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Volumn 58, Issue 4, 2015, Pages 205-210

Homozygous missense mutation in STYXL1 associated with moderate intellectual disability, epilepsy and behavioural complexities

Author keywords

Consanguineous; Exome sequencing; Linkage; STYXL1

Indexed keywords

CARBAMAZEPINE; LAMOTRIGINE; OXCARBAZEPINE; PROTEIN; SERINE THREONINE TYROSINE INTERACTING LIKE 1; TOPIRAMATE; UNCLASSIFIED DRUG; VALPROIC ACID; APOPTOSIS REGULATORY PROTEIN; MK-STYX PROTEIN, HUMAN;

EID: 84928945330     PISSN: 17697212     EISSN: 18780849     Source Type: Journal    
DOI: 10.1016/j.ejmg.2015.02.006     Document Type: Article
Times cited : (11)

References (31)
  • 1
    • 0036338150 scopus 로고    scopus 로고
    • Merlin-rapid analysis of dense genetic maps using sparse gene flow trees
    • Abecasis G.R., Cherny S.S., Cookson W.O., Cardon L.R. Merlin-rapid analysis of dense genetic maps using sparse gene flow trees. Nat Genet 2002, 30:97-101.
    • (2002) Nat Genet , vol.30 , pp. 97-101
    • Abecasis, G.R.1    Cherny, S.S.2    Cookson, W.O.3    Cardon, L.R.4
  • 3
    • 84868196065 scopus 로고    scopus 로고
    • De novo gain-of-function KCNT1 channel mutations cause malignant migrating partial seizures of infancy
    • Barcia G., Fleming M.R., Deligniere A., Gazula V.R., Brown M.R., Langouet M., et al. De novo gain-of-function KCNT1 channel mutations cause malignant migrating partial seizures of infancy. Nat Genet 2012, 44:1255-1259.
    • (2012) Nat Genet , vol.44 , pp. 1255-1259
    • Barcia, G.1    Fleming, M.R.2    Deligniere, A.3    Gazula, V.R.4    Brown, M.R.5    Langouet, M.6
  • 4
    • 84872046866 scopus 로고    scopus 로고
    • The pseudophosphatase MK-STYX inhibits stress granule assembly independently of Ser149 phosphorylation of G3BP-1
    • Barr J.E., Munyikwa M.R., Frazier E.A., Hinton S.D. The pseudophosphatase MK-STYX inhibits stress granule assembly independently of Ser149 phosphorylation of G3BP-1. Febs J 2013, 280:273-284.
    • (2013) Febs J , vol.280 , pp. 273-284
    • Barr, J.E.1    Munyikwa, M.R.2    Frazier, E.A.3    Hinton, S.D.4
  • 6
    • 34948899272 scopus 로고    scopus 로고
    • Detection of genomic copy number changes in patients with idiopathic mental retardation by high-resolution X-array-CGH: important role for increased gene dosage of XLMR genes
    • Froyen G., Van Esch H., Bauters M., Hollanders K., Frints S.G., Vermeesch J.R., et al. Detection of genomic copy number changes in patients with idiopathic mental retardation by high-resolution X-array-CGH: important role for increased gene dosage of XLMR genes. Hum Mutat 2007, 28:1034-1042.
    • (2007) Hum Mutat , vol.28 , pp. 1034-1042
    • Froyen, G.1    Van Esch, H.2    Bauters, M.3    Hollanders, K.4    Frints, S.G.5    Vermeesch, J.R.6
  • 7
    • 0002345468 scopus 로고    scopus 로고
    • DNA composition, codon usage and exon prediction
    • Academic Press, M.J. Bishop (Ed.)
    • Guigo R. DNA composition, codon usage and exon prediction. Genetic Databases 1999, 53-80. Academic Press. M.J. Bishop (Ed.).
    • (1999) Genetic Databases , pp. 53-80
    • Guigo, R.1
  • 9
    • 84855827661 scopus 로고    scopus 로고
    • PRRT2 mutations cause benign familial infantile epilepsy and infantile convulsions with choreoathetosis syndrome
    • Heron S.E., Grinton B.E., Kivity S., Afawi Z., Zuberi S.M., Hughes J.N., et al. PRRT2 mutations cause benign familial infantile epilepsy and infantile convulsions with choreoathetosis syndrome. Am J Hum Genet 2012, 90:152-160.
    • (2012) Am J Hum Genet , vol.90 , pp. 152-160
    • Heron, S.E.1    Grinton, B.E.2    Kivity, S.3    Afawi, Z.4    Zuberi, S.M.5    Hughes, J.N.6
  • 10
    • 84868196552 scopus 로고    scopus 로고
    • Missense mutations in the sodium-gated potassium channel gene KCNT1 cause severe autosomal dominant nocturnal frontal lobe epilepsy
    • Heron S.E., Smith K.R., Bahlo M., Nobili L., Kahana E., Licchetta L., et al. Missense mutations in the sodium-gated potassium channel gene KCNT1 cause severe autosomal dominant nocturnal frontal lobe epilepsy. Nat Genet 2012, 44:1188-1190.
    • (2012) Nat Genet , vol.44 , pp. 1188-1190
    • Heron, S.E.1    Smith, K.R.2    Bahlo, M.3    Nobili, L.4    Kahana, E.5    Licchetta, L.6
  • 11
    • 77951229195 scopus 로고    scopus 로고
    • The pseudophosphatase MK-STYX interacts with G3BP and decreases stress granule formation
    • Hinton S.D., Myers M.P., Roggero V.R., Allison L.A., Tonks N.K. The pseudophosphatase MK-STYX interacts with G3BP and decreases stress granule formation. Biochem J 2010, 427:349-357.
    • (2010) Biochem J , vol.427 , pp. 349-357
    • Hinton, S.D.1    Myers, M.P.2    Roggero, V.R.3    Allison, L.A.4    Tonks, N.K.5
  • 12
    • 84877045763 scopus 로고    scopus 로고
    • Homozygous and heterozygous disruptions of ANK3: at the crossroads of neurodevelopmental and psychiatric disorders
    • Iqbal Z., Vandeweyer G., van der Voet M., Waryah A.M., Zahoor M.Y., Besseling J.A., et al. Homozygous and heterozygous disruptions of ANK3: at the crossroads of neurodevelopmental and psychiatric disorders. Hum Mol Genet 2013, 22:1960-1970.
    • (2013) Hum Mol Genet , vol.22 , pp. 1960-1970
    • Iqbal, Z.1    Vandeweyer, G.2    van der Voet, M.3    Waryah, A.M.4    Zahoor, M.Y.5    Besseling, J.A.6
  • 13
    • 84892577372 scopus 로고    scopus 로고
    • HUWE1 mutation explains phenotypic severity in a case of familial idiopathic intellectual disability
    • Isrie M., Kalscheuer V.M., Holvoet M., Fieremans N., Van Esch H., Devriendt K. HUWE1 mutation explains phenotypic severity in a case of familial idiopathic intellectual disability. Eur J Med Genet 2013, 56:379-382.
    • (2013) Eur J Med Genet , vol.56 , pp. 379-382
    • Isrie, M.1    Kalscheuer, V.M.2    Holvoet, M.3    Fieremans, N.4    Van Esch, H.5    Devriendt, K.6
  • 15
    • 34147116715 scopus 로고    scopus 로고
    • Most rare missense alleles are deleterious in humans: implications for complex disease and association studies
    • Kryukov G.V., Pennacchio L.A., Sunyaev S.R. Most rare missense alleles are deleterious in humans: implications for complex disease and association studies. Am J Hum Genet 2007, 80:727-739.
    • (2007) Am J Hum Genet , vol.80 , pp. 727-739
    • Kryukov, G.V.1    Pennacchio, L.A.2    Sunyaev, S.R.3
  • 17
    • 77956295988 scopus 로고    scopus 로고
    • The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data
    • McKenna A., Hanna M., Banks E., Sivachenko A., Cibulskis K., Kernytsky A., et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res 2010, 20:1297-1303.
    • (2010) Genome Res , vol.20 , pp. 1297-1303
    • McKenna, A.1    Hanna, M.2    Banks, E.3    Sivachenko, A.4    Cibulskis, K.5    Kernytsky, A.6
  • 18
    • 80053906761 scopus 로고    scopus 로고
    • Deep sequencing reveals 50 novel genes for recessive cognitive disorders
    • Najmabadi H., Hu H., Garshasbi M., Zemojtel T., Abedini S.S., Chen W., et al. Deep sequencing reveals 50 novel genes for recessive cognitive disorders. Nature 2011, 478:57-63.
    • (2011) Nature , vol.478 , pp. 57-63
    • Najmabadi, H.1    Hu, H.2    Garshasbi, M.3    Zemojtel, T.4    Abedini, S.S.5    Chen, W.6
  • 19
    • 0043122919 scopus 로고    scopus 로고
    • SIFT: predicting amino acid changes that affect protein function
    • Ng P.C., Henikoff S. SIFT: predicting amino acid changes that affect protein function. Nucleic Acids Res 2003, 31:3812-3814.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3812-3814
    • Ng, P.C.1    Henikoff, S.2
  • 20
    • 79953791483 scopus 로고    scopus 로고
    • MK-STYX, a catalytically inactive phosphatase regulating mitochondrially dependent apoptosis
    • Niemi N.M., Lanning N.J., Klomp J.A., Tait S.W., Xu Y., Dykema K.J., et al. MK-STYX, a catalytically inactive phosphatase regulating mitochondrially dependent apoptosis. Mol Cell Biol 2011, 31:1357-1368.
    • (2011) Mol Cell Biol , vol.31 , pp. 1357-1368
    • Niemi, N.M.1    Lanning, N.J.2    Klomp, J.A.3    Tait, S.W.4    Xu, Y.5    Dykema, K.J.6
  • 21
    • 84899428608 scopus 로고    scopus 로고
    • The pseudophosphatase MK-STYX Physically and Genetically interacts with the Mitochondrial phosphatase PTPMT1
    • Niemi N.M., Sacoman J.L., Westrate L.M., Gaither L.A., Lanning N.J., Martin K.R., et al. The pseudophosphatase MK-STYX Physically and Genetically interacts with the Mitochondrial phosphatase PTPMT1. PLoS One 2014, 9:e93896.
    • (2014) PLoS One , vol.9 , pp. e93896
    • Niemi, N.M.1    Sacoman, J.L.2    Westrate, L.M.3    Gaither, L.A.4    Lanning, N.J.5    Martin, K.R.6
  • 22
    • 84867732569 scopus 로고    scopus 로고
    • Speeding with control: codon usage, tRNAs, and ribosomes
    • Novoa E.M., Ribas de Pouplana L. Speeding with control: codon usage, tRNAs, and ribosomes. Trends Genet 2012, 28:574-581.
    • (2012) Trends Genet , vol.28 , pp. 574-581
    • Novoa, E.M.1    Ribas de Pouplana, L.2
  • 23
    • 62149114138 scopus 로고    scopus 로고
    • Dual-specificity phosphatases: critical regulators with diverse cellular targets
    • Patterson K.I., Brummer T., O'Brien P.M., Daly R.J. Dual-specificity phosphatases: critical regulators with diverse cellular targets. Biochem J 2009, 418:475-489.
    • (2009) Biochem J , vol.418 , pp. 475-489
    • Patterson, K.I.1    Brummer, T.2    O'Brien, P.M.3    Daly, R.J.4
  • 24
    • 74949092081 scopus 로고    scopus 로고
    • Detection of nonneutral substitution rates on mammalian phylogenies
    • Pollard K.S., Hubisz M.J., Rosenbloom K.R., Siepel A. Detection of nonneutral substitution rates on mammalian phylogenies. Genome Res 2010, 20:110-121.
    • (2010) Genome Res , vol.20 , pp. 110-121
    • Pollard, K.S.1    Hubisz, M.J.2    Rosenbloom, K.R.3    Siepel, A.4
  • 25
    • 84868543309 scopus 로고    scopus 로고
    • Range of genetic mutations associated with severe non-syndromic sporadic intellectual disability: an exome sequencing study
    • Rauch A., Wieczorek D., Graf E., Wieland T., Endele S., Schwarzmayr T., et al. Range of genetic mutations associated with severe non-syndromic sporadic intellectual disability: an exome sequencing study. Lancet 2012, 380:1674-1682.
    • (2012) Lancet , vol.380 , pp. 1674-1682
    • Rauch, A.1    Wieczorek, D.2    Graf, E.3    Wieland, T.4    Endele, S.5    Schwarzmayr, T.6
  • 26
    • 84897456458 scopus 로고    scopus 로고
    • MutationTaster2: mutation prediction for the deep-sequencing age
    • Schwarz J.M., Cooper D.N., Schuelke M., Seelow D. MutationTaster2: mutation prediction for the deep-sequencing age. Nat Methods 2014, 11:361-362.
    • (2014) Nat Methods , vol.11 , pp. 361-362
    • Schwarz, J.M.1    Cooper, D.N.2    Schuelke, M.3    Seelow, D.4
  • 27
    • 84866551236 scopus 로고    scopus 로고
    • Annotate-it: a Swiss-knife approach to annotation, analysis and interpretation of single nucleotide variation in human disease
    • Sifrim A., Van Houdt J.K., Tranchevent L.C., Nowakowska B., Sakai R., Pavlopoulos G.A., et al. Annotate-it: a Swiss-knife approach to annotation, analysis and interpretation of single nucleotide variation in human disease. Genome Med 2012, 4:73.
    • (2012) Genome Med , vol.4 , pp. 73
    • Sifrim, A.1    Van Houdt, J.K.2    Tranchevent, L.C.3    Nowakowska, B.4    Sakai, R.5    Pavlopoulos, G.A.6
  • 28
    • 35948984173 scopus 로고    scopus 로고
    • PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data
    • Wang K., Li M., Hadley D., Liu R., Glessner J., Grant S.F., et al. PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data. Genome Res 2007, 17:1665-1674.
    • (2007) Genome Res , vol.17 , pp. 1665-1674
    • Wang, K.1    Li, M.2    Hadley, D.3    Liu, R.4    Glessner, J.5    Grant, S.F.6
  • 29
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
    • Wang K., Li M., Hakonarson H. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 2010, 38:e164.
    • (2010) Nucleic Acids Res , vol.38 , pp. e164
    • Wang, K.1    Li, M.2    Hakonarson, H.3
  • 30
    • 0031686611 scopus 로고    scopus 로고
    • Gathering STYX: phosphatase-like form predicts functions for unique protein-interaction domains
    • Wishart M.J., Dixon J.E. Gathering STYX: phosphatase-like form predicts functions for unique protein-interaction domains. Trends Biochem Sci 1998, 23:301-306.
    • (1998) Trends Biochem Sci , vol.23 , pp. 301-306
    • Wishart, M.J.1    Dixon, J.E.2


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