Traction microscopy to identify force modulation in subresolution adhesions

Nature Methods

Volumn 12, Issue 7, 2015, Pages 653-656

  Han, Sangyoon J ^a,b   Oak, Youbean ^a   Groisman, Alex ^c   Danuser, Gaudenz ^a,b  

^a HARVARD MEDICAL SCHOOL   (United States)

^b UNIVERSITY OF TEXAS SOUTHWESTERN MEDICAL CENTER   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADHESION; ALGORITHM; ARTICLE; COMPUTER PROGRAM; FORCE; MICROSCOPY; MODULATION; NOISE; PRIORITY JOURNAL; TRACTION MICROSCOPY; CELL ADHESION; CELL CULTURE; FLUORESCENCE MICROSCOPY; PROCEDURES; SOFTWARE;

CELL ADHESION; CELLS, CULTURED; MICROSCOPY, FLUORESCENCE; SOFTWARE;

EID: 84934437770     PISSN: 15487091     EISSN: 15487105     Source Type: Journal    
DOI: 10.1038/nmeth.3430     Document Type: Article

References (32)

1. Gardel, M.L. et al. J. Cell Biol. 183, 999-1005 (2008).
2. Discher, D.E., Janmey, P. & Wang, Y.L. Science 310, 1139-1143 (2005).
3. Munevar, S., Wang, Y. & Dembo, M. Biophys. J. 80, 1744-1757 (2001).
4. Gardel, M.L., Schneider, I.C., Aratyn-Schaus, Y. & Waterman, C.M. Annu. Rev. Cell Dev. Biol. 26, 315-333 (2010).
5. Stricker, J., Aratyn-Schaus, Y., Oakes, P.W. & Gardel, M.L. Biophys. J. 100, 2883-2893 (2011).
6. Dembo, M., Oliver, T., Ishihara, A. & Jacobson, K. Biophys. J. 70, 2008-2022 (1996).
7. Gutierrez, E. et al. PLoS ONE 6, e23807 (2011).
8. Westerweel, J., Dabiri, D. & Gharib, M. Exp. Fluids 23, 20-28 (1997).
9. Sabass, B., Gardel, M.L., Waterman, C.M. & Schwarz, U.S. Biophys. J. 94, 207-220 (2008).
10. Hansen, P.C. Rank-Deficient and Discrete Ill-Posed Problems: Numerical Aspects of Linear Inversion 99-133 (SIAM, Philadelphia, 1998).
11. Butler, J.P., Tolić-Nørrelykke, I.M., Fabry, B. & Fredberg, J.J. Am. J. Physiol. Cell Physiol. 282, C595-C605 (2002).
12. Dembo, M. & Wang, Y.L. Biophys. J. 76, 2307-2316 (1999).
13. Schwarz, U.S. et al. Biophys. J. 83, 1380-1394 (2002).
14. Beningo, K.A., Dembo, M., Kaverina, I., Small, J.V. & Wang, Y.L. J. Cell Biol. 153, 881-888 (2001).
15. Plotnikov, S.V., Pasapera, A.M., Sabass, B. & Waterman, C.M. Cell 151, 1513-1527 (2012).
16. Candes, E.J., Romberg, J. & Tao, T. IEEE Trans. Inf. Theory 52, 489-509 (2006).
17. Candes, E.J. & Romberg, J. Found. Comput. Math. 6, 227-254 (2006).
18. Parsons, J.T., Horwitz, A.R. & Schwartz, M.A. Nat. Rev. Mol. Cell Biol. 11, 633-643 (2010).
19. Gui, L. & Wereley, S.T. Exp. Fluids 32, 506-517 (2002).
20. Claerbout, J.F. & Muir, F. Geophysics 38, 826-844 (1973).
21. Candes, E.J. & Wakin, M.B. IEEE Signal Process. Mag. 25, 21-30 (2008).
22. Schäfer, C. et al. Cell Adh. Migr. 4, 215-225 (2010).
23. Ji, L. & Danuser, G. J. Microsc. 220, 150-167 (2005).
24. del Álamo, J.C. et al. PLoS ONE 8, e69850 (2013).
25. Landau, L.D. & Lifshitz, E.M. Theory of Elasticity 3rd edn. (Pergamon Press, 1986).
26. Bruckstein, A.M., Donoho, D.L. & Elad, M. SIAM Rev. 51, 34-81 (2009).
27. Scales, J.A., Gerztenkorn, A. & Treitel, S. J. Comput. Phys. 75, 314-333 (1988).
28. Aguet, F., Geissbühler, S., Märki, I., Lasser, T. & Unser, M. Opt. Express 17, 6829-6848 (2009).
29. Aguet, F., Antonescu, C.N., Mettlen, M., Schmid, S.L. & Danuser, G. Dev. Cell 26, 279-291 (2013).
30. Jaqaman, K. et al. Nat. Methods 5, 695-702 (2008).
31. Gutierrez, E. & Groisman, A. PLoS ONE 6, e25534 (2011).
32. Chazotte, B. Cold Spring Harb. Protoc. 2011, pdb.prot5554 (2011.).