메뉴 건너뛰기




Volumn 1107, Issue , 2014, Pages 1-14

Introduction to microRNAs in biological systems

Author keywords

Biogenesis; Genome; MicroRNA; RNAi

Indexed keywords

MICRORNA;

EID: 84934444114     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-748-8_1     Document Type: Article
Times cited : (47)

References (75)
  • 1
    • 52449115337 scopus 로고    scopus 로고
    • MicroRNAs in development and disease
    • Erson A, Petty E. (2008) MicroRNAs in development and disease. Clin Genet 74:296-306
    • (2008) Clin Genet , vol.74 , pp. 296-306
    • Erson, A.1    Petty, E.2
  • 2
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: Target recognition and regulatory functions
    • Bartel DP. (2009) MicroRNAs: Target recognition and regulatory functions. Cell 136:215-233
    • (2009) Cell , vol.136 , pp. 215-233
    • Bartel, D.P.1
  • 3
    • 0027751663 scopus 로고
    • The C. Elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • Lee RC, Feinbaum RL, Ambros V. (1993) The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75:843-854
    • (1993) Cell , vol.75 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 4
    • 0027730383 scopus 로고
    • Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. Elegans
    • Wightman B, Ha I, Ruvkun G. (1993) Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans. Cell 75: 855-862
    • (1993) Cell , vol.75 , pp. 855-862
    • Wightman, B.1    Ha, I.2    Ruvkun, G.3
  • 5
    • 51449085579 scopus 로고    scopus 로고
    • Origins and evolution of eukaryotic RNA interference
    • Shabalina SA, Koonin EV. (2008) Origins and evolution of eukaryotic RNA interference. Trends Ecol Evol 23:578-587
    • (2008) Trends Ecol Evol , vol.23 , pp. 578-587
    • Shabalina, S.A.1    Koonin, E.V.2
  • 7
    • 84857097177 scopus 로고    scopus 로고
    • RNA-guided genetic silencing systems in bacteria and archaea
    • Wiedenheft B, Sternberg SH, Doudna JA. (2012) RNA-guided genetic silencing systems in bacteria and archaea. Nature 482:331-338
    • (2012) Nature , vol.482 , pp. 331-338
    • Wiedenheft, B.1    Sternberg, S.H.2    Doudna, J.A.3
  • 8
    • 84859716681 scopus 로고    scopus 로고
    • Identifi cation and characterization of small RNAs in the hyperthermophilic archaeon Sulfolobus solfataricus
    • Xu N, Li Y, Zhao YT, Guo L, Fang YY, Zhao JH, Wang XJ, Huang L, Guo HS. (2012) Identifi cation and characterization of small RNAs in the hyperthermophilic archaeon Sulfolobus solfataricus. PLoS One 7:e35306
    • (2012) PLoS One , vol.7
    • Xu, N.1    Li, Y.2    Zhao, Y.T.3    Guo, L.4    Fang, Y.Y.5    Zhao, J.H.6    Wang, X.J.7    Huang, L.8    Guo, H.S.9
  • 10
    • 79955379930 scopus 로고    scopus 로고
    • Vive la difference: Biogenesis and evolution of microRNAs in plants and animals
    • Axtell MJ, Westholm JO, Lai EC. (2011) Vive la difference: Biogenesis and evolution of microRNAs in plants and animals. Genome Biol 12:221
    • (2011) Genome Biol , vol.12 , pp. 221
    • Axtell, M.J.1    Westholm, J.O.2    Lai, E.C.3
  • 11
    • 34250729886 scopus 로고    scopus 로고
    • Origin and evolution of human microRNAs from transposable elements
    • Piriyapongsa J, Mariño-Ramírez L, Jordan I. (2007) Origin and evolution of human microRNAs from transposable elements. Genetics 176:1323-1337
    • (2007) Genetics , vol.176 , pp. 1323-1337
    • Piriyapongsa, J.1    Mariño-Ramírez, L.2    Jordan, I.3
  • 12
    • 42449099982 scopus 로고    scopus 로고
    • Dual coding of siRNAs and microRNAs by plant transposable elements
    • Piriyapongsa J, Jordan IK. (2008) Dual coding of siRNAs and microRNAs by plant transposable elements. RNA 14:814-821
    • (2008) RNA , vol.14 , pp. 814-821
    • Piriyapongsa, J.1    Jordan, I.K.2
  • 13
    • 0037072660 scopus 로고    scopus 로고
    • Small RNAs correspond to centromere heterochromatic repeats
    • Reinhart BJ, Bartel DP. (2002) Small RNAs correspond to centromere heterochromatic repeats. Science 297:1831
    • (2002) Science , vol.297 , pp. 1831
    • Reinhart, B.J.1    Bartel, D.P.2
  • 14
    • 6344281172 scopus 로고    scopus 로고
    • Identifi cation of mammalian microRNA host genes and transcription units
    • Rodriguez A, Griffiths-Jones S, Ashurst J, Bradley A. (2004) Identifi cation of mammalian microRNA host genes and transcription units. Genome Res 14:1902-1910
    • (2004) Genome Res , vol.14 , pp. 1902-1910
    • Rodriguez, A.1    Griffiths-Jones, S.2    Ashurst, J.3    Bradley, A.4
  • 16
    • 79551585565 scopus 로고    scopus 로고
    • Expression patterns of intronic microRNAs in Caenorhabditis elegans
    • Isik M, Korswagen HC, Berezikov E. (2010) Expression patterns of intronic microRNAs in Caenorhabditis elegans. Silence 1:5
    • (2010) Silence , vol.1 , pp. 5
    • Isik, M.1    Korswagen, H.C.2    Berezikov, E.3
  • 17
    • 0035934228 scopus 로고    scopus 로고
    • Identifi cation and characterization of human BIC, a gene on chromosome 21 that encodes a noncoding RNA
    • Tam W. (2001) Identifi cation and characterization of human BIC, a gene on chromosome 21 that encodes a noncoding RNA. Gene 274: 157-167
    • (2001) Gene , vol.274 , pp. 157-167
    • Tam, W.1
  • 21
    • 75549092303 scopus 로고    scopus 로고
    • TransmiR: A transcription factor-microRNA regulation database
    • Wang J, Lu M, Qiu C, Cui Q. (2010) TransmiR: A transcription factor-microRNA regulation database. Nucleic Acids Res 38:D119-D122
    • (2010) Nucleic Acids Res , vol.38
    • Wang, J.1    Lu, M.2    Qiu, C.3    Cui, Q.4
  • 22
    • 59449100501 scopus 로고    scopus 로고
    • The miR-302-367 cluster as a potential stemness regulator in ESCs
    • Barroso-del Jesus A, Lucena-Aguilar G, Menendez P. (2009) The miR-302-367 cluster as a potential stemness regulator in ESCs. Cell Cycle 8:394-398
    • (2009) Cell Cycle , vol.8 , pp. 394-398
    • Barroso-del Jesus, A.1    Lucena-Aguilar, G.2    Menendez, P.3
  • 23
    • 84860386584 scopus 로고    scopus 로고
    • MicroRNAs and estrogen action
    • Klinge CM. (2012) microRNAs and estrogen action. Trends Endocrinol Metab 23:223-233
    • (2012) Trends Endocrinol Metab , vol.23 , pp. 223-233
    • Klinge, C.M.1
  • 24
    • 62449117918 scopus 로고    scopus 로고
    • MiR-34, SIRT1 and p53: The feedback loop
    • Yamakuchi M, Lowenstein CJ. (2009) MiR-34, SIRT1 and p53: The feedback loop. Cell Cycle 8:712-715
    • (2009) Cell Cycle , vol.8 , pp. 712-715
    • Yamakuchi, M.1    Lowenstein, C.J.2
  • 26
    • 84875375918 scopus 로고    scopus 로고
    • Inferring coregulation of transcription factors and microRNAs in breast cancer
    • doi: 10.1016/j.gene.2012.11.056
    • Wu JH, Sun YJ, Hsieh PH, Shieh GS. (2012) Inferring coregulation of transcription factors and microRNAs in breast cancer. Gene 518(1): 139-144. doi: 10.1016/j.gene.2012.11.056
    • (2012) Gene , vol.518 , Issue.1 , pp. 139-144
    • Wu, J.H.1    Sun, Y.J.2    Hsieh, P.H.3    Shieh, G.S.4
  • 31
    • 0035887005 scopus 로고    scopus 로고
    • Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C elegans
    • Ketting RF, Fischer SE, Bernstein E, Sijen T, Hannon GJ, Plasterk RH. (2001) Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes Dev 15:2654-2659
    • (2001) Genes Dev , vol.15 , pp. 2654-2659
    • Ketting, R.F.1    Fischer, S.E.2    Bernstein, E.3    Sijen, T.4    Hannon, G.J.5    Plasterk, R.H.6
  • 33
    • 58749113430 scopus 로고    scopus 로고
    • A threedimensional view of the molecular machinery of RNA interference
    • Jinek M, Doudna JA. (2009) A threedimensional view of the molecular machinery of RNA interference. Nature 457:405-412
    • (2009) Nature , vol.457 , pp. 405-412
    • Jinek, M.1    Doudna, J.A.2
  • 34
    • 84864953519 scopus 로고    scopus 로고
    • Argonaute identity defi nes the length of mature mammalian microRNAs
    • Juvvuna PK, Khandelia P, Lee LM, Makeyev EV. (2012) Argonaute identity defi nes the length of mature mammalian microRNAs. Nucleic Acids Res 40:6808-6820
    • (2012) Nucleic Acids Res , vol.40 , pp. 6808-6820
    • Juvvuna, P.K.1    Khandelia, P.2    Lee, L.M.3    Makeyev, E.V.4
  • 39
    • 84864391006 scopus 로고    scopus 로고
    • Terminal loop-mediated control of microRNA biogenesis
    • Choudhury NR, Michlewski G. (2012) Terminal loop-mediated control of microRNA biogenesis. Biochem Soc Trans 40:789-793
    • (2012) Biochem Soc Trans , vol.40 , pp. 789-793
    • Choudhury, N.R.1    Michlewski, G.2
  • 40
    • 4344637081 scopus 로고    scopus 로고
    • Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions
    • Kurihara Y, Watanabe Y. (2004) Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions. Proc Natl Acad Sci U S A 101:12753-12758
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 12753-12758
    • Kurihara, Y.1    Watanabe, Y.2
  • 43
    • 35348820533 scopus 로고    scopus 로고
    • Detection of let-7a microRNA by real-Time PCR in colorectal cancer: A single-centre experience from China
    • Fang W, Fang W, Lin C, Lin C, Zhang H, Zhang H, Qian J, Zhong L, Xu N. (2007) Detection of let-7a microRNA by real-Time PCR in colorectal cancer: A single-centre experience from China. J Int Med Res 35:716-723
    • (2007) J Int Med Res , vol.35 , pp. 716-723
    • Fang, W.1    Fang, W.2    Lin, C.3    Lin, C.4    Zhang, H.5    Zhang, H.6    Qian, J.7    Zhong, L.8    Xu, N.9
  • 44
    • 34247334843 scopus 로고    scopus 로고
    • Arabidopsis primary microRNA processing proteins HYL1 and DCL1 defi ne a nuclear body distinct from the Cajal body
    • Song L, Han MH, Lesicka J, Fedoroff N. (2007) Arabidopsis primary microRNA processing proteins HYL1 and DCL1 defi ne a nuclear body distinct from the Cajal body. Proc Natl Acad Sci U S A 104:5437-5442
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 5437-5442
    • Song, L.1    Han, M.H.2    Lesicka, J.3    Fedoroff, N.4
  • 45
    • 77149173174 scopus 로고    scopus 로고
    • Molecular mechanisms that funnel RNA precursors into endogenous smallinterfering RNA and microRNA biogenesis pathways in Drosophila
    • Miyoshi K, Miyoshi T, Hartig JV, Siomi H, Siomi MC. (2010) Molecular mechanisms that funnel RNA precursors into endogenous smallinterfering RNA and microRNA biogenesis pathways in Drosophila. RNA 16: 506-515
    • (2010) RNA , vol.16 , pp. 506-515
    • Miyoshi, K.1    Miyoshi, T.2    Hartig, J.V.3    Siomi, H.4    Siomi, M.C.5
  • 49
    • 34447097693 scopus 로고    scopus 로고
    • Intronic microRNA precursors that bypass Drosha processing
    • Ruby JG, Jan CH, Bartel DP. (2007) Intronic microRNA precursors that bypass Drosha processing. Nature 448:83-86
    • (2007) Nature , vol.448 , pp. 83-86
    • Ruby, J.G.1    Jan, C.H.2    Bartel, D.P.3
  • 50
    • 34447107760 scopus 로고    scopus 로고
    • The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila
    • Okamura K, Hagen JW, Duan H, Tyler DM, Lai EC. (2007) The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila. Cell 130:89-100
    • (2007) Cell , vol.130 , pp. 89-100
    • Okamura, K.1    Hagen, J.W.2    Duan, H.3    Tyler, D.M.4    Lai, E.C.5
  • 51
    • 84867620153 scopus 로고    scopus 로고
    • Mirtrons, an emerging class of atypical microRNA
    • Wiley
    • Curtis HJ, Sibley CR, Wood MJ. (2012) Mirtrons, an emerging class of atypical microRNA. Wiley Interdiscip Rev RNA 3:617-632
    • (2012) Interdiscip Rev RNA , vol.3 , pp. 617-632
    • Curtis, H.J.1    Sibley, C.R.2    Wood, M.J.3
  • 52
    • 36849048778 scopus 로고    scopus 로고
    • Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression
    • Diederichs S, Haber DA. (2007) Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression. Cell 131:1097-1108
    • (2007) Cell , vol.131 , pp. 1097-1108
    • Diederichs, S.1    Haber, D.A.2
  • 53
    • 78649894176 scopus 로고    scopus 로고
    • Dicer-independent, Ago2-mediated microRNA biogenesis in vertebrates
    • Yang JS, Lai EC. (2010) Dicer-independent, Ago2-mediated microRNA biogenesis in vertebrates. Cell Cycle 9:4455-4460
    • (2010) Cell Cycle , vol.9 , pp. 4455-4460
    • Yang, J.S.1    Lai, E.C.2
  • 55
    • 71549169628 scopus 로고    scopus 로고
    • Filtering of deep sequencing data reveals the existence of abundant Dicerdependent small RNAs derived from tRNAs
    • Cole C, Sobala A, Lu C, Thatcher SR, Bowman A, Brown JW, Green PJ, Barton GJ, Hutvagner G. (2009) Filtering of deep sequencing data reveals the existence of abundant Dicerdependent small RNAs derived from tRNAs. RNA 15:2147-2160
    • (2009) RNA , vol.15 , pp. 2147-2160
    • Cole, C.1    Sobala, A.2    Lu, C.3    Thatcher, S.R.4    Bowman, A.5    Brown, J.W.6    Green, P.J.7    Barton, G.J.8    Hutvagner, G.9
  • 57
    • 1642374097 scopus 로고    scopus 로고
    • Specifi city of microRNA target selection in translational repression
    • Doench JG, Sharp PA. (2004) Specifi city of microRNA target selection in translational repression. Genes Dev 18:504-511
    • (2004) Genes Dev , vol.18 , pp. 504-511
    • Doench, J.G.1    Sharp, P.A.2
  • 58
    • 84861451595 scopus 로고    scopus 로고
    • The crystal structure of human Argonaute2
    • Schirle NT, MacRae IJ. (2012) The crystal structure of human Argonaute2. Science 336:1037-1040
    • (2012) Science , vol.336 , pp. 1037-1040
    • Schirle, N.T.1    MacRae, I.J.2
  • 60
    • 84867736206 scopus 로고    scopus 로고
    • IsomiRs-The overlooked repertoire in the dynamic microRNAome
    • Neilsen CT, Goodall GJ, Bracken CP. (2012) IsomiRs-The overlooked repertoire in the dynamic microRNAome. Trends Genet 28: 544-549
    • (2012) Trends Genet , vol.28 , pp. 544-549
    • Neilsen, C.T.1    Goodall, G.J.2    Bracken, C.P.3
  • 62
    • 84864052484 scopus 로고    scopus 로고
    • A novel vector-based method for exclusive overexpression of star-form micrornas
    • Qu B, Han X, Tang Y, Shen N. (2012) A novel vector-based method for exclusive overexpression of star-form microRNAs. PLoS One 7:e41504
    • (2012) PLoS One , vol.7
    • Qu, B.1    Han, X.2    Tang, Y.3    Shen, N.4
  • 63
    • 40349094597 scopus 로고    scopus 로고
    • MicroRNA-373 induces expression of genes with complementary promoter sequences
    • Place RF, Li LC, Pookot D, Noonan EJ, Dahiya R. (2008) MicroRNA-373 induces expression of genes with complementary promoter sequences. Proc Natl Acad Sci U S A 105:1608-1613
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 1608-1613
    • Place, R.F.1    Li, L.C.2    Pookot, D.3    Noonan, E.J.4    Dahiya, R.5
  • 65
    • 43449090367 scopus 로고    scopus 로고
    • MicroRNA-10a binds the 5′UTR of ribosomal protein mRNAs and enhances their translation
    • Orom UA, Nielsen FC, Lund AH. (2008) MicroRNA-10a binds the 5′UTR of ribosomal protein mRNAs and enhances their translation. Mol Cell 30:460-471
    • (2008) Mol Cell , vol.30 , pp. 460-471
    • Orom, U.A.1    Nielsen, F.C.2    Lund, A.H.3
  • 66
    • 84857784512 scopus 로고    scopus 로고
    • Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cells
    • Benhamed M, Herbig U, Ye T, Dejean A, Bischof O. (2012) Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cells. Nat Cell Biol 14:266-275
    • (2012) Nat Cell Biol , vol.14 , pp. 266-275
    • Benhamed, M.1    Herbig, U.2    Ye, T.3    Dejean, A.4    Bischof, O.5
  • 67
    • 46249092601 scopus 로고    scopus 로고
    • Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites
    • Sandberg R, Neilson JR, Sarma A, Sharp PA, Burge CB. (2008) Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites. Science 320:1643-1647
    • (2008) Science , vol.320 , pp. 1643-1647
    • Sandberg, R.1    Neilson, J.R.2    Sarma, A.3    Sharp, P.A.4    Burge, C.B.5
  • 68
    • 68749113985 scopus 로고    scopus 로고
    • Widespread shortening of 3′UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells
    • Mayr C, Bartel DP. (2009) Widespread shortening of 3′UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells. Cell 138:673-684
    • (2009) Cell , vol.138 , pp. 673-684
    • Mayr, C.1    Bartel, D.P.2
  • 69
    • 79955554179 scopus 로고    scopus 로고
    • Differential genome-wide profi ling of tandem 3′ UTRs among human breast cancer and normal cells by high-Throughput sequencing
    • Fu Y, Sun Y, Li Y, Li J, Rao X, Chen C, Xu A. (2011) Differential genome-wide profi ling of tandem 3′ UTRs among human breast cancer and normal cells by high-Throughput sequencing. Genome Res 21:741-747
    • (2011) Genome Res , vol.21 , pp. 741-747
    • Fu, Y.1    Sun, Y.2    Li, Y.3    Li, J.4    Rao, X.5    Chen, C.6    Xu, A.7
  • 70
    • 75749151680 scopus 로고    scopus 로고
    • MicroRNAs and cancer: New research developments and potential clinical applications
    • Erson AE, Petty EM. (2009) microRNAs and cancer: New research developments and potential clinical applications. Cancer Biol Ther 8:2317-2322
    • (2009) Cancer Biol Ther , vol.8 , pp. 2317-2322
    • Erson, A.E.1    Petty, E.M.2
  • 71
    • 73649139638 scopus 로고    scopus 로고
    • Global changes in processing of mRNA 3′ untranslated regions characterize clinically distinct cancer subtypes
    • Singh P, Alley TL, Wright SM, Kamdar S, Schott W, Wilpan RY, Mills KD, Graber JH. (2009) Global changes in processing of mRNA 3′ untranslated regions characterize clinically distinct cancer subtypes. Cancer Res 69: 9422-9430
    • (2009) Cancer Res , vol.69 , pp. 9422-9430
    • Singh, P.1    Alley, T.L.2    Wright, S.M.3    Kamdar, S.4    Schott, W.5    Wilpan, R.Y.6    Mills, K.D.7    Graber, J.H.8
  • 72
    • 84870581925 scopus 로고    scopus 로고
    • Estrogen-induced upregulation and 3′-UTR shortening of CDC6
    • Akman BH, Can T, Erson-Bensan AE. (2012) Estrogen-induced upregulation and 3′-UTR shortening of CDC6. Nucleic Acids Res 40: 10679-10688
    • (2012) Nucleic Acids Res , vol.40 , pp. 10679-10688
    • Akman, B.H.1    Can, T.2    Erson-Bensan, A.E.3
  • 73
    • 56049121431 scopus 로고    scopus 로고
    • MicroRNAmediated up-regulation of an alternatively polyadenylated variant of the mouse cytoplasmic {beta}-Actin gene
    • Ghosh T, Soni K, Scaria V, Halimani M, Bhattacharjee C, Pillai B. (2008) MicroRNAmediated up-regulation of an alternatively polyadenylated variant of the mouse cytoplasmic {beta}-Actin gene. Nucleic Acids Res 36:6318-6332
    • (2008) Nucleic Acids Res , vol.36 , pp. 6318-6332
    • Ghosh, T.1    Soni, K.2    Scaria, V.3    Halimani, M.4    Bhattacharjee, C.5    Pillai, B.6
  • 74
    • 79955035120 scopus 로고    scopus 로고
    • Pseudogenes: Pseudo-functional or key regulators in health and disease?
    • Pink RC, Wicks K, Caley DP, Punch EK, Jacobs L, Carter DR. (2011) Pseudogenes: Pseudo-functional or key regulators in health and disease? RNA 17:792-798
    • (2011) RNA , vol.17 , pp. 792-798
    • Pink, R.C.1    Wicks, K.2    Caley, D.P.3    Punch, E.K.4    Jacobs, L.5    Carter, D.R.6
  • 75
    • 77953957633 scopus 로고    scopus 로고
    • A codingindependent function of gene and pseudogene mRNAs regulates tumour biology
    • Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP. (2010) A codingindependent function of gene and pseudogene mRNAs regulates tumour biology. Nature 465:1033-1038
    • (2010) Nature , vol.465 , pp. 1033-1038
    • Poliseno, L.1    Salmena, L.2    Zhang, J.3    Carver, B.4    Haveman, W.J.5    Pandolfi, P.P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.