Characterization of an endophytic bacterial community associated with Eucalyptus spp

Genetics and Molecular Research

Volumn 8, Issue 4, 2009, Pages 1408-1422

  Procopio R E L ^a   Araujo W L ^a,c   Maccheroni Jr , W ^b   Azevedo, J L ^a,c  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b Canavialis   (Brazil)

^c UNIVERSIDADE DE MOGI DAS CRUZES   (Brazil)

Author keywords

Endophytic bacteria; Erwinia; Pantoea; Plant bacteria interaction

Indexed keywords

DNA 16S; RIBOSOME DNA;

ACINETOBACTER; AMPLIFIED RIBOSOMAL DNA RESTRICTION ANALYSIS; ARTICLE; BREVIBACILLUS; BURKHOLDERIA CEPACIA; DNA SEQUENCE; ERWINIA; EUCALYPTUS; EUCALYPTUS CITRIODORA; EUCALYPTUS GRANDIS; EUCALYPTUS UROPHYLLA; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; ISOLATION PROCEDURE; LACTOCOCCUS LACTIS; MICROBIAL COMMUNITY; NONHUMAN; PANTOEA; PSEUDOMONAS; RANDOM AMPLIFIED POLYMORPHIC DNA; RHIZOBIUM;

BACTERIA; BASE SEQUENCE; DNA PRIMERS; DNA, RIBOSOMAL; EUCALYPTUS; GENOTYPE; HAPLOTYPES; PHYLOGENY; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; RNA, RIBOSOMAL, 16S; SPECIES SPECIFICITY;

ACINETOBACTER; AGROBACTERIUM SP.; BACTERIA (MICROORGANISMS); BREVIBACILLUS; BURKHOLDERIA CEPACIA; CORYMBIA CITRIODORA; CURTOBACTERIUM; ERWINIA; EUCALYPTUS; EUCALYPTUS CAMALDULENSIS; EUCALYPTUS GRANDIS; EUCALYPTUS PELLITA; EUCALYPTUS TORELLIANA; EUCALYPTUS UROPHYLLA; FUNGI; LACTOCOCCUS LACTIS; PANTOEA; PSEUDOMONAS;

EID: 73449140472     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/vol8-4gmr691     Document Type: Article

References (36)

1. Adams PD and Kloepper JW (2002). Effect of host genotype on indigenous bacterial endophytes of cotton (Gossypium hirsutum L.) Plant Soil 240: 181-189.
2. Amarger N (2002). Genetically modified bacteria in agriculture. Biochimie 84: 1061-1072.
3. Araújo WL, Maccheroni W Jr, Aguilar-Vildoso CI, Barroso PA, et al. (2001). Variability and interactions between endophytic bacteria and fungi isolated from leaf tissues of citrus rootstocks. Can. J. Microbiol. 47: 229-236.
4. Araújo WL, Marcon J, Maccheroni W Jr, Van Elsas JD, et al. (2002). Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants. Appl. Environ. Microbiol. 68: 4906-4914.
5. Azevedo JL, Maccheroni W Jr, Pereira JO and Araújo WL (2000). Endophytic microorganisms: a review on insect control and recent advances on tropical plants. Electr. J. Biotechnol. 3: 40-65.
6. Carroll GC (1986). The Biology of Endophytism in Plants with Particular Reference to Woody Perennials. In: Microbiology of Phyllosphere (Fokkema NJ and van den Heuvel J, eds.). Cambridge University Press, London, 205-222.
7. Chanway CP (1997). Inoculation of tree roots with plant growth promoting soil bacteria: an emerging technology for reforestation. Forest Sci. 43: 99-112.
8. Cho KM, Hong SY, Lee SM, Kim YH, et al. (2007). Endophytic bacterial communities in ginseng and their antifungal activity against pathogens. Microb. Ecol. 54: 341-351.
9. Coutinho TA, Preisig O, Mergaert J, Cnockaert MC, et al. (2002). Bacterial blight and dieback of Eucalyptus species, hybrids, and clones in South Africa. Plant Dis. 86: 20-25.
10. Elvira-Recuenco M and Van Vuurde JW (2000). Natural incidence of endophytic bacteria in pea cultivars under field conditions. Can. J. Microbiol. 46: 1036-1041.
11. Fiore A, Laevens S, Bevivino A, Dalmastri C, et al. (2001). Burkholderia cepacia complex: distribution of genomovars among isolates from the maize rhizosphere in Italy. Environ. Microbiol. 3: 137-143.
12. Hallmann J, Mahaffee WF, Kloepper JW and Quadthallmann A (1997). Bacterial endophytes in agricultural crops. Can. J. Microbiol. 43: 895-914.
13. Kuklinsky-Sobral J, Araújo WL, Mendes R, Geraldi IO, et al. (2004). Isolation and characterization of soybean-associated bacteria and their potential for plant growth promotion. Environ. Microbiol. 6: 1244-1251.
14. Kwon SW, Go SJ, Kang HW, Ryu JC, et al. (1997). Phylogenetic analysis of Erwinia species based on 16S rRNA gene sequences. Int. J. Syst. Bacteriol. 47: 1061-1067.
15. Lacava PT, Araújo WL, Marcon J, Maccheroni W Jr, et al. (2004). Interaction between endophytic bacteria from citrus plants and the phytopathogenic bacteria Xylella fastidiosa, causal agent of citrus-variegated chlorosis. Lett. Appl. Microbiol. 39: 55-59.
16. Li JH, Wang ET, Chen WF and Chen WX (2008). Genetic diversity and potential for promotion of plant growth detected in nodule endophytic bacteria of soybean grown in Heilongjiang province of China. Soil Biol. Biochem. 40: 238-246.
17. Lodewyckx C, Vangronsveld J, Porteous F, Moore ERB, et al. (2002). Endophytic bacteria and their potential applications. Crit. Rev. Plant Sci. 21: 583-606.
18. Mendes R, Pizzirani-Kleiner AA, Araújo WL and Raaijmakers JM (2007). Diversity of cultivated endophytic bacteria from sugarcane: genetic and biochemical characterization of Burkholderia cepacia complex isolates. Appl. Environ. Microbiol. 73: 7259-7267.
19. Misaghi IJ and Donndelinger CR (1990). Endophytic bacteria in symptom-free cotton plants. Phytopathology 80: 808-811.
20. Petrini O (1991). Fungal Endophyte of Tree Leaves. In: Microbial Ecology of Leaves (Andrews J and Hirano SS, eds.). Spring-Verlag, New York, 179-197.
21. Pleban S, Ingel F and Chet I (1995). Control of Rhizoctonia solani and Sclerotium rolfsii in the greenhouse using endophytic Bacillus spp. Eur. J. Plant Pathol. 101: 665-672.
22. Quecine MC, Araujo WL, Marcon J, Gai CS, et al. (2008). Chitinolytic activity of endophytic Streptomyces and potential for biocontrol. Lett. Appl. Microbiol. 47: 486-491.
23. Raja P, Balachandar D and Sundaram SP (2008). Genetic diversity and phylogeny of pink-pigmented facultative methylotrophic bacteria isolated from the phyllosphere of tropical crop plants. Biol. Fertil. Soils 45: 45-53.
24. Ramesh R, Joshi AA and Ghanekar MP (2009). Pseudomonads: major antagonistic endophytic bacteria to suppress bacterial wilt pathogen, Ralstonia solanacearum in the eggplant (Solanum melongena L.). World J. Microbiol. Biotechnol. 25: 47-55.
25. Saikkonen K, Faeth SH, Helander M and Sullivan TJ (1998). Fungal endophytes: a continuum of interactions with host plants. Ann. Rev. Ecol. Syst. 29: 319-343.
26. Sambrook J, Fritsch EFE and Maniatis T (1989). Molecular Cloning - A Laboratory Manual. Cold Spring Harbor Laboratory Press, New York.
27. Sikora RA, Pocasangre L, Felde A, Niere B, et al. (2008). Mutualistic endophytic fungi and in-planta suppressiveness to plant parasitic nematodes. Biol. Control 46: 15-23.
28. Sturz AV, Christie BR and Nowak J (2000). Bacterial endophytes: potential role in developing sustainable systems of crop production. Crit. Rev. Plant Sci. 19: 1-30.
29. Sun L, Qiu F, .hang X, Dai X, et al. (2008). Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis. Microb. Ecol. 55: 415-424.
30. Ting ASY, Meon S, Kadir J, Radu S, et al. (2008). Endophytic microorganisms as potential growth promoters of banana. BioControl 53: 541-553.
31. Torres AR, Araújo WL, Cursino L, Hungria M, et al. (2008). Diversity of endophytic enterobacteria associated with different host plants. J. Microbiol. 46: 373-379.
32. Waleron M, Waleron K, Podhajska AJ and Lojkowska E (2002). Genotyping of bacteria belonging to the former Erwinia genus by PCR-RFLP analysis of a recA gene fragment. Microbiology 148: 583-595.
33. Wang ET, Tan .Y, Guo XW, Rodriguez-Duran R, et al. (2006). Diverse endophytic bacteria isolated from a leguminous tree Conzattia multiflora grown in Mexico. Arch. Microbiol. 186: 251-259.
34. Yang JH, Liu HX, .hu GM, Pan YL, et al. (2008). Diversity analysis of antagonists from rice-associated bacteria and their application in biocontrol of rice diseases. J. Appl. Microbiol. 104: 91-104.
35. Yap I and Nelson RJ (1996). Winboot: A Program for Performing Bootstrap Analysis of Binary Data to Determine the Confidence Limits of UPGMA-based Dendrograms. International Rice Research Institute, Manila.
36. Zhang GX, Peng GX, Wang ET, Yan H, et al. (2008). Diverse endophytic nitrogen-fixing bacteria isolated from wild rice Oryza rufipogon and description of Phytobacter diazotrophicus gen. nov. sp. nov. Arch. Microbiol. 189: 431-439.