-
1
-
-
77954239263
-
Biomarkers for Alzheimer's disease: Academic, industry and regulatory perspectives
-
10.1038/nrd3115 1:CAS:528:DC%2BC3cXotFeltLs%3D 20592748
-
Hampel H, Frank R, Broich K, Teipel SJ, Katz RG, Hardy J, et al. Biomarkers for Alzheimer's disease: academic, industry and regulatory perspectives. Nat Rev Drug Discov. 2010;9(7):560-74. doi: 10.1038/nrd3115.
-
(2010)
Nat Rev Drug Discov
, vol.9
, Issue.7
, pp. 560-574
-
-
Hampel, H.1
Frank, R.2
Broich, K.3
Teipel, S.J.4
Katz, R.G.5
Hardy, J.6
-
2
-
-
33947729229
-
Biomarkers of neurodegeneration for diagnosis and monitoring therapeutics
-
10.1038/nrd2176 1:CAS:528:DC%2BD2sXjs1SisL8%3D 17347655
-
Shaw LM, Korecka M, Clark CM, Lee VM, Trojanowski JQ. Biomarkers of neurodegeneration for diagnosis and monitoring therapeutics. Nat Rev Drug Discov. 2007;6(4):295-303. doi: 10.1038/nrd2176.
-
(2007)
Nat Rev Drug Discov
, vol.6
, Issue.4
, pp. 295-303
-
-
Shaw, L.M.1
Korecka, M.2
Clark, C.M.3
Lee, V.M.4
Trojanowski, J.Q.5
-
3
-
-
84937717957
-
Towards a classification of biomarkers of neuropsychiatric disease: From encompass to compass
-
Davis J, Maes M, Andreazza A, McGrath JJ, Tye SJ, Berk M. Towards a classification of biomarkers of neuropsychiatric disease: from encompass to compass. Mol Psychiatry. 2014. doi: 10.1038/mp.2014.139.
-
(2014)
Mol Psychiatry
-
-
Davis, J.1
Maes, M.2
Andreazza, A.3
McGrath, J.J.4
Tye, S.J.5
Berk, M.6
-
4
-
-
77958586852
-
What are biomarkers?
-
10.1097/COH.0b013e32833ed177 3078627 20978388
-
Strimbu K, Tavel JA. What are biomarkers? Curr Opin HIV AIDS. 2010;5(6):463-6. doi: 10.1097/COH.0b013e32833ed177.
-
(2010)
Curr Opin HIV AIDS
, vol.5
, Issue.6
, pp. 463-466
-
-
Strimbu, K.1
Tavel, J.A.2
-
5
-
-
84903908602
-
Alanine aminotransferase-old biomarker and new concept: A review
-
10.7150/ijms.8951 1:CAS:528:DC%2BC2cXhvVOjs7zF 4081315 25013373
-
Liu Z, Que S, Xu J, Peng T. Alanine aminotransferase-old biomarker and new concept: a review. Int J Med Sci. 2014;11(9):925-35. doi: 10.7150/ijms.8951.
-
(2014)
Int J Med Sci
, vol.11
, Issue.9
, pp. 925-935
-
-
Liu, Z.1
Que, S.2
Xu, J.3
Peng, T.4
-
6
-
-
79959767761
-
HOXC11-SRC-1 regulation of S100beta in cutaneous melanoma: New targets for the kinase inhibitor dasatinib
-
10.1038/bjc.2011.193
-
de Blacam C, Byrne C, Hughes E, McIlroy M, Bane F, Hill AD, et al. HOXC11-SRC-1 regulation of S100beta in cutaneous melanoma: new targets for the kinase inhibitor dasatinib. Br J Cancer. 2011;105(1):118-23. doi: 10.1038/bjc.2011.193.
-
(2011)
Br J Cancer
, vol.105
, Issue.1
, pp. 118-123
-
-
De Blacam, C.1
Byrne, C.2
Hughes, E.3
McIlroy, M.4
Bane, F.5
Hill, A.D.6
-
7
-
-
84906303775
-
Mechanisms underlying mutational signatures in human cancers
-
10.1038/nrg3729 1:CAS:528:DC%2BC2cXhtVOisb%2FF 24981601
-
Helleday T, Eshtad S, Nik-Zainal S. Mechanisms underlying mutational signatures in human cancers. Nat Rev Genet. 2014;15(9):585-98. doi: 10.1038/nrg3729.
-
(2014)
Nat Rev Genet
, vol.15
, Issue.9
, pp. 585-598
-
-
Helleday, T.1
Eshtad, S.2
Nik-Zainal, S.3
-
8
-
-
84880274942
-
DNA methylation-based biomarkers in bladder cancer
-
10.1038/nrurol.2013.89 1:CAS:528:DC%2BC3sXpsVyrtLk%3D 23628807
-
Kandimalla R, van Tilborg AA, Zwarthoff EC. DNA methylation-based biomarkers in bladder cancer. Nat Rev Urol. 2013;10(6):327-35. doi: 10.1038/nrurol.2013.89.
-
(2013)
Nat Rev Urol
, vol.10
, Issue.6
, pp. 327-335
-
-
Kandimalla, R.1
Van Tilborg, A.A.2
Zwarthoff, E.C.3
-
9
-
-
77956058729
-
Epigenetics and cardiovascular disease
-
10.1038/nrcardio.2010.104 1:CAS:528:DC%2BC3cXhtVGgtrfF 3075976 20603647
-
Ordovas JM, Smith CE. Epigenetics and cardiovascular disease. Nat Rev Cardiol. 2010;7(9):510-9. doi: 10.1038/nrcardio.2010.104.
-
(2010)
Nat Rev Cardiol
, vol.7
, Issue.9
, pp. 510-519
-
-
Ordovas, J.M.1
Smith, C.E.2
-
10
-
-
85039764762
-
Methylation of cell-free circulating DNA in the diagnosis of cancer
-
10.3389/fmolb.2015.00013 4428375 25988180
-
Warton K, Samimi G. Methylation of cell-free circulating DNA in the diagnosis of cancer. Front Mol Biosci. 2015;2:13. doi: 10.3389/fmolb.2015.00013.
-
(2015)
Front Mol Biosci
, vol.2
, pp. 13
-
-
Warton, K.1
Samimi, G.2
-
11
-
-
84922621952
-
Function and information content of DNA methylation
-
10.1038/nature14192 1:CAS:528:DC%2BC2MXpvV2mtw%3D%3D 25592537
-
Schubeler D. Function and information content of DNA methylation. Nature. 2015;517(7534):321-6. doi: 10.1038/nature14192.
-
(2015)
Nature
, vol.517
, Issue.7534
, pp. 321-326
-
-
Schubeler, D.1
-
12
-
-
33750370444
-
MicroRNA signatures in human cancers
-
10.1038/nrc1997 1:CAS:528:DC%2BD28XhtFWhs7fM 17060945
-
Calin GA, Croce CM. MicroRNA signatures in human cancers. Nat Rev Cancer. 2006;6(11):857-66. doi: 10.1038/nrc1997.
-
(2006)
Nat Rev Cancer
, vol.6
, Issue.11
, pp. 857-866
-
-
Calin, G.A.1
Croce, C.M.2
-
13
-
-
84883454644
-
MicroRNAs in liver disease
-
10.1038/nrgastro.2013.87 1:CAS:528:DC%2BC3sXhsVWqtrvN 4091636 23689081
-
Szabo G, Bala S. MicroRNAs in liver disease. Nat Rev Gastroenterol Hepatol. 2013;10(9):542-52. doi: 10.1038/nrgastro.2013.87.
-
(2013)
Nat Rev Gastroenterol Hepatol
, vol.10
, Issue.9
, pp. 542-552
-
-
Szabo, G.1
Bala, S.2
-
14
-
-
84899627656
-
Heart failure: Targeting miRNA pathology in heart disease
-
10.1038/nrd4311 24781545
-
Flemming A. Heart failure: targeting miRNA pathology in heart disease. Nat Rev Drug Discov. 2014;13(5):336. doi: 10.1038/nrd4311.
-
(2014)
Nat Rev Drug Discov
, vol.13
, Issue.5
, pp. 336
-
-
Flemming, A.1
-
15
-
-
84888615449
-
Regulatory role of miRNAs in polyamine gene expression in the prefrontal cortex of depressed suicide completers
-
10.1017/S1461145713000941 1:CAS:528:DC%2BC3sXhvVOisbbO 24025154
-
Lopez JP, Fiori LM, Gross JA, Labonte B, Yerko V, Mechawar N, et al. Regulatory role of miRNAs in polyamine gene expression in the prefrontal cortex of depressed suicide completers. Int J Neuropsychopharmacol. 2014;17(1):23-32. doi: 10.1017/S1461145713000941.
-
(2014)
Int J Neuropsychopharmacol
, vol.17
, Issue.1
, pp. 23-32
-
-
Lopez, J.P.1
Fiori, L.M.2
Gross, J.A.3
Labonte, B.4
Yerko, V.5
Mechawar, N.6
-
16
-
-
84904045942
-
MiR-1202 is a primate-specific and brain-enriched microRNA involved in major depression and antidepressant treatment
-
10.1038/nm.3582 1:CAS:528:DC%2BC2cXpsVamtr0%3D 4087015 24908571
-
Lopez JP, Lim R, Cruceanu C, Crapper L, Fasano C, Labonte B, et al. miR-1202 is a primate-specific and brain-enriched microRNA involved in major depression and antidepressant treatment. Nat Med. 2014;20(7):764-8. doi: 10.1038/nm.3582.
-
(2014)
Nat Med
, vol.20
, Issue.7
, pp. 764-768
-
-
Lopez, J.P.1
Lim, R.2
Cruceanu, C.3
Crapper, L.4
Fasano, C.5
Labonte, B.6
-
17
-
-
84896970969
-
Micro spies from the brain to the periphery: New clues from studies on microRNAs in neuropsychiatric disorders
-
10.3389/fncel.2014.00075 3949217 24653674
-
Maffioletti E, Tardito D, Gennarelli M, Bocchio-Chiavetto L. Micro spies from the brain to the periphery: new clues from studies on microRNAs in neuropsychiatric disorders. Front Cell Neurosci. 2014;8:75. doi: 10.3389/fncel.2014.00075.
-
(2014)
Front Cell Neurosci
, vol.8
, pp. 75
-
-
Maffioletti, E.1
Tardito, D.2
Gennarelli, M.3
Bocchio-Chiavetto, L.4
-
18
-
-
84859005549
-
Little things on which happiness depends: MicroRNAs as novel therapeutic targets for the treatment of anxiety and depression
-
10.1038/mp.2011.162 22182940
-
O'Connor RM, Dinan TG, Cryan JF. Little things on which happiness depends: microRNAs as novel therapeutic targets for the treatment of anxiety and depression. Mol Psychiatry. 2012;17(4):359-76. doi: 10.1038/mp.2011.162.
-
(2012)
Mol Psychiatry
, vol.17
, Issue.4
, pp. 359-376
-
-
O'Connor, R.M.1
Dinan, T.G.2
Cryan, J.F.3
-
19
-
-
81355142141
-
Non-coding RNAs in human disease
-
10.1038/nrg3074 1:CAS:528:DC%2BC3MXhsVyktrfL 22094949
-
Esteller M. Non-coding RNAs in human disease. Nat Rev Genet. 2011;12(12):861-74. doi: 10.1038/nrg3074.
-
(2011)
Nat Rev Genet
, vol.12
, Issue.12
, pp. 861-874
-
-
Esteller, M.1
-
20
-
-
84905503012
-
Therapeutic targeting of microRNAs: Current status and future challenges
-
10.1038/nrd4359 1:CAS:528:DC%2BC2cXhtFeqsL3J 25011539
-
Li Z, Rana TM. Therapeutic targeting of microRNAs: current status and future challenges. Nat Rev Drug Discov. 2014;13(8):622-38. doi: 10.1038/nrd4359.
-
(2014)
Nat Rev Drug Discov
, vol.13
, Issue.8
, pp. 622-638
-
-
Li, Z.1
Rana, T.M.2
-
21
-
-
84864126183
-
Emerging roles of non-coding RNAs in brain evolution, development, plasticity and disease
-
10.1038/nrn3234 1:CAS:528:DC%2BC38XhtVKnu7%2FE 3478095 22814587
-
Qureshi IA, Mehler MF. Emerging roles of non-coding RNAs in brain evolution, development, plasticity and disease. Nat Rev Neurosci. 2012;13(8):528-41. doi: 10.1038/nrn3234.
-
(2012)
Nat Rev Neurosci
, vol.13
, Issue.8
, pp. 528-541
-
-
Qureshi, I.A.1
Mehler, M.F.2
-
22
-
-
79955463135
-
Pharmacogenomics genes show varying perceptibility to microRNA regulation
-
10.1097/FPC.0b013e3283438865 1:CAS:528:DC%2BC3MXksFGqt78%3D 21499217
-
Rukov JL, Vinther J, Shomron N. Pharmacogenomics genes show varying perceptibility to microRNA regulation. Pharmacogenet Genomics. 2011;21(5):251-62. doi: 10.1097/FPC.0b013e3283438865.
-
(2011)
Pharmacogenet Genomics
, vol.21
, Issue.5
, pp. 251-262
-
-
Rukov, J.L.1
Vinther, J.2
Shomron, N.3
-
23
-
-
84904985459
-
Regulation of microRNA biogenesis
-
10.1038/nrm3838 1:CAS:528:DC%2BC2cXhtFGqu7nP 25027649
-
Ha M, Kim VN. Regulation of microRNA biogenesis. Nat Rev Mol Cell Biol. 2014;15(8):509-24. doi: 10.1038/nrm3838.
-
(2014)
Nat Rev Mol Cell Biol
, vol.15
, Issue.8
, pp. 509-524
-
-
Ha, M.1
Kim, V.N.2
-
24
-
-
84865789071
-
What comes first: Translational repression or mRNA degradation? the deepening mystery of microRNA function
-
10.1038/cr.2012.80 1:CAS:528:DC%2BC38XhtlWhs7bK 3434348 22613951
-
Hu W, Coller J. What comes first: translational repression or mRNA degradation? The deepening mystery of microRNA function. Cell Res. 2012;22(9):1322-4. doi: 10.1038/cr.2012.80.
-
(2012)
Cell Res
, vol.22
, Issue.9
, pp. 1322-1324
-
-
Hu, W.1
Coller, J.2
-
25
-
-
73949085491
-
Non-coding RNAs: Regulators of disease
-
10.1002/path.2638 1:CAS:528:DC%2BC3cXht1OnsLs%3D 19882673
-
Taft RJ, Pang KC, Mercer TR, Dinger M, Mattick JS. Non-coding RNAs: regulators of disease. J Pathol. 2010;220(2):126-39. doi: 10.1002/path.2638.
-
(2010)
J Pathol
, vol.220
, Issue.2
, pp. 126-139
-
-
Taft, R.J.1
Pang, K.C.2
Mercer, T.R.3
Dinger, M.4
Mattick, J.S.5
-
26
-
-
34248160438
-
Developmentally regulated piRNA clusters implicate MILI in transposon control
-
10.1126/science.1142612 1:CAS:528:DC%2BD2sXkvVWrsbk%3D 17446352
-
Aravin AA, Sachidanandam R, Girard A, Fejes-Toth K, Hannon GJ. Developmentally regulated piRNA clusters implicate MILI in transposon control. Science. 2007;316(5825):744-7. doi: 10.1126/science.1142612.
-
(2007)
Science
, vol.316
, Issue.5825
, pp. 744-747
-
-
Aravin, A.A.1
Sachidanandam, R.2
Girard, A.3
Fejes-Toth, K.4
Hannon, G.J.5
-
27
-
-
33947273235
-
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
-
10.1016/j.cell.2007.01.043 1:CAS:528:DC%2BD2sXkslGms70%3D 17346786
-
Brennecke J, Aravin AA, Stark A, Dus M, Kellis M, Sachidanandam R, et al. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell. 2007;128(6):1089-103. doi: 10.1016/j.cell.2007.01.043.
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1089-1103
-
-
Brennecke, J.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
Sachidanandam, R.6
-
28
-
-
77951804331
-
MVH in piRNA processing and gene silencing of retrotransposons
-
10.1101/gad.1902110 1:CAS:528:DC%2BC3cXmtleht70%3D 2861188 20439430
-
Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Takamatsu K, Chuma S, Kojima-Kita K, et al. MVH in piRNA processing and gene silencing of retrotransposons. Genes Dev. 2010;24(9):887-92. doi: 10.1101/gad.1902110.
-
(2010)
Genes Dev
, vol.24
, Issue.9
, pp. 887-892
-
-
Kuramochi-Miyagawa, S.1
Watanabe, T.2
Gotoh, K.3
Takamatsu, K.4
Chuma, S.5
Kojima-Kita, K.6
-
29
-
-
84919459410
-
Identification of novel piRNAs in bladder cancer
-
10.1016/j.canlet.2014.10.004 1:CAS:528:DC%2BC2cXhslGjtrbK 25305452
-
Chu H, Hui G, Yuan L, Shi D, Wang Y, Du M, et al. Identification of novel piRNAs in bladder cancer. Cancer Lett. 2015;356(2 Pt B):561-7. doi: 10.1016/j.canlet.2014.10.004.
-
(2015)
Cancer Lett
, vol.356
, Issue.2
, pp. 561-567
-
-
Chu, H.1
Hui, G.2
Yuan, L.3
Shi, D.4
Wang, Y.5
Du, M.6
-
30
-
-
84889663563
-
The expression of stem cell protein Piwil2 and piR-932 in breast cancer
-
10.1016/j.suronc.2013.07.001 23992744
-
Zhang H, Ren Y, Xu H, Pang D, Duan C, Liu C. The expression of stem cell protein Piwil2 and piR-932 in breast cancer. Surg Oncol. 2013;22(4):217-23. doi: 10.1016/j.suronc.2013.07.001.
-
(2013)
Surg Oncol
, vol.22
, Issue.4
, pp. 217-223
-
-
Zhang, H.1
Ren, Y.2
Xu, H.3
Pang, D.4
Duan, C.5
Liu, C.6
-
31
-
-
80051691142
-
Detection of circulating tumor cells in peripheral blood from patients with gastric cancer using piRNAs as markers
-
10.1016/j.clinbiochem.2011.06.004 1:CAS:528:DC%2BC3MXhtVCntr%2FK 21704610
-
Cui L, Lou Y, Zhang X, Zhou H, Deng H, Song H, et al. Detection of circulating tumor cells in peripheral blood from patients with gastric cancer using piRNAs as markers. Clin Biochem. 2011;44(13):1050-7. doi: 10.1016/j.clinbiochem.2011.06.004.
-
(2011)
Clin Biochem
, vol.44
, Issue.13
, pp. 1050-1057
-
-
Cui, L.1
Lou, Y.2
Zhang, X.3
Zhou, H.4
Deng, H.5
Song, H.6
-
32
-
-
0030604698
-
Site-specific ribose methylation of preribosomal RNA: A novel function for small nucleolar RNAs
-
1:CAS:528:DyaK28XjvF2iu7g%3D 8674114
-
Kiss-Laszlo Z, Henry Y, Bachellerie JP, Caizergues-Ferrer M, Kiss T. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. Cell. 1996;85(7):1077-88.
-
(1996)
Cell
, vol.85
, Issue.7
, pp. 1077-1088
-
-
Kiss-Laszlo, Z.1
Henry, Y.2
Bachellerie, J.P.3
Caizergues-Ferrer, M.4
Kiss, T.5
-
33
-
-
0037292453
-
Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center
-
1:CAS:528:DC%2BD3sXit1Wgs7Y%3D 12620230
-
King TH, Liu B, McCully RR, Fournier MJ. Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center. Mol Cell. 2003;11(2):425-35.
-
(2003)
Mol Cell
, vol.11
, Issue.2
, pp. 425-435
-
-
King, T.H.1
Liu, B.2
McCully, R.R.3
Fournier, M.J.4
-
34
-
-
84925520015
-
Small nucleolar RNAs functioning and potential roles in cancer
-
10.1007/s13277-014-2818-8 1:CAS:528:DC%2BC2cXitVSgtrfL 25420907
-
Thorenoor N, Slaby O. Small nucleolar RNAs functioning and potential roles in cancer. Tumour Biol. 2015;36(1):41-53. doi: 10.1007/s13277-014-2818-8.
-
(2015)
Tumour Biol
, vol.36
, Issue.1
, pp. 41-53
-
-
Thorenoor, N.1
Slaby, O.2
-
35
-
-
84887610943
-
Beyond microRNA - Novel RNAs derived from small non-coding RNA and their implication in cancer
-
10.1016/j.canlet.2012.11.058 1:CAS:528:DC%2BC3sXislynu7k%3D 23376637
-
Martens-Uzunova ES, Olvedy M, Jenster G. Beyond microRNA - novel RNAs derived from small non-coding RNA and their implication in cancer. Cancer Lett. 2013;340(2):201-11. doi: 10.1016/j.canlet.2012.11.058.
-
(2013)
Cancer Lett
, vol.340
, Issue.2
, pp. 201-211
-
-
Martens-Uzunova, E.S.1
Olvedy, M.2
Jenster, G.3
-
36
-
-
84860217230
-
Small nucleolar RNAs in cancer
-
1:CAS:528:DC%2BC38Xns1Ciur8%3D 22498252
-
Mannoor K, Liao J, Jiang F. Small nucleolar RNAs in cancer. Biochim Biophys Acta. 2012;1826(1):121-8. doi: 10.1016/j.bbcan.2012.03.005.
-
(2012)
Biochim Biophys Acta
, vol.1826
, Issue.1
, pp. 121-128
-
-
Mannoor, K.1
Liao, J.2
Jiang, F.3
-
37
-
-
84927157577
-
Long noncoding RNAs: A potential novel class of cancer biomarkers
-
10.3389/fgene.2015.00145 4407501 25954300
-
Yarmishyn AA, Kurochkin IV. Long noncoding RNAs: a potential novel class of cancer biomarkers. Front Genet. 2015;6:145. doi: 10.3389/fgene.2015.00145.
-
(2015)
Front Genet
, vol.6
, pp. 145
-
-
Yarmishyn, A.A.1
Kurochkin, I.V.2
-
38
-
-
84933509543
-
Non coding RNAs in aortic aneurysmal disease
-
10.3389/fgene.2015.00125 4381652 25883602
-
Duggirala A, Delogu F, Angelini TG, Smith T, Caputo M, Rajakaruna C, et al. Non coding RNAs in aortic aneurysmal disease. Front Genet. 2015;6:125. doi: 10.3389/fgene.2015.00125.
-
(2015)
Front Genet
, vol.6
, pp. 125
-
-
Duggirala, A.1
Delogu, F.2
Angelini, T.G.3
Smith, T.4
Caputo, M.5
Rajakaruna, C.6
-
39
-
-
84924150082
-
Noncoding RNAs as potential biomarkers to predict the outcome in pancreatic cancer
-
10.2147/DDDT.S77597
-
Jin K, Luo G, Xiao Z, Liu Z, Liu C, Ji S, et al. Noncoding RNAs as potential biomarkers to predict the outcome in pancreatic cancer. Drug Des Dev Ther. 2015;9:1247-55. doi: 10.2147/DDDT.S77597.
-
(2015)
Drug des Dev Ther
, vol.9
, pp. 1247-1255
-
-
Jin, K.1
Luo, G.2
Xiao, Z.3
Liu, Z.4
Liu, C.5
Ji, S.6
-
40
-
-
84925667522
-
A novel urinary long non-coding RNA transcript improves diagnostic accuracy in patients undergoing prostate biopsy
-
10.1002/pros.22949 1:CAS:528:DC%2BC2MXkvFCku7g%3D 25597901
-
Zhang W, Ren SC, Shi XL, Liu YW, Zhu YS, Jing TL, et al. A novel urinary long non-coding RNA transcript improves diagnostic accuracy in patients undergoing prostate biopsy. Prostate. 2015;75(6):653-61. doi: 10.1002/pros.22949.
-
(2015)
Prostate
, vol.75
, Issue.6
, pp. 653-661
-
-
Zhang, W.1
Ren, S.C.2
Shi, X.L.3
Liu, Y.W.4
Zhu, Y.S.5
Jing, T.L.6
-
41
-
-
77951118936
-
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
-
10.1038/nature08975 1:CAS:528:DC%2BC3cXkslaru7w%3D 3049919 20393566
-
Gupta RA, Shah N, Wang KC, Kim J, Horlings HM, Wong DJ, et al. Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature. 2010;464(7291):1071-6. doi: 10.1038/nature08975.
-
(2010)
Nature
, vol.464
, Issue.7291
, pp. 1071-1076
-
-
Gupta, R.A.1
Shah, N.2
Wang, K.C.3
Kim, J.4
Horlings, H.M.5
Wong, D.J.6
-
42
-
-
62249133709
-
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
-
10.1038/nature07672 1:CAS:528:DC%2BD1MXht1ehsbo%3D 2754849 19182780
-
Guttman M, Amit I, Garber M, French C, Lin MF, Feldser D, et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature. 2009;458(7235):223-7. doi: 10.1038/nature07672.
-
(2009)
Nature
, vol.458
, Issue.7235
, pp. 223-227
-
-
Guttman, M.1
Amit, I.2
Garber, M.3
French, C.4
Lin, M.F.5
Feldser, D.6
-
43
-
-
34548230885
-
Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas
-
10.1016/j.ccr.2007.07.027 1:CAS:528:DC%2BD2sXhtVKqsb3L 17785203
-
Calin GA, Liu CG, Ferracin M, Hyslop T, Spizzo R, Sevignani C, et al. Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas. Cancer Cell. 2007;12(3):215-29. doi: 10.1016/j.ccr.2007.07.027.
-
(2007)
Cancer Cell
, vol.12
, Issue.3
, pp. 215-229
-
-
Calin, G.A.1
Liu, C.G.2
Ferracin, M.3
Hyslop, T.4
Spizzo, R.5
Sevignani, C.6
-
44
-
-
84856805631
-
Expression levels of transcribed ultraconserved regions uc.73 and uc.388 are altered in colorectal cancer
-
10.1159/000336479 1:CAS:528:DC%2BC38XltVOqsro%3D 22328099
-
Sana J, Hankeova S, Svoboda M, Kiss I, Vyzula R, Slaby O. Expression levels of transcribed ultraconserved regions uc.73 and uc.388 are altered in colorectal cancer. Oncology. 2012;82(2):114-8. doi: 10.1159/000336479.
-
(2012)
Oncology
, vol.82
, Issue.2
, pp. 114-118
-
-
Sana, J.1
Hankeova, S.2
Svoboda, M.3
Kiss, I.4
Vyzula, R.5
Slaby, O.6
-
45
-
-
81355123438
-
Evolution of microRNA diversity and regulation in animals
-
10.1038/nrg3079 1:CAS:528:DC%2BC3MXhsVykt7vL 22094948
-
Berezikov E. Evolution of microRNA diversity and regulation in animals. Nat Rev Genet. 2011;12(12):846-60. doi: 10.1038/nrg3079.
-
(2011)
Nat Rev Genet
, vol.12
, Issue.12
, pp. 846-860
-
-
Berezikov, E.1
-
46
-
-
79251581020
-
The art of microRNA research
-
10.1161/CIRCRESAHA.110.227496 21252150
-
van Rooij E. The art of microRNA research. Circ Res. 2011;108(2):219-34. doi: 10.1161/CIRCRESAHA.110.227496.
-
(2011)
Circ Res
, vol.108
, Issue.2
, pp. 219-234
-
-
Van Rooij, E.1
-
47
-
-
84859892863
-
MicroRNA profiling: Approaches and considerations
-
10.1038/nrg3198 1:CAS:528:DC%2BC38Xls1Wksb4%3D 22510765
-
Pritchard CC, Cheng HH, Tewari M. MicroRNA profiling: approaches and considerations. Nat Rev Genet. 2012;13(5):358-69. doi: 10.1038/nrg3198.
-
(2012)
Nat Rev Genet
, vol.13
, Issue.5
, pp. 358-369
-
-
Pritchard, C.C.1
Cheng, H.H.2
Tewari, M.3
-
48
-
-
84863425849
-
Small RNAs have a large impact: Circulating microRNAs as biomarkers for human diseases
-
10.4161/rna.20378 1:CAS:528:DC%2BC3sXpsVOhtg%3D%3D 22699556
-
Weiland M, Gao XH, Zhou L, Mi QS. Small RNAs have a large impact: circulating microRNAs as biomarkers for human diseases. RNA Biol. 2012;9(6):850-9. doi: 10.4161/rna.20378.
-
(2012)
RNA Biol
, vol.9
, Issue.6
, pp. 850-859
-
-
Weiland, M.1
Gao, X.H.2
Zhou, L.3
Mi, Q.S.4
-
49
-
-
84886100468
-
Circulating miRNAs as sensitive and specific biomarkers for the diagnosis and monitoring of human diseases: Promises and challenges
-
10.1016/j.clinbiochem.2013.03.015 23562576
-
De Guire V, Robitaille R, Tetreault N, Guerin R, Menard C, Bambace N, et al. Circulating miRNAs as sensitive and specific biomarkers for the diagnosis and monitoring of human diseases: promises and challenges. Clin Biochem. 2013;46(10-11):846-60. doi: 10.1016/j.clinbiochem.2013.03.015.
-
(2013)
Clin Biochem
, vol.46
, Issue.10-11
, pp. 846-860
-
-
De Guire, V.1
Robitaille, R.2
Tetreault, N.3
Guerin, R.4
Menard, C.5
Bambace, N.6
-
50
-
-
84877298502
-
Characterization of human plasma-derived exosomal RNAs by deep sequencing
-
10.1186/1471-2164-14-319 1:CAS:528:DC%2BC3sXptlyiu7o%3D 3653748 23663360
-
Huang X, Yuan T, Tschannen M, Sun Z, Jacob H, Du M, et al. Characterization of human plasma-derived exosomal RNAs by deep sequencing. BMC Genomics. 2013;14:319. doi: 10.1186/1471-2164-14-319.
-
(2013)
BMC Genomics
, vol.14
, pp. 319
-
-
Huang, X.1
Yuan, T.2
Tschannen, M.3
Sun, Z.4
Jacob, H.5
Du, M.6
-
51
-
-
84907220073
-
Optimization of extraction of circulating RNAs from plasma - Enabling small RNA sequencing
-
10.1371/journal.pone.0107259 4167851 25229651
-
Spornraft M, Kirchner B, Haase B, Benes V, Pfaffl MW, Riedmaier I. Optimization of extraction of circulating RNAs from plasma - enabling small RNA sequencing. PLoS One. 2014;9(9), e107259. doi: 10.1371/journal.pone.0107259.
-
(2014)
PLoS One
, vol.9
, Issue.9
-
-
Spornraft, M.1
Kirchner, B.2
Haase, B.3
Benes, V.4
Pfaffl, M.W.5
Riedmaier, I.6
-
52
-
-
84933549276
-
-
Illumina. Illumina CASAVA 1.8 http://support.illumina.com/content/dam/illumina-support/documents/myillumina/33d66b02-53b5-4f4d-9d8b-f94237c7e44d/casava-qrg-15011197b.pdf. 2011.
-
(2011)
Illumina CASAVA 1.8
-
-
-
53
-
-
84874604550
-
-
Computer program distributed by the author, website [accessed 2014-2015]
-
Gordon A. FASTX-toolkit. Computer program distributed by the author, website http://hannonlab.cshl.edu/fastx-toolkit/index.html [accessed 2014-2015]
-
FASTX-toolkit
-
-
Gordon, A.1
-
54
-
-
84965186660
-
Lighter: Fast and memory-efficient sequencing error correction without counting
-
10.1186/s13059-014-0509-9 4248469 25398208
-
Song L, Florea L, Langmead B. Lighter: fast and memory-efficient sequencing error correction without counting. Genome Biol. 2014;15(11):509. doi: 10.1186/PREACCEPT-9663167051308943.
-
(2014)
Genome Biol
, vol.15
, Issue.11
, pp. 509
-
-
Song, L.1
Florea, L.2
Langmead, B.3
-
55
-
-
0036079158
-
The human genome browser at UCSC
-
10.1101/gr.229102 1:CAS:528:DC%2BD38Xks12hs7s%3D 186604 12045153 Article published online before print in May 2002
-
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM, et al. The human genome browser at UCSC. Genome Res. 2002;12(6):996-1006. doi: 10.1101/gr.229102. Article published online before print in May 2002.
-
(2002)
Genome Res
, vol.12
, Issue.6
, pp. 996-1006
-
-
Kent, W.J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
-
56
-
-
84870420933
-
NcPRO-seq: A tool for annotation and profiling of ncRNAs in sRNA-seq data
-
10.1093/bioinformatics/bts587 1:CAS:528:DC%2BC38XhslKnsb7E 23044543
-
Chen CJ, Servant N, Toedling J, Sarazin A, Marchais A, Duvernois-Berthet E, et al. ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data. Bioinformatics. 2012;28(23):3147-9. doi: 10.1093/bioinformatics/bts587.
-
(2012)
Bioinformatics
, vol.28
, Issue.23
, pp. 3147-3149
-
-
Chen, C.J.1
Servant, N.2
Toedling, J.3
Sarazin, A.4
Marchais, A.5
Duvernois-Berthet, E.6
-
57
-
-
78651293534
-
MiRBase: Integrating microRNA annotation and deep-sequencing data
-
10.1093/nar/gkq1027 1:CAS:528:DC%2BC3sXivF2murs%3D 3013655 21037258
-
Kozomara A, Griffiths-Jones S. miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res. 2011;39(Database issue):D152-7. doi: 10.1093/nar/gkq1027.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.DATABASE ISSUE
, pp. D152-D157
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
58
-
-
84891818318
-
MiRBase: Annotating high confidence microRNAs using deep sequencing data
-
10.1093/nar/gkt1181 1:CAS:528:DC%2BC2cXos1Wk 3965103 24275495
-
Kozomara A, Griffiths-Jones S. miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res. 2014;42(Database issue):D68-73. doi: 10.1093/nar/gkt1181.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.DATABASE ISSUE
, pp. D68-D73
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
59
-
-
58149191274
-
Rfam: Updates to the RNA families database
-
10.1093/nar/gkn766 1:CAS:528:DC%2BD1cXhsFejtLrJ 2686503 18953034
-
Gardner PP, Daub J, Tate JG, Nawrocki EP, Kolbe DL, Lindgreen S, et al. Rfam: updates to the RNA families database. Nucleic Acids Res. 2009;37(Database issue):D136-40. doi: 10.1093/nar/gkn766.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.DATABASE ISSUE
, pp. D136-D140
-
-
Gardner, P.P.1
Daub, J.2
Tate, J.G.3
Nawrocki, E.P.4
Kolbe, D.L.5
Lindgreen, S.6
-
60
-
-
38549141630
-
PiRNABank: A web resource on classified and clustered Piwi-interacting RNAs
-
1:CAS:528:DC%2BD1cXhtVWitbY%3D 2238943 17881367
-
Sai Lakshmi S, Agrawal S. piRNABank: a web resource on classified and clustered Piwi-interacting RNAs. Nucleic Acids Res. 2008;36(Database issue):D173-7. doi: 10.1093/nar/gkm696.
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.DATABASE ISSUE
, pp. D173-D177
-
-
Sai Lakshmi, S.1
Agrawal, S.2
-
61
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
10.1186/s13059-014-0550-8 4302049 25516281
-
Love MI, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15(12):550. doi: 10.1186/s13059-014-0550-8.
-
(2014)
Genome Biol
, vol.15
, Issue.12
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
62
-
-
84893667824
-
Integrated analysis of microRNA and mRNA expression and association with HIF binding reveals the complexity of microRNA expression regulation under hypoxia
-
10.1186/1476-4598-13-28 3928101 24517586
-
Camps C, Saini HK, Mole DR, Choudhry H, Reczko M, Guerra-Assuncao JA, et al. Integrated analysis of microRNA and mRNA expression and association with HIF binding reveals the complexity of microRNA expression regulation under hypoxia. Mol Cancer. 2014;13:28. doi: 10.1186/1476-4598-13-28.
-
(2014)
Mol Cancer
, vol.13
, pp. 28
-
-
Camps, C.1
Saini, H.K.2
Mole, D.R.3
Choudhry, H.4
Reczko, M.5
Guerra-Assuncao, J.A.6
-
63
-
-
84872833195
-
The miRNA profile of human pancreatic islets and beta-cells and relationship to type 2 diabetes pathogenesis
-
10.1371/journal.pone.0055272 3555946 23372846
-
van de Bunt M, Gaulton KJ, Parts L, Moran I, Johnson PR, Lindgren CM, et al. The miRNA profile of human pancreatic islets and beta-cells and relationship to type 2 diabetes pathogenesis. PLoS One. 2013;8(1), e55272. doi: 10.1371/journal.pone.0055272.
-
(2013)
PLoS One
, vol.8
, Issue.1
-
-
Van De Bunt, M.1
Gaulton, K.J.2
Parts, L.3
Moran, I.4
Johnson, P.R.5
Lindgren, C.M.6
-
64
-
-
77952962186
-
Robust microRNA stability in degraded RNA preparations from human tissue and cell samples
-
10.1373/clinchem.2009.141580 1:CAS:528:DC%2BC3cXnt1Krs7o%3D 20378769
-
Jung M, Schaefer A, Steiner I, Kempkensteffen C, Stephan C, Erbersdobler A, et al. Robust microRNA stability in degraded RNA preparations from human tissue and cell samples. Clin Chem. 2010;56(6):998-1006. doi: 10.1373/clinchem.2009.141580.
-
(2010)
Clin Chem
, vol.56
, Issue.6
, pp. 998-1006
-
-
Jung, M.1
Schaefer, A.2
Steiner, I.3
Kempkensteffen, C.4
Stephan, C.5
Erbersdobler, A.6
-
65
-
-
80052213072
-
Analysis of microRNA turnover in mammalian cells following Dicer1 ablation
-
10.1093/nar/gkr148 1:CAS:528:DC%2BC3MXptlyjs70%3D 3141258 21447562
-
Gantier MP, McCoy CE, Rusinova I, Saulep D, Wang D, Xu D, et al. Analysis of microRNA turnover in mammalian cells following Dicer1 ablation. Nucleic Acids Res. 2011;39(13):5692-703. doi: 10.1093/nar/gkr148.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.13
, pp. 5692-5703
-
-
Gantier, M.P.1
McCoy, C.E.2
Rusinova, I.3
Saulep, D.4
Wang, D.5
Xu, D.6
-
66
-
-
84867593042
-
MicroRNA degradation and turnover: Regulating the regulators
-
10.1002/wrna.1114 1:CAS:528:DC%2BC38XhtlGgsbvI 3635675 22461385
-
Zhang Z, Qin YW, Brewer G, Jing Q. MicroRNA degradation and turnover: regulating the regulators. Wiley Interdiscip Rev RNA. 2012;3(4):593-600. doi: 10.1002/wrna.1114.
-
(2012)
Wiley Interdiscip Rev RNA
, vol.3
, Issue.4
, pp. 593-600
-
-
Zhang, Z.1
Qin, Y.W.2
Brewer, G.3
Jing, Q.4
-
67
-
-
77951164018
-
Differential regulation of microRNA stability
-
10.1261/rna.1851510 1:CAS:528:DC%2BC3cXlslOmu7Y%3D 2856875 20348442
-
Bail S, Swerdel M, Liu H, Jiao X, Goff LA, Hart RP, et al. Differential regulation of microRNA stability. RNA. 2010;16(5):1032-9. doi: 10.1261/rna.1851510.
-
(2010)
RNA
, vol.16
, Issue.5
, pp. 1032-1039
-
-
Bail, S.1
Swerdel, M.2
Liu, H.3
Jiao, X.4
Goff, L.A.5
Hart, R.P.6
-
68
-
-
56249145105
-
Structure of the guide-strand-containing argonaute silencing complex
-
10.1038/nature07315 1:CAS:528:DC%2BD1cXhtlKmtL%2FL 18754009
-
Wang Y, Sheng G, Juranek S, Tuschl T, Patel DJ. Structure of the guide-strand-containing argonaute silencing complex. Nature. 2008;456(7219):209-13. doi: 10.1038/nature07315.
-
(2008)
Nature
, vol.456
, Issue.7219
, pp. 209-213
-
-
Wang, Y.1
Sheng, G.2
Juranek, S.3
Tuschl, T.4
Patel, D.J.5
-
69
-
-
84931023395
-
The effects of post-mortem interval on biomolecule integrity in the brain
-
In Press
-
Nagy C MM, Lopez JP, Vaillancourt K, Cruceanu C, Gross J, Arnovitz M, Mechawar N, Turecki G. The effects of post-mortem interval on biomolecule integrity in the brain. J Neuropath Exp Neur. 2015;In Press.
-
(2015)
J Neuropath Exp Neur
-
-
Nagy, C.M.M.1
Lopez, J.P.2
Vaillancourt, K.3
Cruceanu, C.4
Gross, J.5
Arnovitz, M.6
Mechawar, N.7
Turecki, G.8
-
70
-
-
84872934514
-
MicroRNAs in myocardial infarction
-
10.1161/ATVBAHA.112.300137 1:CAS:528:DC%2BC3sXht1Kksb0%3D 23325477
-
Fiedler J, Thum T. MicroRNAs in myocardial infarction. Arterioscler Thromb Vasc Biol. 2013;33(2):201-5. doi: 10.1161/ATVBAHA.112.300137.
-
(2013)
Arterioscler Thromb Vasc Biol
, vol.33
, Issue.2
, pp. 201-205
-
-
Fiedler, J.1
Thum, T.2
-
71
-
-
78649837734
-
Plasma microRNA-122 as a biomarker for viral-, alcohol-, and chemical-related hepatic diseases
-
10.1373/clinchem.2010.147850 1:CAS:528:DC%2BC3cXhsF2js7%2FF 20930130
-
Zhang Y, Jia Y, Zheng R, Guo Y, Wang Y, Guo H, et al. Plasma microRNA-122 as a biomarker for viral-, alcohol-, and chemical-related hepatic diseases. Clin Chem. 2010;56(12):1830-8. doi: 10.1373/clinchem.2010.147850.
-
(2010)
Clin Chem
, vol.56
, Issue.12
, pp. 1830-1838
-
-
Zhang, Y.1
Jia, Y.2
Zheng, R.3
Guo, Y.4
Wang, Y.5
Guo, H.6
-
72
-
-
78149484489
-
The microRNA spectrum in 12 body fluids
-
10.1373/clinchem.2010.147405 1:CAS:528:DC%2BC3cXhsVWqurnE 20847327
-
Weber JA, Baxter DH, Zhang S, Huang DY, Huang KH, Lee MJ, et al. The microRNA spectrum in 12 body fluids. Clin Chem. 2010;56(11):1733-41. doi: 10.1373/clinchem.2010.147405.
-
(2010)
Clin Chem
, vol.56
, Issue.11
, pp. 1733-1741
-
-
Weber, J.A.1
Baxter, D.H.2
Zhang, S.3
Huang, D.Y.4
Huang, K.H.5
Lee, M.J.6
|