-
1
-
-
84898761737
-
Atomic model of the F420-reducing [NiFe] hydrogenase by electron cryo-microscopy using a direct electron detector
-
Allegretti, M., Mills, D.J., McMullan, G., Kühlbrandt, W., Vonck, J., 2014. Atomic model of the F420-reducing [NiFe] hydrogenase by electron cryo-microscopy using a direct electron detector. eLife 3, e01963. doi:10.7554/eLife.01963
-
(2014)
eLife
, vol.3
-
-
Allegretti, M.1
Mills, D.J.2
McMullan, G.3
Kühlbrandt, W.4
Vonck, J.5
-
2
-
-
76749094569
-
The resolution dependence of optimal exposures in liquid nitrogen temperature electron cryomicroscopy of catalase crystals
-
Baker, L.A., Smith, E.A., Bueler, S.A., Rubinstein, J.L., 2010. The resolution dependence of optimal exposures in liquid nitrogen temperature electron cryomicroscopy of catalase crystals. J Struct Biol 169, 431-437. doi:10.1016/j.jsb.2009.11.014
-
(2010)
J Struct Biol
, vol.169
, pp. 431-437
-
-
Baker, L.A.1
Smith, E.A.2
Bueler, S.A.3
Rubinstein, J.L.4
-
3
-
-
84905974179
-
Structure of - galactosidase at 3 2-A resolution obtained by cryo-electron microscopy
-
Bartesaghi, A., Matthies, D., Banerjee, S., Merk, A., Subramaniam, S., 2014. Structure of - galactosidase at 3.2-A resolution obtained by cryo-electron microscopy. Proc. Natl. Acad. Sci. 111, 11709-11714. doi:10.1073/pnas.1402809111
-
(2014)
Proc. Natl. Acad. Sci
, vol.111
, pp. 11709-11714
-
-
Bartesaghi, A.1
Matthies, D.2
Banerjee, S.3
Merk, A.4
Subramaniam, S.5
-
4
-
-
84862783740
-
Beam-induced motion of vitrified specimen on holey carbon film
-
Brilot, A.F., Chen, J.Z., Cheng, A., Pan, J., Harrison, S.C., Potter, C.S., Carragher, B., Henderson, R., Grigorieff, N., 2012. Beam-induced motion of vitrified specimen on holey carbon film. J. Struct. Biol. 177, 630-7. doi:10.1016/j.jsb.2012.02.003
-
(2012)
J. Struct. Biol
, vol.177
, pp. 630-637
-
-
Brilot, A.F.1
Chen, J.Z.2
Cheng, A.3
Pan, J.4
Harrison, S.C.5
Potter, C.S.6
Carragher, B.7
Henderson, R.8
Grigorieff, N.9
-
5
-
-
84868573207
-
Movies of ice-embedded particles enhance resolution in electron cryo-microscopy
-
Campbell, M.G., Cheng, A., Brilot, A.F., Moeller, A., Lyumkis, D., Veesler, D., Pan, J., Harrison, S.C., Potter, C.S., Carragher, B., Grigorieff, N., 2012. Movies of ice-embedded particles enhance resolution in electron cryo-microscopy. Structure 20, 1823-8. doi:10.1016/j.str.2012.08.026
-
(2012)
Structure
, vol.20
, pp. 1823-1828
-
-
Campbell, M.G.1
Cheng, A.2
Brilot, A.F.3
Moeller, A.4
Lyumkis, D.5
Veesler, D.6
Pan, J.7
Harrison, S.C.8
Potter, C.S.9
Carragher, B.10
Grigorieff, N.11
-
6
-
-
84924617498
-
2.8 Å resolution reconstruction of the Thermoplasma acidophilum 20 S proteasome using cryo-electron microscopy
-
10.7554/eLife.06380
-
Campbell, M.G., Veesler, D., Cheng, A., Potter, C.S., Carragher, B., 2015. 2.8 Å resolution reconstruction of the Thermoplasma acidophilum 20 S proteasome using cryo-electron microscopy. eLife 10.7554/eLife.06380. doi:10.7554/eLife.03665
-
(2015)
eLife
-
-
Campbell, M.G.1
Veesler, D.2
Cheng, A.3
Potter, C.S.4
Carragher, B.5
-
7
-
-
84928379119
-
A Primer to Single-Particle Cryo- Electron Microscopy
-
Cheng, Y., Grigorieff, N., Penczek, P. A., & Walz, T. (2015). A Primer to Single-Particle Cryo- Electron Microscopy. Cell, 161(3), 438-449.
-
(2015)
Cell
, vol.161
, Issue.3
, pp. 438-449
-
-
Cheng, Y.1
Grigorieff, N.2
Penczek, P.A.3
Walz, T.4
-
8
-
-
0027853061
-
The effects of radiation damage on the structure of frozen hydrated HSV-1 capsids
-
Conway, J.F., Trus, B.L., Booy, F.P., Newcomb, W.W., Brown, J.C., Steven, A.C., 1993. The effects of radiation damage on the structure of frozen hydrated HSV-1 capsids. J Struct Biol 111, 222-233. doi:10.1006/jsbi.1993.1052
-
(1993)
J Struct Biol
, vol.111
, pp. 222-233
-
-
Conway, J.F.1
Trus, B.L.2
Booy, F.P.3
Newcomb, W.W.4
Brown, J.C.5
Steven, A.C.6
-
9
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W.G., Cowtan, K., 2010. Features and development of Coot. Acta Crystallogr. D. Biol. Crystallogr. 66, 486-501. doi:10.1107/S0907444910007493
-
(2010)
Acta Crystallogr. D. Biol. Crystallogr
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
10
-
-
84871767005
-
Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles
-
Estrozi, L.F., Settembre, E.C., Goret, G., McClain, B., Zhang, X., Chen, J.Z., Grigorieff, N., Harrison, S.C., 2013. Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles. J Mol Biol. 425,124-132. doi:10.1016/j.jmb.2012.10.011
-
(2013)
J Mol Biol
, vol.425
, pp. 124-132
-
-
Estrozi, L.F.1
Settembre, E.C.2
Goret, G.3
McClain, B.4
Zhang, X.5
Chen, J.Z.6
Grigorieff, N.7
Harrison, S.C.8
-
11
-
-
35549001684
-
Electronic detectors for electron microscopy
-
Faruqi, A.R., Henderson, R., 2007. Electronic detectors for electron microscopy. Curr Opin Struct Biol 17, 549-555. doi:10.1016/j.sbi.2007.08.014
-
(2007)
Curr Opin Struct Biol
, vol.17
, pp. 549-555
-
-
Faruqi, A.R.1
Henderson, R.2
-
12
-
-
33846036476
-
Specific radiation damage to acidic residues and its relation to their chemical and structural environment
-
Fioravanti, E., Vellieux, F.M.D., Amara, P., Madern, D., Weik, M. 2006. Specific radiation damage to acidic residues and its relation to their chemical and structural environment. J Synchrotron Radiation 14, 84-91. doi:10.1107/S0909049506038623.
-
(2006)
J Synchrotron Radiation
, vol.14
, pp. 84-91
-
-
Fioravanti, E.1
Vellieux, F.M.D.2
Amara, P.3
Madern, D.4
Weik, M.5
-
13
-
-
84922595259
-
Seeing tobacco mosaic virus through direct electron detectors
-
Fromm, S.A., Bharat, T.A.M., Jakobi, A.J., Hagen, W.J.H., Sachse, C. 2015. Seeing tobacco mosaic virus through direct electron detectors. J Struct Biol 189, 87-97. doi:10.1016/j.jsb.2014.12.002
-
(2015)
J Struct Biol
, vol.189
, pp. 87-97
-
-
Fromm, S.A.1
Bharat, T.A.M.2
Jakobi, A.J.3
Hagen, W.J.H.4
Sachse, C.5
-
14
-
-
0015106320
-
Limitations to significant information in biological electron microscopy as a result of radiation damage
-
Glaeser, R.M., 1971. Limitations to significant information in biological electron microscopy as a result of radiation damage. J. Ultrastruct. Res. 36, 466-482. doi:10.1016/S0022- 5320(71)80118-1
-
(1971)
J. Ultrastruct. Res
, vol.36
, pp. 466-482
-
-
Glaeser, R.M.1
-
15
-
-
78349286395
-
Images of paraffin monolayer crystals with perfect contrast: Minimization of beam-induced specimen motion
-
Glaeser, R.M., McMullan, G., Faruqi, A.R., Henderson, R., 2011. Images of paraffin monolayer crystals with perfect contrast: minimization of beam-induced specimen motion. Ultramicroscopy 111, 90-100. doi:10.1016/j.ultramic.2010.10.010
-
(2011)
Ultramicroscopy
, vol.111
, pp. 90-100
-
-
Glaeser, R.M.1
McMullan, G.2
Faruqi, A.R.3
Henderson, R.4
-
16
-
-
0033777020
-
Resolution measurement in structures derived from single particles
-
Grigorieff, N., 2000. Resolution measurement in structures derived from single particles. Acta Crystallogr D Biol Crystallogr 56, 1270-1277.
-
(2000)
Acta Crystallogr D Biol Crystallogr
, vol.56
, pp. 1270-1277
-
-
Grigorieff, N.1
-
17
-
-
79953108462
-
Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy
-
Grigorieff, N., Harrison, S.C., 2011. Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopy. Curr. Opin. Struct. Biol. 21, 265-73. doi:10.1016/j.sbi.2011.01.008
-
(2011)
Curr. Opin. Struct. Biol
, vol.21
, pp. 265-273
-
-
Grigorieff, N.1
Harrison, S.C.2
-
18
-
-
0018333925
-
Radiation damage of purple membrane at low temperature
-
Hayward, S.B., Glaeser, R.M., 1979. Radiation damage of purple membrane at low temperature. Ultramicroscopy 04, 201-10.
-
(1979)
Ultramicroscopy
, vol.4
, pp. 201-210
-
-
Hayward, S.B.1
Glaeser, R.M.2
-
19
-
-
0029003107
-
The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules
-
Henderson, R., 1995. The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules. Q Rev Biophys 28, 171-193.
-
(1995)
Q Rev Biophys
, vol.28
, pp. 171-193
-
-
Henderson, R.1
-
20
-
-
80855132610
-
Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy
-
Henderson, R., Chen, S., Chen, J.Z., Grigorieff, N., Passmore, L.A., Ciccarelli, L., Rubinstein, J.L., Crowther, R.A., Stewart, P.L., Rosenthal, P.B., 2011. Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy. J. Mol. Biol. 413, 1028-46. doi:10.1016/j.jmb.2011.09.008
-
(2011)
J. Mol. Biol
, vol.413
, pp. 1028-1046
-
-
Henderson, R.1
Chen, S.2
Chen, J.Z.3
Grigorieff, N.4
Passmore, L.A.5
Ciccarelli, L.6
Rubinstein, J.L.7
Crowther, R.A.8
Stewart, P.L.9
Rosenthal, P.B.10
-
21
-
-
0031574325
-
Not your average density
-
Kleywegt, G.J., Read, R.J., 1997. Not your average density. Structure 5, 1557-1569. doi:10.1016/S0969-2126(97)00305-5
-
(1997)
Structure
, vol.5
, pp. 1557-1569
-
-
Kleywegt, G.J.1
Read, R.J.2
-
22
-
-
84880848354
-
Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM
-
Li, X., Mooney, P., Zheng, S., Booth, C.R., Braunfeld, M.B., Gubbens, S., Agard, D.A., Cheng, Y., 2013. Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM. Nat. Methods 10, 584-90. doi:10.1038/nmeth.2472
-
(2013)
Nat. Methods
, vol.10
, pp. 584-590
-
-
Li, X.1
Mooney, P.2
Zheng, S.3
Booth, C.R.4
Braunfeld, M.B.5
Gubbens, S.6
Agard, D.A.7
Cheng, Y.8
-
23
-
-
84889607320
-
Structure of the TRPV1 ion channel determined by electron cryo-microscopy
-
Liao, M., Cao, E., Julius, D., Cheng, Y., 2013. Structure of the TRPV1 ion channel determined by electron cryo-microscopy. Nature 504, 107-12. doi:10.1038/nature12822
-
(2013)
Nature
, vol.504
, pp. 107-112
-
-
Liao, M.1
Cao, E.2
Julius, D.3
Cheng, Y.4
-
24
-
-
84883447961
-
Likelihood-based classification of cryo-EM images using FREALIGN
-
Lyumkis, D., Brilot, A.F., Theobald, D.L., Grigorieff, N., 2013. Likelihood-based classification of cryo-EM images using FREALIGN. J. Struct. Biol. 183, 377-88. doi:10.1016/j.jsb.2013.07.005
-
(2013)
J. Struct. Biol
, vol.183
, pp. 377-388
-
-
Lyumkis, D.1
Brilot, A.F.2
Theobald, D.L.3
Grigorieff, N.4
-
25
-
-
0035794638
-
Atomic structure of the major capsid protein of rotavirus: Implications for the architecture of the virion
-
Mathieu, M., Petitpas, I., Navaza, J., Lepault, J., Kohli, E., Pothier, P., Prasad, B. V, Cohen, J., Rey F.A., 2001. Atomic structure of the major capsid protein of rotavirus: implications for the architecture of the virion. EMBO J. 20, 1485-97. doi:10.1093/emboj/20.7.1485
-
(2001)
EMBO J
, vol.20
, pp. 1485-1497
-
-
Mathieu, M.1
Petitpas, I.2
Navaza, J.3
Lepault, J.4
Kohli, E.5
Pothier, P.6
Prasad, B.V.7
Cohen, J.8
Rey, F.A.9
-
26
-
-
77349116567
-
X-ray crystal structure of the rotavirus inner capsid particle at 3 8 A resolution
-
McClain, B., Settembre, E., Temple, B.R.S., Bellamy, A.R., Harrison, S.C., 2010. X-ray crystal structure of the rotavirus inner capsid particle at 3.8 A resolution. J. Mol. Biol. 397, 587-99. doi:10.1016/j.jmb.2010.01.055
-
(2010)
J. Mol. Biol
, vol.397
, pp. 587-599
-
-
McClain, B.1
Settembre, E.2
Temple, B.R.S.3
Bellamy, A.R.4
Harrison, S.C.5
-
27
-
-
84908056429
-
Comparison of optimal performance at 300keV of three direct electron detectors for use in low dose electron microscopy
-
McMullan, G., Faruqi, A.R., Clare, D., Henderson, R., 2014. Comparison of optimal performance at 300keV of three direct electron detectors for use in low dose electron microscopy. Ultramicroscopy 147, 156-63. doi:10.1016/j.ultramic.2014.08.002
-
(2014)
Ultramicroscopy
, vol.147
, pp. 156-163
-
-
McMullan, G.1
Faruqi, A.R.2
Clare, D.3
Henderson, R.4
-
28
-
-
20544451502
-
Active pixel sensor array as a detector for electron microscopy
-
Milazzo, A.-C., Leblanc, P., Duttweiler, F., Jin, L., Bouwer, J.C., Peltier, S., Ellisman, M., Bieser, F., Matis, H.S., Wieman, H., Denes, P., Kleinfelder, S., Xuong, N.-H., 2005. Active pixel sensor array as a detector for electron microscopy. Ultramicroscopy 104, 152-9. doi:10.1016/j.ultramic.2005.03.006
-
(2005)
Ultramicroscopy
, vol.104
, pp. 152-159
-
-
Milazzo, A.-C.1
Leblanc, P.2
Duttweiler, F.3
Jin, L.4
Bouwer, J.C.5
Peltier, S.6
Ellisman, M.7
Bieser, F.8
Matis, H.S.9
Wieman, H.10
Denes, P.11
Kleinfelder, S.12
Xuong, N.-H.13
-
29
-
-
4444221565
-
UCSF Chimera--a visualization system for exploratory research and analysis
-
Pettersen, E.F., Goddard, T.D., Huang, C.C., Couch, G.S., Greenblatt, D.M., Meng, E.C., Ferrin, T.E., 2004. UCSF Chimera--a visualization system for exploratory research and analysis. J Comput Chem 25, 1605-1612. doi:10.1002/jcc. 20084
-
(2004)
J Comput Chem
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
30
-
-
0142042865
-
Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy
-
Rosenthal, P.B., Henderson, R., 2003. Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy. J Mol Biol 333, 721-745.
-
(2003)
J Mol Biol
, vol.333
, pp. 721-745
-
-
Rosenthal, P.B.1
Henderson, R.2
-
31
-
-
84888064039
-
Quantitative characterization of electron detectors for transmission electron microscopy
-
Ruskin, R.S., Yu, Z., Grigorieff, N., 2013. Quantitative characterization of electron detectors for transmission electron microscopy. J. Struct. Biol. 184, 385-93. doi:10.1016/j.jsb.2013.10.016
-
(2013)
J. Struct. Biol
, vol.184
, pp. 385-393
-
-
Ruskin, R.S.1
Yu, Z.2
Grigorieff, N.3
-
32
-
-
84920942671
-
Beam-induced motion correction for sub-megadalton cryo-EM particles
-
Scheres, S.H., 2014. Beam-induced motion correction for sub-megadalton cryo-EM particles. eLife 3, e03665. doi:10.7554/eLife.03665
-
(2014)
eLife
, vol.3
-
-
Scheres, S.H.1
-
33
-
-
84866997559
-
Optimal noise reduction in 3D reconstructions of single particles using a volume-normalized filter
-
Sindelar, C. V, Grigorieff, N., 2012. Optimal noise reduction in 3D reconstructions of single particles using a volume-normalized filter. J. Struct. Biol. 180, 26-38. doi:10.1016/j.jsb.2012.05.005
-
(2012)
J. Struct. Biol
, vol.180
, pp. 26-38
-
-
Sindelar, C.V.1
Grigorieff, N.2
-
34
-
-
0030174932
-
Electron radiation damage to protein crystals of bacteriorhodopsin at different temperatures
-
Stark, H., Zemlin, F., Boettcher, C., 1996. Electron radiation damage to protein crystals of bacteriorhodopsin at different temperatures. Ultramicroscopy 63, 75-80.
-
(1996)
Ultramicroscopy
, vol.63
, pp. 75-80
-
-
Stark, H.1
Zemlin, F.2
Boettcher, C.3
-
35
-
-
0019991062
-
Sequence diversity of human rotavirus strains investigated by northern blot hybridization analysis
-
Street, J.E., Croxson, M.C., Chadderton, W.F., Bellamy, A.R., 1982. Sequence diversity of human rotavirus strains investigated by northern blot hybridization analysis. J. Virol. 43, 369-78.
-
(1982)
J. Virol
, vol.43
, pp. 369-378
-
-
Street, J.E.1
Croxson, M.C.2
Chadderton, W.F.3
Bellamy, A.R.4
-
36
-
-
33845332754
-
EMAN2: An extensible image processing suite for electron microscopy
-
Tang, G., Peng, L., Baldwin, P. R., Mann, D. S., Jiang, W., Rees, I., & Ludtke, S. J. (2007). EMAN2: an extensible image processing suite for electron microscopy. Journal of Structural Biology, 157(1), 38-46.
-
(2007)
Journal of Structural Biology
, vol.157
, Issue.1
, pp. 38-46
-
-
Tang, G.1
Peng, L.2
Baldwin, P.R.3
Mann, D.S.4
Jiang, W.5
Rees, I.6
Ludtke, S.J.7
-
37
-
-
0016688080
-
Molecular structure determination by electron microscopy of unstained crystalline specimens
-
Unwin, P.N., Henderson, R., 1975. Molecular structure determination by electron microscopy of unstained crystalline specimens. J. Mol. Biol. 94, 425-40.
-
(1975)
J. Mol. Biol
, vol.94
, pp. 425-440
-
-
Unwin, P.N.1
Henderson, R.2
-
38
-
-
0022734418
-
Resolution criteria for three-dimensional reconstruction
-
Van Heel, M., Harauz, G., 1986. Resolution criteria for three-dimensional reconstruction. Optik (Stuttg). 73, 119-122.
-
(1986)
Optik (Stuttg)
, vol.73
, pp. 119-122
-
-
Van Heel, M.1
Harauz, G.2
-
39
-
-
0029916485
-
A new generation of the IMAGIC image processing system
-
Van Heel, M., Harauz, G., Orlova, E. V, Schmidt, R., Schatz, M., 1996. A new generation of the IMAGIC image processing system. J Struct Biol 116, 17-24. doi:10.1006/jsbi.1996.0004
-
(1996)
J Struct Biol
, vol.116
, pp. 17-24
-
-
Van Heel, M.1
Harauz, G.2
Orlova, E.V.3
Schmidt, R.4
Schatz, M.5
-
40
-
-
77950914670
-
Subunit interactions in bovine papillomavirus
-
Wolf, M., Garcea, R.L., Grigorieff, N. & Harrison, S.C., 2010. Subunit interactions in bovine papillomavirus. PNAS 107, 6298-6303. doi:10.1073/pnas.0914604107
-
(2010)
PNAS
, vol.107
, pp. 6298-6303
-
-
Wolf, M.1
Garcea, R.L.2
Grigorieff, N.3
Harrison, S.C.4
-
41
-
-
84905080837
-
Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine
-
Wong, W., Bai, X., Brown, A., Fernandez, I.S., Hanssen, E., Condron, M., Tan, Y.H., Baum, J., Scheres, S.H.W., 2014. Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. eLife 3, e03080. doi:10.7554/eLife.03080
-
(2014)
eLife
, vol.3
-
-
Wong, W.1
Bai, X.2
Brown, A.3
Fernandez, I.S.4
Hanssen, E.5
Condron, M.6
Tan, Y.H.7
Baum, J.8
Scheres, S.H.W.9
-
42
-
-
33745239582
-
An analytical expression for electron elastic scattering cross section from atoms and molecules in 1 0 keV to 1. 0 MeV energy range
-
Yalcin, S., Gurler, O., Gultekin, A., Gundogdu, O., 2006. An analytical expression for electron elastic scattering cross section from atoms and molecules in 1.0 keV to 1.0 MeV energy range. Phys. Lett. A 356, 138-145. doi:10.1016/j.physleta.2006.04.037
-
(2006)
Phys. Lett. A
, vol.356
, pp. 138-145
-
-
Yalcin, S.1
Gurler, O.2
Gultekin, A.3
Gundogdu, O.4
-
43
-
-
41149086034
-
Near-atomic resolution using electron cryo-microscopy and single particle reconstruction
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Zhang, X., Settembre, E., Xu, C., Dormitzer, P.R., Bellamy, R., Harrison, S.C. & Grigorieff, N., 2008. Near-atomic resolution using electron cryo-microscopy and single particle reconstruction. PNAS 105, 1867-1872. doi:10.1073/pnas.0711623105
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(2008)
PNAS
, vol.105
, pp. 1867-1872
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Zhang, X.1
Settembre, E.2
Xu, C.3
Dormitzer, P.R.4
Bellamy, R.5
Harrison, S.C.6
Grigorieff, N.7
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