메뉴 건너뛰기




Volumn 17, Issue 4, 2015, Pages 860-869

Short-term hybridisation activates Tnt1 and Tto1 Copia retrotransposons in wild tuber-bearing Solanum species

Author keywords

Genomic shock; Hybridisation; Pollen viability; Retrotransposon activation; Sequence specific amplification polymorphism; Transposon methylation display; Tuber bearing Solanum spp

Indexed keywords

DICOTYLEDON; DNA; GENETIC VARIATION; GENOME; GENOTYPE; HYBRID; HYBRIDIZATION; INTERSPECIFIC INTERACTION; METHYLATION; MORPHOLOGY; POLLEN; POLYMORPHISM; POTATO; TUBER; VIABILITY; WILD POPULATION;

EID: 84931957737     PISSN: 14358603     EISSN: 14388677     Source Type: Journal    
DOI: 10.1111/plb.12301     Document Type: Article
Times cited : (15)

References (56)
  • 2
    • 1542752643 scopus 로고    scopus 로고
    • Transfer and origin of adaptations through natural hybridization: were Anderson and Stebbins right?
    • Arnold M.L. (2004) Transfer and origin of adaptations through natural hybridization: were Anderson and Stebbins right? The Plant Cell, 16, 562-570.
    • (2004) The Plant Cell , vol.16 , pp. 562-570
    • Arnold, M.L.1
  • 3
    • 66149141092 scopus 로고    scopus 로고
    • The allotetraploid Arabidopsis thaliana-Arabidopsis lyrata subsp. petraea as an alternative model system for the study of polyploidy in plants
    • Beaulieu J., Jean M., Belzile F. (2009) The allotetraploid Arabidopsis thaliana-Arabidopsis lyrata subsp. petraea as an alternative model system for the study of polyploidy in plants. Molecular Genetics & Genomics, 281, 421-435.
    • (2009) Molecular Genetics & Genomics , vol.281 , pp. 421-435
    • Beaulieu, J.1    Jean, M.2    Belzile, F.3
  • 4
    • 65349105318 scopus 로고    scopus 로고
    • Morphological and molecular evidence of natural interspecific hybridization in the diploid potato Solanum kurtzianum from Argentina
    • Bedogni M.C., Camadro E.L. (2009) Morphological and molecular evidence of natural interspecific hybridization in the diploid potato Solanum kurtzianum from Argentina. Botany-Botanique, 87, 78-87.
    • (2009) Botany-Botanique , vol.87 , pp. 78-87
    • Bedogni, M.C.1    Camadro, E.L.2
  • 5
    • 11244318254 scopus 로고    scopus 로고
    • Substitutes for genome differentiation in tuber-bearing Solanum: interspecific pollen-pistil incompatibility, nuclear-cytoplasmic male sterility, and endosperm
    • Camadro E.L., Carputo D., Peloquin S.J. (2004) Substitutes for genome differentiation in tuber-bearing Solanum: interspecific pollen-pistil incompatibility, nuclear-cytoplasmic male sterility, and endosperm. Theoretical and Applied Genetics, 109, 1369-1376.
    • (2004) Theoretical and Applied Genetics , vol.109 , pp. 1369-1376
    • Camadro, E.L.1    Carputo, D.2    Peloquin, S.J.3
  • 6
    • 84887536035 scopus 로고    scopus 로고
    • Epigenetic patterns newly established after interspecific hybridization in natural populations of Solanum
    • Cara N., Marfil C.F., Masuelli R.W. (2013) Epigenetic patterns newly established after interspecific hybridization in natural populations of Solanum. Ecology and Evolution, 3, 3764-3779.
    • (2013) Ecology and Evolution , vol.3 , pp. 3764-3779
    • Cara, N.1    Marfil, C.F.2    Masuelli, R.W.3
  • 7
    • 0029027625 scopus 로고
    • Sequence variability within the tobacco retrotransposon Tnt1 population
    • Casacuberta J.M., Vernhettes S., Grandbastien M.A. (1995) Sequence variability within the tobacco retrotransposon Tnt1 population. EMBO Journal, 14, 2670-2678.
    • (1995) EMBO Journal , vol.14 , pp. 2670-2678
    • Casacuberta, J.M.1    Vernhettes, S.2    Grandbastien, M.A.3
  • 9
    • 55049121765 scopus 로고    scopus 로고
    • Changes of cytosine methylation induced by wide hybridization and allopolyploidy in Cucumis
    • Chen L., Chen J. (2008) Changes of cytosine methylation induced by wide hybridization and allopolyploidy in Cucumis. Genome, 51, 789-799.
    • (2008) Genome , vol.51 , pp. 789-799
    • Chen, L.1    Chen, J.2
  • 10
    • 0033824517 scopus 로고    scopus 로고
    • Genetic and epigenetic interactions in allopolyploid plants
    • Comai L. (2000) Genetic and epigenetic interactions in allopolyploid plants. Plant Molecular Biology, 43, 387-399.
    • (2000) Plant Molecular Biology , vol.43 , pp. 387-399
    • Comai, L.1
  • 12
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle J.J., Doyle J.L. (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry Bulletin, 19, 11-15.
    • (1987) Phytochemistry Bulletin , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 13
    • 84883255284 scopus 로고    scopus 로고
    • Insertional mutagenesis using Tnt1 retrotransposon in potato
    • Duangpan S., Zhang W., Wu Y., Jansky S.H., Jiang J. (2013) Insertional mutagenesis using Tnt1 retrotransposon in potato. Plant Physiology, 163, 21-29.
    • (2013) Plant Physiology , vol.163 , pp. 21-29
    • Duangpan, S.1    Zhang, W.2    Wu, Y.3    Jansky, S.H.4    Jiang, J.5
  • 14
    • 0032970669 scopus 로고    scopus 로고
    • Pollen-style compatibility relations in natural populations of Solanum spegazzinii Bitt
    • Erazzú L.E., Camadro E.L., Clausen A.M. (1999) Pollen-style compatibility relations in natural populations of Solanum spegazzinii Bitt. Euphytica, 105, 219-227.
    • (1999) Euphytica , vol.105 , pp. 219-227
    • Erazzú, L.E.1    Camadro, E.L.2    Clausen, A.M.3
  • 15
    • 84868534630 scopus 로고    scopus 로고
    • Transposable elements, epigenetics, and genome evolution
    • Fedoroff N.V. (2012) Transposable elements, epigenetics, and genome evolution. Science, 338, 758-767.
    • (2012) Science , vol.338 , pp. 758-767
    • Fedoroff, N.V.1
  • 16
    • 16344366778 scopus 로고    scopus 로고
    • Allopolyploidy - a shaping force in the evolution of wheat genomes
    • Feldman M., Levy A.A. (2005) Allopolyploidy - a shaping force in the evolution of wheat genomes. Cytogenetic and Genome Research, 109, 250-258.
    • (2005) Cytogenetic and Genome Research , vol.109 , pp. 250-258
    • Feldman, M.1    Levy, A.A.2
  • 17
    • 70349288278 scopus 로고    scopus 로고
    • Genome evolution in allopolyploid wheat: a revolutionary reprogramming followed by gradual changes
    • Feldman M., Levy A.A. (2009) Genome evolution in allopolyploid wheat: a revolutionary reprogramming followed by gradual changes. Journal of Genetics and Genomics, 2009, 511-518.
    • (2009) Journal of Genetics and Genomics , vol.2009 , pp. 511-518
    • Feldman, M.1    Levy, A.A.2
  • 18
    • 0036250001 scopus 로고    scopus 로고
    • Plant transposable elements: where genetics meets genomics
    • Feschotte C., Jiang N., Wessler S.R. (2002) Plant transposable elements: where genetics meets genomics. Nature Reviews Genetics, 3, 329-341.
    • (2002) Nature Reviews Genetics , vol.3 , pp. 329-341
    • Feschotte, C.1    Jiang, N.2    Wessler, S.R.3
  • 19
    • 0032080772 scopus 로고    scopus 로고
    • Activation of plant retrotransposons under stress conditions
    • Grandbastien M.A. (1998) Activation of plant retrotransposons under stress conditions. Trends in Plant Science, 3, 181-187.
    • (1998) Trends in Plant Science , vol.3 , pp. 181-187
    • Grandbastien, M.A.1
  • 20
    • 0024978849 scopus 로고
    • Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics
    • Grandbastien M.-A., Spielmann A., Caboche C. (1989) Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics. Nature, 337, 376-380.
    • (1989) Nature , vol.337 , pp. 376-380
    • Grandbastien, M.-A.1    Spielmann, A.2    Caboche, C.3
  • 23
    • 0027168422 scopus 로고
    • Activation of tobacco retrotansposons during tissue culture
    • Hirochika H. (1993) Activation of tobacco retrotansposons during tissue culture. EMBO Journal, 12, 2521-2528.
    • (1993) EMBO Journal , vol.12 , pp. 2521-2528
    • Hirochika, H.1
  • 24
    • 0034103860 scopus 로고    scopus 로고
    • Silencing of retrotransposons in Arabidopsis and reactivation by the ddm1 mutation
    • Hirochika H., Okamoto H., Kakutani T. (2000) Silencing of retrotransposons in Arabidopsis and reactivation by the ddm1 mutation. The Plant Cell, 12, 357-368.
    • (2000) The Plant Cell , vol.12 , pp. 357-368
    • Hirochika, H.1    Okamoto, H.2    Kakutani, T.3
  • 25
    • 79751524445 scopus 로고    scopus 로고
    • What's in a name; Genetic structure in Solanum section Petota studied using population-genetic tools
    • Jacobs M.M.J., Smulders M.J.M., van den Berg R.G., Vosman B. (2011) What's in a name; Genetic structure in Solanum section Petota studied using population-genetic tools. BMC Evolutionary Biology, 11, 42.
    • (2011) BMC Evolutionary Biology , vol.11 , pp. 42
    • Jacobs, M.M.J.1    Smulders, M.J.M.2    van den Berg, R.G.3    Vosman, B.4
  • 26
    • 37249012285 scopus 로고    scopus 로고
    • Large-scale survey of cytosine methylation of retrotransposons and the impact of readout transcription from long terminal repeats on expression of adjacent rice genes
    • Kashkush K., Khasdan V. (2007) Large-scale survey of cytosine methylation of retrotransposons and the impact of readout transcription from long terminal repeats on expression of adjacent rice genes. Genetics, 177, 1975-1985.
    • (2007) Genetics , vol.177 , pp. 1975-1985
    • Kashkush, K.1    Khasdan, V.2
  • 27
    • 0037226595 scopus 로고    scopus 로고
    • Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat
    • Kashkush K., Feldman M., Levy A.A. (2003a) Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nature Genetics, 33, 102-106.
    • (2003) Nature Genetics , vol.33 , pp. 102-106
    • Kashkush, K.1    Feldman, M.2    Levy, A.A.3
  • 28
    • 0036241339 scopus 로고    scopus 로고
    • Gene loss, silencing and activation in a newly synthesized wheat allotetraploid
    • Kashkush K., Feldman M., Levy A.A. (2003b) Gene loss, silencing and activation in a newly synthesized wheat allotetraploid. Genetics, 160, 1322-1328.
    • (2003) Genetics , vol.160 , pp. 1322-1328
    • Kashkush, K.1    Feldman, M.2    Levy, A.A.3
  • 29
    • 78951489213 scopus 로고    scopus 로고
    • Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat
    • Kraitshtein Z., Yaakov B., Khasdan V., Kashkush K. (2010) Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat. Genetics, 186, 801-812.
    • (2010) Genetics , vol.186 , pp. 801-812
    • Kraitshtein, Z.1    Yaakov, B.2    Khasdan, V.3    Kashkush, K.4
  • 30
    • 83055194732 scopus 로고    scopus 로고
    • Meiotic abnormalities underlying pollen sterility in wild potato hybrids and spontaneous populations
    • Larrosa F.H., Maune J.F., Erazzú L.E., Camadro E.L. (2012) Meiotic abnormalities underlying pollen sterility in wild potato hybrids and spontaneous populations. Plant Biology, 14, 223-233.
    • (2012) Plant Biology , vol.14 , pp. 223-233
    • Larrosa, F.H.1    Maune, J.F.2    Erazzú, L.E.3    Camadro, E.L.4
  • 31
    • 79952054652 scopus 로고    scopus 로고
    • Instability of chromosome number and DNA methylation variation induced by hybridization and amphiploid formation between Raphanus sativus L. and Brassica alboglabra Bailey
    • Li X., Guo W., Wang B., Li X., Chen H., Wei L., Wang Y., Wu J., Long H. (2010) Instability of chromosome number and DNA methylation variation induced by hybridization and amphiploid formation between Raphanus sativus L. and Brassica alboglabra Bailey. BMC Plant Biology, 10, 207.
    • (2010) BMC Plant Biology , vol.10 , pp. 207
    • Li, X.1    Guo, W.2    Wang, B.3    Li, X.4    Chen, H.5    Wei, L.6    Wang, Y.7    Wu, J.8    Long, H.9
  • 32
    • 0029001089 scopus 로고
    • RNA-mediated transposition of the tobacco retrotransposon Tntl in Arabidopsis thaliana
    • Lucas H., Feuerbach F., Kunert K., Grandbastien M.A., Caboche M. (1995) RNA-mediated transposition of the tobacco retrotransposon Tntl in Arabidopsis thaliana. EMBO Journal, 14, 2364-2373.
    • (1995) EMBO Journal , vol.14 , pp. 2364-2373
    • Lucas, H.1    Feuerbach, F.2    Kunert, K.3    Grandbastien, M.A.4    Caboche, M.5
  • 33
    • 33947219934 scopus 로고    scopus 로고
    • Hybrid speciation
    • Mallet J. (2007) Hybrid speciation. Nature, 446, 279-283.
    • (2007) Nature , vol.446 , pp. 279-283
    • Mallet, J.1
  • 35
    • 61349138153 scopus 로고    scopus 로고
    • The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species
    • Manetti M.-E., Rossi M., Nakabashi M., Grandbastien M.-A., Van Sluys M.-A. (2009) The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species. Mol Genet Genomics, 281, 261-271.
    • (2009) Mol Genet Genomics , vol.281 , pp. 261-271
    • Manetti, M.-E.1    Rossi, M.2    Nakabashi, M.3    Grandbastien, M.-A.4    Van Sluys, M.-A.5
  • 36
    • 84897611361 scopus 로고    scopus 로고
    • Reproductive ecology and genetic variability in natural populations of the wild potato, Solanum kurtzianum
    • Marfil C.F., Masuelli R.W. (2013) Reproductive ecology and genetic variability in natural populations of the wild potato, Solanum kurtzianum. Plant Biology, 16, 489-494.
    • (2013) Plant Biology , vol.16 , pp. 489-494
    • Marfil, C.F.1    Masuelli, R.W.2
  • 37
    • 62349088361 scopus 로고    scopus 로고
    • Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii
    • Marfil C.F., Camadro E.L., Masuelli R.W. (2009) Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii. BMC Plant Biology, 9, 21.
    • (2009) BMC Plant Biology , vol.9 , pp. 21
    • Marfil, C.F.1    Camadro, E.L.2    Masuelli, R.W.3
  • 39
    • 0021715393 scopus 로고
    • The significance of responses of the genome to challenge
    • McClintock B. (1984) The significance of responses of the genome to challenge. Science, 226, 792-801.
    • (1984) Science , vol.226 , pp. 792-801
    • McClintock, B.1
  • 40
    • 0034755086 scopus 로고    scopus 로고
    • The mobility of the tobacco Tnt1 retrotrasnposon correlates with its transcriptional activation by fungal factors
    • Melayah D., Bonnivard E., Chalhoub B., Audéon C., Grandbastien M.A. (2001) The mobility of the tobacco Tnt1 retrotrasnposon correlates with its transcriptional activation by fungal factors. The Plant Journal, 28, 159-168.
    • (2001) The Plant Journal , vol.28 , pp. 159-168
    • Melayah, D.1    Bonnivard, E.2    Chalhoub, B.3    Audéon, C.4    Grandbastien, M.A.5
  • 42
    • 51549119808 scopus 로고    scopus 로고
    • Invasion of the Arabidopsis genome by the tobacco retrotransposon Tnt1 is controlled by reversible transcriptional gene silencing
    • Pérez-Hormaeche J., Potet F., Beacuclair L., Le Masson I., Courtial B., Bouché N., Lucas H. (2008) Invasion of the Arabidopsis genome by the tobacco retrotransposon Tnt1 is controlled by reversible transcriptional gene silencing. Plant Physiology, 147, 1264-1278.
    • (2008) Plant Physiology , vol.147 , pp. 1264-1278
    • Pérez-Hormaeche, J.1    Potet, F.2    Beacuclair, L.3    Le Masson, I.4    Courtial, B.5    Bouché, N.6    Lucas, H.7
  • 45
    • 34548139429 scopus 로고    scopus 로고
    • Plant speciation
    • Rieseberg L.H., Wills J.H. (2007) Plant speciation. Science, 317, 910-913.
    • (2007) Science , vol.317 , pp. 910-913
    • Rieseberg, L.H.1    Wills, J.H.2
  • 46
    • 34548599765 scopus 로고    scopus 로고
    • The promoter of the TLC1.1 retrotransposon from Solanum chilense is activated by multiple stress-related signaling molecules
    • Salazar M., González E., Casaretto J.A., Casacuberta J.M., Ruiz-Lara S. (2007) The promoter of the TLC1.1 retrotransposon from Solanum chilense is activated by multiple stress-related signaling molecules. Plant Cell Reports, 26, 1861-1868.
    • (2007) Plant Cell Reports , vol.26 , pp. 1861-1868
    • Salazar, M.1    González, E.2    Casaretto, J.A.3    Casacuberta, J.M.4    Ruiz-Lara, S.5
  • 47
    • 34548862848 scopus 로고    scopus 로고
    • Sequence specific amplification polymorphisms (SSAP): a multi-locus approach for analysing transposon insertions
    • Syed N.H., Flavell A.J. (2007) Sequence specific amplification polymorphisms (SSAP): a multi-locus approach for analysing transposon insertions. Nature Protocols, 1, 2746-2752.
    • (2007) Nature Protocols , vol.1 , pp. 2746-2752
    • Syed, N.H.1    Flavell, A.J.2
  • 48
    • 38849143084 scopus 로고    scopus 로고
    • Rice transposable elements are characterized by various methylation environments in the genome
    • Takata M., Kiyohara A., Takasu A., Kishima Y., Ohtsubo H., Sano Y. (2007) Rice transposable elements are characterized by various methylation environments in the genome. BMC Genomics, 8, 469.
    • (2007) BMC Genomics , vol.8 , pp. 469
    • Takata, M.1    Kiyohara, A.2    Takasu, A.3    Kishima, Y.4    Ohtsubo, H.5    Sano, Y.6
  • 49
    • 0032006618 scopus 로고    scopus 로고
    • Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate
    • Takeda S., Sugimoto K., Otsuki H., Hirochika H. (1998) Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate. Plant Molecular Biology, 36, 365-376.
    • (1998) Plant Molecular Biology , vol.36 , pp. 365-376
    • Takeda, S.1    Sugimoto, K.2    Otsuki, H.3    Hirochika, H.4
  • 50
    • 34247499348 scopus 로고    scopus 로고
    • The distribution of copia-type retrotransposons and the evolutionary history of tomato and related wild species
    • Tam S.M., Causse M., Garchery C., Burck H., Mhiri C., Grandbastien M.A. (2007) The distribution of copia-type retrotransposons and the evolutionary history of tomato and related wild species. Journal of Evolutionary Biology, 20, 1056-1072.
    • (2007) Journal of Evolutionary Biology , vol.20 , pp. 1056-1072
    • Tam, S.M.1    Causse, M.2    Garchery, C.3    Burck, H.4    Mhiri, C.5    Grandbastien, M.A.6
  • 52
    • 0031282540 scopus 로고    scopus 로고
    • In vivo characterization of transcriptional regulatory sequences involved in the defense-associated expression of the tobacco retrotransposon Tnt1
    • Vernhettes S., Grandbastien M.A., Casacuberta J.M. (1997) In vivo characterization of transcriptional regulatory sequences involved in the defense-associated expression of the tobacco retrotransposon Tnt1. Plant Molecular Biology, 35, 673-679.
    • (1997) Plant Molecular Biology , vol.35 , pp. 673-679
    • Vernhettes, S.1    Grandbastien, M.A.2    Casacuberta, J.M.3
  • 54
    • 67650106508 scopus 로고    scopus 로고
    • Molecular characterization of a rice mutator-phenotype derived from an incompatible cross-pollination reveals transgenerational mobilization of multiple transposable elements and extensive epigenetic instability
    • Wang H., Chai Y., Chu X., Zhao Y., Wu Y., Zhao J., Wu Y., Zhao J., Ngezahayo F., Xu C., Liu B. (2009) Molecular characterization of a rice mutator-phenotype derived from an incompatible cross-pollination reveals transgenerational mobilization of multiple transposable elements and extensive epigenetic instability. BMC Plant Biology, 9, 63.
    • (2009) BMC Plant Biology , vol.9 , pp. 63
    • Wang, H.1    Chai, Y.2    Chu, X.3    Zhao, Y.4    Wu, Y.5    Zhao, J.6    Wu, Y.7    Zhao, J.8    Ngezahayo, F.9    Xu, C.10    Liu, B.11
  • 55
    • 78651388093 scopus 로고    scopus 로고
    • Massive alterations of the methylation patterns around DNA transposons in the first four generations of a newly formed wheat allohexaploid
    • Yaakov B., Kashkush K. (2011) Massive alterations of the methylation patterns around DNA transposons in the first four generations of a newly formed wheat allohexaploid. Genome, 54, 42-49.
    • (2011) Genome , vol.54 , pp. 42-49
    • Yaakov, B.1    Kashkush, K.2
  • 56
    • 79960125436 scopus 로고    scopus 로고
    • Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat
    • Zhao N., Zhu B., Li M., Wang L., Xu L., Zhang H., Zheng S., Qi B., Han F., Lui B. (2011) Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat. Genetics, 188, 499-509.
    • (2011) Genetics , vol.188 , pp. 499-509
    • Zhao, N.1    Zhu, B.2    Li, M.3    Wang, L.4    Xu, L.5    Zhang, H.6    Zheng, S.7    Qi, B.8    Han, F.9    Lui, B.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.