-
1
-
-
33747853795
-
The breadth of bacterial diversity in the human periodontal pocket and other oral sites
-
PMID: 16930307
-
Paster BJ, Olsen I, Aas JA, Dewhirst FE (2006) The breadth of bacterial diversity in the human periodontal pocket and other oral sites. Periodontol 2000 42: 80-87. PMID: 16930307
-
(2006)
Periodontol 2000
, vol.42
, pp. 80-87
-
-
Paster, B.J.1
Olsen, I.2
Aas, J.A.3
Dewhirst, F.E.4
-
2
-
-
58149218590
-
Pyrosequencing analysis of the oral microflora of healthy adults
-
PMID: 18946007
-
Keijser BJ, Zaura E, Huse SM, van der Vossen JM, Schuren FH, Montijn RC, et al. (2008) Pyrosequencing analysis of the oral microflora of healthy adults. J Dent Res 87: 1016-1020. PMID: 18946007
-
(2008)
J Dent Res
, vol.87
, pp. 1016-1020
-
-
Keijser, B.J.1
Zaura, E.2
Huse, S.M.3
Van Der Vossen, J.M.4
Schuren, F.H.5
Montijn, R.C.6
-
3
-
-
74949134895
-
Defining the healthy "core microbiome" of oral microbial communities
-
PMID: 20003481
-
Zaura E, Keijser BJ, Huse SM, Crielaard W (2009) Defining the healthy "core microbiome" of oral microbial communities. BMC Microbiol 9: 259. doi: 10.1186/1471-2180-9-259 PMID: 20003481
-
(2009)
BMC Microbiol
, vol.9
, pp. 259
-
-
Zaura, E.1
Keijser, B.J.2
Huse, S.M.3
Crielaard, W.4
-
4
-
-
76149144203
-
Oral microbiology: Past, present and future
-
PMID: 20687296
-
He XS, Shi WY (2009) Oral microbiology: past, present and future. Int J Oral Sci 1: 47-58. doi: 10.4248/ijos.09029 PMID: 20687296
-
(2009)
Int J Oral Sci
, vol.1
, pp. 47-58
-
-
He, X.S.1
Shi, W.Y.2
-
5
-
-
84862162269
-
Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples
-
PMID: 22698087
-
Segata N, Haake SK, Mannon P, Lemon KP, Waldron L, Gevers D, et al. (2012) Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples. Genome Biol 13: R42. doi: 10.1186/gb-2012-13-6-r42 PMID: 22698087
-
(2012)
Genome Biol
, vol.13
, pp. R42
-
-
Segata, N.1
Haake, S.K.2
Mannon, P.3
Lemon, K.P.4
Waldron, L.5
Gevers, D.6
-
6
-
-
84927560563
-
Oral microbiota and host innate immune response in bisphosphonate-related osteonecrosis of the jaw
-
PMID: 25105817
-
Pushalkar S, Li X, Kurago Z, Ramanathapuram LV, Matsumura S, Fleisher KE, et al. (2014) Oral microbiota and host innate immune response in bisphosphonate-related osteonecrosis of the jaw. Int J Oral Sci 6: 219-226. doi: 10.1038/ijos.2014.46 PMID: 25105817
-
(2014)
Int J Oral Sci
, vol.6
, pp. 219-226
-
-
Pushalkar, S.1
Li, X.2
Kurago, Z.3
Ramanathapuram, L.V.4
Matsumura, S.5
Fleisher, K.E.6
-
7
-
-
35348968286
-
The human microbiome project
-
PMID: 17943116
-
Turnbaugh PJ, Ley RE, Hamady M, Fraser-Liggett CM, Knight R, Gordon JI. (2007) The human microbiome project. Nature 449: 804-810. PMID: 17943116
-
(2007)
Nature
, vol.449
, pp. 804-810
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Hamady, M.3
Fraser-Liggett, C.M.4
Knight, R.5
Gordon, J.I.6
-
8
-
-
84862173705
-
A core human microbiome as viewed through 16S rRNA sequence clusters
-
PMID: 22719824
-
Huse SM, Ye Y, Zhou Y, Fodor AA (2012) A core human microbiome as viewed through 16S rRNA sequence clusters. PLoS One 7: e34242. doi: 10.1371/journal.pone.0034242 PMID: 22719824
-
(2012)
PLoS One
, vol.7
, pp. e34242
-
-
Huse, S.M.1
Ye, Y.2
Zhou, Y.3
Fodor, A.A.4
-
9
-
-
77957168527
-
Study of inter- and intra-individual variations in the salivary microbiota
-
PMID: 20920195
-
Lazarevic V, Whiteson K, Hernandez D, Francois P, Schrenzel J (2010) Study of inter- and intra-individual variations in the salivary microbiota. BMC Genomics 11: 523. doi: 10.1186/1471-2164-11-523 PMID: 20920195
-
(2010)
BMC Genomics
, vol.11
, pp. 523
-
-
Lazarevic, V.1
Whiteson, K.2
Hernandez, D.3
Francois, P.4
Schrenzel, J.5
-
10
-
-
84878708884
-
Pyrosequencing analysis of the human microbiota of healthy Chinese undergraduates
-
PMID: 23758874
-
Ling Z, Liu X, Luo Y, Yuan L, Nelson KE, Wang Y, et al. (2013) Pyrosequencing analysis of the human microbiota of healthy Chinese undergraduates. BMC Genomics 14: 390. doi: 10.1186/1471-2164-14-390 PMID: 23758874
-
(2013)
BMC Genomics
, vol.14
, pp. 390
-
-
Ling, Z.1
Liu, X.2
Luo, Y.3
Yuan, L.4
Nelson, K.E.5
Wang, Y.6
-
11
-
-
84874317213
-
Exploring the dynamic core microbiome of plaque microbiota during head-and-neck radiotherapy using pyrosequencing
-
PMID: 23437114
-
Hu YJ, Shao ZY, Wang Q, Jiang YT, Ma R, Tang ZS, et al. (2013) Exploring the dynamic core microbiome of plaque microbiota during head-and-neck radiotherapy using pyrosequencing. PLoS One 8: e56343. doi: 10.1371/journal.pone.0056343 PMID: 23437114
-
(2013)
PLoS One
, vol.8
, pp. e56343
-
-
Hu, Y.J.1
Shao, Z.Y.2
Wang, Q.3
Jiang, Y.T.4
Ma, R.5
Tang, Z.S.6
-
12
-
-
67650021209
-
Microbial community profiling for human microbiome projects: Tools, techniques, and challenges
-
PMID: 19383763
-
Hamady M, Knight R (2009) Microbial community profiling for human microbiome projects: Tools, techniques, and challenges. Genome Res 19: 1141-1152. doi: 10.1101/gr.085464.108 PMID: 19383763
-
(2009)
Genome Res
, vol.19
, pp. 1141-1152
-
-
Hamady, M.1
Knight, R.2
-
13
-
-
84855294263
-
Beyond the Venn diagram: The hunt for a core microbiome
-
PMID: 22004523
-
Shade A, Handelsman J (2012) Beyond the Venn diagram: the hunt for a core microbiome. Environ Microbiol 14: 4-12. doi: 10.1111/j.1462-2920.2011.02585.x PMID: 22004523
-
(2012)
Environ Microbiol
, vol.14
, pp. 4-12
-
-
Shade, A.1
Handelsman, J.2
-
14
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
PMID: 20383131
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nature Methods 7: 335-336. doi: 10.1038/nmeth.f.303 PMID: 20383131
-
(2010)
Nature Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
15
-
-
84867391206
-
Species-level analysis of DNA sequence data from the NIH Human Microbiome Project
-
PMID: 23071716
-
Conlan S, Kong HH, Segre JA (2012) Species-level analysis of DNA sequence data from the NIH Human Microbiome Project. PLoS One 7: e47075. doi: 10.1371/journal.pone.0047075 PMID: 23071716
-
(2012)
PLoS One
, vol.7
, pp. e47075
-
-
Conlan, S.1
Kong, H.H.2
Segre, J.A.3
-
16
-
-
79951514459
-
Investigation of supragingival plaque microbiota in different caries status of Chinese preschool children by denaturing gradient gel electrophoresis
-
PMID: 20927511
-
Jiang W, Jiang Y, Li C, Liang J (2011) Investigation of supragingival plaque microbiota in different caries status of Chinese preschool children by denaturing gradient gel electrophoresis. Microb Ecol 61: 342-352. doi: 10.1007/s00248-010-9753-z PMID: 20927511
-
(2011)
Microb Ecol
, vol.61
, pp. 342-352
-
-
Jiang, W.1
Jiang, Y.2
Li, C.3
Liang, J.4
-
17
-
-
84885840409
-
Pyrosequencing analysis of oral microbiota in children with severe early childhood dental caries
-
PMID: 23743597
-
Jiang W, Zhang J, Chen H (2013) Pyrosequencing analysis of oral microbiota in children with severe early childhood dental caries. Curr Microbiol 67: 537-542. doi: 10.1007/s00284-013-0393-7 PMID: 23743597
-
(2013)
Curr Microbiol
, vol.67
, pp. 537-542
-
-
Jiang, W.1
Zhang, J.2
Chen, H.3
-
18
-
-
84876773404
-
Characterization of oral bacterial diversity of irradiated patients by high-throughput sequencing
-
PMID: 23538641
-
Hu YJ, Wang Q, Jiang YT, Ma R, Xia WW, Tang ZS, et al. (2013) Characterization of oral bacterial diversity of irradiated patients by high-throughput sequencing. Int J Oral Sci 5: 21-25. doi: 10.1038/ijos. 2013.15 PMID: 23538641
-
(2013)
Int J Oral Sci
, vol.5
, pp. 21-25
-
-
Hu, Y.J.1
Wang, Q.2
Jiang, Y.T.3
Ma, R.4
Xia, W.W.5
Tang, Z.S.6
-
19
-
-
84897392010
-
Oral mycobiome analysis of HIV-infected patients: Identification of Pichia as an antagonist of opportunistic fungi
-
PMID: 24626467
-
Mukherjee PK, Chandra J, Retuerto M, Sikaroodi M, Brown RE, Jurevic R, et al. (2014) Oral mycobiome analysis of HIV-infected patients: identification of Pichia as an antagonist of opportunistic fungi. PLoS Pathog 10: e1003996. doi: 10.1371/journal.ppat.1003996 PMID: 24626467
-
(2014)
PLoS Pathog
, vol.10
, pp. e1003996
-
-
Mukherjee, P.K.1
Chandra, J.2
Retuerto, M.3
Sikaroodi, M.4
Brown, R.E.5
Jurevic, R.6
-
20
-
-
84892845455
-
Microbial basis of oral malodor development in humans
-
PMID: 24101743
-
Yang F, Huang S, He T, Catrenich C, Teng F, Bo C, et al. (2013) Microbial basis of oral malodor development in humans. J Dent Res 92: 1106-1112. doi: 10.1177/0022034513507065 PMID: 24101743
-
(2013)
J Dent Res
, vol.92
, pp. 1106-1112
-
-
Yang, F.1
Huang, S.2
He, T.3
Catrenich, C.4
Teng, F.5
Bo, C.6
-
21
-
-
84881310267
-
Dynamics of oral microbial community profiling during severe early childhood caries development monitored by PCR-DGGE
-
PMID: 23664249
-
Tao Y, Zhou Y, Ouyang Y, Lin H (2013) Dynamics of oral microbial community profiling during severe early childhood caries development monitored by PCR-DGGE. Arch Oral Biol 58: 1129-1138. doi: 10. 1016/j.archoralbio.2013.04.005 PMID: 23664249
-
(2013)
Arch Oral Biol
, vol.58
, pp. 1129-1138
-
-
Tao, Y.1
Zhou, Y.2
Ouyang, Y.3
Lin, H.4
-
22
-
-
84865085552
-
Compositional stability of a salivary bacterial population against supragingival microbiota shift following periodontal therapy
-
PMID: 22916162
-
Yamanaka W, Takeshita T, Shibata Y, Matsuo K, Eshima N, Yokoyama T, et al. (2012) Compositional stability of a salivary bacterial population against supragingival microbiota shift following periodontal therapy. PLoS One 7: e42806. doi: 10.1371/journal.pone.0042806 PMID: 22916162
-
(2012)
PLoS One
, vol.7
, pp. e42806
-
-
Yamanaka, W.1
Takeshita, T.2
Shibata, Y.3
Matsuo, K.4
Eshima, N.5
Yokoyama, T.6
-
23
-
-
84888045490
-
Oral bacterial community dynamics in paediatric patients with malignancies in relation to chemotherapy-related oral mucositis: A prospective study
-
PMID: 23829394
-
Ye Y, Carlsson G, Agholme MB, Wilson JA, Roos A, Henriques-Normark B, et al. (2013) Oral bacterial community dynamics in paediatric patients with malignancies in relation to chemotherapy-related oral mucositis: a prospective study. Clin Microbiol Infect 19: E559-567. doi: 10.1111/1469-0691.12287 PMID: 23829394
-
(2013)
Clin Microbiol Infect
, vol.19
, pp. E559-E567
-
-
Ye, Y.1
Carlsson, G.2
Agholme, M.B.3
Wilson, J.A.4
Roos, A.5
Henriques-Normark, B.6
-
24
-
-
84904265213
-
Oral microbiota distinguishes acute lymphoblastic leukemia pediatric hosts from healthy populations
-
PMID: 25025462
-
Wang Y, Xue J, Zhou X, You M, Du Q, Yang X, et al. (2014) Oral microbiota distinguishes acute lymphoblastic leukemia pediatric hosts from healthy populations. PLoS One 9: e102116. doi: 10.1371/journal.pone.0102116 PMID: 25025462
-
(2014)
PLoS One
, vol.9
, pp. e102116
-
-
Wang, Y.1
Xue, J.2
Zhou, X.3
You, M.4
Du, Q.5
Yang, X.6
-
25
-
-
84925042093
-
Oral cavity contains distinct niches with dynamic microbial communities
-
Xu X, He J, Xue J, Wang Y, Li K, Zhang K, et al. (2014) Oral cavity contains distinct niches with dynamic microbial communities. Environ Microbiol.
-
(2014)
Environ Microbiol
-
-
Xu, X.1
He, J.2
Xue, J.3
Wang, Y.4
Li, K.5
Zhang, K.6
-
26
-
-
52449129099
-
Then and now: Use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories
-
PMID: 18828852
-
Woo PC, Lau SK, Teng JL, Tse H, Yuen KY (2008) Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories. Clin Microbiol Infect 14: 908-934. doi: 10.1111/j.1469-0691.2008.02070.x PMID: 18828852
-
(2008)
Clin Microbiol Infect
, vol.14
, pp. 908-934
-
-
Woo, P.C.1
Lau, S.K.2
Teng, J.L.3
Tse, H.4
Yuen, K.Y.5
-
27
-
-
84355161776
-
The oral metagenome in health and disease
-
PMID: 21716308
-
Belda-Ferre P, Alcaraz LD, Cabrera-Rubio R, Romero H, Simon-Soro A, Pignatelli M, et al. (2012) The oral metagenome in health and disease. Isme j 6: 46-56. doi: 10.1038/ismej.2011.85 PMID: 21716308
-
(2012)
Isme J
, vol.6
, pp. 46-56
-
-
Belda-Ferre, P.1
Alcaraz, L.D.2
Cabrera-Rubio, R.3
Romero, H.4
Simon-Soro, A.5
Pignatelli, M.6
-
28
-
-
84871658461
-
The human microbiome: Our second genome
-
PMID: 22703178
-
Grice EA, Segre JA (2012) The human microbiome: our second genome. Annu Rev Genomics Hum Genet 13: 151-170. doi: 10.1146/annurev-genom-090711-163814 PMID: 22703178
-
(2012)
Annu Rev Genomics Hum Genet
, vol.13
, pp. 151-170
-
-
Grice, E.A.1
Segre, J.A.2
-
29
-
-
84876114864
-
Microbial diversity in the oral cavity of healthy Chinese Han children
-
PMID: 23034082
-
Xin BC, Luo AH, Qin J, Paster BJ, Xu YL, Li YL, et al. (2013) Microbial diversity in the oral cavity of healthy Chinese Han children. Oral Dis 19: 401-405. doi: 10.1111/odi.12018 PMID: 23034082
-
(2013)
Oral Dis
, vol.19
, pp. 401-405
-
-
Xin, B.C.1
Luo, A.H.2
Qin, J.3
Paster, B.J.4
Xu, Y.L.5
Li, Y.L.6
-
30
-
-
84874789103
-
The dental plaque microbiome in health and disease
-
PMID: 23520516
-
Peterson SN, Snesrud E, Liu J, Ong AC, Kilian M, Schork NJ, et al. (2013) The dental plaque microbiome in health and disease. PLoS One 8: e58487. doi: 10.1371/journal.pone.0058487 PMID: 23520516
-
(2013)
PLoS One
, vol.8
, pp. e58487
-
-
Peterson, S.N.1
Snesrud, E.2
Liu, J.3
Ong, A.C.4
Kilian, M.5
Schork, N.J.6
-
31
-
-
84878728889
-
Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease
-
PMID: 23673380
-
Wang J, Qi J, Zhao H, He S, Zhang Y, Wei S, et al. (2013) Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease. Sci Rep 3: 1843. doi: 10.1038/srep01843 PMID: 23673380
-
(2013)
Sci Rep
, vol.3
, pp. 1843
-
-
Wang, J.1
Qi, J.2
Zhao, H.3
He, S.4
Zhang, Y.5
Wei, S.6
-
32
-
-
84873708523
-
The oral microbiome in health and disease
-
PMID: 23201354
-
Wade WG (2013) The oral microbiome in health and disease. Pharmacol Res 69: 137-143. doi: 10. 1016/j.phrs.2012.11.006 PMID: 23201354
-
(2013)
Pharmacol Res
, vol.69
, pp. 137-143
-
-
Wade, W.G.1
-
33
-
-
33750344695
-
16S rRNA sequencing in routine bacterial identification: A 30-month experiment
-
PMID: 16859787
-
Mignard S, Flandrois JP (2006) 16S rRNA sequencing in routine bacterial identification: a 30-month experiment. J Microbiol Methods 67: 574-581. PMID: 16859787
-
(2006)
J Microbiol Methods
, vol.67
, pp. 574-581
-
-
Mignard, S.1
Flandrois, J.P.2
-
34
-
-
84877091328
-
Analyses of the stability and core taxonomic memberships of the human microbiome
-
PMID: 23671663
-
Li K, Bihan M, Methe BA (2013) Analyses of the stability and core taxonomic memberships of the human microbiome. PLoS One 8: e63139. doi: 10.1371/journal.pone.0063139 PMID: 23671663
-
(2013)
PLoS One
, vol.8
, pp. e63139
-
-
Li, K.1
Bihan, M.2
Methe, B.A.3
-
35
-
-
84864778682
-
Defining the human microbiome
-
PMID: 22861806
-
Ursell LK, Metcalf JL, Parfrey LW, Knight R (2012) Defining the human microbiome. Nutr Rev 70 Suppl 1: S38-44. doi: 10.1111/j.1753-4887.2012.00493.x PMID: 22861806
-
(2012)
Nutr Rev
, vol.70
, pp. S38-S44
-
-
Ursell, L.K.1
Metcalf, J.L.2
Parfrey, L.W.3
Knight, R.4
|