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Volumn 6, Issue 10, 2015, Pages 1807-1812

Filtering with Electric Field: The Case of E. coli Porins

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTICS; ELECTRIC FIELDS; ESCHERICHIA COLI; FREE ENERGY; MOLECULAR DYNAMICS; PROTEINS;

EID: 84930227341     PISSN: None     EISSN: 19487185     Source Type: Journal    
DOI: 10.1021/acs.jpclett.5b00612     Document Type: Article
Times cited : (50)

References (25)
  • 1
    • 0033516590 scopus 로고    scopus 로고
    • The Cavity and Pore Helices in the KcsA K+ Channel: Electrostatic Stabilization of Monovalent Cations
    • Roux, B.; MacKinnon, R. The Cavity and Pore Helices in the KcsA K+ Channel: Electrostatic Stabilization of Monovalent Cations Science 1999, 285, 100 - 102
    • (1999) Science , vol.285 , pp. 100-102
    • Roux, B.1    MacKinnon, R.2
  • 2
    • 0035861454 scopus 로고    scopus 로고
    • Water Permeation Across Biological Membranes: Mechanism and Dynamics of Aquaporin-1 and GlpF
    • de Groot, B. L.; Grubmüller, H. Water Permeation Across Biological Membranes: Mechanism and Dynamics of Aquaporin-1 and GlpF Science 2001, 294, 2353 - 2357
    • (2001) Science , vol.294 , pp. 2353-2357
    • De Groot, B.L.1    Grubmüller, H.2
  • 4
    • 24644451580 scopus 로고    scopus 로고
    • Orientation Discrimination of Single-Stranded DNA Inside the A-Hemolysin Membrane Channel
    • Mathé, J.; Aksimentiev, A.; Nelson, D.; Schulten, K.; Meller, A. Orientation Discrimination of Single-Stranded DNA Inside the A-Hemolysin Membrane Channel Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 12377 - 12382
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 12377-12382
    • Mathé, J.1    Aksimentiev, A.2    Nelson, D.3    Schulten, K.4    Meller, A.5
  • 5
    • 84905400486 scopus 로고    scopus 로고
    • Charged Residues Distribution Modulates Selectivity of the Open State of Human Isoforms of the Voltage Dependent Anion-Selective Channel
    • Amodeo, G. F.; Scorciapino, M. A.; Messina, A.; De Pinto, V.; Ceccarelli, M. Charged Residues Distribution Modulates Selectivity of the Open State of Human Isoforms of the Voltage Dependent Anion-Selective Channel PLoS One 2014, 9, e103879
    • (2014) PLoS One , vol.9 , pp. e103879
    • Amodeo, G.F.1    Scorciapino, M.A.2    Messina, A.3    De Pinto, V.4    Ceccarelli, M.5
  • 6
    • 80055047308 scopus 로고    scopus 로고
    • Altered Antibiotic Transport in OmpC Mutants Isolated from a Series of Clinical Strains of Multi-Drug Resistant E. coli
    • Lou, H.; Chen, M.; Black, S. S.; Bushell, S. R.; Ceccarelli, M.; Mach, T.; Beis, K.; Low, A. S.; Bamford, V. A.; Booth, I. R.; et al. Altered Antibiotic Transport in OmpC Mutants Isolated From a Series of Clinical Strains of Multi-Drug Resistant E. coli PLoS One 2011, 6, e25825
    • (2011) PLoS One , vol.6 , pp. e25825
    • Lou, H.1    Chen, M.2    Black, S.S.3    Bushell, S.R.4    Ceccarelli, M.5    Mach, T.6    Beis, K.7    Low, A.S.8    Bamford, V.A.9    Booth, I.R.10
  • 8
    • 84879911705 scopus 로고    scopus 로고
    • Permeation Rates of Penicillins Indicate That Escherichia coli Porins Function Principally as Nonspecific Channels
    • Kojima, S.; Nikaido, H. Permeation Rates of Penicillins Indicate That Escherichia coli Porins Function Principally as Nonspecific Channels Proc. Natl. Acad. Sci. U.S.A. 2013, 110, E2629 - E2634
    • (2013) Proc. Natl. Acad. Sci. U.S.A. , vol.110 , pp. E2629-E2634
    • Kojima, S.1    Nikaido, H.2
  • 10
    • 84876080238 scopus 로고    scopus 로고
    • Structure, Function and Regulation of Outer Membrane Proteins Involved in Drug Transport in Enterobactericeae: The OmpF/C - TolC Case
    • Masi, M.; Pagès, J.-M. Structure, Function and Regulation of Outer Membrane Proteins Involved in Drug Transport in Enterobactericeae: the OmpF/C-TolC Case Open Microbiol. J. 2013, 7, 22 - 33
    • (2013) Open Microbiol. J. , vol.7 , pp. 22-33
    • Masi, M.1    Pagès, J.-M.2
  • 11
    • 78149432908 scopus 로고    scopus 로고
    • Structural and Dynamical Properties of the Porins OmpF and OmpC: Insights from Molecular Simulations
    • Kumar, A.; Hajjar, E.; Ruggerone, P.; Ceccarelli, M. Structural and Dynamical Properties of the Porins OmpF and OmpC: Insights From Molecular Simulations J. Phys.: Condens. Matter 2010, 22, 454125
    • (2010) J. Phys.: Condens. Matter , vol.22 , pp. 454125
    • Kumar, A.1    Hajjar, E.2    Ruggerone, P.3    Ceccarelli, M.4
  • 12
    • 84859962388 scopus 로고    scopus 로고
    • Antibiotic Permeation Across the OmpF Channel: Modulation of the Affinity Site in the Presence of Magnesium
    • Raj Singh, P.; Ceccarelli, M.; Lovelle, M.; Winterhalter, M.; Mahendran, K. R. Antibiotic Permeation Across the OmpF Channel: Modulation of the Affinity Site in the Presence of Magnesium J. Phys. Chem. B 2012, 116, 4433 - 4438
    • (2012) J. Phys. Chem. B , vol.116 , pp. 4433-4438
    • Raj Singh, P.1    Ceccarelli, M.2    Lovelle, M.3    Winterhalter, M.4    Mahendran, K.R.5
  • 13
    • 84907202564 scopus 로고    scopus 로고
    • High Salt Concentrations Increase Permeability Through OmpC Channels of Escherichia coli
    • Kojima, S.; Nikaido, H. High Salt Concentrations Increase Permeability Through OmpC Channels of Escherichia coli J. Biol. Chem. 2014, 289, 26464 - 26473
    • (2014) J. Biol. Chem. , vol.289 , pp. 26464-26473
    • Kojima, S.1    Nikaido, H.2
  • 14
    • 56349139534 scopus 로고    scopus 로고
    • The Porin and the Permeating Antibiotic: A Selective Diffusion Barrier in Gram-Negative Bacteria
    • Pagès, J.-M.; James, C. E.; Winterhalter, M. The Porin and the Permeating Antibiotic: a Selective Diffusion Barrier in Gram-Negative Bacteria Nat. Rev. Microbiol. 2008, 6, 893 - 903
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 893-903
    • Pagès, J.-M.1    James, C.E.2    Winterhalter, M.3
  • 15
    • 84877279350 scopus 로고    scopus 로고
    • Platforms for Antibiotic Discovery
    • Lewis, K. Platforms for Antibiotic Discovery Nat. Rev. Drug Discovery 2013, 12, 371 - 387
    • (2013) Nat. Rev. Drug Discovery , vol.12 , pp. 371-387
    • Lewis, K.1
  • 16
    • 84937577985 scopus 로고    scopus 로고
    • Structure-Kinetic Relationship of Carbapenem Antibacterials Permeating Through E. coli OmpC Porin
    • Tran, Q.-T. Structure-Kinetic Relationship of Carbapenem Antibacterials Permeating Through E. coli OmpC Porin Proteins 2014, 1 - 40
    • (2014) Proteins , pp. 1-40
    • Tran, Q.-T.1
  • 17
    • 0037162486 scopus 로고    scopus 로고
    • Designed to Penetrate: Time-Resolved Interaction of Single Antibiotic Molecules with Bacterial Pores
    • Nestorovich, E. M.; Danelon, C.; Winterhalter, M.; Bezrukov, S. M. Designed to Penetrate: Time-Resolved Interaction of Single Antibiotic Molecules with Bacterial Pores Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 9789 - 9794
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 9789-9794
    • Nestorovich, E.M.1    Danelon, C.2    Winterhalter, M.3    Bezrukov, S.M.4
  • 18
    • 33646138013 scopus 로고    scopus 로고
    • Interaction of Zwitterionic Penicillins with the OmpF Channel Facilitates Their Translocation
    • Danelon, C.; Nestorovich, E. M.; Winterhalter, M.; Ceccarelli, M.; Bezrukov, S. M. Interaction of Zwitterionic Penicillins with the OmpF Channel Facilitates Their Translocation Biophys. J. 2006, 90, 1617 - 1627
    • (2006) Biophys. J. , vol.90 , pp. 1617-1627
    • Danelon, C.1    Nestorovich, E.M.2    Winterhalter, M.3    Ceccarelli, M.4    Bezrukov, S.M.5
  • 19
    • 0029863372 scopus 로고    scopus 로고
    • Molecular Dynamics Simulations of Water Within Models of Ion Channels
    • Breed, J.; Sankararamakrishnan, R.; Kerr, I. D.; Sansom, M. S. Molecular Dynamics Simulations of Water Within Models of Ion Channels Biophys. J. 1996, 70, 1643 - 1661
    • (1996) Biophys. J. , vol.70 , pp. 1643-1661
    • Breed, J.1    Sankararamakrishnan, R.2    Kerr, I.D.3    Sansom, M.S.4
  • 21
    • 0033884302 scopus 로고    scopus 로고
    • A Grand Canonical Monte Carlo-Brownian Dynamics Algorithm for Simulating Ion Channels
    • Im, W.; Seefeld, S.; Roux, B. A Grand Canonical Monte Carlo-Brownian Dynamics Algorithm for Simulating Ion Channels Biophys. J. 2000, 79, 788 - 801
    • (2000) Biophys. J. , vol.79 , pp. 788-801
    • Im, W.1    Seefeld, S.2    Roux, B.3
  • 22
    • 0031860932 scopus 로고    scopus 로고
    • A Molecular Dynamics Study of the Pores Formed by Escherichia coli OmpF Porin in a Fully Hydrated Palmitoyloleoylphosphatidylcholine Bilayer
    • Tieleman, D. P.; Berendsen, H. J. A Molecular Dynamics Study of the Pores Formed by Escherichia coli OmpF Porin in a Fully Hydrated Palmitoyloleoylphosphatidylcholine Bilayer Biophys. J. 1998, 74, 2786 - 2801
    • (1998) Biophys. J. , vol.74 , pp. 2786-2801
    • Tieleman, D.P.1    Berendsen, H.J.2
  • 23
    • 84890072910 scopus 로고    scopus 로고
    • Mechanisms of Molecular Transport Through the Urea Channel of Helicobacter Pylori
    • McNulty, R.; Ulmschneider, J. P.; Luecke, H.; Ulmschneider, M. B. Mechanisms of Molecular Transport Through the Urea Channel of Helicobacter Pylori Nat. Commun. 2013, 4, 2900
    • (2013) Nat. Commun. , vol.4 , pp. 2900
    • McNulty, R.1    Ulmschneider, J.P.2    Luecke, H.3    Ulmschneider, M.B.4
  • 24
    • 77949399487 scopus 로고    scopus 로고
    • Permeation of Antibiotics Through Escherichia coli OmpF and OmpC Porins: Screening for Influx on a Single-Molecule Level
    • Mahendran, K. R.; Kreir, M.; Weingart, H.; Fertig, N.; Winterhalter, M. Permeation of Antibiotics Through Escherichia coli OmpF and OmpC Porins: Screening for Influx on a Single-Molecule Level J. Biomol. Screen 2010, 15, 302 - 307
    • (2010) J. Biomol. Screen , vol.15 , pp. 302-307
    • Mahendran, K.R.1    Kreir, M.2    Weingart, H.3    Fertig, N.4    Winterhalter, M.5
  • 25
    • 77954911184 scopus 로고    scopus 로고
    • Molecular Simulations Reveal the Mechanism and the Determinants for Ampicillin Translocation Through OmpF
    • Kumar, A.; Hajjar, E.; Ruggerone, P.; Ceccarelli, M. Molecular Simulations Reveal the Mechanism and the Determinants for Ampicillin Translocation Through OmpF J. Phys. Chem. B 2010, 114, 9608 - 9616
    • (2010) J. Phys. Chem. B , vol.114 , pp. 9608-9616
    • Kumar, A.1    Hajjar, E.2    Ruggerone, P.3    Ceccarelli, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.