-
1
-
-
0034704928
-
Predictive accuracy of population viability analysis in conservation biology
-
Brook, B. W., J. J. O'Grady, A. P. Chapman, M. A. Burgman, H. R. Akcakaya, and R. Frankham. 2000. Predictive accuracy of population viability analysis in conservation biology. Nature 404:385-387.
-
(2000)
Nature
, vol.404
, pp. 385-387
-
-
Brook, B.W.1
O'Grady, J.J.2
Chapman, A.P.3
Burgman, M.A.4
Akcakaya, H.R.5
Frankham, R.6
-
2
-
-
43949115050
-
Embedding population dynamics models in inference
-
Buckland, S. T., K. B. Newman, C. Fernandez, L. Thomas, and J. Harwood. 2007. Embedding population dynamics models in inference. Statistical Science 22:44-58.
-
(2007)
Statistical Science
, vol.22
, pp. 44-58
-
-
Buckland, S.T.1
Newman, K.B.2
Fernandez, C.3
Thomas, L.4
Harwood, J.5
-
3
-
-
0742323619
-
State-space models for the dynamics of wild animal populations
-
Buckland, S. T., K. B. Newman, L. Thomas, and N. B. Koesters. 2004. State-space models for the dynamics of wild animal populations. Ecological Modelling 171:157-175.
-
(2004)
Ecological Modelling
, vol.171
, pp. 157-175
-
-
Buckland, S.T.1
Newman, K.B.2
Thomas, L.3
Koesters, N.B.4
-
4
-
-
84902664436
-
The false classification of extinction risk in noisy environments
-
Connors, B., A. Cooper, R. Peterman, and N. Dulvy. 2014. The false classification of extinction risk in noisy environments. Proceedings of the Royal Society B 281:20132935.
-
(2014)
Proceedings of the Royal Society B
, vol.281
, pp. 20132935
-
-
Connors, B.1
Cooper, A.2
Peterman, R.3
Dulvy, N.4
-
5
-
-
79959363638
-
Models for estimating abundance from repeated counts of an open metapopulation
-
Dail, D., and L. Madsen. 2011. Models for estimating abundance from repeated counts of an open metapopulation. Biometrics 67:577-587.
-
(2011)
Biometrics
, vol.67
, pp. 577-587
-
-
Dail, D.1
Madsen, L.2
-
6
-
-
0036492258
-
Review of methods for fitting time-series models with process and observation error and likelihood calculations for nonlinear, non-Gaussian state-space models
-
De Valpine, P. 2002. Review of methods for fitting time-series models with process and observation error and likelihood calculations for nonlinear, non-Gaussian state-space models. Bulletin of Marine Science 70:455-471.
-
(2002)
Bulletin of Marine Science
, vol.70
, pp. 455-471
-
-
De Valpine, P.1
-
7
-
-
84859266542
-
Frequentist analysis of hierarchical models for population dynamics and demographic data
-
De Valpine, P. 2012. Frequentist analysis of hierarchical models for population dynamics and demographic data. Journal of Ornithology 152:393-408.
-
(2012)
Journal of Ornithology
, vol.152
, pp. 393-408
-
-
De Valpine, P.1
-
8
-
-
0036160013
-
Fitting population models incorporating process noise and observation error
-
De Valpine, P., and A. Hastings. 2002. Fitting population models incorporating process noise and observation error. Ecological Monographs 72:57-76.
-
(2002)
Ecological Monographs
, vol.72
, pp. 57-76
-
-
De Valpine, P.1
Hastings, A.2
-
10
-
-
0026015808
-
Estimation of growth and extinction parameters for endangered species
-
Dennis, B., P. L. Munholland, and J. M. Scott. 1991. Estimation of growth and extinction parameters for endangered species. Ecological Monographs 61:115-143.
-
(1991)
Ecological Monographs
, vol.61
, pp. 115-143
-
-
Dennis, B.1
Munholland, P.L.2
Scott, J.M.3
-
11
-
-
33747072045
-
Estimating density dependence, process noise, and observation error
-
Dennis, B., J. M. Ponciano, S. R. Lele, M. L. Taper, and D. F. Staples. 2006. Estimating density dependence, process noise, and observation error. Ecological Monographs 76:323-341.
-
(2006)
Ecological Monographs
, vol.76
, pp. 323-341
-
-
Dennis, B.1
Ponciano, J.M.2
Lele, S.R.3
Taper, M.L.4
Staples, D.F.5
-
12
-
-
77949300708
-
Replicated sampling increases efficiency in monitoring biological populations
-
Dennis, B., J. M. Ponciano, and M. L. Taper. 2010. Replicated sampling increases efficiency in monitoring biological populations. Ecology 91:610-620.
-
(2010)
Ecology
, vol.91
, pp. 610-620
-
-
Dennis, B.1
Ponciano, J.M.2
Taper, M.L.3
-
13
-
-
47249139490
-
Commentary on Holmes et al. (2007): Resolving the debate on when extinction risk is predictable
-
Ellner, S., and E. Holmes. 2008. Commentary on Holmes et al. (2007): resolving the debate on when extinction risk is predictable. Ecology Letters 11(8):E1-E5.
-
(2008)
Ecology Letters
, vol.11
, Issue.8
, pp. E1-E5
-
-
Ellner, S.1
Holmes, E.2
-
14
-
-
0033941514
-
When is it meaningful to estimate an extinction probability?
-
Fieberg, J., and S. P. Ellner. 2000. When is it meaningful to estimate an extinction probability? Ecology 81:2040-2047.
-
(2000)
Ecology
, vol.81
, pp. 2040-2047
-
-
Fieberg, J.1
Ellner, S.P.2
-
15
-
-
85027939832
-
Fitting population growth models in the presence of measurement and detection error
-
Hefley, T. J., A. J. Tyre, and E. E. Blankenship. 2013a. Fitting population growth models in the presence of measurement and detection error. Ecological Modelling 263:244-250.
-
(2013)
Ecological Modelling
, vol.263
, pp. 244-250
-
-
Hefley, T.J.1
Tyre, A.J.2
Blankenship, E.E.3
-
16
-
-
84880703423
-
Statistical indicators and state-space population models predict extinction in a population of bobwhite quail
-
Hefley, T. J., A. J. Tyre, and E. E. Blankenship. 2013b. Statistical indicators and state-space population models predict extinction in a population of bobwhite quail. Theoretical Ecology 6:319-331.
-
(2013)
Theoretical Ecology
, vol.6
, pp. 319-331
-
-
Hefley, T.J.1
Tyre, A.J.2
Blankenship, E.E.3
-
17
-
-
63549147285
-
Population viability analysis for several populations using multivariate state-space models
-
Hinrichsen, R. A. 2009. Population viability analysis for several populations using multivariate state-space models. Ecological Modelling 220:1197-1202.
-
(2009)
Ecological Modelling
, vol.220
, pp. 1197-1202
-
-
Hinrichsen, R.A.1
-
18
-
-
77949306836
-
Using multivariate state-space models to study spatial structure and dynamics
-
S. Cantrell, C. Cosner, and S. Ruan, editors Chapman and Hall/CRC, Boca Raton, Florida, USA
-
Hinrichsen, R. A., and E. E. Holmes. 2010. Using multivariate state-space models to study spatial structure and dynamics. Pages 145-166 in S. Cantrell, C. Cosner, and S. Ruan, editors. Spatial ecology. Chapman and Hall/CRC, Boca Raton, Florida, USA.
-
(2010)
Spatial Ecology
, pp. 145-166
-
-
Hinrichsen, R.A.1
Holmes, E.E.2
-
20
-
-
4444229220
-
Beyond theory to application and evaluation: Diffusion approximations for population viability analysis
-
Holmes, E. E. 2004. Beyond theory to application and evaluation: diffusion approximations for population viability analysis. Ecological Applications 14:1272-1293.
-
(2004)
Ecological Applications
, vol.14
, pp. 1272-1293
-
-
Holmes, E.E.1
-
21
-
-
33644939445
-
Cross validation of quasi-extinction risks from real time series: An examination of diffusion approximation methods
-
U.S. Department of Commerce
-
Holmes, E. E., W. F. Fagan, J. J. Rango, J. A. Folarin, J. A. Sorensen, J. E. Lippe, and N. E. McIntyre. 2005. Cross validation of quasi-extinction risks from real time series: An examination of diffusion approximation methods. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-67.
-
(2005)
NOAA Technical Memorandum NMFS-NWFSC-67
-
-
Holmes, E.E.1
Fagan, W.F.2
Rango, J.J.3
Folarin, J.A.4
Sorensen, J.A.5
Lippe, J.E.6
McIntyre, N.E.7
-
22
-
-
35848962946
-
A statistical approach to quasi-extinction forecasting
-
Holmes, E. E., J. L. Sabo, S. V. Viscido, and W. F. Fagan. 2007. A statistical approach to quasi-extinction forecasting. Ecology Letters 10:1182-1198.
-
(2007)
Ecology Letters
, vol.10
, pp. 1182-1198
-
-
Holmes, E.E.1
Sabo, J.L.2
Viscido, S.V.3
Fagan, W.F.4
-
23
-
-
32144464398
-
Population viability analysis for metapopulations: A diffusion approximation approach
-
I. Hanski and O. Gaggiotti, editors Elsevier Academic Press, Amsterdam, The Netherlands
-
Holmes, E. E., and B. Semmens. 2004. Population viability analysis for metapopulations: a diffusion approximation approach. Pages 565-597 in I. Hanski and O. Gaggiotti, editors. Ecology, genetics, and evolution of metapopulations. Elsevier Academic Press, Amsterdam, The Netherlands.
-
(2004)
Ecology, Genetics, and Evolution of Metapopulations
, pp. 565-597
-
-
Holmes, E.E.1
Semmens, B.2
-
24
-
-
84930014387
-
-
Version 3.9 edition. NOAA Fisheries, Northwest Fisheries Science Center, Seattle, Washington, USA
-
Holmes, E. E., E. J. Ward, and M. Scheuerell. 2014. Analysis of multivariate time-series using the MARSS package. Version 3.9 edition. NOAA Fisheries, Northwest Fisheries Science Center, Seattle, Washington, USA. http://cran.r-project.org/web/packages/MARSS/
-
(2014)
Analysis of Multivariate Time-Series Using the MARSS Package
-
-
Holmes, E.E.1
Ward, E.J.2
Scheuerell, M.3
-
25
-
-
71049183468
-
A better way to estimate population trends
-
Humbert, J. Y., L. S. Mills, J. S. Horne, and B. Dennis. 2009. A better way to estimate population trends. Oikos 118:1940-1946.
-
(2009)
Oikos
, vol.118
, pp. 1940-1946
-
-
Humbert, J.Y.1
Mills, L.S.2
Horne, J.S.3
Dennis, B.4
-
26
-
-
84884719480
-
-
Version 11. International Union for Conservation of Nature, Gland, Switzerland
-
IUCN Standards and Petitions Subcommittee. 2014. Guidelines for using the IUCN red list categories and criteria. Version 11. International Union for Conservation of Nature, Gland, Switzerland. http://www.iucnredlist.org/documents/RedListGuidelines.pdf
-
(2014)
Guidelines for Using the IUCN Red List Categories and Criteria
-
-
-
27
-
-
0038613595
-
Estimating community stability and ecological interactions from time-series data
-
Ives, A. R., B. Dennis, K. L. Cottingham, and S. R. Carpenter. 2003. Estimating community stability and ecological interactions from time-series data. Ecological Monographs 73:301-330.
-
(2003)
Ecological Monographs
, vol.73
, pp. 301-330
-
-
Ives, A.R.1
Dennis, B.2
Cottingham, K.L.3
Carpenter, S.R.4
-
29
-
-
72849140699
-
Trend estimation in populations with imperfect detection
-
Kery, M., R. M. Dorazio, L. Soldaat, A. van Strien, A. Zuiderwijk, and J. A. Royle. 2009. Trend estimation in populations with imperfect detection. Journal of Applied Ecology 46:1163-1172.
-
(2009)
Journal of Applied Ecology
, vol.46
, pp. 1163-1172
-
-
Kery, M.1
Dorazio, R.M.2
Soldaat, L.3
Van Strien, A.4
Zuiderwijk, A.5
Royle, J.A.6
-
30
-
-
63849211706
-
Estimability of density dependence in models of time series data
-
Knape, J. 2008. Estimability of density dependence in models of time series data. Ecology 89:2994-3000.
-
(2008)
Ecology
, vol.89
, pp. 2994-3000
-
-
Knape, J.1
-
31
-
-
84884898399
-
Using uncertainty estimates in analyses of population time series
-
Knape, J., P. Besbeas, and P. de Valpine. 2013. Using uncertainty estimates in analyses of population time series. Ecology 94:2097-2107.
-
(2013)
Ecology
, vol.94
, pp. 2097-2107
-
-
Knape, J.1
Besbeas, P.2
De Valpine, P.3
-
32
-
-
82455187946
-
Are patterns of density dependence in the global population dynamics database driven by uncertainty about population abundance?
-
Knape, J., and P. de Valpine. 2011. Are patterns of density dependence in the global population dynamics database driven by uncertainty about population abundance? Ecology Letters 14:17-23.
-
(2011)
Ecology Letters
, vol.14
, pp. 17-23
-
-
Knape, J.1
De Valpine, P.2
-
33
-
-
0004304647
-
-
Oxford University Press, Oxford, UK
-
Lande, R., S. Engen, and B.-E. Sæther. 2003. Stochastic population dynamics in ecology and conservation. Oxford University Press, Oxford, UK.
-
(2003)
Stochastic Population Dynamics in Ecology and Conservation
-
-
Lande, R.1
Engen, S.2
Sæther, B.-E.3
-
34
-
-
84930012126
-
Status updates for Yellowstone cutthroat trout, redband trout, and bull trout in Idaho
-
Idaho Department of Fish and Game, Boise, Idaho, USA
-
Larson, E. I., B. High, and C. L. Sullivan. 2013. Status updates for Yellowstone cutthroat trout, redband trout, and bull trout in Idaho. Technical Report Number 13-18, Idaho Department of Fish and Game, Boise, Idaho, USA. https://collaboration.idfg.idaho.gov/FisheriesTechnicalReports/Res13-18Meyer2014%20salmonid%20status%20report.pdf
-
(2013)
Technical Report Number 13-18
-
-
Larson, E.I.1
High, B.2
Sullivan, C.L.3
-
35
-
-
34249822549
-
Data cloning: Easy maximum likelihood estimation for complex ecological models using Bayesian Markov chain Monte Carlo methods
-
Lele, S. R., B. Dennis, and F. Lutscher. 2007. Data cloning: easy maximum likelihood estimation for complex ecological models using Bayesian Markov chain Monte Carlo methods. Ecology Letters 10:551-563.
-
(2007)
Ecology Letters
, vol.10
, pp. 551-563
-
-
Lele, S.R.1
Dennis, B.2
Lutscher, F.3
-
36
-
-
0346991699
-
Estimation of population growth and extinction parameters from noisy data
-
Lindley, S. T. 2003. Estimation of population growth and extinction parameters from noisy data. Ecological Applications 13:806-813.
-
(2003)
Ecological Applications
, vol.13
, pp. 806-813
-
-
Lindley, S.T.1
-
37
-
-
0032960742
-
Bayesian stock assessment using a state-space implementation of the delay difference model
-
Meyer, R., and R. B. Millar. 1999. Bayesian stock assessment using a state-space implementation of the delay difference model. Canadian Journal of Fisheries and Aquatic Sciences 56:37-52.
-
(1999)
Canadian Journal of Fisheries and Aquatic Sciences
, vol.56
, pp. 37-52
-
-
Meyer, R.1
Millar, R.B.2
-
38
-
-
0034110745
-
Bayesian state-space modeling of age-structured data: Fitting a model is just the beginning
-
Millar, R. B., and R. Meyer. 2000. Bayesian state-space modeling of age-structured data: fitting a model is just the beginning. Canadian Journal of Fisheries and Aquatic Sciences 57:43-50.
-
(2000)
Canadian Journal of Fisheries and Aquatic Sciences
, vol.57
, pp. 43-50
-
-
Millar, R.B.1
Meyer, R.2
-
39
-
-
84866144669
-
Likelihood based population viability analysis in the presence of observation error
-
Nadeem, K., and S. R. Lele. 2012. Likelihood based population viability analysis in the presence of observation error. Oikos 121:1656-1664.
-
(2012)
Oikos
, vol.121
, pp. 1656-1664
-
-
Nadeem, K.1
Lele, S.R.2
-
41
-
-
33645103546
-
Hidden process models for animal population dynamics
-
Newman, K. B., S. T. Buckland, S. T. Lindley, L. Thomas, and C. Fernandez. 2006. Hidden process models for animal population dynamics. Ecological Applications 16:74-86.
-
(2006)
Ecological Applications
, vol.16
, pp. 74-86
-
-
Newman, K.B.1
Buckland, S.T.2
Lindley, S.T.3
Thomas, L.4
Fernandez, C.5
-
42
-
-
78649994819
-
Impact of density and environmental factors on population fluctuations in a migratory passerine
-
Pasinelli, G., M. Schaub, G. Häfliger, M. Frey, H. Jakober, M. Muäller, W. Stauber, P. Tryjanowski, J.-L. Zollinger, and L. Jenni. 2011. Impact of density and environmental factors on population fluctuations in a migratory passerine. Journal of Animal Ecology 80:225-234.
-
(2011)
Journal of Animal Ecology
, vol.80
, pp. 225-234
-
-
Pasinelli, G.1
Schaub, M.2
Häfliger, G.3
Frey, M.4
Jakober, H.5
Muäller, M.6
Stauber, W.7
Tryjanowski, P.8
Zollinger, J.-L.9
Jenni, L.10
-
43
-
-
84863304598
-
-
R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team. 2009. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2009)
R: A Language and Environment for Statistical Computing
-
-
-
44
-
-
84894320317
-
Evaluating a fish monitoring protocol using state-space hierarchical models
-
Russell, R. E., D. A. Schmetterling, C. S. Guy, B. B. Shepard, R. McFarland, and D. Skaar. 2012. Evaluating a fish monitoring protocol using state-space hierarchical models. Open Fish Science Journal 5:1-8.
-
(2012)
Open Fish Science Journal
, vol.5
, pp. 1-8
-
-
Russell, R.E.1
Schmetterling, D.A.2
Guy, C.S.3
Shepard, B.B.4
McFarland, R.5
Skaar, D.6
-
45
-
-
34848909387
-
Predicting extinction risk in spite of predator-prey oscillations
-
Sabo, J. L., and L. R. Gerber. 2007. Predicting extinction risk in spite of predator-prey oscillations. Ecological Applications 17:1543-1554.
-
(2007)
Ecological Applications
, vol.17
, pp. 1543-1554
-
-
Sabo, J.L.1
Gerber, L.R.2
-
46
-
-
1542319725
-
Efficacy of simple viability models in ecological risk assessment: Does density dependence matter?
-
Sabo, J. L., E. E. Holmes, and P. Kareiva. 2004. Efficacy of simple viability models in ecological risk assessment: Does density dependence matter? Ecology 85:328-341.
-
(2004)
Ecology
, vol.85
, pp. 328-341
-
-
Sabo, J.L.1
Holmes, E.E.2
Kareiva, P.3
-
47
-
-
0141976879
-
Using population viability analysis to develop recovery criteria for endangered insects: Case study of the Fender's blue butterfly
-
Schultz, C. B., and P. C. Hammond. 2003. Using population viability analysis to develop recovery criteria for endangered insects: case study of the Fender's blue butterfly. Conservation Biology 17:1372-1385.
-
(2003)
Conservation Biology
, vol.17
, pp. 1372-1385
-
-
Schultz, C.B.1
Hammond, P.C.2
-
48
-
-
65349096159
-
Application of diffusion approximation for risk assessments of sea turtle populations
-
Snover, M. L., and S. S. Heppell. 2009. Application of diffusion approximation for risk assessments of sea turtle populations. Ecological Applications 19:774-785.
-
(2009)
Ecological Applications
, vol.19
, pp. 774-785
-
-
Snover, M.L.1
Heppell, S.S.2
-
49
-
-
84857794462
-
Conditional likelihood approach for analyzing single visit abundance survey data in the presence of zero inflation and detection error
-
Sólymos, P., S. Lele, and E. Bayne. 2012. Conditional likelihood approach for analyzing single visit abundance survey data in the presence of zero inflation and detection error. Environmetrics 23(2):197-205.
-
(2012)
Environmetrics
, vol.23
, Issue.2
, pp. 197-205
-
-
Sólymos, P.1
Lele, S.2
Bayne, E.3
-
50
-
-
8144219862
-
Estimating population trend and process variation for PVA in the presence of sampling error
-
Staples, D. F., M. L. Taper, and B. Dennis. 2004. Estimating population trend and process variation for PVA in the presence of sampling error. Ecology 85:923-929.
-
(2004)
Ecology
, vol.85
, pp. 923-929
-
-
Staples, D.F.1
Taper, M.L.2
Dennis, B.3
-
51
-
-
1342289305
-
Population dynamics across geographical ranges: Time-series analyses of three small game species
-
Williams, C. K., A. R. Ives, and R. D. Applegate. 2003. Population dynamics across geographical ranges: time-series analyses of three small game species. Ecology 84:2654-2667.
-
(2003)
Ecology
, vol.84
, pp. 2654-2667
-
-
Williams, C.K.1
Ives, A.R.2
Applegate, R.D.3
-
52
-
-
79960557286
-
Analyzing variability and the rate of decline of migratory shorebirds in Moreton Bay, Australia
-
Wilson, H. B., B. E. Kendall, R. A. Fuller, D. A. Milton, and H. P. Possingham. 2011. Analyzing variability and the rate of decline of migratory shorebirds in Moreton Bay, Australia. Conservation Biology 25:758-766.
-
(2011)
Conservation Biology
, vol.25
, pp. 758-766
-
-
Wilson, H.B.1
Kendall, B.E.2
Fuller, R.A.3
Milton, D.A.4
Possingham, H.P.5
|