-
1
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders, S., and Huber, W. (2010). Differential expression analysis for sequence count data. Genome Biol. 11:R106. doi: 10.1186/gb-2010-11-10-r106.
-
(2010)
Genome Biol
, vol.11
, pp. R106
-
-
Anders, S.1
Huber, W.2
-
2
-
-
77954452005
-
Pseudo-outbreak of Cupriavidus pauculus infection at an outpatient clinic related to rinsing culturette swabs in tap water
-
Balada-Llasat, J. M., Elkins, C., Swyers, L., Bannerman, T., and Pancholi, P. (2010). Pseudo-outbreak of Cupriavidus pauculus infection at an outpatient clinic related to rinsing culturette swabs in tap water. J. Clin. Microbiol. 48, 2645-2647. doi: 10.1128/JCM.01874-09.
-
(2010)
J. Clin. Microbiol
, vol.48
, pp. 2645-2647
-
-
Balada-Llasat, J.M.1
Elkins, C.2
Swyers, L.3
Bannerman, T.4
Pancholi, P.5
-
3
-
-
33748468927
-
Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation
-
Bates, J. M., Mittge, E., Kuhlman, J., Baden, K. N., Cheesman, S. E., and Guillemin, K. (2006). Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation. Dev. Biol. 297, 374-386. doi: 10.1016/j.ydbio.2006.05.006.
-
(2006)
Dev. Biol
, vol.297
, pp. 374-386
-
-
Bates, J.M.1
Mittge, E.2
Kuhlman, J.3
Baden, K.N.4
Cheesman, S.E.5
Guillemin, K.6
-
4
-
-
0037232633
-
Nutritive metal uptake in teleost fish
-
Bury, N. R., Walker, P. A., and Glover, C. N. (2003). Nutritive metal uptake in teleost fish. J. Exp. Biol. 206, 11-23. doi: 10.1242/jeb.00068.
-
(2003)
J. Exp. Biol
, vol.206
, pp. 11-23
-
-
Bury, N.R.1
Walker, P.A.2
Glover, C.N.3
-
5
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., et al. (2010). QIIME allows analysis of high-throughput community sequencing data. Nat. Meth. 7, 335-336. doi: 10.1038/nmeth.f.303.
-
(2010)
Nat. Meth
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
6
-
-
0348226757
-
Physiological modulation of iron metabolism in rainbow trout (Oncorhynchus mykiss) fed low and high iron diets
-
Carriquiriborde, P., Handy, R. D., and Davies, S. J. (2004). Physiological modulation of iron metabolism in rainbow trout (Oncorhynchus mykiss) fed low and high iron diets. J. Exp. Biol. 207, 75-86. doi: 10.1242/jeb.00712.
-
(2004)
J. Exp. Biol
, vol.207
, pp. 75-86
-
-
Carriquiriborde, P.1
Handy, R.D.2
Davies, S.J.3
-
7
-
-
33846884644
-
Stanniocalcin-1 regulates endothelial gene expression and modulates transendothelial migration of leukocytes
-
Chakraborty, A., Brooks, H., Zhang, P., Smith, W., McReynolds, M. R., Hoying, J. B., et al. (2007). Stanniocalcin-1 regulates endothelial gene expression and modulates transendothelial migration of leukocytes. Am. J. Physiol. Renal. Physiol. 292, F895-F904. doi: 10.1152/ajprenal.00219.2006.
-
(2007)
Am. J. Physiol. Renal. Physiol
, vol.292
, pp. F895-F904
-
-
Chakraborty, A.1
Brooks, H.2
Zhang, P.3
Smith, W.4
McReynolds, M.R.5
Hoying, J.B.6
-
8
-
-
84892394507
-
Plesiomonas shigelloides infection in Southeast China
-
Chen, X., Chen, Y., Yang, Q., Kong, H., Yu, F., Han, D., et al. (2013). Plesiomonas shigelloides infection in Southeast China. PLoS ONE 8:e77877. doi: 10.1371/journal.pone.0077877.
-
(2013)
PLoS ONE
, vol.8
-
-
Chen, X.1
Chen, Y.2
Yang, Q.3
Kong, H.4
Yu, F.5
Han, D.6
-
9
-
-
34248183559
-
Trabulsiella odontotermitis sp. nov., isolated from the gut of the termite Odontotermes formosanus Shiraki
-
Chou, J. H., Chen, W. M., Arun, A. B., and Young, C. C. (2007). Trabulsiella odontotermitis sp. nov., isolated from the gut of the termite Odontotermes formosanus Shiraki. Int. J. Syst. Evol. Microbiol. 57, 696-700. doi: 10.1099/ijs.0.64632-0.
-
(2007)
Int. J. Syst. Evol. Microbiol
, vol.57
, pp. 696-700
-
-
Chou, J.H.1
Chen, W.M.2
Arun, A.B.3
Young, C.C.4
-
10
-
-
84898549241
-
Intestinal microbiota in fishes: what's known and what's not
-
Clements, K. D., Angert, E. R., Montgomery, W. L., and Choat, J. H. (2014). Intestinal microbiota in fishes: what's known and what's not. Mol. Ecol. 23, 1891-1898. doi: 10.1111/mec.12699.
-
(2014)
Mol. Ecol
, vol.23
, pp. 1891-1898
-
-
Clements, K.D.1
Angert, E.R.2
Montgomery, W.L.3
Choat, J.H.4
-
11
-
-
0017615625
-
Reduction of iron and synthesis of protoheme by Spirillum itersonii and other organisms
-
Dailey, H. A., and Lascelles, J. (1977). Reduction of iron and synthesis of protoheme by Spirillum itersonii and other organisms. J. Bacteriol. 129, 815-820.
-
(1977)
J. Bacteriol
, vol.129
, pp. 815-820
-
-
Dailey, H.A.1
Lascelles, J.2
-
12
-
-
84879068005
-
Context-dependent competition in a model gut bacterial community
-
De Muinck, E. J., Stenseth, N. C., Sachse, D., Van der Roost, J., Rønningen, K. S., Rudi, K., et al. (2013). Context-dependent competition in a model gut bacterial community. PLoS ONE 8:e67210. doi: 10.1371/journal.pone.0067210.
-
(2013)
PLoS ONE
, vol.8
-
-
De Muinck, E.J.1
Stenseth, N.C.2
Sachse, D.3
Van der Roost, J.4
Rønningen, K.S.5
Rudi, K.6
-
13
-
-
33747827586
-
NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes
-
DeSantis, T. Z., Hugenholtz, P., Keller, K., Brodie, E. L., Larsen, N., Piceno, Y. M., et al. (2006). NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes. Nucleic Acids Res. 34, W394-W399. doi: 10.1093/nar/gkl244.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W394-W399
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Keller, K.3
Brodie, E.L.4
Larsen, N.5
Piceno, Y.M.6
-
14
-
-
84880136021
-
Rhodobacteraceae are the key members of the microbial community of the initial biofilm formed in Eastern Mediterannean coastal seawater
-
Elifantz, H., Horn, G., Ayon, M., Cohen, Y., and Minz, D. (2013). Rhodobacteraceae are the key members of the microbial community of the initial biofilm formed in Eastern Mediterannean coastal seawater. FEMS Microbiol. Ecol. 85, 348-357. doi: 10.1111/1574-6941.12122.
-
(2013)
FEMS Microbiol. Ecol
, vol.85
, pp. 348-357
-
-
Elifantz, H.1
Horn, G.2
Ayon, M.3
Cohen, Y.4
Minz, D.5
-
15
-
-
84878232951
-
Phylogenetic analysis of Burkholderia species by multilocus sequence analysis
-
Estrada-de los Santos, P., Vinuesa, P., Martinez-Aguilar, L., Hirsch, A. M., and Caballero-Mellado, J. (2013). Phylogenetic analysis of Burkholderia species by multilocus sequence analysis. Curr. Microbiol. 67, 51-60. doi: 10.1007/s00284-013-0330-9.
-
(2013)
Curr. Microbiol
, vol.67
, pp. 51-60
-
-
Estrada-de los Santos, P.1
Vinuesa, P.2
Martinez-Aguilar, L.3
Hirsch, A.M.4
Caballero-Mellado, J.5
-
16
-
-
0035907008
-
Genetic analysis of digestive physiology using fluorescent phospholipid reporters
-
Farber, S. A., Pack, M., Ho, S.-Y., Johnson, I. D., Wagner, D. S., Dosch, R., et al. (2001). Genetic analysis of digestive physiology using fluorescent phospholipid reporters. Science 292, 1385-1388. doi: 10.1126/science.1060418.
-
(2001)
Science
, vol.292
, pp. 1385-1388
-
-
Farber, S.A.1
Pack, M.2
Ho, S.-Y.3
Johnson, I.D.4
Wagner, D.S.5
Dosch, R.6
-
17
-
-
77952638155
-
'Order VI. Legionellales ord. nov'
-
eds D. J. Brenner, N. R. Krieg, J. J. Staley, and G. M. Garrity (New York, NY: Springer)
-
Garrity, G. M., Bell, J. A., and Lilburn, T. (2005). "Order VI. Legionellales ord. nov, "in Bergey's Manual of Systematic Bacteriology, eds D. J. Brenner, N. R. Krieg, J. J. Staley, and G. M. Garrity (New York, NY: Springer), 210-236.
-
(2005)
Bergey's Manual of Systematic Bacteriology
, pp. 210-236
-
-
Garrity, G.M.1
Bell, J.A.2
Lilburn, T.3
-
18
-
-
84885953363
-
Prebiotic effects of arabinoxylan oligosaccharides on juvenile Siberian sturgeon (Acipenser baerii) with emphasis on the modulation of the gut microbiota using 454 pyrosequencing
-
Geraylou, Z., Souffreau, C., Rurangwa, E., Maes, G. E., Spanier, K. I., Courtin, C. M., et al. (2013). Prebiotic effects of arabinoxylan oligosaccharides on juvenile Siberian sturgeon (Acipenser baerii) with emphasis on the modulation of the gut microbiota using 454 pyrosequencing. FEMS Microbiol. Ecol. 86, 257-371. doi: 10.1111/1574-6941.12169.
-
(2013)
FEMS Microbiol. Ecol
, vol.86
, pp. 257-371
-
-
Geraylou, Z.1
Souffreau, C.2
Rurangwa, E.3
Maes, G.E.4
Spanier, K.I.5
Courtin, C.M.6
-
19
-
-
70349770153
-
Do herbivorous minnows have "plug-flow reactor" guts? Evidence from digestive enzyme activities, gastrointestinal fermentation, and luminal nutrient concentrations
-
German, D. P. (2009). Do herbivorous minnows have "plug-flow reactor" guts? Evidence from digestive enzyme activities, gastrointestinal fermentation, and luminal nutrient concentrations. J. Comp. Physiol. B 179, 759-771. doi: 10.1007/s00360-009-0359-z.
-
(2009)
J. Comp. Physiol. B
, vol.179
, pp. 759-771
-
-
German, D.P.1
-
21
-
-
78149500254
-
A reference growth curve for nutrition experiments in zebrafish (Danio rerio) and changes in whole body proteome during development
-
Gomez-Requeni, P., Conceicao, L. E. C., Olderbakk Jordal, A. E., and Ronnestad, I. (2010). A reference growth curve for nutrition experiments in zebrafish (Danio rerio) and changes in whole body proteome during development. Fish Physiol. Biochem. 36, 1199-1215. doi: 10.1007/s10695-010-9400-0.
-
(2010)
Fish Physiol. Biochem
, vol.36
, pp. 1199-1215
-
-
Gomez-Requeni, P.1
Conceicao, L.E.C.2
Olderbakk Jordal, A.E.3
Ronnestad, I.4
-
22
-
-
84870913730
-
Exome sequencing reveals de novo WDR45 mutations causing a phenotypically distinct, X-linked dominant form of NBIA
-
Haack, T. B., Hogarth, P., Kruer, M. C., Gregory, A., Wieland, T., Schwarzmayr, T., et al. (2012). Exome sequencing reveals de novo WDR45 mutations causing a phenotypically distinct, X-linked dominant form of NBIA. Am. J. Hum. Genet. 91, 1144-1149. doi: 10.1016/j.ajhg.2012.10.019.
-
(2012)
Am. J. Hum. Genet
, vol.91
, pp. 1144-1149
-
-
Haack, T.B.1
Hogarth, P.2
Kruer, M.C.3
Gregory, A.4
Wieland, T.5
Schwarzmayr, T.6
-
23
-
-
0032794513
-
Bacterial interactions in early life stages of marine cold water fish
-
Hansen, G. A., and Olafsen, J. A. (1999). Bacterial interactions in early life stages of marine cold water fish. Microb. Ecol. 38, 1-26. doi: 10.1007/s002489900158.
-
(1999)
Microb. Ecol
, vol.38
, pp. 1-26
-
-
Hansen, G.A.1
Olafsen, J.A.2
-
24
-
-
11144293594
-
Ontogeny of the gut motility control system in zebrafish Danio rerio embryos and larvae
-
Holmberg, A., Schwerte, T., Pelster, B., and Holmgren, S. (2004). Ontogeny of the gut motility control system in zebrafish Danio rerio embryos and larvae. J. Exp. Biol. 207, 4085-4094. doi: 10.1242/jeb.01260.
-
(2004)
J. Exp. Biol
, vol.207
, pp. 4085-4094
-
-
Holmberg, A.1
Schwerte, T.2
Pelster, B.3
Holmgren, S.4
-
25
-
-
0036206118
-
Obligate bacterial endosymbionts of Acanthamoeba spp. related to the β-proteobacteria: procabacter acanthamoebae proposal of 'Candidatus' gen. nov. sp. nov
-
Horn, M., Fritsche, T. R., Linner, T., Gautom, R. K., Harzenetter, M. D., and Wagner, M. (2002). Obligate bacterial endosymbionts of Acanthamoeba spp. related to the β-proteobacteria: procabacter acanthamoebae proposal of 'Candidatus' gen. nov. sp. nov. Int. J. Syst. Evol. Microbiol. 52, 599-605. doi: 10.1099/ijs.0.01970-0.
-
(2002)
Int. J. Syst. Evol. Microbiol
, vol.52
, pp. 599-605
-
-
Horn, M.1
Fritsche, T.R.2
Linner, T.3
Gautom, R.K.4
Harzenetter, M.D.5
Wagner, M.6
-
26
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources
-
Huang, D. W., Sherman, B. T., and Lempicki, R. A. (2009a). Systematic and integrative analysis of large gene lists using DAVID Bioinformatics Resources. Nat. Protoc. 4, 44-57. doi: 10.1038/nprot.2008.211.
-
(2009)
Nat. Protoc
, vol.4
, pp. 44-57
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
27
-
-
58549112996
-
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large genes
-
Huang, D. W., Sherman, B. T., and Lempicki, R. A. (2009b). Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large genes. Nucleic Acids Res. 37, 1-13. doi: 10.1093/nar/gkn923.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1-13
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
28
-
-
84874569552
-
Bacterial pathogens and flora isolated from farm-cultured eels (Anguilla japonica) and their environmental waters in Korean eel farms
-
Joh, S. J., Ahn, E. H., Lee, H. J., Shin, G. W., Kwon, J. H., and Park, C. G. (2013). Bacterial pathogens and flora isolated from farm-cultured eels (Anguilla japonica) and their environmental waters in Korean eel farms. Vet. Microbiol. 163, 190-195. doi: 10.1016/j.vetmic.2012.11.004.
-
(2013)
Vet. Microbiol
, vol.163
, pp. 190-195
-
-
Joh, S.J.1
Ahn, E.H.2
Lee, H.J.3
Shin, G.W.4
Kwon, J.H.5
Park, C.G.6
-
30
-
-
9144220759
-
Stanniocalcin-1, an inhibitor of macrophage chemotaxis and chemokinesis
-
Kanellis, J., Bick, R., Garcia, G., Truong, L., Tsao, C. C., Etemadmoghadam, D., et al. (2004). Stanniocalcin-1, an inhibitor of macrophage chemotaxis and chemokinesis. Am. J. Physiol. Renal. Physiol. 286, F356-F362. doi: 10.1152/ajprenal.00138.2003.
-
(2004)
Am. J. Physiol. Renal. Physiol
, vol.286
, pp. F356-F362
-
-
Kanellis, J.1
Bick, R.2
Garcia, G.3
Truong, L.4
Tsao, C.C.5
Etemadmoghadam, D.6
-
31
-
-
77249101479
-
Host-microbe interactions in the developing zebrafish
-
Kanther, M., and Rawls, J. F. (2010). Host-microbe interactions in the developing zebrafish. Curr. Opin. Immunol. 22, 10-19. doi: 10.1016/j.coi.2010.01.006.
-
(2010)
Curr. Opin. Immunol
, vol.22
, pp. 10-19
-
-
Kanther, M.1
Rawls, J.F.2
-
32
-
-
84879316519
-
Comparative digestive physiology
-
Karasov, W. H., and Douglas, A. E. (2013). Comparative digestive physiology. Compr. Physiol. 3, 741-783. doi: 10.1002/cphy.c110054.
-
(2013)
Compr. Physiol
, vol.3
, pp. 741-783
-
-
Karasov, W.H.1
Douglas, A.E.2
-
33
-
-
0029045033
-
Stages of embryonic development of the zebrafish
-
Kimmel, C. B., Ballard, W. W., Kimmel, S. R., Ullmann, B., and Schilling, T. F. (1995). Stages of embryonic development of the zebrafish. Dev. Dyn. 203, 253-310. doi: 10.1002/aja.1002030302.
-
(1995)
Dev. Dyn
, vol.203
, pp. 253-310
-
-
Kimmel, C.B.1
Ballard, W.W.2
Kimmel, S.R.3
Ullmann, B.4
Schilling, T.F.5
-
34
-
-
80052541464
-
Contributions of five secondary metal uptake systems to metal homeostasis of Cupriavidus metallidurans CH34
-
Kirsten, A., Herzberg, M., Voigt, A., Seravalli, A., Grass, G., Scherer, J., et al. (2011). Contributions of five secondary metal uptake systems to metal homeostasis of Cupriavidus metallidurans CH34. J. Bacteriol. 193, 4652-4663. doi: 10.1128/JB.05293-11.
-
(2011)
J. Bacteriol
, vol.193
, pp. 4652-4663
-
-
Kirsten, A.1
Herzberg, M.2
Voigt, A.3
Seravalli, A.4
Grass, G.5
Scherer, J.6
-
35
-
-
84855856997
-
Iron availability increases the pathogenic potential of Salmonella typhimurium and other enteric pathogens at the intestinal epithelial interface
-
Kortman, G. A., Boleij, A., Swinkels, D. W., and Tjalsma, H. (2012). Iron availability increases the pathogenic potential of Salmonella typhimurium and other enteric pathogens at the intestinal epithelial interface. PLoS ONE 7:e29968. doi: 10.1371/journal.pone.0029968.
-
(2012)
PLoS ONE
, vol.7
-
-
Kortman, G.A.1
Boleij, A.2
Swinkels, D.W.3
Tjalsma, H.4
-
36
-
-
84866335245
-
Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capacities
-
Kostka, J. E., Green, S. J., Rishiswar, L., Prakash, O., Katz, L. S., Mariño-Ramirez, L., et al. (2012). Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capacities. J. Bacteriol. 194, 4461-4462. doi: 10.1128/JB.00871-12.
-
(2012)
J. Bacteriol
, vol.194
, pp. 4461-4462
-
-
Kostka, J.E.1
Green, S.J.2
Rishiswar, L.3
Prakash, O.4
Katz, L.S.5
Mariño-Ramirez, L.6
-
38
-
-
84902160813
-
Molecular characterisation of bacterial community structure along the intestinal tract of zebrafish (Danio rerio): a pilot study
-
Lan, C.-C., and Love, D. R. (2012). Molecular characterisation of bacterial community structure along the intestinal tract of zebrafish (Danio rerio): a pilot study. ISRN Microbiol. 2012:590385. doi: 10.5402/2012/590385.
-
(2012)
ISRN Microbiol
, vol.2012
-
-
Lan, C.-C.1
Love, D.R.2
-
39
-
-
0001857117
-
'16S/23S rRNA sequencing'
-
eds E. Stackebrandt and M. Goodfellows (New York, NY: Wiley)
-
Lane, D. J. (1991). "16S/23S rRNA sequencing, "in Nucleic Acid Techniques in Bacterial Systematics, eds E. Stackebrandt and M. Goodfellows (New York, NY: Wiley), 115-175.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
40
-
-
84881270083
-
Commensal clostridia: leading players in the maintenance of gut homeostasis
-
Lopetuso, L. R., Scaldaferri, F., Petito, V., and Gasbarrini, A. (2013). Commensal clostridia: leading players in the maintenance of gut homeostasis. Gut Pathog. 5:23. doi: 10.1186/1757-4749-5-23.
-
(2013)
Gut Pathog
, vol.5
, pp. 23
-
-
Lopetuso, L.R.1
Scaldaferri, F.2
Petito, V.3
Gasbarrini, A.4
-
41
-
-
34548099841
-
Intestinal microbiota variation in Senegalese sole (Solea senegalensis) under different feeding regimes
-
Martin-Antonio, B., Manchado, M., Infante, C., Zerolo, R., Labella, A., Alonso, C., et al. (2007). Intestinal microbiota variation in Senegalese sole (Solea senegalensis) under different feeding regimes. Aquac. Res. 38, 1213-1222. doi: 10.1111/j.1365-2109.2007.01790.x.
-
(2007)
Aquac. Res
, vol.38
, pp. 1213-1222
-
-
Martin-Antonio, B.1
Manchado, M.2
Infante, C.3
Zerolo, R.4
Labella, A.5
Alonso, C.6
-
42
-
-
0035878968
-
Neuroendocrine secretory protein 7B2: structure, expression and functions
-
Mbikay, M., Seidah, N. G., and Chrétien, M. (2001). Neuroendocrine secretory protein 7B2: structure, expression and functions. Biochem. J. 357, 329-342. doi: 10.1042/0264-6021:3570329.
-
(2001)
Biochem. J
, vol.357
, pp. 329-342
-
-
Mbikay, M.1
Seidah, N.G.2
Chrétien, M.3
-
43
-
-
0026052450
-
Trabulsiella guamensis, a new genus and species of the family Enterobacteriaceae that resembles Salmonella subgroups 4 and 5
-
McWhorter, A. C., Haddock, R. L., Nocon, F. A., Steigerwalt, A. G., Brenner, D. J., Aleksic, S., et al. (1991). Trabulsiella guamensis, a new genus and species of the family Enterobacteriaceae that resembles Salmonella subgroups 4 and 5. J. Clin. Microbiol. 29, 1480-1485.
-
(1991)
J. Clin. Microbiol
, vol.29
, pp. 1480-1485
-
-
McWhorter, A.C.1
Haddock, R.L.2
Nocon, F.A.3
Steigerwalt, A.G.4
Brenner, D.J.5
Aleksic, S.6
-
44
-
-
85042619897
-
Molecular analysis of microbiota along the digestive tract of juvenile Atlantic salmon (Salmo salar L.)
-
Navarette, P., Espejo, R. T., and Romero, J. (2009). Molecular analysis of microbiota along the digestive tract of juvenile Atlantic salmon (Salmo salar L.). Microb. Ecol. 57, 550-561. doi: 10.1007/s00248-008-9448-x.
-
(2009)
Microb. Ecol
, vol.57
, pp. 550-561
-
-
Navarette, P.1
Espejo, R.T.2
Romero, J.3
-
45
-
-
77955025936
-
Probiotics and immunity: a fish perspective
-
Nayak, S. K. (2010). Probiotics and immunity: a fish perspective. Fish Shellfish Immunol. 29, 2-14. doi: 10.1016/j.fsi.2010.02.017.
-
(2010)
Fish Shellfish Immunol
, vol.29
, pp. 2-14
-
-
Nayak, S.K.1
-
46
-
-
59849113547
-
Microbes in gastrointestinal health and disease
-
Neish, A. S. (2009). Microbes in gastrointestinal health and disease. Gastroenterology 136, 65-80. doi: 10.1053/j.gastro.2008.10.080.
-
(2009)
Gastroenterology
, vol.136
, pp. 65-80
-
-
Neish, A.S.1
-
47
-
-
80052412795
-
Is Acanthamoeba pathogenecity associated with intracellular bacteria?
-
Paterson, G. N., Rittig, M., Siddiqui, R., and Khan, N. A. (2011). Is Acanthamoeba pathogenecity associated with intracellular bacteria? Exp. Parasitol. 129, 207-210. doi: 10.1016/j.exppara.2011.06.017.
-
(2011)
Exp. Parasitol
, vol.129
, pp. 207-210
-
-
Paterson, G.N.1
Rittig, M.2
Siddiqui, R.3
Khan, N.A.4
-
48
-
-
33645221638
-
Propionibacterium acnes
-
Perry, A. L., and Lambert, P. A. (2006). Propionibacterium acnes. Lett. Appl. Microbiol. 42, 185-188. doi: 10.1111/j.1472-765X.2006.01866.x.
-
(2006)
Lett. Appl. Microbiol
, vol.42
, pp. 185-188
-
-
Perry, A.L.1
Lambert, P.A.2
-
49
-
-
38149046486
-
Prohormone convertases 1/3, 2, furin and protein 7B2 (Secretogranin V) in endocrine cells of the human pancreas
-
Portela-Gomes, G. M., Grimelius, L., and Stridsberg, M. (2008). Prohormone convertases 1/3, 2, furin and protein 7B2 (Secretogranin V) in endocrine cells of the human pancreas. Regul. Pept. 146, 117-124. doi: 10.1016/j.regpep.2007.09.019.
-
(2008)
Regul. Pept
, vol.146
, pp. 117-124
-
-
Portela-Gomes, G.M.1
Grimelius, L.2
Stridsberg, M.3
-
50
-
-
34250633227
-
In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut
-
Rawls, J. F., Mahowald, M. A., Goodman, A. L., Trent, C. M., and Gordon, J. I. (2007). In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut. Proc. Natl. Acad. Sci. U.S.A. 104, 7622-7627. doi: 10.1073/pnas.0702386104.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A
, vol.104
, pp. 7622-7627
-
-
Rawls, J.F.1
Mahowald, M.A.2
Goodman, A.L.3
Trent, C.M.4
Gordon, J.I.5
-
51
-
-
33749997498
-
Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
-
Rawls, J. F., Mahowald, M. A., Ley, R. E., and Gordon, J. I. (2006). Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 127, 423-433. doi: 10.1016/j.cell.2006.08.043.
-
(2006)
Cell
, vol.127
, pp. 423-433
-
-
Rawls, J.F.1
Mahowald, M.A.2
Ley, R.E.3
Gordon, J.I.4
-
52
-
-
1842532897
-
Gnotobiotic zebrafish reveal evolutionarily conserved responses to gut microbiota
-
Rawls, J. F., Samuel, B. S., and Gordon, J. I. (2004). Gnotobiotic zebrafish reveal evolutionarily conserved responses to gut microbiota. Proc. Natl. Acad. Sci. U.S.A. 101, 4596-4601. doi: 10.1073/pnas.0400706101.
-
(2004)
Proc. Natl. Acad. Sci. U.S.A
, vol.101
, pp. 4596-4601
-
-
Rawls, J.F.1
Samuel, B.S.2
Gordon, J.I.3
-
53
-
-
84914103639
-
The zebrafish (Danio rerio) as a model organism, with emphasis on applications for finfish aquaculture research
-
Ribas, L., and Piferrer, F. (2013). The zebrafish (Danio rerio) as a model organism, with emphasis on applications for finfish aquaculture research. Rev. Aquacult. 5, 1-32. doi: 10.1111/raq.12041.
-
(2013)
Rev. Aquacult
, vol.5
, pp. 1-32
-
-
Ribas, L.1
Piferrer, F.2
-
54
-
-
77949488663
-
Prebiotics in aquaculture: a review
-
Ringø, E., Olsen, R. E., Gifstad, T. Ø., Dalmo, R. A., Amlund, H., Hemre, G.-I., et al. (2010). Prebiotics in aquaculture: a review. Aquacult. Nutr. 16, 117-136. doi: 10.1111/j.1365-2095.2009.00731.x.
-
(2010)
Aquacult. Nutr
, vol.16
, pp. 117-136
-
-
Ringø, E.1
Olsen, R.E.2
Gifstad, T.Ø.3
Dalmo, R.A.4
Amlund, H.5
Hemre, G.-I.6
-
55
-
-
80052970180
-
Evidence for a core gut microbiota in the zebrafish
-
Roeselers, G., Mittge, E. K., Stephens, W. Z., Parichy, D. M., Cavanaugh, C. M., Guillemin, K., et al. (2011). Evidence for a core gut microbiota in the zebrafish. ISME J. 5, 1595-1608. doi: 10.1038/ismej.2011.38.
-
(2011)
ISME J
, vol.5
, pp. 1595-1608
-
-
Roeselers, G.1
Mittge, E.K.2
Stephens, W.Z.3
Parichy, D.M.4
Cavanaugh, C.M.5
Guillemin, K.6
-
56
-
-
84976514974
-
Draft genome of the marine Gammaproteobacterium Halomonas titanicae
-
Sánchez-Porro, C., De la Haba, R. R., Cruz-Hernandez, N., Gonzalez, J. M., Reyes-Guirao, C., Navarro-Sampedro, L., et al. (2013). Draft genome of the marine Gammaproteobacterium Halomonas titanicae. Genome Announc. 1, e00083-e00013. doi: 10.1128/genomeA.00083-13.
-
(2013)
Genome Announc
, vol.1
-
-
Sánchez-Porro, C.1
De la Haba, R.R.2
Cruz-Hernandez, N.3
Gonzalez, J.M.4
Reyes-Guirao, C.5
Navarro-Sampedro, L.6
-
57
-
-
84866404780
-
Microbiota regulate intestinal absorbtion and metabolism of fatty acids in the zebrafish
-
Semanova, I., Carten, J. D., Stombaugh, J., Mackey, L. C., Knight, R., Farber, S. A., et al. (2012). Microbiota regulate intestinal absorbtion and metabolism of fatty acids in the zebrafish. Cell Host Microbe 12, 277-288. doi: 10.1016/j.chom.2012.08.003.
-
(2012)
Cell Host Microbe
, vol.12
, pp. 277-288
-
-
Semanova, I.1
Carten, J.D.2
Stombaugh, J.3
Mackey, L.C.4
Knight, R.5
Farber, S.A.6
-
58
-
-
0037317147
-
Ferric citrate is half as effective as ferrous sulfate in meeting the iron requirement of juvenile Tilapia, Oreochromis niloticus × O. aureus
-
Shiau, S.-Y., and Su, L.-W. (2003). Ferric citrate is half as effective as ferrous sulfate in meeting the iron requirement of juvenile Tilapia, Oreochromis niloticus × O. aureus. J. Nutr. 133, 483-488.
-
(2003)
J. Nutr
, vol.133
, pp. 483-488
-
-
Shiau, S.-Y.1
Su, L.-W.2
-
59
-
-
84862770956
-
Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis
-
Sullam, K. E., Essinger, S. D., Lozupone, C. A., O'Connor, M. P., Rosen, G. L., Knight, R., et al. (2012). Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis. Mol. Ecol. 21, 3363-3378. doi: 10.1111/j.1365-294X.2012.05552.x.
-
(2012)
Mol. Ecol
, vol.21
, pp. 3363-3378
-
-
Sullam, K.E.1
Essinger, S.D.2
Lozupone, C.A.3
O'Connor, M.P.4
Rosen, G.L.5
Knight, R.6
-
60
-
-
77956878538
-
Intestinal microbiota diversity of the flat fish Solea senegalensis (Kaup, 1858) following probiotic administration
-
Tapia-Paniagua, S. T., Chabrillón, M., Díaz-Rosales, P., García de la Banda, I., Lobo, C., Balebona, M. C., et al. (2010). Intestinal microbiota diversity of the flat fish Solea senegalensis (Kaup, 1858) following probiotic administration. Microb. Ecol. 60, 310-319. doi: 10.1007/s00248-010-9680-z.
-
(2010)
Microb. Ecol
, vol.60
, pp. 310-319
-
-
Tapia-Paniagua, S.T.1
Chabrillón, M.2
Díaz-Rosales, P.3
García de la Banda, I.4
Lobo, C.5
Balebona, M.C.6
-
61
-
-
84925522956
-
The main Aeromonas pathogenic factors
-
Tomás, J. M. (2012). The main Aeromonas pathogenic factors. ISRN Microbiol. 2012:25621. doi: 10.5402/2012/256261.
-
(2012)
ISRN Microbiol
, vol.2012
, pp. 25621
-
-
Tomás, J.M.1
-
62
-
-
64149129834
-
Effects of stanniocalcin 1 on calcium uptake in zebrafish (Danio rerio) embryo
-
Tseng, D.-Y., Chou, M.-Y., Tseng, Y.-C., Hsiao, C.-D., Huang, C.-J., Kaneko, T., et al. (2009). Effects of stanniocalcin 1 on calcium uptake in zebrafish (Danio rerio) embryo. Am. J. Physiol. Regul. Integr. Comp. Physiol. 296, R549-R557. doi: 10.1152/ajpregu.90742.2008.
-
(2009)
Am. J. Physiol. Regul. Integr. Comp. Physiol
, vol.296
, pp. R549-R557
-
-
Tseng, D.-Y.1
Chou, M.-Y.2
Tseng, Y.-C.3
Hsiao, C.-D.4
Huang, C.-J.5
Kaneko, T.6
-
63
-
-
81255149542
-
Zebrafish as a model organism for nutrition and growth: towards comparative studies of nutritional genomics applied to aquacultured fishes
-
Ulloa, P. E., Iturra, P., Neira, R., and Araneda, C. (2011). Zebrafish as a model organism for nutrition and growth: towards comparative studies of nutritional genomics applied to aquacultured fishes. Rev. Fish Biol. Fish. 21, 649-666. doi: 10.1007/s11160-011-9203-0.
-
(2011)
Rev. Fish Biol. Fish
, vol.21
, pp. 649-666
-
-
Ulloa, P.E.1
Iturra, P.2
Neira, R.3
Araneda, C.4
-
64
-
-
0034444503
-
Probiotic bacteria as biological control agents in aquaculture
-
Verschuere, L., Rombaut, G., Sorgeloos, P., and Verstraete, W. (2000). Probiotic bacteria as biological control agents in aquaculture. Microbiol. Mol. Biol. Rev. 64, 655-671. doi: 10.1128/MMBR.64.4.655-671.2000.
-
(2000)
Microbiol. Mol. Biol. Rev
, vol.64
, pp. 655-671
-
-
Verschuere, L.1
Rombaut, G.2
Sorgeloos, P.3
Verstraete, W.4
-
65
-
-
12344287191
-
Intestinal growth and differentiation in zebrafish
-
Wallace, K. N., Akhter, S., Smith, E. M., Lorent, K., and Pack, M. (2005). Intestinal growth and differentiation in zebrafish. Mech. Dev. 1222, 157-173. doi: 10.1016/j.mod.2004.10.009.
-
(2005)
Mech. Dev
, vol.1222
, pp. 157-173
-
-
Wallace, K.N.1
Akhter, S.2
Smith, E.M.3
Lorent, K.4
Pack, M.5
-
66
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang, Q., Garrity, G. M., Tiedje, J. M., and Cole, J. R. (2007). Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73, 5261-5267. doi: 10.1128/AEM.00062-07.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
67
-
-
0030835589
-
Trace minerals in fish nutrition
-
Watanabe, T., Kiron, V., and Satoh, S. (1997). Trace minerals in fish nutrition. Aquaculture 151, 185-207. doi: 10.1016/S0044-8486(96)01503-7.
-
(1997)
Aquaculture
, vol.151
, pp. 185-207
-
-
Watanabe, T.1
Kiron, V.2
Satoh, S.3
|