Diversity of endophytic fungal community associated with Piper hispidum (Piperaceae) leaves

Genetics and Molecular Research

Volumn 11, Issue 2, 2012, Pages 1575-1585

  Orlandelli, R C ^a   Alberto, R N ^a   Rubin Filho, C J ^a   Pamphile, J A ^a  

^a STATE UNIVERSITY OF MARINGÁ   (Brazil)

Author keywords

Endophytes; Molecular identification; Phylogeny; Piperaceae; rDNA sequencing

Indexed keywords

INTERNAL TRANSCRIBED SPACER 1; INTERNAL TRANSCRIBED SPACER 2; RIBOSOME DNA;

ALTERNARIA; ARTICLE; COLLETOTRICHUM; CONTROLLED STUDY; DIAPORTHALES; DNA SEQUENCE; DRECHSLERA; ENDOPHYTE; FUNGAL COLONIZATION; FUNGAL COMMUNITY; FUNGAL GENETICS; FUNGUS; FUNGUS GROWTH; FUNGUS IDENTIFICATION; FUNGUS ISOLATION; GLOEOSPORIODES; GLOMERELLA; GLOMERELLA CINGULATA; GUIGNARDIA; LASIODIPLODIA; MARASMIUS; MICROBIAL DIVERSITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHLEBIA; PHOMA; PHOMOPSIS; PHYLOGENY; PIPER HISPIDUM; PIPERACEAE; PLANT LEAF; SCHIZOPHYLLUM; SPECIES DIFFERENCE; UNINDEXED SEQUENCE;

EID: 84930483114     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2012.May.22.7     Document Type: Article

References (40)

1. Albrectsen BR, Björkén L, Varad A and Hagner A (2010). Endophytic fungi in European aspen (Populus tremula) leaves-diversity, detection, and a suggested correlation with herbivory resistance. Fungal Divers. 41: 17-28.
2. Araújo WL, Maccheroni W Jr, Aguilar-Vildoso CI, Barroso PA, et al. (2001). Variability and interactions between endophytic bacteria and fungi isolated from leaf tissues of citrus rootstocks. Can. J. Microbiol. 47: 229-236.
3. Aravind R, Kumar A, Eapen SJ and Ramana KV (2009). Endophytic bacterial flora in root and stem tissues of black pepper (Piper nigrum L.) genotype: isolation, identification and evaluation against Phytophthora capsici. Lett. Appl. Microbiol. 48: 58-64.
4. Arnold AE (2002). Neotropical Fungal Endophytes: Diversity and Ecology. Doctoral thesis, University of Arizona, Tucson.
5. Arnold AE (2008). Endophytic Fungi: Hidden Components of Tropical Community Ecology. In: Tropical Forest Community Ecology (Schnitzer S and Carson W, eds.). Blackwell Scientific, London, 254-271.
6. Arnold AE and Herre EA (2003). Canopy cover and leaf age affect colonization by tropical fungal endophytes: Ecological pattern and process in Theobroma cacao (Malvaceae). Mycologia 95: 388-398.
7. Arnold AE and Engelbrecht BMJ (2007). Fungal endophytes nearly double minimum leaf conductance in seedlings of a tropical tree. J. Trop. Ecol. 23: 369-372.
8. Arnold AE, Maynard Z, Gilbert GS and Coley PD (2000). Are tropical fungal endophytes hyperdiverse? Ecol. Lett. 3: 267-274.
9. Banerjee D (2011). Endophytic fungal diversity in tropical and subtropical plants. Res. J. Microbiol. 6: 54-62.
10. Bernardi-Wenzel J, Garcia A, Rubin Filho CJ, Prioli AJ, et al. (2010). Evaluation of foliar fungal endophyte diversity and colonization of medicinal plant Luehea divaricata (Martius et Zuccarini). Biol. Res. 43: 375-384.
11. Botella L and Diez J (2011). Phylogenic diversity of fungal endophytes in Spanish stands of Pinus halepensis. Fungal Divers. 47: 9-18.
12. Cai L, Hyde KD, Taylor PWJ and Weir BS (2009). A polyphasic approach for studying Colletotrichum. Fungal Divers. 39: 183-204.
13. Carroll G (1988). Fungal endophytes in stems and leaves: from latent pathogens to mutualistic symbionts. Ecology 69: 2-9.
14. Ding T, Jiang T, Zhou J, Xu L, et al. (2010). Evaluation of antimicrobial activity of endophytic fungi from Camptotheca acuminata (Nyssaceae). Genet. Mol. Res. 9: 2104-2112.
15. Gazis R and Chaverri P (2010). Diversity of fungal endophytes in leaves and stems of wild rubber trees (Hevea brasiliensis) in Peru. Fungal Ecol. 3: 240-254.
16. González V and Tello ML (2011). The endophytic mycota associated with Vitis vinifera in central Spain. Fungal Divers. 47: 29-42.
17. Guimarães EF and Giordano LCS (2004). Piperaceae do Nordeste brasileiro I: estado do Ceará. Rodriguésia 55: 21-46.
18. Hanada RE, Pomella AW, Costa HS, Bezerra JL, et al. (2010). Endophytic fungal diversity in Theobroma cacao (cacao) and T. grandiflorum (cupuaçu) trees and their potential for growth promotion and biocontrol of black-pod disease. Fungal Biol. 114: 901-910.
19. Herre EA, Van Bael SA, Maynard Z and Robbins N (2005). Tropical Plants as Chimera: Some Implications of Foliar Endophytic Fungi for the Study of Host Plant Defense, Physiology, and Genetics. In: Biotic Interactions in the Tropics (Burslem DFRP, Pinard MA and Hartley SE, eds.). Cambridge University Press, Cambridge, 226-237.
20. Magnani M, Fernandes T, Prete CEC and Homechim M (2005). Molecular identification of Aspergillus spp. isolated from coffee beans. Sci. Agric. 62: 45-49.
21. Pamphile JA and Azevedo JL (2002). Molecular characterization of endophytic strains of Fusarium verticillioides (=Fusarium moniliforme) from maize (Zea mays L.). World J. Microbiol. Biotechnol. 18: 391-396.
22. Pamphile JA, Rocha CLMSC and Azevedo JL (2004). Co-transformation of a tropical maize endophytic isolate of Fusarium verticillioides (synonym F. moniliforme) with gusA and nia genes. Genet. Mol. Biol. 27: 253-258.
23. Petrini O, Stone J and Carroll FE (1982). Endophytic fungi in evergreen shrubs in western Oregon: a preliminary study. Can. J. Bot. 60: 789-796.
24. Pinruan U, Rungjindamai N, Choeyklin R and Lumyong S (2010). Occurrence and diversity of basidiomycetous endophytes from the oil palm, Elaeis guineensis in Thailand. Fungal Divers. 41: 71-88.
25. Pinto LSRC, Azevedo JL, Pereira JO and Carneiro Vieira ML (2000). Symptomless infection of banana and maize by endophytic fungi impairs photosynthetic efficiency. New Phytol. 147: 609-615.
26. Procópio RE, Araujo WL, Maccheroni W Jr and Azevedo JL (2009). Characterization of an endophytic bacterial community associated with Eucalyptus spp. Genet. Mol. Res. 8: 1408-1422.
27. Ragozine VK (2008). Analyses of Ribosomal DNA Internal Transcribed Spacer Sequences from Juglans nigra and Leaf-Associated Fungi in Zoar Valley, NY. Master's thesis, Youngstown State University, Youngstown.
28. Rocha ACS, Garcia D, Uetanabaro APT and Carneiro RTO (2011). Foliar endophytic fungi from Hevea brasiliensis and their antagonism on Microcyclus ulei. Fungal Divers. 47: 75-84.
29. Roíg y Mesa JT (1945). Plantas Medicinales. Ministerio de Agricultura: Serviço de Publicidade y Divulgación, Habana.
30. Saikkonen K and Helander SSM (2010). Defensive mutualism between plants and endophytic fungi? Fungal Divers. 41: 101-113.
31. Saitou N and Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
32. Sakayaroj J, Preedanon S and Supaphon O (2010). Phylogenetic diversity of endophyte assemblages associated with the tropical seagrass Enhalus acoroides in Thailand. Fungal Divers. 42: 27-45.
33. Sánchez Márquez S, Bills GF and Zabalgogeazcoa I (2007). The endophytic mycobiota of the grass Dactylis glomerata. Fungal Divers. 27: 171-195.
34. Sánchez Márquez S, Bills GF, Herrero N and Zabalgogeazcoa I (2011). Non-systemic fungal endophytes of grasses. Fungal Ecol. 5: 289-297.
35. Sieber T (2007). Endophytic fungi in forest trees: are they mutualists? Fungal Biol. Rev. 21: 75-89.
36. Sun X, Guo LD and Hyde KD (2011). Community composition of endophytic fungi in Acer truncatum and their role in decomposition. Fungal Divers. 47: 85-95.
37. Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
38. Van Bael SA, Maynard Z, Robbins N and Bischoff J (2005). Emerging Perspectives on the Ecological Roles of Endophytic Fungi in Tropical Plants. In: The Fungal Community: Its Organization and Role in the Ecosystem (White JF Jr, Dighton J and Oudemans P, eds.). Marcel-Dekker, New York, 181-191.
39. White TJ, Bruns TD, Lee S and Taylor JW (1990). Amplification and Direct Sequencing of Fungal Ribosomal RNA Genes for Phylogenetics. In: PCR Protocols: a Guide to Methods and Applications (Innis MA, Gelfand DH, Sninsky JJ and White TJ, eds). Academic Press, San Diego, 315-322.
40. Yandry RRJ, Fernandez ED, Rodolfi M and Solveig T (2006). Actividad antagónica de hongos endófitos de plantas medicinales del Ecuador sobre bacterias patógenas. Bol. Micol. 21: 49-53.