Employing whole genome mapping for optimal de novo assembly of bacterial genomes

BMC Research Notes

Volumn 7, Issue 1, 2014, Pages

  Xavier, Basil Britto ^a   Sabirova, Julia ^a   Pieter, Moons ^a   Hernalsteens, Jean Pierre ^b   De Greve, Henri ^b   Goossens, Herman ^a   Malhotra Kumar, Surbhi ^a  

^a UNIVERSITY OF ANTWERP   (Belgium)

^b VRIJE UNIVERSITEIT BRUSSEL   (Belgium)

Author keywords

de bruijn graph; De novo assembly; k mer; Microbial genomes; SPAdes and Velvet; Whole genome mapping

Indexed keywords

BACTERIA (MICROORGANISMS);

BACTERIAL GENOME; CHROMOSOME MAP; COMPUTER PROGRAM; CONTIG MAPPING; DNA SEQUENCE; GENETICS; PROCEDURES; STAPHYLOCOCCUS AUREUS;

CHROMOSOME MAPPING; CONTIG MAPPING; GENOME, BACTERIAL; SEQUENCE ANALYSIS, DNA; SOFTWARE; STAPHYLOCOCCUS AUREUS;

EID: 84904845644     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-7-484     Document Type: Article

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