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Volumn 24, Issue 11, 2014, Pages 3172-3180

Mutations in DCPS and EDC3 in autosomal recessive intellectual disability indicate a crucial role for mRNA decapping in neurodevelopment

(23)  Ahmed, Iltaf a,b   Buchert, Rebecca c   Zhou, Mi d   Jiao, Xinfu d   Mittal, Kirti a   Sheikh, Taimoor I a   Scheller, Ute c   Vasli, Nasim a   Rafiq, Muhammad Arshad a   Qasim Brohi, M e   Mikhailov, Anna a   Ayaz, Muhammad f   Bhatti, Attya b   Sticht, Heinrich c   Nasr, Tanveer g,h   Carter, Melissa T i   Uebe, Steffen c   Reis, André c   Ayub, Muhammad f,j   John, Peter b   more..


Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; DCPS ENZYME; DECAPPING ENZYME 2; EDC3 PROTEIN; EXONUCLEASE; GLYCINE; MESSENGER RNA; METHIONINE; NUCLEOTIDE; PHENYLALANINE; SCAVENGER; SERINE; THREONINE; UNCLASSIFIED DRUG; DCPS PROTEIN, HUMAN; EDC3 PROTEIN, HUMAN; ISOPROTEIN; RIBONUCLEASE; RNA SPLICING; SMALL NUCLEAR RIBONUCLEOPROTEIN;

EID: 84930716318     PISSN: 09646906     EISSN: 14602083     Source Type: Journal    
DOI: 10.1093/hmg/ddv069     Document Type: Article
Times cited : (37)

References (43)
  • 1
    • 84919575664 scopus 로고    scopus 로고
    • Control of mRNA turnover:implication of cytoplasmic RNA granules
    • Adjibade, P. and Mazroui, R. (2014) Control of mRNA turnover:implication of cytoplasmic RNA granules. Semin. Cell Dev. Biol., 34, 15-23.
    • (2014) Semin. Cell Dev. Biol. , vol.34 , pp. 15-23
    • Adjibade, P.1    Mazroui, R.2
  • 3
    • 84860320152 scopus 로고    scopus 로고
    • The regulation of mRNA stability in mammalian cells: 2.0
    • Wu, X. and Brewer, G. (2012) The regulation of mRNA stability in mammalian cells: 2.0. Gene, 500, 10-21.
    • (2012) Gene , vol.500 , pp. 10-21
    • Wu, X.1    Brewer, G.2
  • 4
    • 32544441936 scopus 로고    scopus 로고
    • Decapping the message: a beginning or an end
    • Liu, H. and Kiledjian, M. (2006) Decapping the message: a beginning or an end. Biochem. Soc. Trans., 34, 35-38.
    • (2006) Biochem. Soc. Trans. , vol.34 , pp. 35-38
    • Liu, H.1    Kiledjian, M.2
  • 5
    • 84900481033 scopus 로고    scopus 로고
    • Decapping Scavenger (DcpS) enzyme: advances in its structure, activity and roles in the cap-dependent mRNA metabolism
    • Milac, A.L., Bojarska, E. and Wypijewska del Nogal, A. (2014) Decapping Scavenger (DcpS) enzyme: advances in its structure, activity and roles in the cap-dependent mRNA metabolism. Biochim. Biophys. Acta, 1839, 452-462.
    • (2014) Biochim. Biophys. Acta , vol.1839 , pp. 452-462
    • Milac, A.L.1    Bojarska, E.2    Wypijewska del Nogal, A.3
  • 6
    • 78149426485 scopus 로고    scopus 로고
    • Multiple mRNA decapping enzymes in mammalian cells
    • Song, M.G., Li, Y. and Kiledjian, M. (2010) Multiple mRNA decapping enzymes in mammalian cells. Mol. Cell, 40, 423-432.
    • (2010) Mol. Cell , vol.40 , pp. 423-432
    • Song, M.G.1    Li, Y.2    Kiledjian, M.3
  • 7
    • 84877792802 scopus 로고    scopus 로고
    • Structural and functional control of the eukaryotic mRNA decapping machinery
    • Arribas-Layton, M., Wu, D., Lykke-Andersen, J. and Song, H. (2013) Structural and functional control of the eukaryotic mRNA decapping machinery. Biochim. Biophys. Acta, 1829, 580-589.
    • (2013) Biochim. Biophys. Acta , vol.1829 , pp. 580-589
    • Arribas-Layton, M.1    Wu, D.2    Lykke-Andersen, J.3    Song, H.4
  • 9
    • 25144482816 scopus 로고    scopus 로고
    • General translational repression by activators of mRNA decapping
    • Coller, J. and Parker, R. (2005) General translational repression by activators of mRNA decapping. Cell, 122, 875-886.
    • (2005) Cell , vol.122 , pp. 875-886
    • Coller, J.1    Parker, R.2
  • 10
    • 29144481702 scopus 로고    scopus 로고
    • Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping
    • Fenger-Gron, M., Fillman, C., Norrild, B. and Lykke-Andersen, J. (2005) Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping. Mol. Cell, 20, 905-915.
    • (2005) Mol. Cell , vol.20 , pp. 905-915
    • Fenger-Gron, M.1    Fillman, C.2    Norrild, B.3    Lykke-Andersen, J.4
  • 11
    • 0000541228 scopus 로고
    • In Forfar, J.O. and Arneil, G.C. (eds), Churchill-Livingstone, Edinburgh, UK
    • Tanner, J.M. (1978) In Forfar, J.O. and Arneil, G.C. (eds), Textbook of Pediatrics. Churchill-Livingstone, Edinburgh, UK, pp. 253-303.
    • (1978) Textbook of Pediatrics , pp. 253-303
    • Tanner, J.M.1
  • 12
  • 13
    • 2342453338 scopus 로고    scopus 로고
    • An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays
    • Zhao, X., Li, C., Paez, J.G., Chin, K., Janne, P.A., Chen, T.H., Girard, L., Minna, J., Christiani, D., Leo, C. et al. (2004) An integrated view of copy number and allelic alterations in the cancer genome using single nucleotide polymorphism arrays. Cancer Res., 64, 3060-3071.
    • (2004) Cancer Res. , vol.64 , pp. 3060-3071
    • Zhao, X.1    Li, C.2    Paez, J.G.3    Chin, K.4    Janne, P.A.5    Chen, T.H.6    Girard, L.7    Minna, J.8    Christiani, D.9    Leo, C.10
  • 14
    • 2542548405 scopus 로고    scopus 로고
    • dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data
    • Lin, M.,Wei, L.J., Sellers,W.R., Lieberfarb, M.,Wong,W.H. and Li, C. (2004) dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data. Bioinformatics, 20, 1233-1240.
    • (2004) Bioinformatics , vol.20 , pp. 1233-1240
    • Lin, M.1    Wei, L.J.2    Sellers, W.R.3    Lieberfarb, M.4    Wong, W.H.5    Li, C.6
  • 15
    • 67849083083 scopus 로고    scopus 로고
    • HomozygosityMapper-an interactive approach to homozygosity mapping
    • Seelow, D., Schuelke, M., Hildebrandt, F. and Nurnberg, P. (2009) HomozygosityMapper-an interactive approach to homozygosity mapping. Nucleic Acids Res., 37, W593-W599.
    • (2009) Nucleic Acids Res. , vol.37 , pp. W593-W599
    • Seelow, D.1    Schuelke, M.2    Hildebrandt, F.3    Nurnberg, P.4
  • 16
    • 84904410171 scopus 로고    scopus 로고
    • Truncation of the E3 ubiquitin ligase component FBXO31 causes non-syndromic autosomal recessive intellectual disability in a Pakistani family
    • Mir, A., Sritharan, K., Mittal, K., Vasli, N., Araujo, C., Jamil, T., Rafiq, M.A., Anwar, Z., Mikhailov, A., Rauf, S. et al. (2014) Truncation of the E3 ubiquitin ligase component FBXO31 causes non-syndromic autosomal recessive intellectual disability in a Pakistani family. Hum. Genet., 133, 975-984.
    • (2014) Hum. Genet. , vol.133 , pp. 975-984
    • Mir, A.1    Sritharan, K.2    Mittal, K.3    Vasli, N.4    Araujo, C.5    Jamil, T.6    Rafiq, M.A.7    Anwar, Z.8    Mikhailov, A.9    Rauf, S.10
  • 17
    • 84897456458 scopus 로고    scopus 로고
    • MutationTaster2: mutation prediction for the deep-sequencing age
    • Schwarz, J.M., Cooper, D.N., Schuelke, M. and Seelow, D. (2014) MutationTaster2: mutation prediction for the deep-sequencing age. Nat. Methods, 11, 361-362.
    • (2014) Nat. Methods , vol.11 , pp. 361-362
    • Schwarz, J.M.1    Cooper, D.N.2    Schuelke, M.3    Seelow, D.4
  • 18
    • 0043122919 scopus 로고    scopus 로고
    • SIFT: predicting amino acid changes that affect protein function
    • Ng, P.C. and Henikoff, S. (2003) SIFT: predicting amino acid changes that affect protein function. Nucleic Acids Res., 31, 3812-3814.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3812-3814
    • Ng, P.C.1    Henikoff, S.2
  • 22
    • 0034567210 scopus 로고    scopus 로고
    • Comparative protein structure modeling. Introduction and practical examples with modeller
    • Sanchez, R. and Sali, A. (2000) Comparative protein structure modeling. Introduction and practical examples with modeller. Methods Mol. Biol., 143, 97-129.
    • (2000) Methods Mol. Biol. , vol.143 , pp. 97-129
    • Sanchez, R.1    Sali, A.2
  • 23
    • 1842816418 scopus 로고    scopus 로고
    • Insights into the structure,mechanism, and regulationof scavenger mRNA decapping activity
    • Gu,M., Fabrega,C., Liu, S.W., Liu, H., Kiledjian,M. and Lima,C.D. (2004) Insights into the structure,mechanism, and regulationof scavenger mRNA decapping activity. Mol. Cell, 14, 67-80.
    • (2004) Mol. Cell , vol.14 , pp. 67-80
    • Gu, M.1    Fabrega, C.2    Liu, S.W.3    Liu, H.4    Kiledjian, M.5    Lima, C.D.6
  • 25
    • 44149087394 scopus 로고    scopus 로고
    • DcpS scavenger decapping enzyme can modulate premRNA splicing
    • Shen, V., Liu, H., Liu, S.W., Jiao, X. and Kiledjian, M. (2008) DcpS scavenger decapping enzyme can modulate premRNA splicing. RNA, 14, 1132-1142.
    • (2008) RNA , vol.14 , pp. 1132-1142
    • Shen, V.1    Liu, H.2    Liu, S.W.3    Jiao, X.4    Kiledjian, M.5
  • 26
    • 57349121979 scopus 로고    scopus 로고
    • DcpS, a general modulator of cap-binding protein-dependent processes?
    • Bail, S. and Kiledjian, M. (2008) DcpS, a general modulator of cap-binding protein-dependent processes?. RNA Biol., 5, 216-219.
    • (2008) RNA Biol. , vol.5 , pp. 216-219
    • Bail, S.1    Kiledjian, M.2
  • 28
    • 27644438330 scopus 로고    scopus 로고
    • Scavenger decapping activity facilitates 5′ to 3′ mRNA decay
    • Liu, H. and Kiledjian, M. (2005) Scavenger decapping activity facilitates 5′ to 3′ mRNA decay. Mol. Cell. Biol., 25, 9764-9772.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 9764-9772
    • Liu, H.1    Kiledjian, M.2
  • 29
    • 84861419478 scopus 로고    scopus 로고
    • Activation of 5′-3′ exoribonuclease Xrn1 by cofactor Dcs1 is essential for mitochondrial function in yeast
    • Sinturel, F., Brechemier-Baey, D., Kiledjian, M., Condon, C. and Benard, L. (2012) Activation of 5′-3′ exoribonuclease Xrn1 by cofactor Dcs1 is essential for mitochondrial function in yeast. Proc. Natl Acad. Sci. USA, 109, 8264-8269.
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 8264-8269
    • Sinturel, F.1    Brechemier-Baey, D.2    Kiledjian, M.3    Condon, C.4    Benard, L.5
  • 31
    • 35948951960 scopus 로고    scopus 로고
    • Edc3p and a glutamine/ asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae
    • Decker, C.J., Teixeira, D. and Parker, R. (2007) Edc3p and a glutamine/ asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae. J. Cell Biol., 179, 437-449.
    • (2007) J. Cell Biol. , vol.179 , pp. 437-449
    • Decker, C.J.1    Teixeira, D.2    Parker, R.3
  • 33
    • 70349869257 scopus 로고    scopus 로고
    • Modulation of neuritogenesis by a protein implicated in X-linked mental retardation
    • Jiao, X., Chen, H., Chen, J., Herrup, K., Firestein, B.L. and Kiledjian, M. (2009) Modulation of neuritogenesis by a protein implicated in X-linked mental retardation. J. Neurosci., 29, 12419-12427.
    • (2009) J. Neurosci. , vol.29 , pp. 12419-12427
    • Jiao, X.1    Chen, H.2    Chen, J.3    Herrup, K.4    Firestein, B.L.5    Kiledjian, M.6
  • 38
    • 14844359631 scopus 로고    scopus 로고
    • Crystal structures of human DcpS in ligand-free and m7GDP-bound forms suggest a dynamic mechanism for scavenger mRNA decapping
    • Chen, N., Walsh, M.A., Liu, Y., Parker, R. and Song, H. (2005) Crystal structures of human DcpS in ligand-free and m7GDP-bound forms suggest a dynamic mechanism for scavenger mRNA decapping. J. Mol. Biol., 347, 707-718.
    • (2005) J. Mol. Biol. , vol.347 , pp. 707-718
    • Chen, N.1    Walsh, M.A.2    Liu, Y.3    Parker, R.4    Song, H.5
  • 39
    • 0031473847 scopus 로고    scopus 로고
    • SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
    • Guex, N. and Peitsch, M.C. (1997) SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis, 18, 2714-2723.
    • (1997) Electrophoresis , vol.18 , pp. 2714-2723
    • Guex, N.1    Peitsch, M.C.2
  • 40
    • 0346882663 scopus 로고    scopus 로고
    • ModLoop: automated modeling of loops in protein structures
    • Fiser, A. and Sali, A. (2003) ModLoop: automated modeling of loops in protein structures. Bioinformatics, 19, 2500-2501.
    • (2003) Bioinformatics , vol.19 , pp. 2500-2501
    • Fiser, A.1    Sali, A.2
  • 42
    • 84861332327 scopus 로고    scopus 로고
    • MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins
    • Kozlowski, L.P. and Bujnicki, J.M. (2012) MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins. BMC Bioinformatics, 13, 111.
    • (2012) BMC Bioinformatics , vol.13 , pp. 111
    • Kozlowski, L.P.1    Bujnicki, J.M.2
  • 43
    • 0037009517 scopus 로고    scopus 로고
    • The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases
    • Liu, H., Rodgers, N.D., Jiao, X. and Kiledjian, M. (2002) The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases. EMBO J., 21, 4699-4708.
    • (2002) EMBO J. , vol.21 , pp. 4699-4708
    • Liu, H.1    Rodgers, N.D.2    Jiao, X.3    Kiledjian, M.4


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