Is this the right normalization? A diagnostic tool for ChIP-seq normalization

BMC Bioinformatics

Volumn 16, Issue 1, 2015, Pages

  Angelini, Claudia ^a   Heller, Ruth ^b   Volkinshtein, Rita ^b   Yekutieli, Daniel ^b  

^a Istituto per le Applicazioni del Calcolo Mauro Picone   (Italy)

^b TEL AVIV UNIVERSITY   (Israel)

Author keywords

Chip Seq; Diagnostic plots; Normalization

Indexed keywords

BINDING SITES; BINS; DIAGNOSTIC PRODUCTS; NUCLEIC ACIDS; RISK ASSESSMENT;

CHIP-SEQ; DIAGNOSTIC PLOTS; GENOME-WIDE PROFILING; LOGARITHMIC TRANSFORMATIONS; NORMALIZATION; NORMALIZATION CONSTANTS; PROTEIN-DNA INTERACTIONS; TRANSCRIPTION FACTOR BINDING SITES;

RISK PERCEPTION;

HISTONE; RNA POLYMERASE II; SACCHAROMYCES CEREVISIAE PROTEIN; TRANSCRIPTION FACTOR;

ALGORITHM; BINDING SITE; CHROMATIN IMMUNOPRECIPITATION; DNA SEQUENCE; FUNGAL GENOME; GENETICS; HIGH THROUGHPUT SEQUENCING; METABOLISM; PROCEDURES; SACCHAROMYCES CEREVISIAE; STATISTICAL ANALYSIS;

ALGORITHMS; BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; DATA INTERPRETATION, STATISTICAL; GENOME, FUNGAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HISTONES; RNA POLYMERASE II; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS;

EID: 84930507381     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/s12859-015-0579-z     Document Type: Article

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