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Volumn 3, Issue 1, 2014, Pages

Computational methods for optical mapping

Author keywords

Genome assembly; Genome mapping; Optical mapping; Structural variation

Indexed keywords

ALGORITHM; ARTICLE; GENE CLUSTER; GENE MAPPING; GENE SEQUENCE; GENE TECHNOLOGY; GENETIC VARIABILITY; GENOME ANALYSIS; MATHEMATICAL COMPUTING; OPTICAM MAPPING; PRIORITY JOURNAL;

EID: 84931059501     PISSN: None     EISSN: 2047217X     Source Type: Journal    
DOI: 10.1186/2047-217X-3-33     Document Type: Article
Times cited : (32)

References (20)
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    • Meyers, B.C.1    Scalabrin, S.2    Morgante, M.3
  • 2
    • 0027485082 scopus 로고
    • Ordered restriction maps of Saccharomyces cerevisiae chromosomes constructed by optical mapping
    • 8211116
    • Schwartz DC, Li X, Hernandez LI, Ramnarain SP, Huff EJ, Wang YK. Ordered restriction maps of Saccharomyces cerevisiae chromosomes constructed by optical mapping. Science 1993, 262:110-114. 10.1126/science.8211116, 8211116.
    • (1993) Science , vol.262 , pp. 110-114
    • Schwartz, D.C.1    Li, X.2    Hernandez, L.I.3    Ramnarain, S.P.4    Huff, E.J.5    Wang, Y.K.6
  • 8
    • 33750453045 scopus 로고    scopus 로고
    • An algorithm for assembly of ordered restriction maps from single DNA molecules
    • 1635078, 17043225
    • Valouev A, Schwartz DC, Zhou S, Waterman MS. An algorithm for assembly of ordered restriction maps from single DNA molecules. Proc Natl Acad Sci U S A 2006, 103:15770-15775. 10.1073/pnas.0604040103, 1635078, 17043225.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 15770-15775
    • Valouev, A.1    Schwartz, D.C.2    Zhou, S.3    Waterman, M.S.4
  • 9
    • 43349084767 scopus 로고    scopus 로고
    • Scaffolding and validation of bacterial genome assemblies using optical restriction maps
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    • Nagarajan N, Read TD, Pop M. Scaffolding and validation of bacterial genome assemblies using optical restriction maps. Bioinformatics 2008, 24:1229-1235. 10.1093/bioinformatics/btn102, 2373919, 18356192.
    • (2008) Bioinformatics , vol.24 , pp. 1229-1235
    • Nagarajan, N.1    Read, T.D.2    Pop, M.3
  • 10
    • 84958538672 scopus 로고    scopus 로고
    • Efficient Indexed Alignment of Contigs to Optical Maps
    • Berlin Heidelberg: Springer, Brown D, Morgenstern B, Lecture Notes in Computer Science
    • Muggli M, Puglisi S, Boucher C. Efficient Indexed Alignment of Contigs to Optical Maps. Algorithms in Bioinformatics 2014, 8701:68-81. Berlin Heidelberg: Springer, Brown D, Morgenstern B, Lecture Notes in Computer Science.
    • (2014) Algorithms in Bioinformatics , vol.8701 , pp. 68-81
    • Muggli, M.1    Puglisi, S.2    Boucher, C.3
  • 11
    • 84860752901 scopus 로고    scopus 로고
    • Statistical significance of optical map alignments
    • 3342520, 22506568
    • Sarkar D, Goldstein S, Schwartz DC, Newton MA. Statistical significance of optical map alignments. J Comput Biol 2012, 19:478-492. 10.1089/cmb.2011.0221, 3342520, 22506568.
    • (2012) J Comput Biol , vol.19 , pp. 478-492
    • Sarkar, D.1    Goldstein, S.2    Schwartz, D.C.3    Newton, M.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.