Transcriptome dynamics of developing maize leaves and genomewide prediction of cis elements and their cognate transcription factors

Proceedings of the National Academy of Sciences of the United States of America

Volumn 112, Issue 19, 2015, Pages E2477-E2486

  Yu, Chun Ping ^a   Chen, Sean Chun Chang ^b   Chang, Yao Ming ^b   Liu, Wen Yu ^b   Lin, Hsin Hung ^b   Lin, Jinn Jy ^b,c   Chen, Hsiang June ^b   Lu, Yu Ju ^b   Wu, Yi Hsuan ^b   Lu, Mei Yeh Jade ^b   Lu, Chen Hua ^d   Shih, Arthur Chun Chieh ^d   Ku, Maurice Sun Ben ^e,f   Shiu, Shin Han ^a,g   Wu, Shu Hsing ^h   Li, Wen Hsiung ^a,b,i  

^a NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

^b BIODIVERSITY RESEARCH CENTER   (Taiwan)

^c INSTITUTE OF INFORMATION SCIENCE   (Taiwan)

^d INSTITUTE OF PLANT AND MICROBIAL BIOLOGY   (Taiwan)

^e NATIONAL TSING HUA UNIVERSITY   (Taiwan)

^f NATIONAL CHIAYI UNIVERSITY   (Taiwan)

^g WASHINGTON STATE UNIVERSITY   (United States)

^h MICHIGAN STATE UNIVERSITY   (United States)

ⁱ UNIVERSITY OF CHICAGO   (United States)

Author keywords

Cis binding site; Coexpressed genes; Maize transcriptomes

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTOME; PROTEIN BINDING;

ARABIDOPSIS; ARTICLE; BINDING SITE; CONTROLLED STUDY; DOWN REGULATION; GENE EXPRESSION; GENE ONTOLOGY; GENE SEQUENCE; GENETIC CONSERVATION; GENETIC TRANSCRIPTION; GERMINATION; IN VITRO STUDY; LEAF DEVELOPMENT; MAIZE; MOLECULAR DYNAMICS; MULTIGENE FAMILY; NONHUMAN; PLANT GENE; PLANT LEAF; PLANT SEED; PREDICTION; PRIORITY JOURNAL; RICE; UPREGULATION; BIOLOGY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; ORYZA; PHOTOSYNTHESIS; PLANT GENOME; PROMOTER REGION; PROTEIN MOTIF;

ARABIDOPSIS; ZEA MAYS;

AMINO ACID MOTIFS; ARABIDOPSIS; BINDING SITES; COMPUTATIONAL BIOLOGY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE EXPRESSION REGULATION, PLANT; GENOME, PLANT; MULTIGENE FAMILY; ORYZA; PHOTOSYNTHESIS; PLANT LEAVES; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC; TRANSCRIPTOME; ZEA MAYS;

EID: 84929208119     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1500605112     Document Type: Article

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