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Volumn 8, Issue 1, 2015, Pages

The idiosyncrasy of spatial structure in bacterial competition

Author keywords

Bacterial competition; Cooperation; Spatial structure

Indexed keywords

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 84931022517     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/s13104-015-1169-x     Document Type: Article
Times cited : (21)

References (37)
  • 2
    • 0028248821 scopus 로고
    • The importance of being discrete (and spatial)
    • Durrett R, Levin S (1994) The importance of being discrete (and spatial). Theor Popul Biol 46(3):363-394
    • (1994) Theor Popul Biol , vol.46 , Issue.3 , pp. 363-394
    • Durrett, R.1    Levin, S.2
  • 3
    • 4344605134 scopus 로고    scopus 로고
    • Cooperation and competition in pathogenic bacteria
    • 1:CAS:528:DC%2BD2cXmvFCis7c%3D 15329720
    • Griffin A, West S, Buckling A (2004) Cooperation and competition in pathogenic bacteria. Nature 430(7003):1024-1027
    • (2004) Nature , vol.430 , Issue.7003 , pp. 1024-1027
    • Griffin, A.1    West, S.2    Buckling, A.3
  • 4
    • 79960639069 scopus 로고    scopus 로고
    • Evolution of restraint in a structured rock-paper-scissors community
    • 1:CAS:528:DC%2BC3MXovVKku7k%3D 3131814 21690371
    • Nahum JR, Harding BN, Kerr B (2011) Evolution of restraint in a structured rock-paper-scissors community. Proc Natl Acad Sci USA 108(Suppl 2):10831-8
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 10831-10838
    • Nahum, J.R.1    Harding, B.N.2    Kerr, B.3
  • 5
    • 84876893934 scopus 로고    scopus 로고
    • Range expansion promotes cooperation in an experimental microbial metapopulation
    • 3645579 23569263
    • Datta MS, Korolev KS, Cvijovic I, Dudley C, Gore J (2013) Range expansion promotes cooperation in an experimental microbial metapopulation. Proc Natl Acad Sci 110(18):7354-7359
    • (2013) Proc Natl Acad Sci , vol.110 , Issue.18 , pp. 7354-7359
    • Datta, M.S.1    Korolev, K.S.2    Cvijovic, I.3    Dudley, C.4    Gore, J.5
  • 6
    • 38049138580 scopus 로고    scopus 로고
    • Genetic drift at expanding frontiers promotes gene segregation
    • 1:CAS:528:DC%2BD1cXitFSquw%3D%3D 2148399 18056799
    • Hallatschek O, Hersen P, Ramanathan S, Nelson DR (2007) Genetic drift at expanding frontiers promotes gene segregation. Proc Natl Acad Sci 104(50):19926-19930
    • (2007) Proc Natl Acad Sci , vol.104 , Issue.50 , pp. 19926-19930
    • Hallatschek, O.1    Hersen, P.2    Ramanathan, S.3    Nelson, D.R.4
  • 7
    • 84878020408 scopus 로고    scopus 로고
    • Spatial population expansion promotes the evolution of cooperation in an experimental prisoner's dilemma
    • 4405629 23664975
    • Van Dyken JD, Müller MJ, Mack KM, Desai MM (2013) Spatial population expansion promotes the evolution of cooperation in an experimental prisoner's dilemma. Curr Biol 23:919-923
    • (2013) Curr Biol , vol.23 , pp. 919-923
    • Van Dyken, J.D.1    Müller, M.J.2    Mack, K.M.3    Desai, M.M.4
  • 8
    • 84892918402 scopus 로고    scopus 로고
    • Genetic drift opposes mutualism during spatial population expansion
    • 3903240 24395776
    • Müller MJ, Neugeboren BI, Nelson DR, Murray AW (2014) Genetic drift opposes mutualism during spatial population expansion. Proc Natl Acad Sci 111:1037-1042
    • (2014) Proc Natl Acad Sci , vol.111 , pp. 1037-1042
    • Müller, M.J.1    Neugeboren, B.I.2    Nelson, D.R.3    Murray, A.W.4
  • 9
    • 80053273724 scopus 로고    scopus 로고
    • A quantitative test of population genetics using spatiogenetic patterns in bacterial colonies
    • 3385003 21956031
    • Korolev KS, Xavier JB, Nelson DR, Foster KR (2011) A quantitative test of population genetics using spatiogenetic patterns in bacterial colonies. Am Nat 178(4):538
    • (2011) Am Nat , vol.178 , Issue.4 , pp. 538
    • Korolev, K.S.1    Xavier, J.B.2    Nelson, D.R.3    Foster, K.R.4
  • 10
    • 84890928592 scopus 로고    scopus 로고
    • Cell polarity-driven instability generates self-organized, fractal patterning of cell layers
    • 1:CAS:528:DC%2BC3sXnvVGjtb4%3D 23688051
    • Rudge TJ, Federici F, Steiner PJ, Kan A, Haseloff J (2013) Cell polarity-driven instability generates self-organized, fractal patterning of cell layers. ACS Synth Biol 2:705-714
    • (2013) ACS Synth Biol , vol.2 , pp. 705-714
    • Rudge, T.J.1    Federici, F.2    Steiner, P.J.3    Kan, A.4    Haseloff, J.5
  • 11
    • 33751232956 scopus 로고    scopus 로고
    • Bacterial metapopulations in nanofabricated landscapes
    • 1:CAS:528:DC%2BD28Xht1KqsLfI 1635019 17090676
    • Keymer J, Galajda P, Muldoon C, Park S, Austin R (2006) Bacterial metapopulations in nanofabricated landscapes. Proc Natl Acad Sci USA 103(46):17290-17295
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.46 , pp. 17290-17295
    • Keymer, J.1    Galajda, P.2    Muldoon, C.3    Park, S.4    Austin, R.5
  • 12
    • 84886003327 scopus 로고    scopus 로고
    • Spatial structure facilitates cooperation in a social dilemma: Empirical evidence from a bacterial community
    • Hol FJ, Galajda P, Nagy K, Woolthuis RG, Dekker C, Keymer JE (2013) Spatial structure facilitates cooperation in a social dilemma: Empirical evidence from a bacterial community. PloS One 8(10):77042
    • (2013) PloS One , vol.8 , Issue.10 , pp. 77042
    • Hol, F.J.1    Galajda, P.2    Nagy, K.3    Woolthuis, R.G.4    Dekker, C.5    Keymer, J.E.6
  • 13
  • 14
    • 84891804324 scopus 로고    scopus 로고
    • Solutions to the public goods dilemma in bacterial biofilms
    • 1:CAS:528:DC%2BC3sXhvFOgtrvO 3935403 24332540
    • Drescher K, Nadell CD, Stone HA, Wingreen NS, Bassler BL (2014) Solutions to the public goods dilemma in bacterial biofilms. Curr Biol 24(1):50-5
    • (2014) Curr Biol , vol.24 , Issue.1 , pp. 50-55
    • Drescher, K.1    Nadell, C.D.2    Stone, H.A.3    Wingreen, N.S.4    Bassler, B.L.5
  • 15
    • 84901585888 scopus 로고    scopus 로고
    • The effects of chemical interactions and culture history on the colonization of structured habitats by competing bacterial populations
    • 4032360 24884963
    • van Vliet S, Hol FJH, Weenink T, Galajda P, Keymer JE (2014) The effects of chemical interactions and culture history on the colonization of structured habitats by competing bacterial populations. BMC Microbiol 14:116
    • (2014) BMC Microbiol , vol.14 , pp. 116
    • Van Vliet, S.1    Hol, F.J.H.2    Weenink, T.3    Galajda, P.4    Keymer, J.E.5
  • 16
    • 84907007618 scopus 로고    scopus 로고
    • Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community
    • 4161892 25159553
    • Hol FJ, Voges MJ, Dekker C, Keymer JE (2014) Nutrient-responsive regulation determines biodiversity in a colicin-mediated bacterial community. BMC Biol 12(1):68
    • (2014) BMC Biol , vol.12 , Issue.1 , pp. 68
    • Hol, F.J.1    Voges, M.J.2    Dekker, C.3    Keymer, J.E.4
  • 17
    • 84901429041 scopus 로고    scopus 로고
    • Chemical warfare and survival strategies in bacterial range expansions
    • 4032534 24806706
    • Weber MF, Poxleitner G, Hebisch E, Frey E, Opitz M (2014) Chemical warfare and survival strategies in bacterial range expansions. J R Soc Interface 11(96):20140172
    • (2014) J R Soc Interface , vol.11 , Issue.96 , pp. 20140172
    • Weber, M.F.1    Poxleitner, G.2    Hebisch, E.3    Frey, E.4    Opitz, M.5
  • 18
    • 84908254231 scopus 로고    scopus 로고
    • Zooming in to see the bigger picture: Microfluidic and nanofabrication tools to study bacteria
    • 25342809
    • Hol FJH, Dekker C (2014) Zooming in to see the bigger picture: microfluidic and nanofabrication tools to study bacteria. Science 346(6208):1251821
    • (2014) Science , vol.346 , Issue.6208 , pp. 1251821
    • Hol, F.J.H.1    Dekker, C.2
  • 19
    • 0026613691 scopus 로고
    • Evolutionary games and spatial chaos
    • Nowak M, May R (1992) Evolutionary games and spatial chaos. Nature 359(6398):826-829
    • (1992) Nature , vol.359 , Issue.6398 , pp. 826-829
    • Nowak, M.1    May, R.2
  • 20
    • 38649125925 scopus 로고    scopus 로고
    • Self-structuring in spatial evolutionary ecology
    • 18070102
    • Lion S, Baalen M (2008) Self-structuring in spatial evolutionary ecology. Ecol Lett 11(3):277-295
    • (2008) Ecol Lett , vol.11 , Issue.3 , pp. 277-295
    • Lion, S.1    Baalen, M.2
  • 21
    • 4444233112 scopus 로고    scopus 로고
    • Biofilms promote altruism
    • 1:CAS:528:DC%2BD2cXntValu7g%3D 15289571
    • Kreft J-U (2004) Biofilms promote altruism. Microbiology 150(8):2751-2760
    • (2004) Microbiology , vol.150 , Issue.8 , pp. 2751-2760
    • Kreft, J.-U.1
  • 22
    • 33644751686 scopus 로고    scopus 로고
    • Evolutionary dynamics of social dilemmas in structured heterogeneous populations
    • 1:CAS:528:DC%2BD28XksF2rsr8%3D 1413882 16484371
    • Santos F, Pacheco J, Lenaerts T (2006) Evolutionary dynamics of social dilemmas in structured heterogeneous populations. Proc Natl Acad Sci USA 103(9):3490-3494
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.9 , pp. 3490-3494
    • Santos, F.1    Pacheco, J.2    Lenaerts, T.3
  • 23
    • 20744435030 scopus 로고    scopus 로고
    • Models of cooperation based on the prisoner's dilemma and the snowdrift game
    • Doebeli M, Hauert C (2005) Models of cooperation based on the prisoner's dilemma and the snowdrift game. Ecol Lett 8(7):748-766
    • (2005) Ecol Lett , vol.8 , Issue.7 , pp. 748-766
    • Doebeli, M.1    Hauert, C.2
  • 24
    • 77950831062 scopus 로고    scopus 로고
    • Emergence of spatial structure in cell groups and the evolution of cooperation
    • Nadell C, Foster K, Xavier J (2010) Emergence of spatial structure in cell groups and the evolution of cooperation. PLoS Comput Biol 6(3):1000716
    • (2010) PLoS Comput Biol , vol.6 , Issue.3 , pp. 1000716
    • Nadell, C.1    Foster, K.2    Xavier, J.3
  • 25
    • 1942421127 scopus 로고    scopus 로고
    • Spatial structure often inhibits the evolution of cooperation in the snowdrift game
    • 1:CAS:528:DC%2BD2cXivVKqsr8%3D 15074318
    • Hauert C, Doebeli M (2004) Spatial structure often inhibits the evolution of cooperation in the snowdrift game. Nature 428(6983):643-646
    • (2004) Nature , vol.428 , Issue.6983 , pp. 643-646
    • Hauert, C.1    Doebeli, M.2
  • 26
    • 84859703182 scopus 로고    scopus 로고
    • Spatial structure and interspecific cooperation: Theory and an empirical test using the mycorrhizal mutualism
    • Verbruggen E, El Mouden C, Jansa J, Akkermans G, Bücking H, West SA, Kiers ET (2012) Spatial structure and interspecific cooperation: theory and an empirical test using the mycorrhizal mutualism. Am Nat 179(5):133-146
    • (2012) Am Nat , vol.179 , Issue.5 , pp. 133-146
    • Verbruggen, E.1    El Mouden, C.2    Jansa, J.3    Akkermans, G.4    Bücking, H.5    West, S.A.6
  • 27
    • 84890523197 scopus 로고    scopus 로고
    • Spatial dilemmas of diffusible public goods
    • Allen B, Gore J, Nowak MA (2013) Spatial dilemmas of diffusible public goods. eLife 2
    • (2013) ELife 2
    • Allen, B.1    Gore, J.2    Ma, N.3
  • 28
    • 0027510647 scopus 로고
    • Microbial competition: Escherichia coli mutants that take over stationary phase cultures
    • 1:STN:280:DyaK3s3gs1Whsg%3D%3D 7681219
    • Zambrano M, Siegele D, Almiron M, Tormo A, Kolter R (1993) Microbial competition: Escherichia coli mutants that take over stationary phase cultures. Science 259(5102):1757-1760
    • (1993) Science , vol.259 , Issue.5102 , pp. 1757-1760
    • Zambrano, M.1    Siegele, D.2    Almiron, M.3    Tormo, A.4    Kolter, R.5
  • 29
    • 0034972742 scopus 로고    scopus 로고
    • Evolutionary cheating in Escherichia coli stationary phase cultures
    • 1:STN:280:DC%2BD3Mzjs1elsg%3D%3D 1461681 11404318
    • Vulic M, Kolter R (2001) Evolutionary cheating in Escherichia coli stationary phase cultures. Genetics 158(2):519-26
    • (2001) Genetics , vol.158 , Issue.2 , pp. 519-526
    • Vulic, M.1    Kolter, R.2
  • 30
    • 0033616769 scopus 로고    scopus 로고
    • Evolution of microbial diversity during prolonged starvation
    • 1:CAS:528:DyaK1MXjslChtrs%3D 22413 10097156
    • Finkel SE, Kolter R (1999) Evolution of microbial diversity during prolonged starvation. Proc Natl Acad Sci 96(7):4023-4027
    • (1999) Proc Natl Acad Sci , vol.96 , Issue.7 , pp. 4023-4027
    • Finkel, S.E.1    Kolter, R.2
  • 31
    • 31544474634 scopus 로고    scopus 로고
    • Long-term survival during stationary phase: Evolution and the gasp phenotype
    • 1:CAS:528:DC%2BD28XksVyhsw%3D%3D 16415927
    • Finkel S (2006) Long-term survival during stationary phase: evolution and the gasp phenotype. Nat Rev Microbiol 4(2):113-120
    • (2006) Nat Rev Microbiol , vol.4 , Issue.2 , pp. 113-120
    • Finkel, S.1
  • 32
    • 58149481224 scopus 로고    scopus 로고
    • Computation of mutual fitness by competing bacteria
    • 1:CAS:528:DC%2BD1MXhsFWmsA%3D%3D 2600899 19074280
    • Keymer JE, Galajda P, Lambert G, Liao D, Austin RH (2008) Computation of mutual fitness by competing bacteria. Proc Natl Acad Sci USA 105(51):20269-73
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.51 , pp. 20269-20273
    • Keymer, J.E.1    Galajda, P.2    Lambert, G.3    Liao, D.4    Austin, R.H.5
  • 33
    • 79955381414 scopus 로고    scopus 로고
    • Anomalous spatial redistribution of competing bacteria under starvation conditions
    • 1:CAS:528:DC%2BC3MXotVyqsbg%3D 3133049 21317322
    • Lambert G, Liao D, Vyawahare S, Austin RH (2011) Anomalous spatial redistribution of competing bacteria under starvation conditions. J Bacteriol 193(8):1878-83
    • (2011) J Bacteriol , vol.193 , Issue.8 , pp. 1878-1883
    • Lambert, G.1    Liao, D.2    Vyawahare, S.3    Austin, R.H.4
  • 34
    • 84877729488 scopus 로고    scopus 로고
    • Evolution in microbes
    • 1:CAS:528:DC%2BC3sXhtFGrs7fE
    • Kussell E (2013) Evolution in microbes. Ann Rev Biophys 42:493-514
    • (2013) Ann Rev Biophys , vol.42 , pp. 493-514
    • Kussell, E.1
  • 35
    • 13244259382 scopus 로고    scopus 로고
    • Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12
    • 1:CAS:528:DC%2BD2MXmsVOqug%3D%3D 15558318
    • Patten C, Kirchhof M, Schertzberg M, Morton R, Schellhorn H (2004) Microarray analysis of RpoS-mediated gene expression in Escherichia coli K-12. Mol Genet Genomics 272(5):580-591
    • (2004) Mol Genet Genomics , vol.272 , Issue.5 , pp. 580-591
    • Patten, C.1    Kirchhof, M.2    Schertzberg, M.3    Morton, R.4    Schellhorn, H.5
  • 36
    • 39249084651 scopus 로고    scopus 로고
    • Rpos regulation of gene expression during exponential growth of Escherichia coli k12
    • 1:CAS:528:DC%2BD1cXhvFyrsb4%3D 18158608
    • Dong T, Kirchhof M, Schellhorn H (2008) Rpos regulation of gene expression during exponential growth of Escherichia coli k12. Mol Genet Genomics 279(3):267-277
    • (2008) Mol Genet Genomics , vol.279 , Issue.3 , pp. 267-277
    • Dong, T.1    Kirchhof, M.2    Schellhorn, H.3


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