메뉴 건너뛰기




Volumn 29, Issue 5, 2015, Pages 1092-1103

Erratum: Disruption of SF3B1 results in deregulated expression and splicing of key genes and pathways in myelodysplastic syndrome hematopoietic stem and progenitor cells (Leukemia (2015) 29 (1092-1103) 10.1038/leu.2014.331);Disruption of SF3B1 results in deregulated expression and splicing of key genes and pathways in myelodysplastic syndrome hematopoietic stem and progenitor cells

Author keywords

[No Author keywords available]

Indexed keywords

BCLAF1 PROTEIN; BRCA1 PROTEIN; CBL PROTEIN; CD34 ANTIGEN; IRON; SF3B1 PROTEIN; TRANSCRIPTOME; TUMOR PROTEIN; UNCLASSIFIED DRUG; PHOSPHOPROTEIN; RNA; SF3B1 PROTEIN, HUMAN; SMALL NUCLEAR RIBONUCLEOPROTEIN;

EID: 84929277822     PISSN: 08876924     EISSN: 14765551     Source Type: Journal    
DOI: 10.1038/leu.2015.178     Document Type: Erratum
Times cited : (142)

References (47)
  • 4
    • 84893395823 scopus 로고    scopus 로고
    • The role of splicing factor mutations in the pathogenesis of the myelodysplastic syndromes
    • Boultwood J, Dolatshad H, Varanasi SS, Yip BH, Pellagatti A. The role of splicing factor mutations in the pathogenesis of the myelodysplastic syndromes. Adv Biol Regul 2014; 54: 153-161.
    • (2014) Adv Biol Regul , vol.54 , pp. 153-161
    • Boultwood, J.1    Dolatshad, H.2    Varanasi, S.S.3    Yip, B.H.4    Pellagatti, A.5
  • 5
    • 84893772765 scopus 로고    scopus 로고
    • Landscape of genetic lesions in 944 patients with myelodysplastic syndromes
    • Haferlach T, Nagata Y, Grossmann V, Okuno Y, Bacher U, Nagae G et al. Landscape of genetic lesions in 944 patients with myelodysplastic syndromes. Leukemia 2014; 28: 241-247.
    • (2014) Leukemia , vol.28 , pp. 241-247
    • Haferlach, T.1    Nagata, Y.2    Grossmann, V.3    Okuno, Y.4    Bacher, U.5    Nagae, G.6
  • 6
    • 84876687580 scopus 로고    scopus 로고
    • Mutational analysis of splicing machinery genes SF3B1, U2AF1 and SRSF2 in myelodysplasia and other common tumors
    • Je EM, Yoo NJ, Kim YJ, Kim MS, Lee SH. Mutational analysis of splicing machinery genes SF3B1, U2AF1 and SRSF2 in myelodysplasia and other common tumors. Int J Cancer 2013; 133: 260-265.
    • (2013) Int J Cancer , vol.133 , pp. 260-265
    • Je, E.M.1    Yoo, N.J.2    Kim, Y.J.3    Kim, M.S.4    Lee, S.H.5
  • 7
    • 84888219405 scopus 로고    scopus 로고
    • Clinical and biological implications of driver mutations in myelodysplastic syndromes
    • Papaemmanuil E, Gerstung M, Malcovati L, Tauro S, Gundem G, Van Loo P et al. Clinical and biological implications of driver mutations in myelodysplastic syndromes. Blood 2013; 122: 3616-3627.
    • (2013) Blood , vol.122 , pp. 3616-3627
    • Papaemmanuil, E.1    Gerstung, M.2    Malcovati, L.3    Tauro, S.4    Gundem, G.5    Van Loo, P.6
  • 8
    • 83455234787 scopus 로고    scopus 로고
    • Clinical signifi cance of SF3B1 mutations in myelodysplastic syndromes and myelodysplastic/myeloproliferative neoplasms
    • Malcovati L, Papaemmanuil E, Bowen DT, Boultwood J, Della Porta MG, Pascutto C et al. Clinical signifi cance of SF3B1 mutations in myelodysplastic syndromes and myelodysplastic/myeloproliferative neoplasms. Blood 2011; 118: 6239-6246.
    • (2011) Blood , vol.118 , pp. 6239-6246
    • Malcovati, L.1    Papaemmanuil, E.2    Bowen, D.T.3    Boultwood, J.4    Della Porta, M.G.5    Pascutto, C.6
  • 9
    • 84859856420 scopus 로고    scopus 로고
    • Frequency and prognostic impact of mutations in SRSF2, U2AF1, and ZRSR2 in patients with myelodysplastic syndromes
    • Thol F, Kade S, Schlarmann C, Loffeld P, Morgan M, Krauter J et al. Frequency and prognostic impact of mutations in SRSF2, U2AF1, and ZRSR2 in patients with myelodysplastic syndromes. Blood 2012; 119: 3578-3584.
    • (2012) Blood , vol.119 , pp. 3578-3584
    • Thol, F.1    Kade, S.2    Schlarmann, C.3    Loffeld, P.4    Morgan, M.5    Krauter, J.6
  • 10
    • 0037372442 scopus 로고    scopus 로고
    • Mitochondrial ferritin expression in erythroid cells from patients with sideroblastic anemia
    • Cazzola M, Invernizzi R, Bergamaschi G, Levi S, Corsi B, Travaglino E et al. Mitochondrial ferritin expression in erythroid cells from patients with sideroblastic anemia. Blood 2003; 101: 1996-2000.
    • (2003) Blood , vol.101 , pp. 1996-2000
    • Cazzola, M.1    Invernizzi, R.2    Bergamaschi, G.3    Levi, S.4    Corsi, B.5    Travaglino, E.6
  • 11
    • 84868091622 scopus 로고    scopus 로고
    • SF3B1 haploinsufficiency leads to formation of ring sideroblasts in myelodysplastic syndromes
    • Visconte V, Rogers HJ, Singh J, Barnard J, Bupathi M, Traina F et al. SF3B1 haploinsufficiency leads to formation of ring sideroblasts in myelodysplastic syndromes. Blood 2012; 120: 3173-3186.
    • (2012) Blood , vol.120 , pp. 3173-3186
    • Visconte, V.1    Rogers, H.J.2    Singh, J.3    Barnard, J.4    Bupathi, M.5    Traina, F.6
  • 12
    • 84860767817 scopus 로고    scopus 로고
    • SF3B1 mutations in myelodysplastic syndromes: Clinical associations and prognostic implications
    • Damm F, Thol F, Kosmider O, Kade S, Loffeld P, Dreyfus F et al. SF3B1 mutations in myelodysplastic syndromes: clinical associations and prognostic implications. Leukemia 2012; 26: 1137-1140.
    • (2012) Leukemia , vol.26 , pp. 1137-1140
    • Damm, F.1    Thol, F.2    Kosmider, O.3    Kade, S.4    Loffeld, P.5    Dreyfus, F.6
  • 13
    • 84857994411 scopus 로고    scopus 로고
    • SF3B1, a splicing factor is frequently mutated in refractory anemia with ring sideroblasts
    • Visconte V, Makishima H, Jankowska A, Szpurka H, Traina F, Jerez A et al. SF3B1, a splicing factor is frequently mutated in refractory anemia with ring sideroblasts. Leukemia 2012; 26: 542-545.
    • (2012) Leukemia , vol.26 , pp. 542-545
    • Visconte, V.1    Makishima, H.2    Jankowska, A.3    Szpurka, H.4    Traina, F.5    Jerez, A.6
  • 14
    • 84908299112 scopus 로고    scopus 로고
    • Haploinsufficiency of Sf3b1 leads to compromised stem cell function but not to myelodysplasia
    • Matsunawa M, Yamamoto R, Sanada M, Sato-Otsubo A, Shiozawa Y, Yoshida K et al. Haploinsufficiency of Sf3b1 leads to compromised stem cell function but not to myelodysplasia. Leukemia 2014; 28: 1844-1850.
    • (2014) Leukemia , vol.28 , pp. 1844-1850
    • Matsunawa, M.1    Yamamoto, R.2    Sanada, M.3    Sato-Otsubo, A.4    Shiozawa, Y.5    Yoshida, K.6
  • 15
    • 84903169674 scopus 로고    scopus 로고
    • Depletion of Sf3b1 impairs proliferative capacity of hematopoietic stem cells but is not sufficient to induce myelodysplasia
    • Wang C, Sashida G, Saraya A, Ishiga R, Koide S, Oshima M et al. Depletion of Sf3b1 impairs proliferative capacity of hematopoietic stem cells but is not sufficient to induce myelodysplasia. Blood 2014; 123: 3336-3343.
    • (2014) Blood , vol.123 , pp. 3336-3343
    • Wang, C.1    Sashida, G.2    Saraya, A.3    Ishiga, R.4    Koide, S.5    Oshima, M.6
  • 17
    • 84876107840 scopus 로고    scopus 로고
    • The transporter ABCB7 is a mediator of the phenotype of acquired refractory anemia with ring sideroblasts
    • Nikpour M, Scharenberg C, Liu A, Conte S, Karimi M, Mortera-Blanco T et al. The transporter ABCB7 is a mediator of the phenotype of acquired refractory anemia with ring sideroblasts. Leukemia 2013; 27: 889-896.
    • (2013) Leukemia , vol.27 , pp. 889-896
    • Nikpour, M.1    Scharenberg, C.2    Liu, A.3    Conte, S.4    Karimi, M.5    Mortera-Blanco, T.6
  • 18
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001; 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 20
    • 33745615399 scopus 로고    scopus 로고
    • Gene expression profiles of CD34+ cells in myelodysplastic syndromes: Involvement of interferon-stimulated genes and correlation to FAB subtype and karyotype
    • Pellagatti A, Cazzola M, Giagounidis AA, Malcovati L, Porta MG, Killick S et al. Gene expression profiles of CD34+ cells in myelodysplastic syndromes: involvement of interferon-stimulated genes and correlation to FAB subtype and karyotype. Blood 2006; 108: 337-345.
    • (2006) Blood , vol.108 , pp. 337-345
    • Pellagatti, A.1    Cazzola, M.2    Giagounidis, A.A.3    Malcovati, L.4    Porta, M.G.5    Killick, S.6
  • 21
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    • Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 2005; 102: 15545-15550.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 15545-15550
    • Subramanian, A.1    Tamayo, P.2    Mootha, V.K.3    Mukherjee, S.4    Ebert, B.L.5    Gillette, M.A.6
  • 22
    • 84876297094 scopus 로고    scopus 로고
    • Gene- and exon-expression profiling reveals an extensive LPS-induced response in immune cells in patients with cirrhosis
    • Gandoura S, Weiss E, Rautou PE, Fasseu M, Gustot T, Lemoine F et al. Gene- and exon-expression profiling reveals an extensive LPS-induced response in immune cells in patients with cirrhosis. J Hepatol 2013; 58: 936-948.
    • (2013) J Hepatol , vol.58 , pp. 936-948
    • Gandoura, S.1    Weiss, E.2    Rautou, P.E.3    Fasseu, M.4    Gustot, T.5    Lemoine, F.6
  • 23
    • 84871343422 scopus 로고    scopus 로고
    • Global profiling of alternative splicing events and gene expression regulated by hnRNPH/F
    • Wang E, Aslanzadeh V, Papa F, Zhu H, de la Grange P, Cambi F. Global profiling of alternative splicing events and gene expression regulated by hnRNPH/F. PLoS One 2012; 7: e51266.
    • (2012) PLoS One , vol.7 , pp. e51266
    • Wang, E.1    Aslanzadeh, V.2    Papa, F.3    Zhu, H.4    De La Grange, P.5    Cambi, F.6
  • 24
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang da W, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 2009; 4: 44-57.
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Huang Da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 25
    • 79952220808 scopus 로고    scopus 로고
    • Reduced fidelity of branch point recognition and alternative splicing induced by the anti-tumor drug spliceostatin A
    • Corrionero A, Minana B, Valcarcel J. Reduced fidelity of branch point recognition and alternative splicing induced by the anti-tumor drug spliceostatin A. Genes Dev 2011; 25: 445-459.
    • (2011) Genes Dev , vol.25 , pp. 445-459
    • Corrionero, A.1    Minana, B.2    Valcarcel, J.3
  • 26
    • 84876996918 scopus 로고    scopus 로고
    • TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
    • Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol 2013; 14: R36.
    • (2013) Genome Biol , vol.14 , pp. R36
    • Kim, D.1    Pertea, G.2    Trapnell, C.3    Pimentel, H.4    Kelley, R.5    Salzberg, S.L.6
  • 27
    • 75249087100 scopus 로고    scopus 로고
    • edgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson MD, McCarthy DJ, Smyth GK. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 2010; 26: 139-140.
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 28
    • 84865527768 scopus 로고    scopus 로고
    • Detecting differential usage of exons from RNAseq data
    • Anders S, Reyes A, Huber W. Detecting differential usage of exons from RNAseq data. Genome Res 2012; 22: 2008-2017.
    • (2012) Genome Res , vol.22 , pp. 2008-2017
    • Anders, S.1    Reyes, A.2    Huber, W.3
  • 29
  • 30
    • 33644770145 scopus 로고    scopus 로고
    • High frequency of alternative first exons in erythroid genes suggests a critical role in regulating gene function
    • Tan JS, Mohandas N, Conboy JG. High frequency of alternative first exons in erythroid genes suggests a critical role in regulating gene function. Blood 2006; 107: 2557-2561.
    • (2006) Blood , vol.107 , pp. 2557-2561
    • Tan, J.S.1    Mohandas, N.2    Conboy, J.G.3
  • 31
    • 84892727173 scopus 로고    scopus 로고
    • Mutations in the UQCC1-interacting protein, UQCC2, cause human complex III deficiency associated with perturbed cytochrome b protein expression
    • Tucker EJ, Wanschers BF, Szklarczyk R, Mountford HS, Wijeyeratne XW, van den Brand MA et al. Mutations in the UQCC1-interacting protein, UQCC2, cause human complex III deficiency associated with perturbed cytochrome b protein expression. PLoS Genet 2013; 9: e1004034.
    • (2013) PLoS Genet , vol.9 , pp. e1004034
    • Tucker, E.J.1    Wanschers, B.F.2    Szklarczyk, R.3    Mountford, H.S.4    Wijeyeratne, X.W.5    Van Den Brand, M.A.6
  • 33
    • 84899961614 scopus 로고    scopus 로고
    • Identification of a BRCA1-mRNA splicing complex required for efficient DNA repair and maintenance of genomic stability
    • Savage KI, Gorski JJ, Barros EM, Irwin GW, Manti L, Powell AJ et al. Identification of a BRCA1-mRNA splicing complex required for efficient DNA repair and maintenance of genomic stability. Mol Cell 2014; 54: 445-459.
    • (2014) Mol Cell , vol.54 , pp. 445-459
    • Savage, K.I.1    Gorski, J.J.2    Barros, E.M.3    Irwin, G.W.4    Manti, L.5    Powell, A.J.6
  • 34
    • 33749471110 scopus 로고    scopus 로고
    • RNA interference knockdown of hU2AF35 impairs cell cycle progression and modulates alternative splicing of Cdc25 transcripts
    • Pacheco TR, Moita LF, Gomes AQ, Hacohen N, Carmo-Fonseca M. RNA interference knockdown of hU2AF35 impairs cell cycle progression and modulates alternative splicing of Cdc25 transcripts. Mol Biol Cell 2006; 17: 4187-4199.
    • (2006) Mol Biol Cell , vol.17 , pp. 4187-4199
    • Pacheco, T.R.1    Moita, L.F.2    Gomes, A.Q.3    Hacohen, N.4    Carmo-Fonseca, M.5
  • 35
    • 0029913676 scopus 로고    scopus 로고
    • Blocking the transcription factor E2F/DP by dominant-negative mutants in a normal breast epithelial cell line efficiently inhibits apoptosis and induces tumor growth in SCID mice
    • Bargou RC, Wagener C, Bommert K, Arnold W, Daniel PT, Mapara MY et al. Blocking the transcription factor E2F/DP by dominant-negative mutants in a normal breast epithelial cell line efficiently inhibits apoptosis and induces tumor growth in SCID mice. J Exp Med 1996; 183: 1205-1213.
    • (1996) J Exp Med , vol.183 , pp. 1205-1213
    • Bargou, R.C.1    Wagener, C.2    Bommert, K.3    Arnold, W.4    Daniel, P.T.5    Mapara, M.Y.6
  • 36
    • 84892607116 scopus 로고    scopus 로고
    • Effects of cyclic AMP response element binding protein- Zhangfei (CREBZF) on the unfolded protein response and cell growth are exerted through the tumor suppressor p53
    • Zhang R, Misra V. Effects of cyclic AMP response element binding protein- Zhangfei (CREBZF) on the unfolded protein response and cell growth are exerted through the tumor suppressor p53. Cell Cycle 2014; 13: 279-292.
    • (2014) Cell Cycle , vol.13 , pp. 279-292
    • Zhang, R.1    Misra, V.2
  • 37
    • 84859597590 scopus 로고    scopus 로고
    • Mutations in the spliceosome machinery, a novel and ubiquitous pathway in leukemogenesis
    • Makishima H, Visconte V, Sakaguchi H, Jankowska AM, Abu Kar S, Jerez A et al. Mutations in the spliceosome machinery, a novel and ubiquitous pathway in leukemogenesis. Blood 2012; 119: 3203-3210.
    • (2012) Blood , vol.119 , pp. 3203-3210
    • Makishima, H.1    Visconte, V.2    Sakaguchi, H.3    Jankowska, A.M.4    Abu Kar, S.5    Jerez, A.6
  • 38
    • 84920663583 scopus 로고    scopus 로고
    • Distinct iron architecture in SF3B1-mutant myelodysplastic syndrome patients is linked to an SLC25A37 splice variant with a retained intron
    • Visconte V, Avishai N, Mahfouz R, Tabarroki A, Cowen J, Sharghi-Moshtaghin R et al. Distinct iron architecture in SF3B1-mutant myelodysplastic syndrome patients is linked to an SLC25A37 splice variant with a retained intron. Leukemia 2015; 29: 188-195.
    • (2015) Leukemia , vol.29 , pp. 188-195
    • Visconte, V.1    Avishai, N.2    Mahfouz, R.3    Tabarroki, A.4    Cowen, J.5    Sharghi-Moshtaghin, R.6
  • 40
    • 79958037902 scopus 로고    scopus 로고
    • Ring sideroblasts and sideroblastic anemias
    • Cazzola M, Invernizzi R. Ring sideroblasts and sideroblastic anemias. Haematologica 2011; 96: 789-792.
    • (2011) Haematologica , vol.96 , pp. 789-792
    • Cazzola, M.1    Invernizzi, R.2
  • 41
    • 84896058534 scopus 로고    scopus 로고
    • A regulatory network governing Gata1 and Gata2 gene transcription orchestrates erythroid lineage differentiation
    • Moriguchi T, Yamamoto M. A regulatory network governing Gata1 and Gata2 gene transcription orchestrates erythroid lineage differentiation. Int J Hematol 2014; 100: 417-424.
    • (2014) Int J Hematol , vol.100 , pp. 417-424
    • Moriguchi, T.1    Yamamoto, M.2
  • 42
    • 84887462456 scopus 로고    scopus 로고
    • Myelodysplastic syndromes are induced by histone methylation-altering ASXL1 mutations
    • Inoue D, Kitaura J, Togami K, Nishimura K, Enomoto Y, Uchida T et al. Myelodysplastic syndromes are induced by histone methylation-altering ASXL1 mutations. J Clin Invest 2013; 123: 4627-4640.
    • (2013) J Clin Invest , vol.123 , pp. 4627-4640
    • Inoue, D.1    Kitaura, J.2    Togami, K.3    Nishimura, K.4    Enomoto, Y.5    Uchida, T.6
  • 43
    • 72449175818 scopus 로고    scopus 로고
    • Mammalian SUMO E3-ligases PIAS1 and PIAS4 promote responses to DNA doublestrand breaks
    • Galanty Y, Belotserkovskaya R, Coates J, Polo S, Miller KM, Jackson SP. Mammalian SUMO E3-ligases PIAS1 and PIAS4 promote responses to DNA doublestrand breaks. Nature 2009; 462: 935-939.
    • (2009) Nature , vol.462 , pp. 935-939
    • Galanty, Y.1    Belotserkovskaya, R.2    Coates, J.3    Polo, S.4    Miller, K.M.5    Jackson, S.P.6
  • 44
    • 72449163470 scopus 로고    scopus 로고
    • The SUMO modification pathway is involved in the BRCA1 response to genotoxic stress
    • Morris JR, Boutell C, Keppler M, Densham R, Weekes D, Alamshah A et al. The SUMO modification pathway is involved in the BRCA1 response to genotoxic stress. Nature 2009; 462: 886-890.
    • (2009) Nature , vol.462 , pp. 886-890
    • Morris, J.R.1    Boutell, C.2    Keppler, M.3    Densham, R.4    Weekes, D.5    Alamshah, A.6
  • 47
    • 84879692782 scopus 로고    scopus 로고
    • In vivo mutation of pre-mRNA processing factor 8 (Prpf8) affects transcript splicing, cell survival and myeloid differentiation
    • Keightley MC, Crowhurst MO, Layton JE, Beilharz T, Markmiller S, Varma S et al. In vivo mutation of pre-mRNA processing factor 8 (Prpf8) affects transcript splicing, cell survival and myeloid differentiation. FEBS Lett 2013; 587: 2150-2157.
    • (2013) FEBS Lett , vol.587 , pp. 2150-2157
    • Keightley, M.C.1    Crowhurst, M.O.2    Layton, J.E.3    Beilharz, T.4    Markmiller, S.5    Varma, S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.