Liposomes for DNA nanotechnology: Preparation, properties, and applications

DNA Nanotechnology: From Structure to Function

Volumn 9783642360770, Issue , 2013, Pages 57-76

  Dave, Neeshma ^a   Liu, Juewen ^a  

^a UNIVERSITY OF WATERLOO   (Canada)

Author keywords

Aptamers; Biosensors; DNA; Liposomes; Nanoparticles

Indexed keywords

BIOSENSORS; DNA; DRUG DELIVERY; NANOMAGNETICS; NANOPARTICLES;

APTAMERS; CATALYTIC PROPERTIES; DNA NANOTECHNOLOGY; ELECTRIC-MAGNETIC PROPERTIES; INORGANIC NANOPARTICLE; MOLECULAR RECOGNITION FUNCTIONS; NANOPARTICLE LIPOSOMES; OPTICAL-; PROPERTY; SOFT MATTER;

LIPOSOMES;

EID: 84929873788     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-642-36077-0_4     Document Type: Chapter

References (66)

1. Seeman NC (2003) DNA in a material world. Nature 421:427-431
2. Pinheiro AV, Han D, Shih WM, Yan H (2011) Challenges and opportunities for structural DNA nanotechnology. Nat Nanotechnol 6:763-772
3. Wilson DS, Szostak JW (1999) In vitro selection of functional nucleic acids. Annu Rev Biochem 68:611-647
4. Rosi NL, Mirkin CA (2005) Nanostructures in biodiagnostics. Chem Rev 105:1547-1562
5. Katz E, Willner I (2004) Nanobiotechnology: integrated nanoparticle-biomolecule hybrid systems: synthesis, properties, and applications. Angew Chem Int Ed 43:6042-6108
6. Liu J, Cao Z, Lu Y (2009) Functional nucleic acid sensors. Chem Rev 109:1948-1998
7. Wang H, Yang RH, Yang L, Tan WH (2009) Nucleic acid conjugated nanomaterials for enhanced molecular recognition. ACS Nano 3:2451-2460
8. Li D, Song SP, Fan CH (2010) Target-responsive structural switching for nucleic acid-based sensors. Acc Chem Res 43:631-641
9. De Lima MCP, Simoes S, Pires P, Faneca H, Duzgunes N (2001) Cationic lipid-DNA complexes in gene delivery: from biophysics to biological applications. Adv Drug Deliv Rev 47:277-294
10. Chesnoy S, Huang L (2000) Structure and function of lipid-DNA complexes for gene delivery. Annu Rev Biophys Biomol Struct 29:27-47
11. Bangham AD, Standish MM, Watkins JC (1965) Diffusion of univalent ions across lamellae of swollen phospholipids. J Mol Biol 13:238-252
12. Jesorka A, Orwar O (2008) Liposomes: technologies and analytical applications. Annu Rev Anal Chem 1:801-832
13. Shimomura M, Sawadaishi T (2001) Bottom-up strategy of materials fabrication: a new trend in nanotechnology of soft materials. Curr Opin Colloid Interface Sci 6:11-16
14. Oldfield E, Chapman D (1972) Dynamics of lipids in membranes - heterogeneity and role of cholesterol. FEBS Lett 23:285-297
15. Ohvo-Rekila H, Ramstedt B, Leppimaki P, Slotte JP (2002) Cholesterol interactions with phospholipids in membranes. Prog Lipid Res 41:66-97
16. Martin R, Yeagle P (1978) Models for lipid organization in cholesterol-phospholipid bilayers including cholesterol dimer formation. Lipids 13:594-597
17. Szoka F, Papahadjopoulos D (1980) Comparative properties and methods of preparation of lipid vesicles (liposomes). Annu Rev Biophys Bioeng 9:467-508
18. Veatch SL, Keller SL (2003) Separation of liquid phases in giant vesicles of ternary mixtures of phospholipids and cholesterol. Biophys J 85:3074-3083
19. Hope MJ, Bally MB, Mayer LD, Janoff AS, Cullis PR (1986) Generation of multilamellar and unilamellar phospholipid-vesicles. Chem Phys Lipids 40:89-107
20. Huang CH (1969) Studies on phosphatidylcholine vesicles. Formation and physical characteristics. Biochemistry 8:344-352
21. Szoka F, Papahadjopoulos D (1978) Procedure for preparation of liposomes with large internal aqueous space and high capture by reverse-phase evaporation. Proc Natl Acad Sci USA 75:4194-4198
22. Angelova MI, Soleau S, Meleard P, Faucon JF, Bothorel P (1992) Preparation of giant vesicles by external ac electric-fields - kinetics and applications. Prog Colloid Polym Sci 89:127-131
23. Morales-Penningston NF, Wu J, Farkas ER, Goh SL, Konyakhina TM, Zheng JY, Webb WW, Feigenson GW (2010) Guv preparation and imaging: minimizing artifacts. Biochim Biophys Acta-Biomembr 1798:1324-1332
24. Svedhem S, Pfeiffer I, Larsson C, Wingren C, Borrebaeck C, Höök F (2003) Patterns of DNAlabeled and scfv-antibody-carrying lipid vesicles directed by material-specific immobilization of DNA and supported lipid bilayer formation on an Au/SiO2 template. Chembiochem 4:339-343
25. Kessel A, Ben-Tal N, May S (2001) Interactions of cholesterol with lipid bilayers: the preferred configuration and fluctuations. Biophys J 81:643-658
26. Beales PA, Vanderlick TK (2007) Specific binding of different vesicle populations by the hybridization of membrane-anchored DNA. J Phys Chem A 111:12372-12380
27. Pfeiffer I, Hook F (2004) Bivalent cholesterol-based coupling of oligonucleotides to lipid membrane assemblies. J Am Chem Soc 126:10224-10225
28. Mammen M, Choi SK, Whitesides GM (1998) Polyvalent interactions in biological systems: implications for design and use of multivalent ligands and inhibitors. Angew Chem Int Ed 37:2755-2794
29. Banchelli M, Betti F, Berti D, Caminati G, Bombelli FB, Brown T, Wilhelmsson LM, Norden B, Baglioni P (2008) Phospholipid membranes decorated by cholesterol-based oligonucleotides as soft hybrid nanostructures. J Phys Chem B 112:10942-10952
30. Beales PA, Vanderlick TK (2009) Partitioning of membrane-anchored DNA between coexisting lipid phases. J Phys Chem B 113:13678-13686
31. Bunge A, Loew M, Pescador P, Arbuzova A, Brodersen N, Kang J, Dàihne L, Liebscher J, Herrmann A, Stengel G, Huster D (2009) Lipid membranes carrying lipophilic cholesterolbased oligonucleotides - characterization and application on layer-by-layer coated particles. J Phys Chem B 113:16425-16434
32. Chan YHM, Van Lengerich B, Boxer SG (2008) Lipid-anchored DNA mediates vesicle fusion as observed by lipid and content mixing. Biointerphases 3: FA17-FA21
33. Chan YHM, Van Lengerich B, Boxer SG (2009) Effects of linker sequences on vesicle fusion mediated by lipid-anchored DNA oligonucleotides. Proc Natl Acad Sci USA 106:979-984
34. Jakobsen U, Simonsen AC, Vogel S (2008) DNA-controlled assembly of soft nanoparticles. J Am Chem Soc 130:10462-10463
35. Patolsky F, Lichtenstein A, Willner I (1999) Amplified microgravimetric quartz-crystalmicrobalance assay of DNA using oligonucleotide-functionalized liposomes or biotinylated liposomes. J Am Chem Soc 122:418-419
36. Dave N, Liu J (2011) Programmable assembly of DNA-functionalized liposomes by DNA. ACS Nano 5:1304-1312
37. Yoshina-Ishii C, Boxer SG (2003) Arrays of mobile tethered vesicles on supported lipid bilayers. J Am Chem Soc 125:3696-3697
38. Hurst SJ, Hill HD, Mirkin CA (2008) "Three-dimensional hybridization" with polyvalent DNA-gold nanoparticle conjugates. J Am Chem Soc 130:12192-12200
39. Mirkin CA, Letsinger RL, Mucic RC, Storhoff JJ (1996) A DNA-based method for rationally assembling nanoparticles into macroscopic materials. Nature 382:607-609
40. Jin R, Wu G, Li Z, Mirkin CA, Schatz GC (2003) What controls the melting properties of DNA-linked gold nanoparticle assemblies? J Am Chem Soc 125:1643-1654
41. Yoshina-Ishii C, Miller GP, Kraft ML, Kool ET, Boxer SG (2005) General method for modification of liposomes for encoded assembly on supported bilayers. J Am Chem Soc 127:1356-1357
42. Chiruvolu S, Walker S, Israelachvili J, Schmitt F-J, Leckband D, Zasadzinski JA (1994) Higher order self-assembly of vesicles by site-specific binding. Science 264:1753-1756
43. Mart RJ, Liem KP, Wang X, Webb SJ (2006) The effect of receptor clustering on vesicle-vesicle adhesion. J Am Chem Soc 128:14462-14463
44. Paleos CM, Tsiourvas D (2003) Molecular recognition and hydrogen-bonded amphiphiles. Top Curr Chem 227:1-29
45. Menger FM, Zhang H (2006) Self-adhesion among phospholipid vesicles. J Am Chem Soc 128:1414-1415
46. 2+ ion. Langmuir 19:7676-7678
47. Hadorn M, Eggenberger Hotz P (2010) DNA-mediated self-assembly of artificial vesicles. PLoS One 5:e9886
48. Dave N, Liu J (2011) Protection and promotion of UV radiation-induced liposome leakage via DNA-directed assembly with gold nanoparticles. Adv Mater 23:3182-3186
49. Troutman TS, Barton JK, Romanowski M (2008) Biodegradable plasmon resonant nanoshells. Adv Mater 20:2604-2608
50. Troutman TS, Leung SJ, Romanowski M (2009) Light-induced content release from plasmonresonant liposomes. Adv Mater 21:2334-2338
51. Jin YD, Gao XH (2009) Spectrally tunable leakage-free gold nanocontainers. J Am Chem Soc 131:17774-17776
52. Paasonen L, Sipila T, Subrizi A, Laurinmaki P, Butcher SJ, Rappolt M, Yaghmur A, Urtti A, Yliperttula M (2010) Gold-embedded photosensitive liposomes for drug delivery: triggering mechanism and intracellular release. J Control Release 147:136-143
53. Pobbati AV, Stein A, Fasshauer D (2006) N-to c-terminal snare complex assembly promotes rapid membrane fusion. Science 313:673-676
54. Stengel G, Zahn R, Hook F (2007) DNA-induced programmable fusion of phospholipid vesicles. J Am Chem Soc 129:9584-9585
55. Stengel G, Simonsson L, Campbell RA, Hook F (2008) Determinants for membrane fusion induced by cholesterol-modified DNA zippers. J Phys Chem B 112:8264-8274
56. Edwards KA, Baeumner AJ (2006) Optimization of DNA-tagged dye-encapsulating liposomes for lateral-flow assays based on sandwich hybridization. Anal Bioanal Chem 386:1335-1343
57. Edwards KA, Baeumner AJ (2006) Optimization of DNA-tagged liposomes for use in microtiter plate analyses. Anal Bioanal Chem 386:1613-1623
58. Edwards KA, Wang Y, Baeumner AJ (2010) Aptamer sandwich assays: human alpha-thrombin detection using liposome enhancement. Anal Bioanal Chem 398:2645-2654
59. Pack DW, Ng K, Maloney KM, Arnold FH (1997) Ligand-induced reorganization and assembly in synthetic lipid membranes. Supramol Sci 4:3-10
60. Periole X, Huber T, Marrink SJ, Sakmar TP (2007) G protein-coupled receptors self-assemble in dynamics simulations of model bilayers. J Am Chem Soc 129:10126-10132
61. Dave N, Liu J (2012) Biomimetic sensing based on chemically induced assembly of a signaling DNA aptamer on a fluid bilayer membrane. Chem Commun 48:3718-3720
62. Keefe AD, Pai S, Ellington A (2010) Aptamers as therapeutics. Nat Rev Drug Discov 9:537-550
63. Famulok M, Hartig JS, Mayer G (2007) Functional aptamers and aptazymes in biotechnology, diagnostics, and therapy. Chem Rev 107:3715-3743
64. Cao ZH, Tong R, Mishra A, Xu WC, Wong GCL, Cheng JJ, Lu Y (2009) Reversible cell-specific drug delivery with aptamer-functionalized liposomes. Angew Chem Int Ed 48:6494-6498
65. Kang H, O'Donoghue MB, Liu H, Tan W (2010) A liposome-based nanostructure for aptamer directed delivery. Chem Commun 46:249-251
66. Mann AP, Bhavane RC, Somasunderam A, Montalvo-Ortiz BL, Ghaghada KB, Volk D, Nieves-Alicea R, Suh KS, Ferrari M, Annapragada A, Gorenstein DG, Tanaka T (2011) Thioaptamer conjugated liposomes for tumor vasculature targeting. Oncotarget 2:298-304