PubMed
-
Raghuraman, H., Islam, S.M., Mukherjee, S., Roux, B. and Perozo, E. (2014) Dynamics transitions at the outer vestibule of the KcsA potassium channel during gating. Proc. Natl. Acad. Sci. U.S.A. 111, 1831-1836 CrossRef PubMed
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 1831-1836
-
-
Raghuraman, H.1
Islam, S.M.2
Mukherjee, S.3
Roux, B.4
Perozo, E.5
-
4
-
-
0034907678
-
Computer simulation of the rough lipopolysaccharide membrane of Pseudomonas aeruginosa
-
CrossRef PubMed
-
Lins, R.D. and Straatsma, T.P. (2001) Computer simulation of the rough lipopolysaccharide membrane of Pseudomonas aeruginosa. Biophys. J. 81, 1037-1046 CrossRef PubMed
-
(2001)
Biophys. J.
, vol.81
, pp. 1037-1046
-
-
Lins, R.D.1
Straatsma, T.P.2
-
5
-
-
84901981469
-
E. coli outer membrane and interactions with OmpLA
-
CrossRef PubMed
-
Wu, E.L., Fleming, P.J., Yeom, M.S., Widmalm, G., Klauda, J.B., Fleming, K.G. and Im, W. (2014) E. coli outer membrane and interactions with OmpLA. Biophys. J. 106, 2493-2502 CrossRef PubMed
-
(2014)
Biophys. J.
, vol.106
, pp. 2493-2502
-
-
Wu, E.L.1
Fleming, P.J.2
Yeom, M.S.3
Widmalm, G.4
Klauda, J.B.5
Fleming, K.G.6
Im, W.7
-
6
-
-
36048971123
-
Structure of outer membrane protein G by solution NMR spectroscopy
-
CrossRef PubMed
-
Liang, B. and Tamm, L.K. (2007) Structure of outer membrane protein G by solution NMR spectroscopy. Proc. Natl. Acad. Sci. U.S.A. 104, 16140-16145 CrossRef PubMed
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 16140-16145
-
-
Liang, B.1
Tamm, L.K.2
-
7
-
-
80655149462
-
Structural basis for the interaction of lipopolysaccharide with outer membrane protein H (OprH) from Pseudomonas aeruginosa
-
CrossRef PubMed
-
Edrington, T.C., Kintz, E., Goldberg, J.B. and Tamm, L.K. (2011) Structural basis for the interaction of lipopolysaccharide with outer membrane protein H (OprH) from Pseudomonas aeruginosa. J. Biol. Chem. 286, 39211-39223 CrossRef PubMed
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 39211-39223
-
-
Edrington, T.C.1
Kintz, E.2
Goldberg, J.B.3
Tamm, L.K.4
-
8
-
-
72949109740
-
Structure of the outer membrane complex of a type IV secretion system
-
CrossRef PubMed
-
Chandran, V., Fronzes, R., Duquerroy, S., Cronin, N., Navaza, J. and Waksman, G. (2009) Structure of the outer membrane complex of a type IV secretion system. Nature 462, 1011-1015 CrossRef PubMed
-
(2009)
Nature
, vol.462
, pp. 1011-1015
-
-
Chandran, V.1
Fronzes, R.2
Duquerroy, S.3
Cronin, N.4
Navaza, J.5
Waksman, G.6
-
9
-
-
84863617034
-
Structural basis for activation of an integral membrane protease by lipopolysaccharide
-
CrossRef PubMed
-
Eren, E. and van den Berg, B. (2012) Structural basis for activation of an integral membrane protease by lipopolysaccharide. J. Biol. Chem. 287, 23971-23976 CrossRef PubMed
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 23971-23976
-
-
Eren, E.1
Van Den Berg, B.2
-
10
-
-
46049091548
-
Crystal structure of the outer membrane protein OpdK from Pseudomonas aeruginosa
-
CrossRef PubMed
-
Biswas, S., Mohammad, M.M., Movileanu, L. and van den Berg, B. (2008) Crystal structure of the outer membrane protein OpdK from Pseudomonas aeruginosa. Structure 16, 1027-1035 CrossRef PubMed
-
(2008)
Structure
, vol.16
, pp. 1027-1035
-
-
Biswas, S.1
Mohammad, M.M.2
Movileanu, L.3
Van Den Berg, B.4
-
11
-
-
84856927958
-
Ion binding and internal hydration in the multidrug resistance secondary active transporter NorM investigated by molecular dynamics simulations
-
CrossRef PubMed
-
Vanni, S., Campomanes, P., Marcia, M. and Rothlisberger, U. (2012) Ion binding and internal hydration in the multidrug resistance secondary active transporter NorM investigated by molecular dynamics simulations. Biochemistry 51, 1281-1287 CrossRef PubMed
-
(2012)
Biochemistry
, vol.51
, pp. 1281-1287
-
-
Vanni, S.1
Campomanes, P.2
Marcia, M.3
Rothlisberger, U.4
-
12
-
-
77958596325
-
Structure of a cation-bound multidrug and toxic compound extrusion transporter
-
CrossRef PubMed
-
He, X., Szewczyk, P., Karyakin, A., Evin, M., Hong, W.X., Zhang, Q. and Chang, G. (2010) Structure of a cation-bound multidrug and toxic compound extrusion transporter. Nature 467, 991-994 CrossRef PubMed
-
(2010)
Nature
, vol.467
, pp. 991-994
-
-
He, X.1
Szewczyk, P.2
Karyakin, A.3
Evin, M.4
Hong, W.X.5
Zhang, Q.6
Chang, G.7
-
13
-
-
84904541300
-
The NorM MATE transporter from N. gonorrhoeae: Insights into drug and ion binding from atomistic molecular dynamics simulations
-
CrossRef PubMed
-
Leung, Y.M., Holdbrook, D.A., Piggot, T.J. and Khalid, S. (2014) The NorM MATE transporter from N. gonorrhoeae: insights into drug and ion binding from atomistic molecular dynamics simulations. Biophys. J. 107, 460-468 CrossRef PubMed
-
(2014)
Biophys. J.
, vol.107
, pp. 460-468
-
-
Leung, Y.M.1
Holdbrook, D.A.2
Piggot, T.J.3
Khalid, S.4
-
14
-
-
84873431135
-
Structures of a Na + -coupled, substrate-bound MATE multidrug transporter
-
CrossRef PubMed
-
Lu, M., Symersky, J., Radchenko, M., Koide, A., Guo, Y., Nie, R. and Koide, S. (2013) Structures of a Na + -coupled, substrate-bound MATE multidrug transporter. Proc. Natl. Acad. Sci. U.S.A. 110, 2099-2104 CrossRef PubMed
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 2099-2104
-
-
Lu, M.1
Symersky, J.2
Radchenko, M.3
Koide, A.4
Guo, Y.5
Nie, R.6
Koide, S.7
-
15
-
-
0347479229
-
Molecular basis of bacterial outer membrane permeability revisited
-
CrossRef PubMed
-
Nikaido, H. (2003) Molecular basis of bacterial outer membrane permeability revisited. Microbiol. Mol. Biol. Rev. 67, 593-656 CrossRef PubMed
-
(2003)
Microbiol. Mol. Biol. Rev.
, vol.67
, pp. 593-656
-
-
Nikaido, H.1
-
16
-
-
0033932639
-
beta-Barrel membrane proteins
-
CrossRef PubMed
-
Schulz, G.E. (2000) beta-Barrel membrane proteins. Curr. Opin. Struct. Biol. 10, 443-447 CrossRef PubMed
-
(2000)
Curr. Opin. Struct. Biol.
, vol.10
, pp. 443-447
-
-
Schulz, G.E.1
-
17
-
-
0033942874
-
Structure and function of bacterial outer membrane proteins: Barrels in a nutshell
-
CrossRef PubMed
-
Koebnik, R., Locher, K.P. and Van Gelder, P. (2000) Structure and function of bacterial outer membrane proteins: barrels in a nutshell. Mol. Microbiol. 37, 239-253 CrossRef PubMed
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 239-253
-
-
Koebnik, R.1
Locher, K.P.2
Van Gelder, P.3
-
18
-
-
64649088018
-
Outer membrane permeability and antibiotic resistance
-
CrossRef PubMed
-
Delcour, A.H. (2009) Outer membrane permeability and antibiotic resistance. Biochim. Biophys. Acta 1794, 808-816 CrossRef PubMed
-
(2009)
Biochim. Biophys. Acta
, vol.1794
, pp. 808-816
-
-
Delcour, A.H.1
-
19
-
-
84867155796
-
Structure, function and binding selectivity and sterof siderophore-iron outer membrane transporters
-
CrossRef PubMed
-
Schalk, I.J., Mislin, G.L. and Brillet, K. (2012) Structure, function and binding selectivity and sterof siderophore-iron outer membrane transporters. Curr. Top. Membr. 69, 37-66 CrossRef PubMed
-
(2012)
Curr. Top. Membr.
, vol.69
, pp. 37-66
-
-
Schalk, I.J.1
Mislin, G.L.2
Brillet, K.3
-
20
-
-
0036403720
-
Function of pseudomonas porins in uptake and efflux
-
CrossRef PubMed
-
Hancock, R.E. and Brinkman, F.S. (2002) Function of pseudomonas porins in uptake and efflux. Annu. Rev. Microbiol. 56, 17-38 CrossRef PubMed
-
(2002)
Annu. Rev. Microbiol.
, vol.56
, pp. 17-38
-
-
Hancock, R.E.1
Brinkman, F.S.2
-
21
-
-
0025146217
-
Protein D2 channel of the Pseudomonas aeruginosa outer membrane has a binding site for basic amino acids and peptides
-
PubMed
-
Trias, J. and Nikaido, H. (1990) Protein D2 channel of the Pseudomonas aeruginosa outer membrane has a binding site for basic amino acids and peptides. J. Biol. Chem. 265, 15680-15684 PubMed
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 15680-15684
-
-
Trias, J.1
Nikaido, H.2
-
22
-
-
84876924253
-
Toward understanding the outer membrane uptake of small molecules by Pseudomonas aeruginosa
-
CrossRef PubMed
-
Eren, E., Parkin, J., Adelanwa, A., Cheneke, B., Movileanu, L., Khalid, S. and van den Berg, B. (2013) Toward understanding the outer membrane uptake of small molecules by Pseudomonas aeruginosa. J. Biol. Chem. 288, 12042-12053 CrossRef PubMed
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 12042-12053
-
-
Eren, E.1
Parkin, J.2
Adelanwa, A.3
Cheneke, B.4
Movileanu, L.5
Khalid, S.6
Van Den Berg, B.7
-
23
-
-
80855139866
-
Electroporation of the E. coli and S. aureus membranes: Molecular dynamics simulations of complex bacterial membranes
-
CrossRef PubMed
-
Piggot, T.J., Holdbrook, D.A. and Khalid, S. (2011) Electroporation of the E. coli and S. aureus membranes: molecular dynamics simulations of complex bacterial membranes. J. Phys. Chem. B. 115, 13381-13388 CrossRef PubMed
-
(2011)
J. Phys. Chem. B.
, vol.115
, pp. 13381-13388
-
-
Piggot, T.J.1
Holdbrook, D.A.2
Khalid, S.3
-
24
-
-
84870233517
-
Conformational dynamics and membrane interactions of the E. coli outer membrane protein FecA: A molecular dynamics simulation study
-
CrossRef PubMed
-
Piggot, T.J., Holdbrook, D.A. and Khalid, S. (2013) Conformational dynamics and membrane interactions of the E. coli outer membrane protein FecA: a molecular dynamics simulation study. Biochim. Biophys. Acta 1828, 284-293 CrossRef PubMed
-
(2013)
Biochim. Biophys. Acta
, vol.1828
, pp. 284-293
-
-
Piggot, T.J.1
Holdbrook, D.A.2
Khalid, S.3
-
25
-
-
84870295542
-
Stability and membrane interactions of an autotransport protein: MD simulations of the Hia translocator domain in a complex membrane environment
-
CrossRef PubMed
-
Holdbrook, D.A., Piggot, T.J., Sansom, M.S. and Khalid, S. (2013) Stability and membrane interactions of an autotransport protein: MD simulations of the Hia translocator domain in a complex membrane environment. Biochim. Biophys. Acta 1828, 715-723 CrossRef PubMed
-
(2013)
Biochim. Biophys. Acta
, vol.1828
, pp. 715-723
-
-
Holdbrook, D.A.1
Piggot, T.J.2
Sansom, M.S.3
Khalid, S.4
-
26
-
-
84890812430
-
Dual-fluorescence L-amino acid reports insertion and orientation of melittin peptide in cell membranes
-
CrossRef PubMed
-
Postupalenko, V.Y., Zamotaiev, O.M., Shvadchak, V.V., Strizhak, A.V., Pivovarenko, V.G., Klymchenko, A.S. and Mely, Y. (2013) Dual-fluorescence L-amino acid reports insertion and orientation of melittin peptide in cell membranes. Bioconjug. Chem. 24, 1998-2007 CrossRef PubMed
-
(2013)
Bioconjug. Chem.
, vol.24
, pp. 1998-2007
-
-
Postupalenko, V.Y.1
Zamotaiev, O.M.2
Shvadchak, V.V.3
Strizhak, A.V.4
Pivovarenko, V.G.5
Klymchenko, A.S.6
Mely, Y.7
-
27
-
-
0034091671
-
Protein-induced membrane disorder: A molecular dynamics study of melittin in a dipalmitoylphosphatidylcholine bilayer
-
CrossRef PubMed
-
Bachar, M. and Becker, O.M. (2000) Protein-induced membrane disorder: a molecular dynamics study of melittin in a dipalmitoylphosphatidylcholine bilayer. Biophys. J. 78, 1359-1375 CrossRef PubMed
-
(2000)
Biophys. J.
, vol.78
, pp. 1359-1375
-
-
Bachar, M.1
Becker, O.M.2
-
28
-
-
84887066587
-
Free energy barrier for melittin reorientation from a membrane-bound state to a transmembrane state
-
CrossRef PubMed
-
Irudayam, S.J., Pobandt, T. and Berkowitz, M.L. (2013) Free energy barrier for melittin reorientation from a membrane-bound state to a transmembrane state. J. Phys. Chem. B 117, 13457-13463 CrossRef PubMed
-
(2013)
J. Phys. Chem. B
, vol.117
, pp. 13457-13463
-
-
Irudayam, S.J.1
Pobandt, T.2
Berkowitz, M.L.3
-
29
-
-
84855853473
-
Investigation of model membrane disruption mechanism by melittin using pulse electron paramagnetic resonance spectroscopy and cryogenic transmission electron microscopy
-
CrossRef PubMed
-
Gordon-Grossman, M., Zimmermann, H., Wolf, S.G., Shai, Y. and Goldfarb, D. (2012) Investigation of model membrane disruption mechanism by melittin using pulse electron paramagnetic resonance spectroscopy and cryogenic transmission electron microscopy. J. Phys. Chem. B. 116, 179-188 CrossRef PubMed
-
(2012)
J. Phys. Chem. B.
, vol.116
, pp. 179-188
-
-
Gordon-Grossman, M.1
Zimmermann, H.2
Wolf, S.G.3
Shai, Y.4
Goldfarb, D.5
-
30
-
-
84934435433
-
The Martini coarse-grained force field
-
CrossRef PubMed
-
Periole, X. and Marrink, S.J. (2013) The Martini coarse-grained force field. Methods Mol. Biol. 924, 533-565 CrossRef PubMed
-
(2013)
Methods Mol. Biol.
, vol.924
, pp. 533-565
-
-
Periole, X.1
Marrink, S.J.2
-
31
-
-
84876890599
-
Reduced lateral mobility of lipids and proteins in crowded membranes
-
CrossRef PubMed
-
Goose, J.E. and Sansom, M.S. (2013) Reduced lateral mobility of lipids and proteins in crowded membranes. PLoS Comput. Biol. 9, e1003033 CrossRef PubMed
-
(2013)
PLoS Comput. Biol.
, vol.9
-
-
Goose, J.E.1
Sansom, M.S.2
-
32
-
-
84864880937
-
Characterization of the motion of membrane proteins using high-speed atomic force microscopy
-
CrossRef PubMed
-
Casuso, I., Khao, J., Chami, M., Paul-Gilloteaux, P., Husain, M., Duneau, J.P., Stahlberg, H., Sturgis, J.N. and Scheuring, S. (2012) Characterization of the motion of membrane proteins using high-speed atomic force microscopy. Nat. Nanotechnol. 7, 525-529 CrossRef PubMed
-
(2012)
Nat. Nanotechnol.
, vol.7
, pp. 525-529
-
-
Casuso, I.1
Khao, J.2
Chami, M.3
Paul-Gilloteaux, P.4
Husain, M.5
Duneau, J.P.6
Stahlberg, H.7
Sturgis, J.N.8
Scheuring, S.9
-
33
-
-
41449119304
-
Coarse-grained MD simulations of membrane protein-bilayer self-assembly
-
CrossRef PubMed
-
Scott, K.A., Bond, P.J., Ivetac, A., Chetwynd, A.P., Khalid, S. and Sansom, M.S. (2008) Coarse-grained MD simulations of membrane protein-bilayer self-assembly. Structure 16, 621-630 CrossRef PubMed
-
(2008)
Structure
, vol.16
, pp. 621-630
-
-
Scott, K.A.1
Bond, P.J.2
Ivetac, A.3
Chetwynd, A.P.4
Khalid, S.5
Sansom, M.S.6
-
34
-
-
77953101439
-
Membrane proteins diffuse as dynamic complexes with lipids
-
CrossRef PubMed
-
Niemela, P.S., Miettinen, M.S., Monticelli, L., Hammaren, H., Bjelkmar, P., Murtola, T., Lindahl, E. and Vattulainen, I. (2010) Membrane proteins diffuse as dynamic complexes with lipids. J. Am. Chem. Soc. 132, 7574-7575 CrossRef PubMed
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 7574-7575
-
-
Niemela, P.S.1
Miettinen, M.S.2
Monticelli, L.3
Hammaren, H.4
Bjelkmar, P.5
Murtola, T.6
Lindahl, E.7
Vattulainen, I.8
|