메뉴 건너뛰기




Volumn 10, Issue 5, 2015, Pages

Quantification of histone deacetylase isoforms in human frontal cortex, human retina, and mouse brain

Author keywords

[No Author keywords available]

Indexed keywords

AMYLOID BETA PROTEIN; BRAIN ENZYME; HISTONE DEACETYLASE; HISTONE DEACETYLASE 1; HISTONE DEACETYLASE 2; HISTONE DEACETYLASE 3; HISTONE DEACETYLASE 4; HISTONE DEACETYLASE 5; HISTONE DEACETYLASE 6; HISTONE DEACETYLASE 7; ISOENZYME;

EID: 84930640747     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0126592     Document Type: Article
Times cited : (54)

References (40)
  • 1
    • 84858225391 scopus 로고    scopus 로고
    • 2012 Alzheimer's disease facts and figures
    • PMID: 22404854
    • The Alzheimer's Association. 2012 Alzheimer's disease facts and figures. Alzheimers Dement J Alzheimers Assoc. 2012; 8: 131-168. doi: 10.1016/j.jalz.2012.02.001 PMID: 22404854
    • (2012) Alzheimers Dement J Alzheimers Assoc , vol.8 , pp. 131-168
    • The Alzheimer's Association1
  • 2
    • 79954993409 scopus 로고    scopus 로고
    • Chatting histone modifications in mammals
    • PMID: 21266346
    • Izzo A, Schneider R. Chatting histone modifications in mammals. Brief Funct Genomics. 2010; 9: 429-443. doi: 10.1093/bfgp/elq024 PMID: 21266346
    • (2010) Brief Funct Genomics , vol.9 , pp. 429-443
    • Izzo, A.1    Schneider, R.2
  • 3
    • 70349798896 scopus 로고    scopus 로고
    • The epigenetic bottleneck of neurodegenerative and psychiatric diseases
    • PMID: 19747081
    • Sananbenesi F, Fischer A. The epigenetic bottleneck of neurodegenerative and psychiatric diseases. Biol Chem. 2009; 390: 1145-1153. doi: 10.1515/BC.2009.131 PMID: 19747081
    • (2009) Biol Chem , vol.390 , pp. 1145-1153
    • Sananbenesi, F.1    Fischer, A.2
  • 4
    • 84902892701 scopus 로고    scopus 로고
    • Epigenetic regulation of adult neural stem cells: Implications for Alzheimer's disease
    • PMID: 24964731
    • Fitzsimons CP, van Bodegraven E, Schouten M, Lardenoije R, Kompotis K, Kenis G, et al. Epigenetic regulation of adult neural stem cells: implications for Alzheimer's disease. Mol Neurodegener. 2014; 9: 25. doi: 10.1186/1750-1326-9-25 PMID: 24964731
    • (2014) Mol Neurodegener , vol.9 , pp. 25
    • Fitzsimons, C.P.1    Van Bodegraven, E.2    Schouten, M.3    Lardenoije, R.4    Kompotis, K.5    Kenis, G.6
  • 5
    • 84911447251 scopus 로고    scopus 로고
    • The epigenetic dimension of Alzheimer's disease: Causal, consequence, or curiosity?
    • PMID: 25364287
    • Millan MJ. The epigenetic dimension of Alzheimer's disease: causal, consequence, or curiosity? Dialogues Clin Neurosci. 2014; 16: 373-393. PMID: 25364287
    • (2014) Dialogues Clin Neurosci , vol.16 , pp. 373-393
    • Millan, M.J.1
  • 6
    • 84891783174 scopus 로고    scopus 로고
    • Activities at the Universal Protein Resource (UniProt)
    • PMID: 24253303
    • UniProt Consortium. Activities at the Universal Protein Resource (UniProt). Nucleic Acids Res. 2014; 42: D191-198. doi: 10.1093/nar/gkt1140 PMID: 24253303
    • (2014) Nucleic Acids Res , vol.42 , pp. D191-D198
  • 8
    • 79958001269 scopus 로고    scopus 로고
    • The role of histone acetylation in age-associated memory impairment and Alzheimer's disease
    • PMID: 21540120
    • Stilling RM, Fischer A. The role of histone acetylation in age-associated memory impairment and Alzheimer's disease. Neurobiol Learn Mem. 2011; 96: 19-26. doi: 10.1016/j.nlm.2011.04.002 PMID: 21540120
    • (2011) Neurobiol Learn Mem , vol.96 , pp. 19-26
    • Stilling, R.M.1    Fischer, A.2
  • 9
    • 84872982286 scopus 로고    scopus 로고
    • HDAC6 as a target for neurodegenerative diseases: What makes it different from the other HDACs?
    • PMID: 23356410
    • Simões-Pires C, Zwick V, Nurisso A, Schenker E, Carrupt P-A, Cuendet M. HDAC6 as a target for neurodegenerative diseases: what makes it different from the other HDACs? Mol Neurodegener. 2013; 8: 7. doi: 10.1186/1750-1326-8-7 PMID: 23356410
    • (2013) Mol Neurodegener , vol.8 , pp. 7
    • Simões-Pires, C.1    Zwick, V.2    Nurisso, A.3    Schenker, E.4    Carrupt, P.-A.5    Cuendet, M.6
  • 10
    • 84890204436 scopus 로고    scopus 로고
    • On the origin of Alzheimer's disease. Trials and tribulations of the amyloid hypothesis
    • PMID: 24252390
    • Castello MA, Soriano S. On the origin of Alzheimer's disease. Trials and tribulations of the amyloid hypothesis. Ageing Res Rev. 2014; 13: 10-12. doi: 10.1016/j.arr.2013.10.001 PMID: 24252390
    • (2014) Ageing Res Rev , vol.13 , pp. 10-12
    • Castello, M.A.1    Soriano, S.2
  • 11
    • 4644261125 scopus 로고    scopus 로고
    • Regulation of histone acetylation during memory formation in the hippocampus
    • PMID: 15273246
    • Levenson JM, O'Riordan KJ, Brown KD, Trinh MA, Molfese DL, Sweatt JD. Regulation of histone acetylation during memory formation in the hippocampus. J Biol Chem. 2004; 279: 40545-40559. doi: 10.1074/jbc.M402229200 PMID: 15273246
    • (2004) J Biol Chem , vol.279 , pp. 40545-40559
    • Levenson, J.M.1    O'Riordan, K.J.2    Brown, K.D.3    Trinh, M.A.4    Molfese, D.L.5    Sweatt, J.D.6
  • 12
    • 34248523169 scopus 로고    scopus 로고
    • Recovery of learning and memory is associated with chromatin remodelling
    • PMID: 17468743
    • Fischer A, Sananbenesi F, Wang X, Dobbin M, Tsai L-H. Recovery of learning and memory is associated with chromatin remodelling. Nature. 2007; 447: 178-182. doi: 10.1038/nature05772 PMID: 17468743
    • (2007) Nature , vol.447 , pp. 178-182
    • Fischer, A.1    Sananbenesi, F.2    Wang, X.3    Dobbin, M.4    Tsai, L.-H.5
  • 13
    • 84872465435 scopus 로고    scopus 로고
    • Loss of HDAC5 impairs memory function: Implications for Alzheimer's disease
    • PMID: 22914591
    • Agis-Balboa RC, Pavelka Z, Kerimoglu C, Fischer A. Loss of HDAC5 impairs memory function: implications for Alzheimer's disease. J Alzheimers Dis. 2013; 33: 35-44. doi: 10.3233/JAD-2012-121009 PMID: 22914591
    • (2013) J Alzheimers Dis , vol.33 , pp. 35-44
    • Agis-Balboa, R.C.1    Pavelka, Z.2    Kerimoglu, C.3    Fischer, A.4
  • 14
    • 84869046060 scopus 로고    scopus 로고
    • HDAC4 governs a transcriptional program essential for synaptic plasticity and memory
    • PMID: 23141539
    • Sando R, Gounko N, Pieraut S, Liao L, Yates J III, Maximov A. HDAC4 governs a transcriptional program essential for synaptic plasticity and memory. Cell. 2012; 151: 821-834. doi: 10.1016/j.cell.2012.09.037 PMID: 23141539
    • (2012) Cell , vol.151 , pp. 821-834
    • Sando, R.1    Gounko, N.2    Pieraut, S.3    Liao, L.4    Yates, J.5    Maximov, A.6
  • 15
    • 81555207184 scopus 로고    scopus 로고
    • Targeting HDACs: A promising therapy for Alzheimer's disease
    • PMID: 21941604
    • Xu K, Dai X-L, Huang H-C, Jiang Z-F. Targeting HDACs: a promising therapy for Alzheimer's disease. Oxid Med Cell Longev. 2011; 2011: 143269. doi: 10.1155/2011/143269 PMID: 21941604
    • (2011) Oxid Med Cell Longev , vol.2011 , pp. 143269
    • Xu, K.1    Dai, X.-L.2    Huang, H.-C.3    Jiang, Z.-F.4
  • 16
    • 77954286123 scopus 로고    scopus 로고
    • Increased activity and expression of histone deacetylase 1 in relation to tumor necrosis factor-alpha in synovial tissue of rheumatoid arthritis
    • PMID: 20609223
    • Kawabata T, Nishida K, Takasugi K, Ogawa H, Sada K, Kadota Y, et al. Increased activity and expression of histone deacetylase 1 in relation to tumor necrosis factor-alpha in synovial tissue of rheumatoid arthritis. Arthritis Res Ther. 2010; 12: R133. doi: 10.1186/ar3071 PMID: 20609223
    • (2010) Arthritis Res Ther , vol.12 , pp. R133
    • Kawabata, T.1    Nishida, K.2    Takasugi, K.3    Ogawa, H.4    Sada, K.5    Kadota, Y.6
  • 17
    • 52249090461 scopus 로고    scopus 로고
    • Differential expression of 12 histone deacetylase (HDAC) genes in astrocytomas and normal brain tissue: Class II and IV are hypoexpressed in glioblastomas
    • PMID: 18713462
    • Lucio-Eterovic AKB, Cortez MAA, Valera ET, Motta FJN, Queiroz RGP, Machado HR, et al. Differential expression of 12 histone deacetylase (HDAC) genes in astrocytomas and normal brain tissue: class II and IV are hypoexpressed in glioblastomas. BMC Cancer. 2008; 8: 243. doi: 10.1186/1471-2407-8-243 PMID: 18713462
    • (2008) BMC Cancer , vol.8 , pp. 243
    • Lucio-Eterovic, A.K.B.1    Cortez, M.A.A.2    Valera, E.T.3    Motta, F.J.N.4    Queiroz, R.G.P.5    Machado, H.R.6
  • 19
    • 84867593726 scopus 로고    scopus 로고
    • Imaging epigenetic regulation by histone deacetylases in the brain using PET/MRI with 18F-FAHA
    • PMID: 22995777
    • Yeh H-H, Tian M, Hinz R, Young D, Shavrin A, Mukhapadhyay U, et al. Imaging epigenetic regulation by histone deacetylases in the brain using PET/MRI with 18F-FAHA. NeuroImage. 2013; 64: 630-639. doi: 10.1016/j.neuroimage.2012.09.019 PMID: 22995777
    • (2013) NeuroImage , vol.64 , pp. 630-639
    • Yeh, H.-H.1    Tian, M.2    Hinz, R.3    Young, D.4    Shavrin, A.5    Mukhapadhyay, U.6
  • 20
    • 84865579674 scopus 로고    scopus 로고
    • QconCATs: Design and expression of concatenated protein standards for multiplexed protein quantification
    • PMID: 22772144
    • Simpson DM, Beynon RJ. QconCATs: design and expression of concatenated protein standards for multiplexed protein quantification. Anal Bioanal Chem. 2012; 404: 977-989. doi: 10.1007/s00216-012-6230-1 PMID: 22772144
    • (2012) Anal Bioanal Chem , vol.404 , pp. 977-989
    • Simpson, D.M.1    Beynon, R.J.2
  • 21
    • 84899831465 scopus 로고    scopus 로고
    • Trends in QconCATs for targeted proteomics
    • Chen J, Turko IV. Trends in QconCATs for targeted proteomics. Trends Anal Chem. 2014; 57: 1-5. doi: 10.1016/j.trac.2013.12.013
    • (2014) Trends Anal Chem , vol.57 , pp. 1-5
    • Chen, J.1    Turko, I.V.2
  • 22
    • 84871821062 scopus 로고    scopus 로고
    • Quantification of amyloid precursor protein isoforms using quantification concatamer internal standard
    • PMID: 23186391
    • Chen J, Wang M, Turko IV. Quantification of amyloid precursor protein isoforms using quantification concatamer internal standard. Anal Chem. 2013; 85: 303-307. doi: 10.1021/ac3033239 PMID: 23186391
    • (2013) Anal Chem , vol.85 , pp. 303-307
    • Chen, J.1    Wang, M.2    Turko, I.V.3
  • 23
    • 84867094990 scopus 로고    scopus 로고
    • 15N-labeled full-length apolipoprotein E4 as an internal standard for mass spectrometry quantification of apolipoprotein E isoforms
    • PMID: 22931427
    • Wang M, Chen J, Turko IV. 15N-labeled full-length apolipoprotein E4 as an internal standard for mass spectrometry quantification of apolipoprotein E isoforms. Anal Chem. 2012; 84: 8340-8344. doi: 10.1021/ac3018873 PMID: 22931427
    • (2012) Anal Chem , vol.84 , pp. 8340-8344
    • Wang, M.1    Chen, J.2    Turko, I.V.3
  • 24
    • 84865049163 scopus 로고    scopus 로고
    • Mass spectrometry quantification of clusterin in the human brain
    • PMID: 22906254
    • Chen J, Wang M, Turko IV. Mass spectrometry quantification of clusterin in the human brain. Mol Neurodegener. 2012; 7: 41. doi: 10.1186/1750-1326-7-41 PMID: 22906254
    • (2012) Mol Neurodegener , vol.7 , pp. 41
    • Chen, J.1    Wang, M.2    Turko, I.V.3
  • 25
    • 84884489647 scopus 로고    scopus 로고
    • Mass spectrometry quantification of PICALM and AP180 in human frontal cortex and neural retina
    • PMID: 23954523
    • Chen J, Pikuleva IA, Turko IV. Mass spectrometry quantification of PICALM and AP180 in human frontal cortex and neural retina. Anal Biochem. 2013; 442: 253-258. doi: 10.1016/j.ab.2013.08.005 PMID: 23954523
    • (2013) Anal Biochem , vol.442 , pp. 253-258
    • Chen, J.1    Pikuleva, I.A.2    Turko, I.V.3
  • 26
    • 84879227379 scopus 로고    scopus 로고
    • Mass spectrometry assessment of ubiquitin carboxyl-terminal hydrolase L1 partitioning between soluble and particulate brain homogenate fractions
    • PMID: 23682718
    • Chen J, Huang RY-C, Turko IV. Mass spectrometry assessment of ubiquitin carboxyl-terminal hydrolase L1 partitioning between soluble and particulate brain homogenate fractions. Anal Chem. 2013; 85: 6011-6017. doi: 10.1021/ac400831z PMID: 23682718
    • (2013) Anal Chem , vol.85 , pp. 6011-6017
    • Chen, J.1    Huang, R.Y.-C.2    Turko, I.V.3
  • 27
    • 84861313738 scopus 로고    scopus 로고
    • Spatial distribution of the pathways of cholesterol homeostasis in human retina
    • PMID: 22629470
    • Zheng W, Reem RE, Omarova S, Huang S, DiPatre PL, Charvet CD, et al. Spatial distribution of the pathways of cholesterol homeostasis in human retina. PloS One. 2012; 7: e37926. doi: 10.1371/journal.pone.0037926 PMID: 22629470
    • (2012) PloS One , vol.7 , pp. e37926
    • Zheng, W.1    Reem, R.E.2    Omarova, S.3    Huang, S.4    DiPatre, P.L.5    Charvet, C.D.6
  • 28
    • 33749521100 scopus 로고    scopus 로고
    • Intraneuronal beta-amyloid aggregates, neurodegeneration, and neuron loss in transgenic mice with five familial Alzheimer's disease mutations: Potential factors in amyloid plaque formation
    • Oakley H, Cole SL, Logan S, Maus E, Shao P, Craft J, et al. Intraneuronal beta-amyloid aggregates, neurodegeneration, and neuron loss in transgenic mice with five familial Alzheimer's disease mutations: potential factors in amyloid plaque formation. J Neurosci Off J Soc Neurosci. 2006; 26: 10129-10140. doi: 10.1523/JNEUROSCI.1202-06.2006
    • (2006) J Neurosci Off J Soc Neurosci , vol.26 , pp. 10129-10140
    • Oakley, H.1    Cole, S.L.2    Logan, S.3    Maus, E.4    Shao, P.5    Craft, J.6
  • 29
    • 78650355102 scopus 로고    scopus 로고
    • Effect of collision energy optimization on the measurement of peptides by selected reaction monitoring (SRM) mass spectrometry
    • PMID: 21090646
    • MacLean B, Tomazela DM, Abbatiello SE, Zhang S, Whiteaker JR, Paulovich AG, et al. Effect of collision energy optimization on the measurement of peptides by selected reaction monitoring (SRM) mass spectrometry. Anal Chem. 2010; 82: 10116-10124. doi: 10.1021/ac102179j PMID: 21090646
    • (2010) Anal Chem , vol.82 , pp. 10116-10124
    • MacLean, B.1    Tomazela, D.M.2    Abbatiello, S.E.3    Zhang, S.4    Whiteaker, J.R.5    Paulovich, A.G.6
  • 30
    • 0013805953 scopus 로고
    • Lipid composition of the normal human brain: Gray matter, white matter, and myelin
    • PMID: 5865382
    • O'Brien JS, Sampson EL. Lipid composition of the normal human brain: gray matter, white matter, and myelin. J Lipid Res. 1965; 6: 537-544. PMID: 5865382
    • (1965) J Lipid Res , vol.6 , pp. 537-544
    • O'Brien, J.S.1    Sampson, E.L.2
  • 31
    • 84863508369 scopus 로고    scopus 로고
    • Loss of HDAC6, a novel CHIP substrate, alleviates abnormal tau accumulation
    • PMID: 22492994
    • Cook C, Gendron TF, Scheffel K, Carlomagno Y, Dunmore J, DeTure M, et al. Loss of HDAC6, a novel CHIP substrate, alleviates abnormal tau accumulation. Hum Mol Genet. 2012; 21: 2936-2945. doi: 10.1093/hmg/dds125 PMID: 22492994
    • (2012) Hum Mol Genet , vol.21 , pp. 2936-2945
    • Cook, C.1    Gendron, T.F.2    Scheffel, K.3    Carlomagno, Y.4    Dunmore, J.5    DeTure, M.6
  • 32
    • 79953311481 scopus 로고    scopus 로고
    • HDAC6 α-tubulin deacetylase: A potential therapeutic target in neurodegenerative diseases
    • PMID: 21377170
    • Li G, Jiang H, Chang M, Xie H, Hu L. HDAC6 α-tubulin deacetylase: a potential therapeutic target in neurodegenerative diseases. J Neurol Sci. 2011; 304: 1-8. doi: 10.1016/j.jns.2011.02.017 PMID: 21377170
    • (2011) J Neurol Sci , vol.304 , pp. 1-8
    • Li, G.1    Jiang, H.2    Chang, M.3    Xie, H.4    Hu, L.5
  • 33
    • 84885430428 scopus 로고    scopus 로고
    • Prefrontal cortical dysfunction after overexpression of histone deacetylase 1
    • PMID: 23664640
    • Jakovcevski M, Bharadwaj R, Straubhaar J, Gao G, Gavin DP, Jakovcevski I, et al. Prefrontal cortical dysfunction after overexpression of histone deacetylase 1. Biol Psychiatry. 2013; 74: 696-705. doi: 10.1016/j.biopsych.2013.03.020 PMID: 23664640
    • (2013) Biol Psychiatry , vol.74 , pp. 696-705
    • Jakovcevski, M.1    Bharadwaj, R.2    Straubhaar, J.3    Gao, G.4    Gavin, D.P.5    Jakovcevski, I.6
  • 34
    • 84872458837 scopus 로고    scopus 로고
    • The role of HDAC6 in Alzheimer's disease
    • PMID: 22936009
    • Zhang L, Sheng S, Qin C. The role of HDAC6 in Alzheimer's disease. J Alzheimers Dis JAD. 2013; 33: 283-295. doi: 10.3233/JAD-2012-120727 PMID: 22936009
    • (2013) J Alzheimers Dis JAD , vol.33 , pp. 283-295
    • Zhang, L.1    Sheng, S.2    Qin, C.3
  • 35
    • 84916605627 scopus 로고    scopus 로고
    • c-Abl stabilizes HDAC2 levels by tyrosine phosphorylation repressing neuronal gene expression in Alzheimer's disease
    • PMID: 25219501
    • Gonzalez-Zuñiga M, Contreras PS, Estrada LD, Chamorro D, Villagra A, Zanlungo S, et al. c-Abl stabilizes HDAC2 levels by tyrosine phosphorylation repressing neuronal gene expression in Alzheimer's disease. Mol Cell. 2014; 56: 163-173. doi: 10.1016/j.molcel.2014.08.013 PMID: 25219501
    • (2014) Mol Cell , vol.56 , pp. 163-173
    • Gonzalez-Zuñiga, M.1    Contreras, P.S.2    Estrada, L.D.3    Chamorro, D.4    Villagra, A.5    Zanlungo, S.6
  • 36
    • 84862777943 scopus 로고    scopus 로고
    • An epigenetic blockade of cognitive functions in the neurodegenerating brain
    • PMID: 22388814
    • Gräff J, Rei D, Guan J-S, Wang W-Y, Seo J, Hennig KM, et al. An epigenetic blockade of cognitive functions in the neurodegenerating brain. Nature. 2012; 483: 222-226. doi: 10.1038/nature10849 PMID: 22388814
    • (2012) Nature , vol.483 , pp. 222-226
    • Gräff, J.1    Rei, D.2    Guan, J.-S.3    Wang, W.-Y.4    Seo, J.5    Hennig, K.M.6
  • 37
    • 79959208615 scopus 로고    scopus 로고
    • Age-related macular degeneration (AMD): Alzheimer's disease in the eye?
    • PMID: 21297256
    • Kaarniranta K, Salminen A, Haapasalo A, Soininen H, Hiltunen M. Age-related macular degeneration (AMD): Alzheimer's disease in the eye? J Alzheimers Dis. 2011; 24: 615-631. doi: 10.3233/JAD-2011-101908 PMID: 21297256
    • (2011) J Alzheimers Dis , vol.24 , pp. 615-631
    • Kaarniranta, K.1    Salminen, A.2    Haapasalo, A.3    Soininen, H.4    Hiltunen, M.5
  • 38
    • 79958098579 scopus 로고    scopus 로고
    • Parallel findings in age-related macular degeneration and Alzheimer's disease
    • PMID: 21440663
    • Ohno-Matsui K. Parallel findings in age-related macular degeneration and Alzheimer's disease. Prog Retin Eye Res. 2011; 30: 217-238. doi: 10.1016/j.preteyeres.2011.02.004 PMID: 21440663
    • (2011) Prog Retin Eye Res , vol.30 , pp. 217-238
    • Ohno-Matsui, K.1
  • 39
    • 84903864398 scopus 로고    scopus 로고
    • Histone deacetylase expression patterns in developing murine optic nerve
    • PMID: 25011550
    • Tiwari S, Dharmarajan S, Shivanna M, Otteson DC, Belecky-Adams TL. Histone deacetylase expression patterns in developing murine optic nerve. BMC Dev Biol. 2014; 14: 30. doi: 10.1186/1471-213X-14-30 PMID: 25011550
    • (2014) BMC Dev Biol , vol.14 , pp. 30
    • Tiwari, S.1    Dharmarajan, S.2    Shivanna, M.3    Otteson, D.C.4    Belecky-Adams, T.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.