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Volumn 4, Issue MAY, 2015, Pages

SMC condensin entraps chromosomal DNA by an ATP hydrolysis dependent loading mechanism in Bacillus subtilis

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; CONDENSIN; DNA FRAGMENT; FLAGELLIN; GENOMIC DNA; ADENOSINE TRIPHOSPHATASE; BACTERIAL DNA; BACTERIAL PROTEIN; CELL CYCLE PROTEIN; DNA BINDING PROTEIN; MULTIPROTEIN COMPLEX; SMC PROTEIN, BACTERIA;

EID: 84930616986     PISSN: None     EISSN: 2050084X     Source Type: Journal    
DOI: 10.7554/eLife.06659     Document Type: Article
Times cited : (122)

References (52)
  • 1
    • 84871208196 scopus 로고    scopus 로고
    • Self-organization of domain structures by DNA-loop-extruding enzymes
    • Alipour E, Marko JF. 2012. Self-organization of domain structures by DNA-loop-extruding enzymes. Nucleic Acids Research 40:11202-11212. doi: 10.1093/nar/gks925.
    • (2012) Nucleic Acids Research , vol.40 , pp. 11202-11212
    • Alipour, E.1    Marko, J.F.2
  • 3
    • 84875789991 scopus 로고    scopus 로고
    • Reversible maleimide-thiol adducts yield glutathione-sensitive poly(ethylene glycol)- heparin hydrogels
    • Baldwin AD, Kiick KL. 2013. Reversible maleimide-thiol adducts yield glutathione-sensitive poly(ethylene glycol)- heparin hydrogels. Polymer Chemistry 4:133-143. doi: 10.1039/C2PY20576A.
    • (2013) Polymer Chemistry , vol.4 , pp. 133-143
    • Baldwin, A.D.1    Kiick, K.L.2
  • 4
    • 34247497733 scopus 로고    scopus 로고
    • Whole-genome analysis of the chromosome partitioning and sporulation protein Spo0J (ParB) reveals spreading and origin-distal sites on the Bacillus subtilis chromosome
    • Breier AM, Grossman AD. 2007. Whole-genome analysis of the chromosome partitioning and sporulation protein Spo0J (ParB) reveals spreading and origin-distal sites on the Bacillus subtilis chromosome. Molecular Microbiology 64:703-718. doi: 10.1111/j.1365-2958.2007.05690.x.
    • (2007) Molecular Microbiology , vol.64 , pp. 703-718
    • Breier, A.M.1    Grossman, A.D.2
  • 7
    • 2942707858 scopus 로고    scopus 로고
    • DNA interaction and dimerization of eukaryotic SMC hinge domains
    • Chiu A, Revenkova E, Jessberger R. 2004. DNA interaction and dimerization of eukaryotic SMC hinge domains. The Journal of Biological Chemistry 279:26233-26242. doi: 10.1074/jbc.M402439200.
    • (2004) The Journal of Biological Chemistry , vol.279 , pp. 26233-26242
    • Chiu, A.1    Revenkova, E.2    Jessberger, R.3
  • 8
    • 0346121425 scopus 로고    scopus 로고
    • Condensin-dependent localisation of topoisomerase II to an axial chromosomal structure is required for sister chromatid resolution during mitosis
    • Coelho PA, Queiroz-Machado J, Sunkel CE. 2003. Condensin-dependent localisation of topoisomerase II to an axial chromosomal structure is required for sister chromatid resolution during mitosis. Journal of Cell Science 116:4763-4776. doi: 10.1242/jcs.00799.
    • (2003) Journal of Cell Science , vol.116 , pp. 4763-4776
    • Coelho, P.A.1    Queiroz-Machado, J.2    Sunkel, C.E.3
  • 10
    • 79961029402 scopus 로고    scopus 로고
    • Condensin structures chromosomal DNA through topological links
    • Cuylen S, Metz J, Haering CH. 2011. Condensin structures chromosomal DNA through topological links. Nature Structural & Molecular Biology 18:894-901. doi: 10.1038/nsmb.2087.
    • (2011) Nature Structural & Molecular Biology , vol.18 , pp. 894-901
    • Cuylen, S.1    Metz, J.2    Haering, C.H.3
  • 11
    • 84857334794 scopus 로고    scopus 로고
    • Using DNA as a fiducial marker to study SMC complex interactions with the atomic force microscope
    • Fuentes-Perez ME, Gwynn EJ, Dillingham MS, Moreno-Herrero F. 2012. Using DNA as a fiducial marker to study SMC complex interactions with the atomic force microscope. Biophysical Journal 102:839-848. doi: 10.1016/j. bpj.2012.01.022.
    • (2012) Biophysical Journal , vol.102 , pp. 839-848
    • Fuentes-Perez, M.E.1    Gwynn, E.J.2    Dillingham, M.S.3    Moreno-Herrero, F.4
  • 12
    • 32944477078 scopus 로고    scopus 로고
    • Condensin I stabilizes chromosomes mechanically through a dynamic interaction in live cells
    • Gerlich D, Hirota T, Koch B, Peters J-M, Ellenberg J. 2006. Condensin I stabilizes chromosomes mechanically through a dynamic interaction in live cells. Current Biology 16:333-344. doi: 10.1016/j.cub.2005.12.040.
    • (2006) Current Biology , vol.16 , pp. 333-344
    • Gerlich, D.1    Hirota, T.2    Koch, B.3    Peters, J.M.4    Ellenberg, J.5
  • 14
    • 77449152577 scopus 로고    scopus 로고
    • Yeast cohesin complex embraces 2 micron plasmid sisters in a trilinked catenane complex
    • Ghosh SK, Huang CC, Hajra S, Jayaram M. 2009. Yeast cohesin complex embraces 2 micron plasmid sisters in a trilinked catenane complex. Nucleic Acids Research 38:570-584. doi: 10.1093/nar/gkp993.
    • (2009) Nucleic Acids Research , vol.38 , pp. 570-584
    • Ghosh, S.K.1    Huang, C.C.2    Hajra, S.3    Jayaram, M.4
  • 17
    • 80051564820 scopus 로고    scopus 로고
    • MukBEF on the march: Taking over chromosome organization in bacteria?
    • Gruber S. 2011. MukBEF on the march: taking over chromosome organization in bacteria? Molecular Microbiology 81:855-859. doi: 10.1111/j.1365-2958.2011.07764.x.
    • (2011) Molecular Microbiology , vol.81 , pp. 855-859
    • Gruber, S.1
  • 18
    • 84910095543 scopus 로고    scopus 로고
    • Multilayer chromosome organization through DNA bending, bridging and extrusion
    • Gruber S. 2014. Multilayer chromosome organization through DNA bending, bridging and extrusion. Current Opinion in Microbiology 22:102-110. doi: 10.1016/j.mib.2014.09.018.
    • (2014) Current Opinion in Microbiology , vol.22 , pp. 102-110
    • Gruber, S.1
  • 19
    • 65549135760 scopus 로고    scopus 로고
    • Recruitment of condensin to replication origin regions by ParB/SpoOJ promotes chromosome segregation in B
    • Gruber S, Errington J. 2009. Recruitment of condensin to replication origin regions by ParB/SpoOJ promotes chromosome segregation in B. subtilis. Cell 137:685-696. doi: 10.1016/j.cell.2009.02.035.
    • (2009) subtilis. Cell , vol.137 , pp. 685-696
    • Gruber, S.1    Errington, J.2
  • 20
    • 0037459376 scopus 로고    scopus 로고
    • Chromosomal cohesin forms a ring
    • Gruber S, Haering CH, Nasmyth K. 2003. Chromosomal cohesin forms a ring. Cell 112:765-777. doi: 10.1016/ S0092-8674(03)00162-4.
    • (2003) Cell , vol.112 , pp. 765-777
    • Gruber, S.1    Haering, C.H.2    Nasmyth, K.3
  • 21
    • 33750021276 scopus 로고    scopus 로고
    • Evidence that loading of cohesin onto chromosomes involves opening of its SMC hinge
    • Gruber S, Arumugam P, Katou Y, Kuglitsch D, Helmhart W, Shirahige K, Nasmyth K. 2006. Evidence that loading of cohesin onto chromosomes involves opening of its SMC hinge. Cell 127:523-537. doi: 10.1016/j.cell.2006.08.048.
    • (2006) Cell , vol.127 , pp. 523-537
    • Gruber, S.1    Arumugam, P.2    Katou, Y.3    Kuglitsch, D.4    Helmhart, W.5    Shirahige, K.6    Nasmyth, K.7
  • 22
    • 84895070168 scopus 로고    scopus 로고
    • Interlinked sister chromosomes arise in the absence of condensin during fast replication in B
    • Gruber S, Veening J-W, Bach J, Blettinger M, Bramkamp M, Errington J. 2014. Interlinked sister chromosomes arise in the absence of condensin during fast replication in B. subtilis. Current Biology 24:293-298. doi: 10.1016/j. cub.2013.12.049.
    • (2014) subtilis. Current Biology , vol.24 , pp. 293-298
    • Gruber, S.1    Veening, J.W.2    Bach, J.3    Blettinger, M.4    Bramkamp, M.5    Errington, J.6
  • 23
    • 47549115780 scopus 로고    scopus 로고
    • The cohesin ring concatenates sister DNA molecules
    • Haering CH, Farcas A-M, Arumugam P, Metson J, Nasmyth K. 2008. The cohesin ring concatenates sister DNA molecules. Nature 454:297-301. doi: 10.1038/nature07098.
    • (2008) Nature , vol.454 , pp. 297-301
    • Haering, C.H.1    Farcas, A.M.2    Arumugam, P.3    Metson, J.4    Nasmyth, K.5
  • 24
    • 0037115816 scopus 로고    scopus 로고
    • Improving the predictive value of the competence transcription factor (ComK) binding site in Bacillus subtilis using a genomic approach
    • Hamoen LW, Smits WK, de Jong A, Holsappel S, Kuipers OP. 2002. Improving the predictive value of the competence transcription factor (ComK) binding site in Bacillus subtilis using a genomic approach. Nucleic Acids Research 30:5517-5528. doi: 10.1093/nar/gkf698.
    • (2002) Nucleic Acids Research , vol.30 , pp. 5517-5528
    • Hamoen, L.W.1    Smits, W.K.2    de Jong, A.3    Holsappel, S.4    Kuipers, O.P.5
  • 25
    • 33646177549 scopus 로고    scopus 로고
    • At the heart of the chromosome: SMC proteins in action
    • Hirano T. 2006. At the heart of the chromosome: SMC proteins in action. Nature Reviews. Molecular Cell Biology 7: 311-322. doi: 10.1038/nrm1909.
    • (2006) Nature Reviews. Molecular Cell Biology , vol.7 , pp. 311-322
    • Hirano, T.1
  • 26
    • 0035875918 scopus 로고    scopus 로고
    • Bimodal Activation of SMC ATPase by intra- and intermolecular interactions
    • Hirano M, Anderson DE, Erickson HP, Hirano T. 2001. Bimodal Activation of SMC ATPase by intra- and intermolecular interactions. The EMBO Journal 20:3238-3250. doi: 10.1093/emboj/20.12.3238.
    • (2001) The EMBO Journal , vol.20 , pp. 3238-3250
    • Hirano, M.1    Anderson, D.E.2    Erickson, H.P.3    Hirano, T.4
  • 27
    • 3343008805 scopus 로고    scopus 로고
    • Positive and negative regulation of SMC-DNA interactions by ATP and accessory proteins
    • Hirano M, Hirano T. 2004. Positive and negative regulation of SMC-DNA interactions by ATP and accessory proteins. The EMBO Journal 23:2664-2673. doi: 10.1038/sj.emboj.7600264.
    • (2004) The EMBO Journal , vol.23 , pp. 2664-2673
    • Hirano, M.1    Hirano, T.2
  • 28
    • 30744441604 scopus 로고    scopus 로고
    • Opening closed arms: Long-distance activation of SMC ATPase by hinge-DNA interactions
    • Hirano M, Hirano T. 2006. Opening closed arms: long-distance activation of SMC ATPase by hinge-DNA interactions. Molecular Cell 21:175-186. doi: 10.1016/j.molcel.2005.11.026.
    • (2006) Molecular Cell , vol.21 , pp. 175-186
    • Hirano, M.1    Hirano, T.2
  • 29
    • 0027943721 scopus 로고
    • A heterodimeric coiled-coil protein required for mitotic chromosome condensation in vitro
    • Hirano T, Mitchison TJ. 1994. A heterodimeric coiled-coil protein required for mitotic chromosome condensation in vitro. Cell 79:449-458. doi: 10.1016/0092-8674(94)90254-2.
    • (1994) Cell , vol.79 , pp. 449-458
    • Hirano, T.1    Mitchison, T.J.2
  • 31
    • 25144434235 scopus 로고    scopus 로고
    • A topological interaction between cohesin rings and a circular minichromosome
    • Ivanov D, Nasmyth K. 2005. A topological interaction between cohesin rings and a circular minichromosome. Cell 122:849-860. doi: 10.1016/j.cell.2005.07.018.
    • (2005) Cell , vol.122 , pp. 849-860
    • Ivanov, D.1    Nasmyth, K.2
  • 32
    • 35148873679 scopus 로고    scopus 로고
    • Catalysis of imido group hydrolysis in a maleimide conjugate
    • Kalia J, Raines RT. 2007. Catalysis of imido group hydrolysis in a maleimide conjugate. Bioorganic & Medicinal Chemistry Letters 17:6286-6289. doi: 10.1016/j.bmcl.2007.09.002.
    • (2007) Bioorganic & Medicinal Chemistry Letters , vol.17 , pp. 6286-6289
    • Kalia, J.1    Raines, R.T.2
  • 33
    • 84875891383 scopus 로고    scopus 로고
    • Molecular basis of SMC ATPase activation: Role of internal structural changes of the regulatory subcomplex ScpAB
    • Kamada K, Miyata M, Hirano T. 2013. Molecular basis of SMC ATPase activation: role of internal structural changes of the regulatory subcomplex ScpAB. Structure 21:581-594. doi: 10.1016/j.str.2013.02.016.
    • (2013) Structure , vol.21 , pp. 581-594
    • Kamada, K.1    Miyata, M.2    Hirano, T.3
  • 34
    • 84878574585 scopus 로고    scopus 로고
    • The bacterial SMC complex displays two distinct modes of interaction with the chromosome
    • Kleine Borgmann LA, Ries J, Ewers H, Ulbrich MH, Graumann PL. 2013. The bacterial SMC complex displays two distinct modes of interaction with the chromosome. Cell Reports 3:1483-1492. doi: 10.1016/j.celrep.2013. 04.005.
    • (2013) Cell Reports , vol.3 , pp. 1483-1492
    • Kleine Borgmann, L.A.1    Ries, J.2    Ewers, H.3    Ulbrich, M.H.4    Graumann, P.L.5
  • 35
    • 84873060429 scopus 로고    scopus 로고
    • DnaN clamp zones provide a platform for spatiotemporal coupling of mismatch detection to DNA replication
    • Lenhart JS, Sharma A, Hingorani MM, Simmons LA. 2013. DnaN clamp zones provide a platform for spatiotemporal coupling of mismatch detection to DNA replication. Molecular Microbiology 87:553-568. doi: 10. 1111/mmi.12115.
    • (2013) Molecular Microbiology , vol.87 , pp. 553-568
    • Lenhart, J.S.1    Sharma, A.2    Hingorani, M.M.3    Simmons, L.A.4
  • 36
    • 3242882269 scopus 로고    scopus 로고
    • Structural analysis of the chromosome segregation protein Spo0J from Thermus thermophilus
    • Leonard TA, Butler PJ, Löwe J. 2004. Structural analysis of the chromosome segregation protein Spo0J from Thermus thermophilus. Molecular Microbiology 53:419-432. doi: 10.1111/j.1365-2958.2004.04133.x.
    • (2004) Molecular Microbiology , vol.53 , pp. 419-432
    • Leonard, T.A.1    Butler, P.J.2    Löwe, J.3
  • 37
    • 0035916338 scopus 로고    scopus 로고
    • Intermolecular DNA interactions stimulated by the cohesin complex in vitro: Implications for sister chromatid cohesion
    • Losada A, Hirano T. 2001. Intermolecular DNA interactions stimulated by the cohesin complex in vitro: implications for sister chromatid cohesion. Current Biology 11:268-272. doi: 10.1016/S0960-9822(01)00066-5.
    • (2001) Current Biology , vol.11 , pp. 268-272
    • Losada, A.1    Hirano, T.2
  • 38
    • 0037387829 scopus 로고    scopus 로고
    • A two-step scaffolding model for mitotic chromosome assembly
    • Maeshima K, Laemmli UK. 2003. A two-step scaffolding model for mitotic chromosome assembly. Developmental Cell 4:467-480. doi: 10.1016/S1534-5807(03)00092-3.
    • (2003) Developmental Cell , vol.4 , pp. 467-480
    • Maeshima, K.1    Laemmli, U.K.2
  • 40
    • 79960708973 scopus 로고    scopus 로고
    • SMC is recruited to oriC by ParB and promotes chromosome segregation in Streptococcus pneumoniae
    • Minnen A, Attaiech L, Thon M, Gruber S, Veening JW. 2011. SMC is recruited to oriC by ParB and promotes chromosome segregation in Streptococcus pneumoniae. Molecular Microbiology 81:676-688. doi: 10.1111/j. 1365-2958.2011.07722.x.
    • (2011) Molecular Microbiology , vol.81 , pp. 676-688
    • Minnen, A.1    Attaiech, L.2    Thon, M.3    Gruber, S.4    Veening, J.W.5
  • 41
    • 0035678054 scopus 로고    scopus 로고
    • Disseminating the genome: Joining, resolving, and separating sister chromatids during mitosis and meiosis
    • Nasmyth K. 2001. Disseminating the genome: joining, resolving, and separating sister chromatids during mitosis and meiosis. Annual Review of Genetics 35:673-745. doi: 10.1146/annurev.genet.35.102401.091334.
    • (2001) Annual Review of Genetics , vol.35 , pp. 673-745
    • Nasmyth, K.1
  • 42
    • 0141987890 scopus 로고    scopus 로고
    • Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells
    • Ono T, Losada A, Hirano M, Myers MP, Neuwald AF, Hirano T. 2003. Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells. Cell 115:109-121. doi: 10.1016/S0092-8674 (03)00724-4.
    • (2003) Cell , vol.115 , pp. 109-121
    • Ono, T.1    Losada, A.2    Hirano, M.3    Myers, M.P.4    Neuwald, A.F.5    Hirano, T.6
  • 43
    • 3042809666 scopus 로고    scopus 로고
    • Spatial and temporal regulation of Condensins I and II in mitotic chromosome assembly in human cells
    • Ono T, Fang Y, Spector DL, Hirano T. 2004. Spatial and temporal regulation of Condensins I and II in mitotic chromosome assembly in human cells. Molecular Biology of the Cell 15:3296-3308. doi: 10.1091/mbc.E04-03-0242.
    • (2004) Molecular Biology of the Cell , vol.15 , pp. 3296-3308
    • Ono, T.1    Fang, Y.2    Spector, D.L.3    Hirano, T.4
  • 44
    • 0033593587 scopus 로고    scopus 로고
    • Silencing of genes flanking the P1 plasmid centromere
    • Rodionov O, Lobocka M, Yarmolinsky M. 1999. Silencing of genes flanking the P1 plasmid centromere. Science 283:546-549. doi: 10.1126/science.283.5401.546.
    • (1999) Science , vol.283 , pp. 546-549
    • Rodionov, O.1    Lobocka, M.2    Yarmolinsky, M.3
  • 46
    • 79952682341 scopus 로고    scopus 로고
    • The replicase sliding clamp dynamically accumulates behind progressing replication forks in Bacillus subtilis cells
    • Su'etsugu M, Errington J. 2011. The replicase sliding clamp dynamically accumulates behind progressing replication forks in Bacillus subtilis cells. Molecular Cell 41:720-732. doi: 10.1016/j.molcel.2011.02.024.
    • (2011) Molecular Cell , vol.41 , pp. 720-732
    • Su'etsugu, M.1    Errington, J.2
  • 47
    • 65549149524 scopus 로고    scopus 로고
    • Recruitment of SMC by ParB-parS organizes the origin region and promotes efficient chromosome segregation
    • Sullivan NL, Marquis KA, Rudner DZ. 2009. Recruitment of SMC by ParB-parS organizes the origin region and promotes efficient chromosome segregation. Cell 137:697-707. doi: 10.1016/j.cell.2009.04.044.
    • (2009) Cell , vol.137 , pp. 697-707
    • Sullivan, N.L.1    Marquis, K.A.2    Rudner, D.Z.3
  • 48
    • 0030826133 scopus 로고    scopus 로고
    • DNA renaturation activity of the SMC complex implicated in chromosome condensation
    • Sutani T, Yanagida M. 1997. DNA renaturation activity of the SMC complex implicated in chromosome condensation. Nature 388:798-801. doi: 10.1038/42062.
    • (1997) Nature , vol.388 , pp. 798-801
    • Sutani, T.1    Yanagida, M.2
  • 49
    • 84870491262 scopus 로고    scopus 로고
    • Condensin, chromatin crossbarring and chromosome condensation
    • Thadani R, Uhlmann F, Heeger S. 2012. Condensin, chromatin crossbarring and chromosome condensation. Current Biology 22:R1012-R1021. doi: 10.1016/j.cub.2012.10.023.
    • (2012) Current Biology , vol.22 , pp. R1012-R1021
    • Thadani, R.1    Uhlmann, F.2    Heeger, S.3
  • 50
    • 84895067831 scopus 로고    scopus 로고
    • The SMC condensin complex is required for origin segregation in Bacillus subtilis
    • Wang X, Tang OW, Riley EP, Rudner DZ. 2014. The SMC condensin complex is required for origin segregation in Bacillus subtilis. Current Biology 24:287-292. doi: 10.1016/j.cub.2013.11.050.
    • (2014) Current Biology , vol.24 , pp. 287-292
    • Wang, X.1    Tang, O.W.2    Riley, E.P.3    Rudner, D.Z.4
  • 51
    • 0242540364 scopus 로고    scopus 로고
    • A model for ATP hydrolysis-dependent binding of cohesin to DNA
    • Weitzer S, Lehane C, Uhlmann F. 2003. A model for ATP hydrolysis-dependent binding of cohesin to DNA. Current Biology 13:1930-1940. doi: 10.1016/j.cub.2003.10.030.
    • (2003) Current Biology , vol.13 , pp. 1930-1940
    • Weitzer, S.1    Lehane, C.2    Uhlmann, F.3
  • 52
    • 27644482283 scopus 로고    scopus 로고
    • Comprehensive algorithm for quantitative real-time polymerase chain reaction
    • Zhao S, Fernald RD. 2005. Comprehensive algorithm for quantitative real-time polymerase chain reaction. Journal of Computational Biology 12:1047-1064. doi: 10.1089/cmb.2005.12.1047.
    • (2005) Journal of Computational Biology , vol.12 , pp. 1047-1064
    • Zhao, S.1    Fernald, R.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.