메뉴 건너뛰기




Volumn 4, Issue , 2015, Pages 92-106

Structural and functional analyses of Barth syndrome-causing mutations and alternative splicing in the tafazzin acyltransferase domain

Author keywords

Disease causing mutations; Homology modeling; Immunodeficiency; Intrinsically unstructured region; TAZ gene; X linked recessive disease

Indexed keywords

DNA HOMOLOG; GLYCEROL 3 PHOSPHATE ACYLTRANSFERASE; MEMBRANE PROTEIN; PHOSPHATIDYLCHOLINE STEROL ACYLTRANSFERASE;

EID: 84929377608     PISSN: 22145400     EISSN: 22145400     Source Type: Journal    
DOI: 10.1016/j.mgene.2015.04.001     Document Type: Article
Times cited : (16)

References (43)
  • 1
    • 33845752499 scopus 로고    scopus 로고
    • Comparison of lymphoblast mitochondria from normal subjects and patients with Barth syndrome using electron microscopic tomography
    • Acehan D., Xu Y., Stokes D.L., Schlame M. Comparison of lymphoblast mitochondria from normal subjects and patients with Barth syndrome using electron microscopic tomography. Lab. Investig. 2007, 87:40-48.
    • (2007) Lab. Investig. , vol.87 , pp. 40-48
    • Acehan, D.1    Xu, Y.2    Stokes, D.L.3    Schlame, M.4
  • 3
    • 0035812694 scopus 로고    scopus 로고
    • Protein structure prediction and structural genomics
    • Baker D., Sali A. Protein structure prediction and structural genomics. Science 2001, 294:93-96.
    • (2001) Science , vol.294 , pp. 93-96
    • Baker, D.1    Sali, A.2
  • 7
    • 27644437287 scopus 로고    scopus 로고
    • Taz1, an outer mitochondrial membrane protein, affects stability and assembly of inner membrane protein complexes: implications for Barth Syndrome
    • Brandner K., Mick D.U., Frazier A.E., Taylor R.D., Meisinger C., Rehling P. Taz1, an outer mitochondrial membrane protein, affects stability and assembly of inner membrane protein complexes: implications for Barth Syndrome. Mol. Biol. Cell 2005, 16:5202-5214.
    • (2005) Mol. Biol. Cell , vol.16 , pp. 5202-5214
    • Brandner, K.1    Mick, D.U.2    Frazier, A.E.3    Taylor, R.D.4    Meisinger, C.5    Rehling, P.6
  • 8
    • 0022706389 scopus 로고
    • The relation between the divergence of sequence and structure in proteins
    • Chothia C., Lesk A.M. The relation between the divergence of sequence and structure in proteins. EMBO J. 1986, 5:823-826.
    • (1986) EMBO J. , vol.5 , pp. 823-826
    • Chothia, C.1    Lesk, A.M.2
  • 9
    • 33746606474 scopus 로고    scopus 로고
    • Mitochondrial mislocalization and altered assembly of a cluster of Barth syndrome mutant tafazzins
    • Claypool S.M., McCaffery J.M., Koehler C.M. Mitochondrial mislocalization and altered assembly of a cluster of Barth syndrome mutant tafazzins. J. Cell Biol. 2006, 174:379-390.
    • (2006) J. Cell Biol. , vol.174 , pp. 379-390
    • Claypool, S.M.1    McCaffery, J.M.2    Koehler, C.M.3
  • 11
    • 0027485083 scopus 로고
    • Comparison of conformational characteristics in structurally similar protein pairs
    • Flores T.P., Orengo C.A., Moss D.S., Thornton J.M. Comparison of conformational characteristics in structurally similar protein pairs. Protein Sci. 1993, 2:1811-1826.
    • (1993) Protein Sci. , vol.2 , pp. 1811-1826
    • Flores, T.P.1    Orengo, C.A.2    Moss, D.S.3    Thornton, J.M.4
  • 12
    • 47249161216 scopus 로고    scopus 로고
    • Enzymes without borders: mobilizing substrates, delivering products
    • Forneris F., Mattevi A. Enzymes without borders: mobilizing substrates, delivering products. Science 2008, 321:213-216.
    • (2008) Science , vol.321 , pp. 213-216
    • Forneris, F.1    Mattevi, A.2
  • 13
    • 84855290528 scopus 로고    scopus 로고
    • Divergence and convergence in enzyme evolution
    • Galperin M.Y., Koonin E.V. Divergence and convergence in enzyme evolution. J. Biol. Chem. 2012, 287:21-28.
    • (2012) J. Biol. Chem. , vol.287 , pp. 21-28
    • Galperin, M.Y.1    Koonin, E.V.2
  • 14
    • 0019860994 scopus 로고
    • Correlation of DNA exonic regions with protein structural units in haemoglobin
    • Go M. Correlation of DNA exonic regions with protein structural units in haemoglobin. Nature 1981, 291:90-92.
    • (1981) Nature , vol.291 , pp. 90-92
    • Go, M.1
  • 15
    • 0020972782 scopus 로고
    • Theoretical studies of protein folding
    • Go N. Theoretical studies of protein folding. Annu. Rev. Biophys. Bioeng. 1983, 12:183-210.
    • (1983) Annu. Rev. Biophys. Bioeng. , vol.12 , pp. 183-210
    • Go, N.1
  • 16
    • 0018987862 scopus 로고
    • Relationship between mutability, polarity and exteriority of amino acid residues in protein evolution
    • Go M., Miyazawa S. Relationship between mutability, polarity and exteriority of amino acid residues in protein evolution. Int. J. Pept. Protein Res. 1980, 15:211-224.
    • (1980) Int. J. Pept. Protein Res. , vol.15 , pp. 211-224
    • Go, M.1    Miyazawa, S.2
  • 17
    • 18044371879 scopus 로고    scopus 로고
    • Barth syndrome: TAZ gene mutations, mRNAs, and evolution
    • Gonzalez I.L. Barth syndrome: TAZ gene mutations, mRNAs, and evolution. Am. J. Med. Genet. A 2005, 134:409-414.
    • (2005) Am. J. Med. Genet. A , vol.134 , pp. 409-414
    • Gonzalez, I.L.1
  • 19
    • 0031941001 scopus 로고    scopus 로고
    • A conserved histidine is essential for glycerolipid acyltransferase catalysis
    • Heath R.J., Rock C.O. A conserved histidine is essential for glycerolipid acyltransferase catalysis. J. Bacteriol. 1998, 180:1425-1430.
    • (1998) J. Bacteriol. , vol.180 , pp. 1425-1430
    • Heath, R.J.1    Rock, C.O.2
  • 20
    • 79955705563 scopus 로고    scopus 로고
    • Revisiting gap locations in amino acid sequence alignments and a proposal for a method to improve them by introducing solvent accessibility
    • Hijikata A., Yura K., Noguti T., Go M. Revisiting gap locations in amino acid sequence alignments and a proposal for a method to improve them by introducing solvent accessibility. Proteins 2011, 79:1868-1877.
    • (2011) Proteins , vol.79 , pp. 1868-1877
    • Hijikata, A.1    Yura, K.2    Noguti, T.3    Go, M.4
  • 21
    • 0035803487 scopus 로고    scopus 로고
    • Specific roles of protein-phospholipid interactions in the yeast cytochrome bc1 complex structure
    • Lange C., Nett J.H., Trumpower B.L., Hunte C. Specific roles of protein-phospholipid interactions in the yeast cytochrome bc1 complex structure. EMBO J. 2001, 20:6591-6600.
    • (2001) EMBO J. , vol.20 , pp. 6591-6600
    • Lange, C.1    Nett, J.H.2    Trumpower, B.L.3    Hunte, C.4
  • 22
    • 73949144611 scopus 로고    scopus 로고
    • Toward a quantitative theory of intrinsically disordered proteins and their function
    • Liu J., Faeder J.R., Camacho C.J. Toward a quantitative theory of intrinsically disordered proteins and their function. Proc. Natl. Acad. Sci. U. S. A. 2009, 106:19819-19823.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 19819-19823
    • Liu, J.1    Faeder, J.R.2    Camacho, C.J.3
  • 23
    • 9244237111 scopus 로고    scopus 로고
    • Complex expression pattern of the Barth syndrome gene product tafazzin in human cell lines and murine tissues
    • Lu B., Kelher M.R., Lee D.P., Lewin T.M., Coleman R.A., Choy P.C., Hatch G.M. Complex expression pattern of the Barth syndrome gene product tafazzin in human cell lines and murine tissues. Biochem. Cell Biol. 2004, 82:569-576.
    • (2004) Biochem. Cell Biol. , vol.82 , pp. 569-576
    • Lu, B.1    Kelher, M.R.2    Lee, D.P.3    Lewin, T.M.4    Coleman, R.A.5    Choy, P.C.6    Hatch, G.M.7
  • 24
    • 62249151764 scopus 로고    scopus 로고
    • Formation of molecular species of mitochondrial cardiolipin. 1. A novel transacylation mechanism to shuttle fatty acids between sn-1 and sn-2 positions of multiple phospholipid species
    • Malhotra A., Xu Y., Ren M., Schlame M. Formation of molecular species of mitochondrial cardiolipin. 1. A novel transacylation mechanism to shuttle fatty acids between sn-1 and sn-2 positions of multiple phospholipid species. Biochim. Biophys. Acta 2009, 1791:314-320.
    • (2009) Biochim. Biophys. Acta , vol.1791 , pp. 314-320
    • Malhotra, A.1    Xu, Y.2    Ren, M.3    Schlame, M.4
  • 26
    • 0031552940 scopus 로고    scopus 로고
    • Glycerol-3-phosphate acyltransferase in plants
    • Murata N., Tasaka Y. Glycerol-3-phosphate acyltransferase in plants. Biochim. Biophys. Acta 1997, 1348:10-16.
    • (1997) Biochim. Biophys. Acta , vol.1348 , pp. 10-16
    • Murata, N.1    Tasaka, Y.2
  • 27
    • 26444444082 scopus 로고    scopus 로고
    • Retroviral matrix domains share electrostatic homology: models for membrane binding function throughout the viral life cycle
    • Murray P.S., Li Z., Wang J., Tang C.L., Honig B., Murray D. Retroviral matrix domains share electrostatic homology: models for membrane binding function throughout the viral life cycle. Structure 2005, 13:1521-1531.
    • (2005) Structure , vol.13 , pp. 1521-1531
    • Murray, P.S.1    Li, Z.2    Wang, J.3    Tang, C.L.4    Honig, B.5    Murray, D.6
  • 28
    • 0031204998 scopus 로고    scopus 로고
    • Barth syndrome may be due to an acyltransferase deficiency
    • Neuwald A.F. Barth syndrome may be due to an acyltransferase deficiency. Curr. Biol. 1997, 7:R465-R466.
    • (1997) Curr. Biol. , vol.7 , pp. R465-R466
    • Neuwald, A.F.1
  • 29
    • 17944368066 scopus 로고    scopus 로고
    • Crystal structures of two human pyrophosphorylase isoforms in complexes with UDPGlc(Gal)NAc: role of the alternatively spliced insert in the enzyme oligomeric assembly and active site architecture
    • Peneff C., Ferrari P., Charrier V., Taburet Y., Monnier C., Zamboni V., Winter J., Harnois M., Fassy F., Bourne Y. Crystal structures of two human pyrophosphorylase isoforms in complexes with UDPGlc(Gal)NAc: role of the alternatively spliced insert in the enzyme oligomeric assembly and active site architecture. EMBO J. 2001, 20:6191-6202.
    • (2001) EMBO J. , vol.20 , pp. 6191-6202
    • Peneff, C.1    Ferrari, P.2    Charrier, V.3    Taburet, Y.4    Monnier, C.5    Zamboni, V.6    Winter, J.7    Harnois, M.8    Fassy, F.9    Bourne, Y.10
  • 30
    • 77949360998 scopus 로고    scopus 로고
    • Modularity of intrinsic disorder in the human proteome
    • Pentony M.M., Jones D.T. Modularity of intrinsic disorder in the human proteome. Proteins 2010, 78:212-221.
    • (2010) Proteins , vol.78 , pp. 212-221
    • Pentony, M.M.1    Jones, D.T.2
  • 31
    • 34249898356 scopus 로고    scopus 로고
    • The crucial step in ether phospholipid biosynthesis: structural basis of a noncanonical reaction associated with a peroxisomal disorder
    • Razeto A., Mattiroli F., Carpanelli E., Aliverti A., Pandini V., Coda A., Mattevi A. The crucial step in ether phospholipid biosynthesis: structural basis of a noncanonical reaction associated with a peroxisomal disorder. Structure 2007, 15:683-692.
    • (2007) Structure , vol.15 , pp. 683-692
    • Razeto, A.1    Mattiroli, F.2    Carpanelli, E.3    Aliverti, A.4    Pandini, V.5    Coda, A.6    Mattevi, A.7
  • 32
    • 51449112852 scopus 로고    scopus 로고
    • Cardiolipin synthesis for the assembly of bacterial and mitochondrial membranes
    • Schlame M. Cardiolipin synthesis for the assembly of bacterial and mitochondrial membranes. J. Lipid Res. 2008, 49:1607-1620.
    • (2008) J. Lipid Res. , vol.49 , pp. 1607-1620
    • Schlame, M.1
  • 33
    • 0037113948 scopus 로고    scopus 로고
    • Squash glycerol-3-phosphate (1)-acyltransferase. Alteration of substrate selectivity and identification of arginine and lysine residues important in catalytic activity
    • Slabas A.R., Kroon J.T., Scheirer T.P., Gilroy J.S., Hayman M., Rice D.W., Turnbull A.P., Rafferty J.B., Fawcett T., Simon W.J. Squash glycerol-3-phosphate (1)-acyltransferase. Alteration of substrate selectivity and identification of arginine and lysine residues important in catalytic activity. J. Biol. Chem. 2002, 277:43918-43923.
    • (2002) J. Biol. Chem. , vol.277 , pp. 43918-43923
    • Slabas, A.R.1    Kroon, J.T.2    Scheirer, T.P.3    Gilroy, J.S.4    Hayman, M.5    Rice, D.W.6    Turnbull, A.P.7    Rafferty, J.B.8    Fawcett, T.9    Simon, W.J.10
  • 34
    • 4344697866 scopus 로고    scopus 로고
    • Substrate recognition and selectivity of plant glycerol-3-phosphate acyltransferases (GPATs) from Cucurbita moscata and Spinacea oleracea
    • Tamada T., Feese M.D., Ferri S.R., Kato Y., Yajima R., Toguri T., Kuroki R. Substrate recognition and selectivity of plant glycerol-3-phosphate acyltransferases (GPATs) from Cucurbita moscata and Spinacea oleracea. Acta Crystallogr. D Biol. Crystallogr. 2004, 60:13-21.
    • (2004) Acta Crystallogr. D Biol. Crystallogr. , vol.60 , pp. 13-21
    • Tamada, T.1    Feese, M.D.2    Ferri, S.R.3    Kato, Y.4    Yajima, R.5    Toguri, T.6    Kuroki, R.7
  • 36
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 40
    • 1642504213 scopus 로고    scopus 로고
    • Het-PDB Navi.: a database for protein-small molecule interactions
    • Yamaguchi A., Iida K., Matsui N., Tomoda S., Yura K., Go M. Het-PDB Navi.: a database for protein-small molecule interactions. J. Biochem. 2004, 135:79-84.
    • (2004) J. Biochem. , vol.135 , pp. 79-84
    • Yamaguchi, A.1    Iida, K.2    Matsui, N.3    Tomoda, S.4    Yura, K.5    Go, M.6
  • 41
    • 48849111306 scopus 로고    scopus 로고
    • Correlation between amino acid residues converted by RNA editing and functional residues in protein three-dimensional structures in plant organelles
    • Yura K., Go M. Correlation between amino acid residues converted by RNA editing and functional residues in protein three-dimensional structures in plant organelles. BMC Plant Biol. 2008, 8:79.
    • (2008) BMC Plant Biol. , vol.8 , pp. 79
    • Yura, K.1    Go, M.2
  • 42
    • 75949129772 scopus 로고    scopus 로고
    • The interwinding nature of protein-protein interfaces and its implication for protein complex formation
    • Yura K., Hayward S. The interwinding nature of protein-protein interfaces and its implication for protein complex formation. Bioinformatics 2009, 25:3108-3113.
    • (2009) Bioinformatics , vol.25 , pp. 3108-3113
    • Yura, K.1    Hayward, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.