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Volumn 11, Issue 4, 2012, Pages 3547-3567

Isolation and in silico functional analysis of MtATP6, a 6-kDa subunit of mitochondrial F1F0-ATP synthase, in response to abiotic stress

Author keywords

MtATP6; Wheat; Abiotic stresses; In silico functional analysis

Indexed keywords

CIS ACTING ELEMENT; GT ELEMENT; MESSENGER RNA; MYC PROTEIN; PROTEIN ABRE; PROTEIN MYB; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; SIGNAL PEPTIDE; UNCLASSIFIED DRUG;

EID: 84930473535     PISSN: None     EISSN: 16765680     Source Type: Journal    
DOI: 10.4238/2012.October.4.3     Document Type: Article
Times cited : (19)

References (44)
  • 1
    • 0028114231 scopus 로고
    • Structure at 2.8A{hook above} resolution of F1-ATPase from bovine heart mitochondria
    • Abrahams JP, Andrew GWL, Lutter R and Walker JE (1994). Structure at 2.8A{hook above} resolution of F1-ATPase from bovine heart mitochondria. Nature 370: 621-628.
    • (1994) Nature , vol.370 , pp. 621-628
    • Abrahams, J.P.1    Andrew, G.W.L.2    Lutter, R.3    Walker, J.E.4
  • 2
    • 79959712508 scopus 로고    scopus 로고
    • A role for anions in ATP synthesis and its molecular mechanistic interpretation
    • Agarwal B (2011). A role for anions in ATP synthesis and its molecular mechanistic interpretation. J. Bioenerg. Biomembr. 43: 299-310.
    • (2011) J. Bioenerg. Biomembr. , vol.43 , pp. 299-310
    • Agarwal, B.1
  • 3
    • 0032534790 scopus 로고    scopus 로고
    • Yeast mitochondrial F1F0-ATP synthase exists as a dimer: Identification of three dimer-specific subunits
    • Arnold I, Pfeiffer K, Neupert W, Stuart RA, et al. (1998). Yeast mitochondrial F1F0-ATP synthase exists as a dimer: identification of three dimer-specific subunits. EMBO J. 17: 7170-7178.
    • (1998) EMBO J. , vol.17 , pp. 7170-7178
    • Arnold, I.1    Pfeiffer, K.2    Neupert, W.3    Stuart, R.A.4
  • 4
    • 8744219628 scopus 로고    scopus 로고
    • Moving proteins across and in outer and innermembranes of mitochondria. Biochem. Soc
    • Chacinska A and Rehling P (2004). Moving proteins across and in outer and innermembranes of mitochondria. Biochem. Soc. Trans. 32: 774-776.
    • (2004) Trans. , vol.32 , pp. 774-776
    • Chacinska, A.1    Rehling, P.2
  • 5
    • 14844342962 scopus 로고    scopus 로고
    • Understanding and improving salt tolerance in plants
    • Chinnusamy V, Jagendorf A and Zhu J (2005). Understanding and improving salt tolerance in plants. Crop Sci. 45: 437-448.
    • (2005) Crop Sci. , vol.45 , pp. 437-448
    • Chinnusamy, V.1    Jagendorf, A.2    Zhu, J.3
  • 6
    • 0034786236 scopus 로고    scopus 로고
    • Significance of the V-type ATPase for the adaptation to stressful growth conditions and its regulation on the molecular and biochemical levels
    • Dietz KJ, Tavakoli N, Kluge C, Mimura T, et al. (2001). Significance of the V-type ATPase for the adaptation to stressful growth conditions and its regulation on the molecular and biochemical levels. J. Exp. Bot. 52: 1969-1980.
    • (2001) J. Exp. Bot. , vol.52 , pp. 1969-1980
    • Dietz, K.J.1    Tavakoli, N.2    Kluge, C.3    Mimura, T.4
  • 7
    • 80051520830 scopus 로고    scopus 로고
    • Prediction of thermostability from amino acid attributes by combination of clustering with attribute weighting: A new vista in engineering enzymes
    • Ebrahimi M, Lakizadeh A, Agha-Golzadeh P, Ebrahimie E, et al. (2011). Prediction of thermostability from amino acid attributes by combination of clustering with attribute weighting: A new vista in engineering enzymes. PLoS One 6: e23146.
    • (2011) PLoS One , vol.6
    • Ebrahimi, M.1    Lakizadeh, A.2    Agha-Golzadeh, P.3    Ebrahimie, E.4
  • 8
    • 34248531753 scopus 로고    scopus 로고
    • Locating proteins in the cell using TargetP, SignalP, and related tools
    • Emanuelsson O, Brunak S, von Heijne G and Nielsen H (2007). Locating proteins in the cell using TargetP, SignalP, and related tools. Nat. Protoc. 2: 953-971.
    • (2007) Nat. Protoc. , vol.2 , pp. 953-971
    • Emanuelsson, O.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 9
    • 77950882069 scopus 로고    scopus 로고
    • Yeast functional screen to identify genetic determinants capable of conferring abiotic stress tolerance in Jatropha curcas
    • Eswaran N, Parameswaran S, Sathram B, Anantharaman B, et al. (2010). Yeast functional screen to identify genetic determinants capable of conferring abiotic stress tolerance in Jatropha curcas. BMC Biotechnol. 10: 23.
    • (2010) BMC Biotechnol. , vol.10 , pp. 23
    • Eswaran, N.1    Parameswaran, S.2    Sathram, B.3    Anantharaman, B.4
  • 10
    • 77950966361 scopus 로고    scopus 로고
    • Triticeae: The Ultimate Source of Abiotic Stress Tolerance Improvement in Wheat. In: Salinity and Water Stress (Ashraf M, Ozturk M and Athar HR, eds.)
    • Farooq S (2009). Triticeae: The Ultimate Source of Abiotic Stress Tolerance Improvement in Wheat. In: Salinity and Water Stress (Ashraf M, Ozturk M and Athar HR, eds.). Springer-Verlag, Berlin, 7: 65-71.
    • (2009) Springer-Verlag, Berlin , vol.7 , pp. 65-71
    • Farooq, S.1
  • 11
    • 0023687818 scopus 로고
    • Mitochondrial targeting sequences. Why 'non-amphiphilic' peptides may still be amphiphilic
    • Gavel Y, Nilsson L and von Heijne G (1988). Mitochondrial targeting sequences. Why 'non-amphiphilic' peptides may still be amphiphilic. FEBS Lett. 235: 173-177.
    • (1988) FEBS Lett. , vol.235 , pp. 173-177
    • Gavel, Y.1    Nilsson, L.2    von Heijne, G.3
  • 13
    • 0035034850 scopus 로고    scopus 로고
    • Induction of vacuolar ATPase and mitochondrial ATP synthase by aluminum in an aluminum-resistant cultivar of wheat
    • Hamilton CA, Good AG and Taylor GJ (2001). Induction of vacuolar ATPase and mitochondrial ATP synthase by aluminum in an aluminum-resistant cultivar of wheat. Plant Physiol. 125: 2068-2077.
    • (2001) Plant Physiol. , vol.125 , pp. 2068-2077
    • Hamilton, C.A.1    Good, A.G.2    Taylor, G.J.3
  • 15
    • 0032478354 scopus 로고    scopus 로고
    • F1-ATPase: A rotary motor made of a single molecule
    • Kinosita K, Yasuda R, Noji H, Ishiwata S, et al. (1998). F1-ATPase: a rotary motor made of a single molecule. Cell 93: 21-24.
    • (1998) Cell , vol.93 , pp. 21-24
    • Kinosita, K.1    Yasuda, R.2    Noji, H.3    Ishiwata, S.4
  • 16
    • 0029895982 scopus 로고    scopus 로고
    • RNA/DNA mini-prep from a single sample of orchid tissue
    • Knapp JE and Chandlee JM (1996). RNA/DNA mini-prep from a single sample of orchid tissue. Biotechniques 21: 54-56.
    • (1996) Biotechniques , vol.21 , pp. 54-56
    • Knapp, J.E.1    Chandlee, J.M.2
  • 17
    • 0035537808 scopus 로고    scopus 로고
    • Physiological characteristics and alternative respiratory pathway under salt stress in two wheat cultivars differing in salt tolerance
    • Kong Y, Zhou G and Wang Y (2001). Physiological characteristics and alternative respiratory pathway under salt stress in two wheat cultivars differing in salt tolerance. Russ. J. Plant Physiol. 48: 595-600.
    • (2001) Russ. J. Plant Physiol. , vol.48 , pp. 595-600
    • Kong, Y.1    Zhou, G.2    Wang, Y.3
  • 18
    • 13444254300 scopus 로고    scopus 로고
    • PDBsum more: New summaries and analyses of the known 3D structures of proteins and nucleic acids
    • Laskowski RA, Chistyakov VV and Thornton JM (2005). PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids. Nucleic Acids Res. 33: D266-D268.
    • (2005) Nucleic Acids Res. , vol.33
    • Laskowski, R.A.1    Chistyakov, V.V.2    Thornton, J.M.3
  • 19
    • 0036085047 scopus 로고    scopus 로고
    • PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
    • Lescot M, Déhais P, Thijs G, Marchal K, et al. (2002). PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res. 30: 325-327.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 325-327
    • Lescot, M.1    Déhais, P.2    Thijs, G.3    Marchal, K.4
  • 20
    • 4444274532 scopus 로고    scopus 로고
    • Expression and purification of a novel rice (Oryza sativa L.) mitochondrial ATP synthase small subunit in Escherichia coli
    • Liu S and Zhang X (2004). Expression and purification of a novel rice (Oryza sativa L.) mitochondrial ATP synthase small subunit in Escherichia coli. Protein Expr. Purif. 37: 306-310.
    • (2004) Protein Expr. Purif. , vol.37 , pp. 306-310
    • Liu, S.1    Zhang, X.2
  • 21
    • 28444441250 scopus 로고    scopus 로고
    • Cold, salinity and drought stresses: An overview
    • Mahajan S and Tuteja N (2005). Cold, salinity and drought stresses: an overview. Arch. Biochem Biophys. 444: 139-158.
    • (2005) Arch. Biochem Biophys. , vol.444 , pp. 139-158
    • Mahajan, S.1    Tuteja, N.2
  • 22
    • 84867256737 scopus 로고    scopus 로고
    • The effects of mitochondrial dysfunction in schizophrenia
    • Manatt M and Chandra SB (2011). The effects of mitochondrial dysfunction in schizophrenia. J. Med. Genet. Genom. 3: 84-94.
    • (2011) J. Med. Genet. Genom. , vol.3 , pp. 84-94
    • Manatt, M.1    Chandra, S.B.2
  • 23
    • 18344364099 scopus 로고    scopus 로고
    • Understanding alternative splicing: Towards a cellular code
    • Matlin AJ, Clark F and Smith CW (2005). Understanding alternative splicing: towards a cellular code. Nat. Rev. Mol. Cell Biol. 6: 386-398.
    • (2005) Nat. Rev. Mol. Cell Biol. , vol.6 , pp. 386-398
    • Matlin, A.J.1    Clark, F.2    Smith, C.W.3
  • 24
    • 39749155929 scopus 로고    scopus 로고
    • Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis
    • Meyer EH, Taylor NL and Millar AH (2008). Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. J. Proteome Res. 7: 786-794.
    • (2008) J. Proteome Res. , vol.7 , pp. 786-794
    • Meyer, E.H.1    Taylor, N.L.2    Millar, A.H.3
  • 26
    • 77950990834 scopus 로고    scopus 로고
    • Drought and salt tolerances in wild relatives for wheat and barley improvement
    • Nevo E and Chen G (2010). Drought and salt tolerances in wild relatives for wheat and barley improvement. Plant Cell Environ. 33: 670-685.
    • (2010) Plant Cell Environ. , vol.33 , pp. 670-685
    • Nevo, E.1    Chen, G.2
  • 27
    • 85080625070 scopus 로고    scopus 로고
    • Quantitative expression analysis of TaSOS1 and TaSOS4 genes in cultivated and wild wheat plants under salt stress
    • Epub ahead of print
    • Ramezani A, Niazi A, Moghadam AA, Zamani BM, et al. (2012). Quantitative expression analysis of TaSOS1 and TaSOS4 genes in cultivated and wild wheat plants under salt stress. Mol. Biotech. Epub ahead of print.
    • (2012) Mol. Biotech.
    • Ramezani, A.1    Niazi, A.2    Moghadam, A.A.3    Zamani, B.M.4
  • 28
    • 0029979607 scopus 로고    scopus 로고
    • Common principles of protein translocation across membranes
    • Schatz G and Dobberstein B (1996). Common principles of protein translocation across membranes. Science 271: 1519-1526.
    • (1996) Science , vol.271 , pp. 1519-1526
    • Schatz, G.1    Dobberstein, B.2
  • 29
    • 0036791468 scopus 로고    scopus 로고
    • Regulation of expression of the vacuolar Na+/H+ antiporter gene AtNHX1 by salt stress and abscisic acid
    • Shi H and Zhu JK (2002). Regulation of expression of the vacuolar Na+/H+ antiporter gene AtNHX1 by salt stress and abscisic acid. Plant Mol. Biol. 50: 543-550.
    • (2002) Plant Mol. Biol. , vol.50 , pp. 543-550
    • Shi, H.1    Zhu, J.K.2
  • 30
    • 0034028259 scopus 로고    scopus 로고
    • Molecular responses to dehydration and low temperature: Differences and cross-talk between two stress signaling pathways
    • Shinozaki K and Yamaguchi-Shinozaki K (2000). Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr. Opin. Plant Biol. 3: 217-223.
    • (2000) Curr. Opin. Plant Biol. , vol.3 , pp. 217-223
    • Shinozaki, K.1    Yamaguchi-Shinozaki, K.2
  • 31
    • 79953189020 scopus 로고    scopus 로고
    • Halotolerant cyanobacterium Aphanothece halophytica contains a Na+-dependent F1F0-ATP synthase with potential role in salt-stress tolerance
    • Soontharapirakkul K, Promden W, Yamada N, Kageyama H, et al. (2011). Halotolerant cyanobacterium Aphanothece halophytica contains a Na+-dependent F1F0-ATP synthase with potential role in salt-stress tolerance. J. Biol. Chem. 286: 10169-10176.
    • (2011) J. Biol. Chem. , vol.286 , pp. 10169-10176
    • Soontharapirakkul, K.1    Promden, W.2    Yamada, N.3    Kageyama, H.4
  • 32
    • 34250662313 scopus 로고    scopus 로고
    • Disorders of nuclear-mitochondrial intergenomic communication
    • Spinazzola A and Zeviani M (2007). Disorders of nuclear-mitochondrial intergenomic communication. Biosci. Rep. 27: 39-51.
    • (2007) Biosci. Rep. , vol.27 , pp. 39-51
    • Spinazzola, A.1    Zeviani, M.2
  • 33
    • 58849147424 scopus 로고    scopus 로고
    • Thiourea modulates the expression and activity profile of mtATP synthase under salinity stress in seeds of Brassica juncea
    • Srivastava AK, Ramaswamy NK, Mukopadhyaya R, Chiramal JM, et al. (2009). Thiourea modulates the expression and activity profile of mtATP synthase under salinity stress in seeds of Brassica juncea. Ann. Bot. 103: 403-410.
    • (2009) Ann. Bot. , vol.103 , pp. 403-410
    • Srivastava, A.K.1    Ramaswamy, N.K.2    Mukopadhyaya, R.3    Chiramal, J.M.4
  • 35
    • 62949165564 scopus 로고    scopus 로고
    • Isolation and characterization of a novel antistress gene from Chlamydomonas sp. W80
    • Suda Y, Yoshikawa T, Okuda Y, Tsunemoto M, et al. (2009). Isolation and characterization of a novel antistress gene from Chlamydomonas sp. W80. J. Biosci. Bioeng. 107: 352-354.
    • (2009) J. Biosci. Bioeng. , vol.107 , pp. 352-354
    • Suda, Y.1    Yoshikawa, T.2    Okuda, Y.3    Tsunemoto, M.4
  • 36
    • 33947281384 scopus 로고    scopus 로고
    • The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids
    • Sun S, Kondabagil K, Gentz PM, Rossmann MG, et al. (2007). The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids. Mol. Cell 25: 943-949.
    • (2007) Mol. Cell , vol.25 , pp. 943-949
    • Sun, S.1    Kondabagil, K.2    Gentz, P.M.3    Rossmann, M.G.4
  • 37
    • 84861830797 scopus 로고    scopus 로고
    • Genome-wide analysis of cytosolic and chloroplastic isoforms of glutathione reductase in plant cells
    • Tahmasebi A, Aram F, Ebrahimi M, Mohammadi-Dehcheshmeh M, et al. (2012). Genome-wide analysis of cytosolic and chloroplastic isoforms of glutathione reductase in plant cells. Plant Omics J. 5: 94-102.
    • (2012) Plant Omics J. , vol.5 , pp. 94-102
    • Tahmasebi, A.1    Aram, F.2    Ebrahimi, M.3    Mohammadi-Dehcheshmeh, M.4
  • 40
    • 42449103989 scopus 로고    scopus 로고
    • Coordination of gene expression between organellar and nuclear genomes
    • Woodson JD and Chory J (2008). Coordination of gene expression between organellar and nuclear genomes. Nat. Rev. Genet. 9: 383-395.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 383-395
    • Woodson, J.D.1    Chory, J.2
  • 41
    • 4444328275 scopus 로고    scopus 로고
    • Identification and characterization of mitochondrial ATP synthase small subunit gene in rice (Oryza sativa L.)
    • Zhang XX and Liu SK (2003). Identification and characterization of mitochondrial ATP synthase small subunit gene in rice (Oryza sativa L.). Mol. Plant Breed. 1: 605-612.
    • (2003) Mol. Plant Breed. , vol.1 , pp. 605-612
    • Zhang, X.X.1    Liu, S.K.2
  • 42
    • 29344458342 scopus 로고    scopus 로고
    • Identification of a mitochondrial ATP synthase small subunit gene (RMtATP6) expressed in response to salts and osmotic stresses in rice (Oryza sativa L.)
    • Zhang XX, Takano T and Liu SK (2006). Identification of a mitochondrial ATP synthase small subunit gene (RMtATP6) expressed in response to salts and osmotic stresses in rice (Oryza sativa L.). J. Exp. Bot. 57: 193-200.
    • (2006) J. Exp. Bot. , vol.57 , pp. 193-200
    • Zhang, X.X.1    Takano, T.2    Liu, S.K.3
  • 43
    • 44949178483 scopus 로고    scopus 로고
    • Overexpression of a mitochondrial ATP synthase small subunit gene (AtMtATP6) confers tolerance to several abiotic stresses in Saccharomyces cerevisiae and Arabidopsis thaliana
    • Zhang XX, Liu SK and Takano T (2008). Overexpression of a mitochondrial ATP synthase small subunit gene (AtMtATP6) confers tolerance to several abiotic stresses in Saccharomyces cerevisiae and Arabidopsis thaliana. Biotechnol. Lett. 30: 1289-1294.
    • (2008) Biotechnol. Lett. , vol.30 , pp. 1289-1294
    • Zhang, X.X.1    Liu, S.K.2    Takano, T.3
  • 44
    • 0036999615 scopus 로고    scopus 로고
    • Salt and drought stress signal transduction in plants
    • Zhu JK (2002). Salt and drought stress signal transduction in plants. Annu. Rev. Plant Biol. 53: 247-273.
    • (2002) Annu. Rev. Plant Biol. , vol.53 , pp. 247-273
    • Zhu, J.K.1


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