-
1
-
-
34648840354
-
Extraction and analysis of soluble inositol polyphosphates from yeast
-
Azevedo, C., and Saiardi, A. (2006). Extraction and analysis of soluble inositol polyphosphates from yeast. Nat. Protoc. 1: 2416–2422.
-
(2006)
Nat. Protoc
, vol.1
, pp. 2416-2422
-
-
Azevedo, C.1
Saiardi, A.2
-
2
-
-
75849158417
-
Inositol pyrophosphate mediated pyrophosphorylation of AP3B1 regulates HIV-1 Gag release
-
Azevedo, C., Burton, A., Ruiz-Mateos, E., Marsh, M., and Saiardi, A. (2009). Inositol pyrophosphate mediated pyrophosphorylation of AP3B1 regulates HIV-1 Gag release. Proc. Natl. Acad. Sci. USA 106: 21161–21166.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 21161-21166
-
-
Azevedo, C.1
Burton, A.2
Ruiz-Mateos, E.3
Marsh, M.4
Saiardi, A.5
-
3
-
-
78049396122
-
Synthesis of InsP7 by the Inositol Hexakisphosphate Kinase 1 (IP6K1
-
Azevedo, C., Burton, A., Bennett, M., Onnebo, S.M., and Saiardi, A. (2010). Synthesis of InsP7 by the Inositol Hexakisphosphate Kinase 1 (IP6K1). Methods Mol. Biol. 645: 73–85.
-
(2010)
Methods Mol. Biol
, vol.645
, pp. 73-85
-
-
Azevedo, C.1
Burton, A.2
Bennett, M.3
Onnebo, S.M.4
Saiardi, A.5
-
4
-
-
70849090308
-
Inositol pyrophosphates: Structure, enzymology and function
-
Barker, C.J., Illies, C., IGaboardi, G.C, and Berggren P.O. (2009). Inositol pyrophosphates: structure, enzymology and function. Cell. Mol. Life Sci. 66: 3851–3871.
-
(2009)
Cell. Mol. Life Sci
, vol.66
, pp. 3851-3871
-
-
Barker, C.J.1
Illies, C.2
Igaboardi, G.C.3
Berggren, P.O.4
-
5
-
-
84965061063
-
Fungi. Eumycota: Mushrooms, sac fungi, yeast, molds, rusts, smuts, etc
-
Blackwell, M., Vilgalys, R., James, T.Y., and Taylor, J.W. (2012). Fungi. Eumycota: mushrooms, sac fungi, yeast, molds, rusts, smuts, etc. In The Tree of Life Web Project, http://tolweb.org/.
-
(2012)
In the Tree of Life Web Project
-
-
Blackwell, M.1
Vilgalys, R.2
James, T.Y.3
Taylor, J.W.4
-
6
-
-
0025713327
-
Reversible inactivation of K+ channels of Vicia stomatal guard cells following the photolysis of caged inositol 1,4,5-trisphosphate
-
Blatt, M.R., Thiel, G., and Trentham, D.R. (1990). Reversible inactivation of K+ channels of Vicia stomatal guard cells following the photolysis of caged inositol 1,4,5-trisphosphate. Nature 346: 766–769.
-
(1990)
Nature
, vol.346
, pp. 766-769
-
-
Blatt, M.R.1
Thiel, G.2
Trentham, D.R.3
-
7
-
-
0029814788
-
Inositol phosphates in barley (Hordeum vulgare L.) aleurone tissue are stereochemically similar to the products of breakdown of InsP6 in vitro by wheat-bran phytase
-
Brearley, C.A., and Hanke, D.E. (1996). Inositol phosphates in barley (Hordeum vulgare L.) aleurone tissue are stereochemically similar to the products of breakdown of InsP6 in vitro by wheat-bran phytase. Biochem. J. 318: 279–286.
-
(1996)
Biochem. J
, vol.318
, pp. 279-286
-
-
Brearley, C.A.1
Hanke, D.E.2
-
8
-
-
0038459125
-
An Arabidopsis inositol 5-phosphatase gain-of-function alters abscisic acid signaling
-
Burnette, R.N., Gunesekera, B.M., and Gillaspy, G.E. (2003). An Arabidopsis inositol 5-phosphatase gain-of-function alters abscisic acid signaling. Plant Physiol. 132: 1011–1019.
-
(2003)
Plant Physiol
, vol.132
, pp. 1011-1019
-
-
Burnette, R.N.1
Gunesekera, B.M.2
Gillaspy, G.E.3
-
9
-
-
65549171402
-
Are inositol pyrophosphates signalling molecules
-
Burton, A., Hu, X., and Saiardi, A. (2009). Are inositol pyrophosphates signalling molecules? J. Cell. Physiol. 220: 8–15.
-
(2009)
J. Cell. Physiol
, vol.220
, pp. 8-15
-
-
Burton, A.1
Hu, X.2
Saiardi, A.3
-
10
-
-
84879326334
-
Synthesis of unsymmetric diphospho-inositol polyphosphates
-
Capolicchio, S., Thakor, D.T., Linden, A., and Jessen, H.J. (2013). Synthesis of unsymmetric diphospho-inositol polyphosphates. Angew. Chem. Int. Ed. Engl. 52: 6912–6916.
-
(2013)
Angew. Chem. Int. Ed. Engl
, vol.52
, pp. 6912-6916
-
-
Capolicchio, S.1
Thakor, D.T.2
Linden, A.3
Jessen, H.J.4
-
11
-
-
84906949509
-
Synthesis of densely phosphorylated bis-1,5-diphospho-myo-inositol tetrakisphosphate and its enantiomer by bidirectional P-anhydride formation. Angew. Chem. Int. Ed. Engl
-
Capolicchio, S., Wang, H., Thakor, D.T., Shears, S.B., and Jessen, H.J. (2014). Synthesis of densely phosphorylated bis-1,5-diphospho-myo-inositol tetrakisphosphate and its enantiomer by bidirectional P-anhydride formation. Angew. Chem. Int. Ed. Engl. 53: 9508–9511.
-
(2014)
Angew. Chem. Int. Ed. Engl
, vol.53
, pp. 9508-9511
-
-
Capolicchio, S.1
Wang, H.2
Thakor, D.T.3
Shears, S.B.4
Jessen, H.J.5
-
12
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17: 540–552.
-
(2000)
Mol. Biol. Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
13
-
-
80052293419
-
Inositol py-rophosphates as mammalian cell signals
-
re1
-
Chakraborty, A., Kim, S., and Snyder, S.H. (2011). Inositol py-rophosphates as mammalian cell signals. Sci. Signal. 4: re1.
-
(2011)
Sci. Signal
, vol.4
-
-
Chakraborty, A.1
Kim, S.2
Snyder, S.H.3
-
14
-
-
48249114464
-
An inositol polyphosphate 5-phosphatase functions in PHOTOTROPIN1 signaling in Arabidopis by altering cytosolic Ca2+
-
Chen, X., Lin, W.H., Wang, Y., Luan, S., and Xue, H.W. (2008). An inositol polyphosphate 5-phosphatase functions in PHOTOTROPIN1 signaling in Arabidopis by altering cytosolic Ca2+. Plant Cell 20: 353–366.
-
(2008)
Plant Cell
, vol.20
, pp. 353-366
-
-
Chen, X.1
Lin, W.H.2
Wang, Y.3
Luan, S.4
Xue, H.W.5
-
15
-
-
34547743829
-
The JAZ family of repressors is the missing link in jasmonate signalling
-
Chini, A., Fonseca, S., Fernández, G., Adie, B., Chico, J.M., Lorenzo, O., García-Casado, G., López-Vidriero, I., Lozano, F.M., Ponce, M.R., Micol, J.L., and Solano, R. (2007). The JAZ family of repressors is the missing link in jasmonate signalling. Nature 448: 666–671.
-
(2007)
Nature
, vol.448
, pp. 666-671
-
-
Chini, A.1
Fonseca, S.2
Fernández, G.3
Adie, B.4
Chico, J.M.5
Lorenzo, O.6
García-Casado, G.7
López-Vidriero, I.8
Lozano, F.M.9
Ponce, M.R.10
Micol, J.L.11
Solano, R.12
-
16
-
-
23844457959
-
Signal signature and transcriptome changes of Arabidopsis during pathogen and insect attack
-
De Vos, M., Van Oosten, V.R., Van Poecke, R.M., Van Pelt, J.A., Pozo, M.J., Mueller, M.J., Buchala, A.J., Métraux, J.P., Van Loon, L.C., Dicke, M., and Pieterse, C.M. (2005). Signal signature and transcriptome changes of Arabidopsis during pathogen and insect attack. Mol. Plant Microbe Interact. 18: 923–937.
-
(2005)
Mol. Plant Microbe Interact
, vol.18
, pp. 923-937
-
-
De Vos, M.1
Van Oosten, V.R.2
Van Poecke, R.M.3
Van Pelt, J.A.4
Pozo, M.J.5
Mueller, M.J.6
Buchala, A.J.7
Métraux, J.P.8
Van Loon, L.C.9
Dicke, M.10
Pieterse, C.M.11
-
17
-
-
84920798695
-
Two inositol hexakisphosphate kinases drive inositol pyrophosphate synthesis in plants
-
Desai, M., Rangarajan, P., Donahue, J.L., Williams, S.P., Land, E.S., Mandal, M.K., Phillippy, B.Q., Perera, I.Y., Raboy, V., and Gillaspy, G.E. (2014). Two inositol hexakisphosphate kinases drive inositol pyrophosphate synthesis in plants. Plant J. 80: 642–653.
-
(2014)
Plant J
, vol.80
, pp. 642-653
-
-
Desai, M.1
Rangarajan, P.2
Donahue, J.L.3
Williams, S.P.4
Land, E.S.5
Mandal, M.K.6
Phillippy, B.Q.7
Perera, I.Y.8
Raboy, V.9
Gillaspy, G.E.10
-
18
-
-
0037369356
-
Seed phosphorus and inositol phosphate phenotype of barley low phytic acid genotypes
-
Dorsch, J.A., Cook, A., Young, K.A., Anderson, J.M., Bauman, A.T., Volkmann, C.J., Murthy, P.P., and Raboy, V. (2003). Seed phosphorus and inositol phosphate phenotype of barley low phytic acid genotypes. Phytochemistry 62: 691–706.
-
(2003)
Phytochemistry
, vol.62
, pp. 691-706
-
-
Dorsch, J.A.1
Cook, A.2
Young, K.A.3
Erson, J.M.4
Bauman, A.T.5
Volkmann, C.J.6
Murthy, P.P.7
Raboy, V.8
-
19
-
-
40749150040
-
Inositol hexakisphosphate kinase products contain diphosphate and triphosphate groups
-
Draskovic, P., Saiardi, A., Bhandari, R., Burton, A., Ilc, G., Kovacevic, M., Snyder, S.H., and Podobnik, M. (2008). Inositol hexakisphosphate kinase products contain diphosphate and triphosphate groups. Chem. Biol. 15: 274–286.
-
(2008)
Chem. Biol
, vol.15
, pp. 274-286
-
-
Draskovic, P.1
Saiardi, A.2
Bhandari, R.3
Burton, A.4
Ilc, G.5
Kovacevic, M.6
Snyder, S.H.7
Podobnik, M.8
-
20
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368–376.
-
(1981)
J. Mol. Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
21
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
22
-
-
0033694225
-
Abscisic acid-induced changes in inositol metabolism in Spirodela polyrrhiza
-
Flores, S., and Smart, C.C. (2000). Abscisic acid-induced changes in inositol metabolism in Spirodela polyrrhiza. Planta 211: 823–832.
-
(2000)
Planta
, vol.211
, pp. 823-832
-
-
Flores, S.1
Smart, C.C.2
-
23
-
-
84885015081
-
The role of phosphoinositides and inositol phosphates in plant cell signaling
-
Gillaspy, G.E. (2013). The role of phosphoinositides and inositol phosphates in plant cell signaling. Adv. Exp. Med. Biol. 991: 141–157.
-
(2013)
Adv. Exp. Med. Biol
, vol.991
, pp. 141-157
-
-
Gillaspy, G.E.1
-
24
-
-
0025713332
-
Elevation of cy-toplasmic calcium by caged calcium or caged inositol triphosphate initiates stomatal closure
-
Gilroy, S., Read, N.D., and Trewavas, A.J. (1990). Elevation of cy-toplasmic calcium by caged calcium or caged inositol triphosphate initiates stomatal closure. Nature 346: 769–771.
-
(1990)
Nature
, vol.346
, pp. 769-771
-
-
Gilroy, S.1
Read, N.D.2
Trewavas, A.J.3
-
25
-
-
0141496283
-
A cell surface receptor mediates extracellular Ca2+ sensing in guard cells
-
Han, S., Tang, R., Anderson, L.K., Woerner, T.E., and Pei, Z.M. (2003). A cell surface receptor mediates extracellular Ca2+ sensing in guard cells. Nature 425: 196–200.
-
(2003)
Nature
, vol.425
, pp. 196-200
-
-
Han, S.1
Tang, R.2
Erson, L.K.3
Woerner, T.E.4
Pei, Z.M.5
-
26
-
-
84862158089
-
Synthesis of inositol phosphate ligands of plant hormone-receptor complexes: Pathways of inositol hexakisphosphate turnover
-
Hanke, D.E., Parmar, P.N., Caddick, S.E., Green, P., and Brearley, C.A. (2012). Synthesis of inositol phosphate ligands of plant hormone-receptor complexes: pathways of inositol hexakisphosphate turnover. Biochem. J. 444: 601–609.
-
(2012)
Biochem. J
, vol.444
, pp. 601-609
-
-
Hanke, D.E.1
Parmar, P.N.2
Caddick, S.E.3
Green, P.4
Brearley, C.A.5
-
27
-
-
44449179468
-
Plant immunity to insect herbivores. Annu
-
Howe, G.A., and Jander, G. (2008). Plant immunity to insect herbivores. Annu. Rev. Plant Biol. 59: 41–66.
-
(2008)
Rev. Plant Biol
, vol.59
, pp. 41-66
-
-
Howe, G.A.1
Jander, G.2
-
28
-
-
13744252890
-
MAFFT version 5: Improvement in accuracy of multiple sequence alignment
-
Katoh, K., Kuma, K., Toh, H., and Miyata, T. (2005). MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33: 511–518.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.2
Toh, H.3
Miyata, T.4
-
29
-
-
44349195100
-
COI1 is a critical component of a receptor for jasmo-nate and the bacterial virulence factor coronatine
-
Katsir, L., Schilmiller, A.L., Staswick, P.E., He, S.Y., and Howe, G.A. (2008). COI1 is a critical component of a receptor for jasmo-nate and the bacterial virulence factor coronatine. Proc. Natl. Acad. Sci. USA 105: 7100–7105.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 7100-7105
-
-
Katsir, L.1
Schilmiller, A.L.2
Staswick, P.E.3
He, S.Y.4
Howe, G.A.5
-
31
-
-
34250803478
-
The BRI1-associated kinase 1, BAK1, has a brassinolide-independent role in plant cell-death control
-
Kemmerling, B., et al. (2007). The BRI1-associated kinase 1, BAK1, has a brassinolide-independent role in plant cell-death control. Curr. Biol. 17: 1116–1122.
-
(2007)
Curr. Biol
, vol.17
, pp. 1116-1122
-
-
Kemmerling, B.1
-
32
-
-
0031279985
-
Calcium signalling in Arabidopsis thaliana responding to drought and salinity
-
Knight, H., Trewavas, A.J., and Knight, M.R. (1997). Calcium signalling in Arabidopsis thaliana responding to drought and salinity. Plant J. 12: 1067–1078.
-
(1997)
Plant J
, vol.12
, pp. 1067-1078
-
-
Knight, H.1
Trewavas, A.J.2
Knight, M.R.3
-
33
-
-
70749083848
-
AIR: A batch-oriented web program package for construction of super-matrices ready for phylogenomic analyses
-
Kumar, S., Skjaeveland, A., Orr, R.J.S., Enger, P., Ruden, T., Mevik, B.H., Burki, F., Botnen, A., and Shalchian-Tabrizi, K. (2009). AIR: A batch-oriented web program package for construction of super-matrices ready for phylogenomic analyses. BMC Bioinformatics 10: 357.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 357
-
-
Kumar, S.1
Skjaeveland, A.2
Orr, R.3
Enger, P.4
Ruden, T.5
Mevik, B.H.6
Burki, F.7
Botnen, A.8
Shalchian-Tabrizi, K.9
-
34
-
-
0034682494
-
Inositol hexakisphosphate is a physiological signal regulating the K+-inward rectifying conductance in guard cells
-
Lemtiri-Chlieh, F., MacRobbie, E.A., and Brearley, C.A. (2000). Inositol hexakisphosphate is a physiological signal regulating the K+-inward rectifying conductance in guard cells. Proc. Natl. Acad. Sci. USA 97: 8687–8692.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 8687-8692
-
-
Lemtiri-Chlieh, F.1
Macrobbie, E.A.2
Brearley, C.A.3
-
35
-
-
59449101103
-
Structural analysis and detection of biological inositol pyrophosphates reveal that the family of VIP/diphosphoinositol pentakisphosphate kinases are 1/3-kinases
-
Lin, H., Fridy, P.C., Ribeiro, A.A., Choi, J.H., Barma, D.K., Vogel, G., Falck, J.R., Shears, S.B., York, J.D., and Mayr, G.W. (2009). Structural analysis and detection of biological inositol pyrophosphates reveal that the family of VIP/diphosphoinositol pentakisphosphate kinases are 1/3-kinases. J. Biol. Chem. 284: 1863–1872.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 1863-1872
-
-
Lin, H.1
Fridy, P.C.2
Ribeiro, A.A.3
Choi, J.H.4
Barma, D.K.5
Vogel, G.6
Falck, J.R.7
Shears, S.B.8
York, J.D.9
Mayr, G.W.10
-
36
-
-
33646121760
-
Primary evidence for involvement of IP3 in heat-shock signal transduction in Arabidopsis
-
Liu, H.T., Gao, F., Cui, S.J., Han, J.L., Sun, D.Y., and Zhou, R.G. (2006). Primary evidence for involvement of IP3 in heat-shock signal transduction in Arabidopsis. Cell Res. 16: 394–400.
-
(2006)
Cell Res
, vol.16
, pp. 394-400
-
-
Liu, H.T.1
Gao, F.2
Cui, S.J.3
Han, J.L.4
Sun, D.Y.5
Zhou, R.G.6
-
37
-
-
65949094795
-
Inositol pyrophosphates and their unique metabolic complexity: Analysis by gel electrophoresis
-
Losito, O., Szijgyarto, Z., Resnick, A.C., and Saiardi, A. (2009). Inositol pyrophosphates and their unique metabolic complexity: analysis by gel electrophoresis. PLoS ONE 4: e5580.
-
(2009)
Plos ONE
, vol.4
-
-
Losito, O.1
Szijgyarto, Z.2
Resnick, A.C.3
Saiardi, A.4
-
38
-
-
0027456498
-
Turnover of inositol polyphosphate pyrophosphates in pancreatoma cells
-
Menniti, F.S., Miller, R.N., Putney, J.W., Jr., and Shears, S.B. (1993). Turnover of inositol polyphosphate pyrophosphates in pancreatoma cells. J. Biol. Chem. 268: 3850–3856.
-
(1993)
J. Biol. Chem
, vol.268
, pp. 3850-3856
-
-
Menniti, F.S.1
Miller, R.N.2
Putney, J.W.3
Shears, S.B.4
-
39
-
-
79953013362
-
Jasmonic acid perception by COI1 involves inositol poly-phosphates in Arabidopsis thaliana
-
Mosblech, A., Thurow, C., Gatz, C., Feussner, I., and Heilmann, I. (2011). Jasmonic acid perception by COI1 involves inositol poly-phosphates in Arabidopsis thaliana. Plant J. 65: 949–957.
-
(2011)
Plant J
, vol.65
, pp. 949-957
-
-
Mosblech, A.1
Thurow, C.2
Gatz, C.3
Feussner, I.4
Heilmann, I.5
-
40
-
-
44649140833
-
Phosphoinositide and inositolpolyphosphate signalling in defense responses of Arabidopsis thaliana challenged by mechanical wounding
-
Mosblech, A., König, S., Stenzel, I., Grzeganek, P., Feussner, I., and Heilmann, I. (2008). Phosphoinositide and inositolpolyphosphate signalling in defense responses of Arabidopsis thaliana challenged by mechanical wounding. Mol. Plant 1: 249–261.
-
(2008)
Mol. Plant
, vol.1
, pp. 249-261
-
-
Mosblech, A.1
König, S.2
Stenzel, I.3
Grzeganek, P.4
Feussner, I.5
Heilmann, I.6
-
41
-
-
34147108005
-
A conserved family of enzymes that phosphorylate inositol hexaki-sphosphate
-
Mulugu, S., Bai, W., Fridy, P.C., Bastidas, R.J., Otto, J.C., Dollins, D.E., Haystead, T.A., Ribeiro, A.A., and York, J.D. (2007). A conserved family of enzymes that phosphorylate inositol hexaki-sphosphate. Science 316: 106-109.
-
(2007)
Science
, vol.316
, pp. 106-109
-
-
Mulugu, S.1
Bai, W.2
Fridy, P.C.3
Bastidas, R.J.4
Otto, J.C.5
Dollins, D.E.6
Haystead, T.A.7
Ribeiro, A.A.8
York, J.D.9
-
42
-
-
77951009331
-
Osmotic stress-induced phosphoinositide and inositol phosphate signalling in plants
-
Munnik, T., and Vermeer, J.E. (2010). Osmotic stress-induced phosphoinositide and inositol phosphate signalling in plants. Plant Cell Environ. 33: 655-669.
-
(2010)
Plant Cell Environ
, vol.33
, pp. 655-669
-
-
Munnik, T.1
Vermeer, J.E.2
-
43
-
-
80053906707
-
Green light for polyphosphoinositide signals in plants
-
Munnik, T., and Nielsen, E. (2011). Green light for polyphosphoinositide signals in plants. Curr. Opin. Plant Biol. 14: 489-497.
-
(2011)
Curr. Opin. Plant Biol
, vol.14
, pp. 489-497
-
-
Munnik, T.1
Nielsen, E.2
-
44
-
-
58149240230
-
A role for inositol hexakisphosphate in the maintenance of basal resistance to plant pathogens
-
Murphy, A.M., Otto, B., Brearley, C.A., Carr, J.P., and Hanke, D.E. (2008). A role for inositol hexakisphosphate in the maintenance of basal resistance to plant pathogens. Plant J. 56: 638-652.
-
(2008)
Plant J
, vol.56
, pp. 638-652
-
-
Murphy, A.M.1
Otto, B.2
Brearley, C.A.3
Carr, J.P.4
Hanke, D.E.5
-
45
-
-
70349762073
-
Inositol pyrophosphates modulate hydrogen peroxide signalling
-
Onnebo, S.M., and Saiardi, A. (2009). Inositol pyrophosphates modulate hydrogen peroxide signalling. Biochem. J. 423: 109-118.
-
(2009)
Biochem. J
, vol.423
, pp. 109-118
-
-
Onnebo, S.M.1
Saiardi, A.2
-
46
-
-
84863097569
-
Inositol phosphate kinase Vip1p interacts with histone chaperone Asf1p in Saccharomyces cerevisiae
-
Osada, S., Kageyama, K., Ohnishi, Y., Nishikawa, J., Nishihara, T., and Imagawa, M. (2012). Inositol phosphate kinase Vip1p interacts with histone chaperone Asf1p in Saccharomyces cerevisiae. Mol. Biol. Rep. 39: 4989-4996.
-
(2012)
Mol. Biol. Rep
, vol.39
, pp. 4989-4996
-
-
Osada, S.1
Kageyama, K.2
Ohnishi, Y.3
Nishikawa, J.4
Nishihara, T.5
Imagawa, M.6
-
47
-
-
67449093365
-
Characterization of a selective inhibitor of inositol hexakisphosphate kinases: Use in defining biological roles and metabolic relationships of inositol pyrophosphates
-
Padmanabhan, U., Dollins, D.E., Fridy, P.C., York, J.D., and Downes, C.P. (2009). Characterization of a selective inhibitor of inositol hexakisphosphate kinases: use in defining biological roles and metabolic relationships of inositol pyrophosphates. J. Biol. Chem. 284: 10571-10582.
-
(2009)
J. Biol. Chem
, vol.284
, pp. 10571-10582
-
-
Padmanabhan, U.1
Dollins, D.E.2
Fridy, P.C.3
York, J.D.4
Downes, C.P.5
-
48
-
-
57749117254
-
Transgenic Arabidopsis plants expressing the type 1 inositol 5-phosphatase exhibit increased drought tolerance and altered abscisic acid signaling
-
Perera, I.Y., Hung, C.Y., Moore, CD., Stevenson-Paulik, J., and Boss, W.F. (2008). Transgenic Arabidopsis plants expressing the type 1 inositol 5-phosphatase exhibit increased drought tolerance and altered abscisic acid signaling. Plant Cell 20: 2876-2893.
-
(2008)
Plant Cell
, vol.20
, pp. 2876-2893
-
-
Perera, I.Y.1
Hung, C.Y.2
Moore, C.D.3
Stevenson-Paulik, J.4
Boss, W.F.5
-
49
-
-
36549038968
-
Plant interactions with microbes and insects: From molecular mechanisms to ecology
-
Pieterse, CM., and Dicke, M. (2007). Plant interactions with microbes and insects: from molecular mechanisms to ecology. Trends Plant Sci. 12: 564-569.
-
(2007)
Trends Plant Sci
, vol.12
, pp. 564-569
-
-
Pieterse, C.M.1
Dicke, M.2
-
50
-
-
84865846822
-
Hormonal modulation of plant immunity
-
Pieterse, CM., Van der Does, D., Zamioudis, C, Leon-Reyes, A., and Van Wees, S.C (2012). Hormonal modulation of plant immunity. Annu. Rev. Cell Dev. Biol. 28: 489-521.
-
(2012)
Annu. Rev. Cell Dev. Biol
, vol.28
, pp. 489-521
-
-
Pieterse, C.M.1
Van Der Does, D.2
Zamioudis, C.3
Leon-Reyes, A.4
Van Wees, S.C.5
-
51
-
-
84907588726
-
The Vip1 inositol polyphosphate kinase family regulates polarized growth and modulates the microtubule cytoskeleton in fungi
-
Pöhlmann, J., Risse, C, Seidel, C, Pohlmann, T., Jakopec, V., Walla, E., Ramrath, P., Takeshita, N., Baumann, S., Feldbrügge, M., Fischer, R., and Fleig, U. (2014). The Vip1 inositol polyphosphate kinase family regulates polarized growth and modulates the microtubule cytoskeleton in fungi. PLoS Genet. 10: e1004586.
-
(2014)
Plos Genet
, pp. 10
-
-
Pöhlmann, J.1
Risse, C.2
Seidel, C.3
Pohlmann, T.4
Jakopec, V.5
Walla, E.6
Ramrath, P.7
Takeshita, N.8
Baumann, S.9
Feldbrügge, M.10
Fischer, R.11
Fleig, U.12
-
52
-
-
84898022580
-
Inositol pyrophosphates mediate the DNA-PK/ ATM-p53 cell death pathway by regulating CK2 phosphorylation of Tti1/Tel2
-
Rao, F., et al. (2014). Inositol pyrophosphates mediate the DNA-PK/ ATM-p53 cell death pathway by regulating CK2 phosphorylation of Tti1/Tel2. Mol. Cell 54: 119-132.
-
(2014)
Mol. Cell
, vol.54
, pp. 119-132
-
-
Rao, F.1
-
53
-
-
0032538976
-
A novel context for the ‘MutT’ module, a guardian of cell integrity, in a diphosphoino-sitol polyphosphate phosphohydrolase
-
Safrany, ST., Caffrey, J.J., Yang, X., Bembenek, M.E., Moyer, M.B., Burkhart, W.A., and Shears, S.B. (1998). A novel context for the ‘MutT’ module, a guardian of cell integrity, in a diphosphoino-sitol polyphosphate phosphohydrolase. EMBO J. 17: 6599-6607.
-
(1998)
EMBO J
, vol.17
, pp. 6599-6607
-
-
Safrany, S.T.1
Caffrey, J.J.2
Yang, X.3
Bembenek, M.E.4
Moyer, M.B.5
Burkhart, W.A.6
Shears, S.B.7
-
54
-
-
0034637548
-
The inositol hexakisphosphate kinase family. Catalytic flexibility and function in yeast vacuole biogenesis
-
Saiardi, A., Caffrey, J.J., Snyder, S.H., and Shears, S.B. (2000a). The inositol hexakisphosphate kinase family. Catalytic flexibility and function in yeast vacuole biogenesis. J. Biol. Chem. 275: 24686-24692.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 24686-24692
-
-
Saiardi, A.1
Caffrey, J.J.2
Snyder, S.H.3
Shears, S.B.4
-
55
-
-
0033975636
-
Inositol polyphosphate multikinase (ArgRIII) determines nuclear mRNA export in Saccharomyces cerevisiae
-
Saiardi, A., Caffrey, J.J., Snyder, S.H., and Shears, S.B. (2000b). Inositol polyphosphate multikinase (ArgRIII) determines nuclear mRNA export in Saccharomyces cerevisiae. FEBS Lett. 468: 28-32.
-
(2000)
FEBS Lett
, vol.468
, pp. 28-32
-
-
Saiardi, A.1
Caffrey, J.J.2
Snyder, S.H.3
Shears, S.B.4
-
56
-
-
0035914367
-
Identification and characterization of a novel inositol hexakisphosphate kinase
-
Saiardi, A., Nagata, E., Luo, H.R., Snowman, A.M., and Snyder, S.H. (2001). Identification and characterization of a novel inositol hexakisphosphate kinase. J. Biol. Chem. 276: 39179-39185.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 39179-39185
-
-
Saiardi, A.1
Nagata, E.2
Luo, H.R.3
Snowman, A.M.4
Snyder, S.H.5
-
57
-
-
78549274705
-
Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor
-
Sheard, L.B., etal. (2010). Jasmonate perception by inositol-phosphate-potentiated COI1-JAZ co-receptor. Nature 468: 400–405.
-
(2010)
Nature
, vol.468
, pp. 400-405
-
-
Sheard, L.B.1
-
58
-
-
67650802345
-
Diphosphoinositol polyphosphates: Metabolic messengers? Mol
-
Shears, S.B. (2009). Diphosphoinositol polyphosphates: metabolic messengers? Mol. Pharmacol. 76: 236-252.
-
(2009)
Pharmacol
, vol.76
, pp. 236-252
-
-
Shears, S.B.1
-
59
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis, A. (2006a). RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
61
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML Web servers
-
Stamatakis, A., Hoover, P., and Rougemont, J. (2008). A rapid bootstrap algorithm for the RAxML Web servers. Syst. Biol. 57: 758–771.
-
(2008)
Syst. Biol
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
62
-
-
0025762374
-
Myo-inositol pentakisphosphates. Structure, biological occurrence and phosphorylation to myo-inositol hexakisphosphate
-
Stephens, L.R., Hawkins, P.T., Stanley, A.F., Moore, T., Poyner, D.R., Morris, P.J., Hanley, M.R., Kay, R.R., and Irvine, R.F. (1991). Myo-inositol pentakisphosphates. Structure, biological occurrence and phosphorylation to myo-inositol hexakisphosphate. Biochem. J. 275: 485–499.
-
(1991)
Biochem. J
, vol.275
, pp. 485-499
-
-
Stephens, L.R.1
Hawkins, P.T.2
Stanley, A.F.3
Moore, T.4
Poyner, D.R.5
Morris, P.J.6
Hanley, M.R.7
Kay, R.R.8
Irvine, R.F.9
-
63
-
-
24644452029
-
Generation of phytate-free seeds in Arabidopsis through disruption of inositol polyphosphate kinases
-
Stevenson-Paulik, J., Bastidas, R.J., Chiou, S.T., Frye, R.A., and York, J.D. (2005). Generation of phytate-free seeds in Arabidopsis through disruption of inositol polyphosphate kinases. Proc. Natl. Acad. Sci. USA 102: 12612–12617.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 12612-12617
-
-
Stevenson-Paulik, J.1
Bastidas, R.J.2
Chiou, S.T.3
Frye, R.A.4
York, J.D.5
-
64
-
-
0020643801
-
Release of Ca2+ from a nonmitochondrial intracellular store in pancreatic acinar cells by inositol-1,4,5-trisphosphate
-
Streb, H., Irvine, R.F., Berridge, M.J., and Schulz, I. (1983). Release of Ca2+ from a nonmitochondrial intracellular store in pancreatic acinar cells by inositol-1,4,5-trisphosphate. Nature 306: 67–69.
-
(1983)
Nature
, vol.306
, pp. 67-69
-
-
Streb, H.1
Irvine, R.F.2
Berridge, M.J.3
Schulz, I.4
-
65
-
-
81055137383
-
Influence of inositol pyrophosphates on cellular energy dynamics
-
Szijgyarto, Z., Garedew, A., Azevedo, C., and Saiardi, A. (2011). Influence of inositol pyrophosphates on cellular energy dynamics. Science 334: 802–805.
-
(2011)
Science
, vol.334
, pp. 802-805
-
-
Szijgyarto, Z.1
Garedew, A.2
Azevedo, C.3
Saiardi, A.4
-
66
-
-
34247219263
-
Mechanism of auxin perception by the TIR1 ubiquitin ligase
-
Tan, X., Calderon-Villalobos, L.I., Sharon, M., Zheng, C., Robinson, C.V., Estelle, M., and Zheng, N. (2007). Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature 446: 640–645.
-
(2007)
Nature
, vol.446
, pp. 640-645
-
-
Tan, X.1
Calderon-Villalobos, L.I.2
Sharon, M.3
Zheng, C.4
Robinson, C.V.5
Estelle, M.6
Zheng, N.7
-
67
-
-
34547727206
-
JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling
-
Thines, B., Katsir, L., Melotto, M., Niu, Y., Mandaokar, A., Liu, G., Nomura, K., He, S.Y., Howe, G.A., and Browse, J. (2007). JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling. Nature 448: 661–665.
-
(2007)
Nature
, vol.448
, pp. 661-665
-
-
Thines, B.1
Katsir, L.2
Melotto, M.3
Niu, Y.4
Mandaokar, A.5
Liu, G.6
Nomura, K.7
He, S.Y.8
Howe, G.A.9
Browse, J.10
-
68
-
-
84886385133
-
Bioassays for assessing jasmonate-dependent defenses triggered by pathogens, herbivorous insects, or beneficial rhizobacteria
-
Van Wees, S.C., Van Pelt, J.A., Bakker, P.A., and Pieterse, C.M. (2013). Bioassays for assessing jasmonate-dependent defenses triggered by pathogens, herbivorous insects, or beneficial rhizobacteria. Methods Mol. Biol. 1011: 35–49.
-
(2013)
Methods Mol. Biol
, vol.1011
, pp. 35-49
-
-
Van Wees, S.C.1
Van Pelt, J.A.2
Bakker, P.A.3
Pieterse, C.M.4
-
69
-
-
84857250448
-
Rewiring of the jasmonate signaling pathway in Arabidopsis during insect her-bivory
-
Verhage, A., Vlaardingerbroek, I., Raaymakers, C., Van Dam, N.M., Dicke, M., Van Wees, S.C., and Pieterse, C.M. (2011). Rewiring of the jasmonate signaling pathway in Arabidopsis during insect her-bivory. Front. Plant Sci. 2: 47.
-
(2011)
Front. Plant Sci
, vol.2
, pp. 47
-
-
Verhage, A.1
Vlaardingerbroek, I.2
Raaymakers, C.3
Van Dam, N.M.4
Dicke, M.5
Van Wees, S.C.6
Pieterse, C.M.7
-
70
-
-
84901005439
-
Onset of herbivore-induced resistance in systemic tissue primed for jasmonate-dependent defenses is activated by abscisic acid
-
Vos, I.A., Verhage, A., Schuurink, R.C., Watt, L.G., Pieterse, C.M.J., and Van Wees, S.C.M. (2013). Onset of herbivore-induced resistance in systemic tissue primed for jasmonate-dependent defenses is activated by abscisic acid. Front. Plant Sci. 4: 539.
-
(2013)
Front. Plant Sci
, vol.4
, pp. 539
-
-
Vos, I.A.1
Verhage, A.2
Schuurink, R.C.3
Watt, L.G.4
Pieterse, C.5
Van Wees, S.6
-
71
-
-
83655198346
-
Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding
-
Wang, H., Falck, J.R., Hall, T.M., and Shears, S.B. (2012). Structural basis for an inositol pyrophosphate kinase surmounting phosphate crowding. Nat. Chem. Biol. 8: 111–116.
-
(2012)
Nat. Chem. Biol
, vol.8
, pp. 111-116
-
-
Wang, H.1
Falck, J.R.2
Hall, T.M.3
Shears, S.B.4
-
72
-
-
84861352431
-
Inositol polyphosphate 5-phosphatase-controlled Ins(1,4,5)P3/Ca2+ is crucial for maintaining pollen dormancy and regulating early germination of pollen
-
Wang, Y., Chu, Y.J., and Xue, H.W. (2012). Inositol polyphosphate 5-phosphatase-controlled Ins(1,4,5)P3/Ca2+ is crucial for maintaining pollen dormancy and regulating early germination of pollen. Development 139: 2221–2233.
-
(2012)
Development
, vol.139
, pp. 2221-2233
-
-
Wang, Y.1
Chu, Y.J.2
Xue, H.W.3
-
73
-
-
70349784227
-
The role of Arabidopsis 5PTase13 in root gravitropism through modulation of vesicle trafficking
-
Wang, Y., Lin, W.H., Chen, X., and Xue, H.W. (2009). The role of Arabidopsis 5PTase13 in root gravitropism through modulation of vesicle trafficking. Cell Res. 19: 1191–1204.
-
(2009)
Cell Res
, vol.19
, pp. 1191-1204
-
-
Wang, Y.1
Lin, W.H.2
Chen, X.3
Xue, H.W.4
-
74
-
-
84869441865
-
Synthesis and biological actions of diphosphoinositol phosphates (inositol pyrophosphates), regulators of cell homeostasis
-
Wundenberg, T., and Mayr, G.W. (2012). Synthesis and biological actions of diphosphoinositol phosphates (inositol pyrophosphates), regulators of cell homeostasis. Biol. Chem. 393: 979–998.
-
(2012)
Biol. Chem
, vol.393
, pp. 979-998
-
-
Wundenberg, T.1
Mayr, G.W.2
-
75
-
-
84875528580
-
The Arabidopsis F-box protein CORONATINE INSENSITIVE1 is stabilized by SCFCOI1 and degraded via the 26S proteasome pathway
-
Yan, J., Li, H., Li, S., Yao, R., Deng, H., Xie, Q., and Xie, D. (2013). The Arabidopsis F-box protein CORONATINE INSENSITIVE1 is stabilized by SCFCOI1 and degraded via the 26S proteasome pathway. Plant Cell 25: 486–498.
-
(2013)
Plant Cell
, vol.25
, pp. 486-498
-
-
Yan, J.1
Li, H.2
Li, S.3
Yao, R.4
Deng, H.5
Xie, Q.6
Xie, D.7
-
76
-
-
0027132974
-
Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites
-
Yang, Z. (1993). Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Mol. Biol. Evol. 10: 1396–1401.
-
(1993)
Mol. Biol. Evol
, vol.10
, pp. 1396-1401
-
-
Yang, Z.1
-
77
-
-
33745244227
-
Regulation of nuclear processes by inositol poly-phosphates
-
York, J.D. (2006). Regulation of nuclear processes by inositol poly-phosphates. Biochim. Biophys. Acta 1761: 552–559.
-
(2006)
Biochim. Biophys. Acta
, vol.1761
, pp. 552-559
-
-
York, J.D.1
-
78
-
-
79958232041
-
Inositol trisphosphate-induced Ca2+ signaling modulates auxin transport and PIN polarity
-
Zhang, J., et al. (2011). Inositol trisphosphate-induced Ca2+ signaling modulates auxin transport and PIN polarity. Dev. Cell 20: 855–866.
-
(2011)
Dev. Cell
, vol.20
, pp. 855-866
-
-
Zhang, J.1
|