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Volumn 9, Issue 5, 2015, Pages 1076-1092

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities

Author keywords

[No Author keywords available]

Indexed keywords

ABUNDANCE; ADAPTATION; GENE EXPRESSION; GENETIC VARIATION; GENOME; MICROBIAL COMMUNITY; THERMOCLINE;

EID: 84928582594     PISSN: 17517362     EISSN: 17517370     Source Type: Journal    
DOI: 10.1038/ismej.2014.198     Document Type: Article
Times cited : (82)

References (68)
  • 1
    • 84862630738 scopus 로고    scopus 로고
    • Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic
    • Allen LZ, Allen EE, Badger JH, McCrow JP, Paulsen IT, Elbourne LDH et al. (2012). Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic. ISME J 6: 1403-1414
    • (2012) ISME J , vol.6 , pp. 1403-1414
    • Allen, L.Z.1    Allen, E.E.2    Badger, J.H.3    McCrow, J.P.4    Paulsen, I.T.5    Elbourne, L.D.H.6
  • 2
    • 0027130098 scopus 로고
    • Ultrastructure and 18S rRNA gene sequence for Pelagomonas calceolata gen et sp nov and the description of a new algal class, the Pelagophyceae classis nov
    • Andersen RA, Suanders GW, Paskind MP, Sexton JP. (1993). Ultrastructure and 18S rRNA gene sequence for Pelagomonas calceolata gen. et sp. nov. and the description of a new algal class, the Pelagophyceae classis nov. J Phycol 29: 701-715
    • (1993) J Phycol , vol.29 , pp. 701-715
    • Andersen, R.A.1    Suanders, G.W.2    Paskind, M.P.3    Sexton, J.P.4
  • 4
    • 84928585204 scopus 로고    scopus 로고
    • Spatial and temporal variability of phytoplankton pigment distributions in the central equatorial Pacific Ocean
    • Bidigare RR, Ondrusek ME. (1996). Spatial and temporal variability of phytoplankton pigment distributions in the central equatorial Pacific Ocean. Deep-Sea Res II 48: 1837-1863
    • (1996) Deep-Sea Res II , vol.48 , pp. 1837-1863
    • Bidigare, R.R.1    Ondrusek, M.E.2
  • 6
    • 0141566416 scopus 로고    scopus 로고
    • Phycoerythrin-containing picoplankton in the Southern California Bight
    • Collier JL, Palenik B. 2003). Phycoerythrin-containing picoplankton in the Southern California Bight. Deep-Sea Res II 50 2405-2422
    • (2003) Deep-Sea Res II , vol.50 , pp. 2405-2422
    • Collier, J.L.1    Palenik, B.2
  • 7
    • 4644345295 scopus 로고    scopus 로고
    • Geochemical rate-RNA integration study: Ribulose-1, 5-bisphosphate carboxylase/oxygenase gene transcription and photosynthetic capacity of planktonic photoautotrophs
    • Corredor JE, Wawrik B, Paul JH, Tran H, Kerkhof L, Lopez JM et al. (2004). Geochemical rate-RNA integration study: ribulose-1, 5-bisphosphate carboxylase/oxygenase gene transcription and photosynthetic capacity of planktonic photoautotrophs. Appl Environ Microbiol 70: 5459-5468
    • (2004) Appl Environ Microbiol , vol.70 , pp. 5459-5468
    • Corredor, J.E.1    Wawrik, B.2    Paul, J.H.3    Tran, H.4    Kerkhof, L.5    Lopez, J.M.6
  • 8
    • 31544483932 scopus 로고    scopus 로고
    • Community genomics among stratified microbial assemblages in the ocean's interior
    • DeLong EF, Preston CM, Mincer T, Rich V, Hallam SJ, Frigaard N et al. (2006). Community genomics among stratified microbial assemblages in the ocean's interior. Science 311: 496-503.
    • (2006) Science , vol.311 , pp. 496-503
    • Delong, E.F.1    Preston, C.M.2    Mincer, T.3    Rich, V.4    Hallam, S.J.5    Frigaard, N.6
  • 9
    • 84861342496 scopus 로고    scopus 로고
    • Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
    • Dupont CL, Rusch D.B. Yooseph S. Lombardo M-J. Richter R.A. Valas R. et al. 2012 Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage ISME J 6 1186-1199
    • (2012) ISME J , vol.6 , pp. 1186-1199
    • Dupont, C.L.1    Rusch, D.B.2    Yooseph, S.3    Lombardo, M.-J.4    Richter, R.A.5    Valas, R.6
  • 10
    • 80055082271 scopus 로고    scopus 로고
    • Accelerated profile HMM searches
    • Eddy SR. (2011). Accelerated profile HMM searches. PLoS Comput Biol 7: e1002195
    • (2011) PLoS Comput Biol , vol.7 , pp. e1002195
    • Eddy, S.R.1
  • 11
    • 0018730120 scopus 로고
    • Particulate organic matter flux and planktonic new production in the deep ocean
    • Eppley RM, Peterson BJ. (1979). Particulate organic matter flux and planktonic new production in the deep ocean. Nature 282: 677-680
    • (1979) Nature , vol.282 , pp. 677-680
    • Eppley, R.M.1    Peterson, B.J.2
  • 14
    • 84891160721 scopus 로고    scopus 로고
    • Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone
    • Ganesh S, Parris DJ, DeLong EF, Stewart FJ. (2014). Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone. ISME J 8: 187-211
    • (2014) ISME J , vol.8 , pp. 187-211
    • Ganesh, S.1    Parris, D.J.2    Delong, E.F.3    Stewart, F.J.4
  • 15
    • 77956095592 scopus 로고    scopus 로고
    • Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing
    • Ghai R, Martin-Cuadrado A, Molto AG, Heredia IG, Cabrera R, Martin J et al. (2010). Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing. ISME J 4: 1154-1166
    • (2010) ISME J , vol.4 , pp. 1154-1166
    • Ghai, R.1    Martin-Cuadrado, A.2    Molto, A.G.3    Heredia, I.G.4    Cabrera, R.5    Martin, J.6
  • 16
    • 79951810312 scopus 로고    scopus 로고
    • Quantitative analysis of a deeply sequenced marine microbial metatranscriptome
    • Gifford SM, Sharma S, Rinta-Kanto JM, Moran MA. (2011). Quantitative analysis of a deeply sequenced marine microbial metatranscriptome. ISME J 5: 461-472
    • (2011) ISME J , vol.5 , pp. 461-472
    • Gifford, S.M.1    Sharma, S.2    Rinta-Kanto, J.M.3    Moran, M.A.4
  • 17
    • 84872981638 scopus 로고    scopus 로고
    • Expression patterns reveal niche differentiation in a marine microbial assemblage
    • Gifford SM, Sharma S, Booth M, Moran MA. (2013). Expression patterns reveal niche differentiation in a marine microbial assemblage. ISME J 7: 281-298
    • (2013) ISME J , vol.7 , pp. 281-298
    • Gifford, S.M.1    Sharma, S.2    Booth, M.3    Moran, M.A.4
  • 18
    • 84856720680 scopus 로고    scopus 로고
    • The structure of marine phytoplankton communities-patterns, rules, and mechanisms
    • Goericke R. (2011). The structure of marine phytoplankton communities-patterns, rules, and mechanisms. Cal-COFI Rep 52: 182-197
    • (2011) Cal-COFI Rep , vol.52 , pp. 182-197
    • Goericke, R.1
  • 21
    • 80052050890 scopus 로고    scopus 로고
    • The origins and evolution of freeze-etch electron microscopy
    • Heuser JE. (2011). The origins and evolution of freeze-etch electron microscopy. J Electron Microsc 60: S3-S29
    • (2011) J Electron Microsc , vol.60 , pp. S3-S29
    • Heuser, J.E.1
  • 22
    • 84871879265 scopus 로고    scopus 로고
    • Relationship between abundance and specific activity of bacterioplankton in open ocean surface waters
    • Hunt DE, Lin Y, Church MJ, Karl DM, Tringe SG, Izzo LK et al. (2013). Relationship between abundance and specific activity of bacterioplankton in open ocean surface waters. Appl Environ Microbiol 79: 177-184
    • (2013) Appl Environ Microbiol , vol.79 , pp. 177-184
    • Hunt, D.E.1    Lin, Y.2    Church, M.J.3    Karl, D.M.4    Tringe, S.G.5    Izzo, L.K.6
  • 24
    • 34948835186 scopus 로고    scopus 로고
    • Phytoplankton carbon fixation gene (RuBisCO) transcripts and air-sea CO2 flux in the Mississippi River plume
    • John DE, Wang ZA, Liu X, Byrne RH, Corredor JE, Lopez JM et al. (2007). Phytoplankton carbon fixation gene (RuBisCO) transcripts and air-sea CO2 flux in the Mississippi River plume. ISME J 1: 517-531
    • (2007) ISME J , vol.1 , pp. 517-531
    • John, D.E.1    Wang, Z.A.2    Liu, X.3    Byrne, R.H.4    Corredor, J.E.5    Lopez, J.M.6
  • 25
    • 33645216333 scopus 로고    scopus 로고
    • Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients
    • Johnson ZI, Zinser ER, Coe A, McNulty NP, Woodward EMS, Chisholm SW. (2006). Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients. Science 311: 1737-1740
    • (2006) Science , vol.311 , pp. 1737-1740
    • Johnson, Z.I.1    Zinser, E.R.2    Coe, A.3    McNulty, N.P.4    Woodward, E.M.S.5    Chisholm, S.W.6
  • 26
    • 84858983547 scopus 로고    scopus 로고
    • KEGG for integration and interpretation of large-scale molecular data sets
    • Kanehisa M, Goto S, Sato Y, Furumichi M, Tanabe M. (2011). KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res 40: D109-D114
    • (2011) Nucleic Acids Res , vol.40 , pp. D109-D114
    • Kanehisa, M.1    Goto, S.2    Sato, Y.3    Furumichi, M.4    Tanabe, M.5
  • 27
    • 84875619226 scopus 로고    scopus 로고
    • MAFFT multiple sequence alignment software version 7: Improvements in performance and usability
    • Katoh K, Standley DM. (2013). MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30: 772-780
    • (2013) Mol Biol Evol , vol.30 , pp. 772-780
    • Katoh, K.1    Standley, D.M.2
  • 28
    • 84903286893 scopus 로고    scopus 로고
    • The marine microbial eukaryote transcriptome sequencing project (mmetsp): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing
    • Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA et al. (2014). The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing.". PLoS Biol 12: e1001889
    • (2014) PLoS Biol , vol.12 , pp. e1001889
    • Keeling, P.J.1    Burki, F.2    Wilcox, H.M.3    Allam, B.4    Allen, E.E.5    Amaral-Zettler, L.A.6
  • 30
    • 84871274042 scopus 로고    scopus 로고
    • The metatranscriptome of a deep-sea hydrothermal vent plume is dominated by water column methanotrophs and lithotrophs
    • Lesniewski RA, Jain S, Anantharaman K, Schloss PD, Dick GJ. (2012). The metatranscriptome of a deep-sea hydrothermal vent plume is dominated by water column methanotrophs and lithotrophs. ISME J 6: 2257-2268
    • (2012) ISME J , vol.6 , pp. 2257-2268
    • Lesniewski, R.A.1    Jain, S.2    Anantharaman, K.3    Schloss, P.D.4    Dick, G.J.5
  • 31
    • 79952045634 scopus 로고    scopus 로고
    • The green ribbon: Multiscale physical contol of phytoplankton productivity and community structure over a narrow continental shelf
    • Lucas AJ, Dupont CL, Tai V, Largier JL, Palenik B, Franks PJS. (2011). The green ribbon: multiscale physical contol of phytoplankton productivity and community structure over a narrow continental shelf. Limnol Oceanogr 56: 611-626
    • (2011) Limnol Oceanogr , vol.56 , pp. 611-626
    • Lucas, A.J.1    Dupont, C.L.2    Tai, V.3    Largier, J.L.4    Palenik, B.5    Pjs, F.6
  • 33
    • 34047204714 scopus 로고    scopus 로고
    • Cytochrome c oxidase as a cause of variation in oxygen uptake rates among vegetables
    • Makino Y, Ichimura M, Kawagoe Y, Oshita S. (2007). Cytochrome c oxidase as a cause of variation in oxygen uptake rates among vegetables. J Am Soc Hortic Sci 132: 239-245
    • (2007) J Am Soc Hortic Sci , vol.132 , pp. 239-245
    • Makino, Y.1    Ichimura, M.2    Kawagoe, Y.3    Oshita, S.4
  • 35
    • 77958610660 scopus 로고    scopus 로고
    • Pplacer: Linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
    • Matsen FA, Kodner RB, Armbrust EV. (2010). pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree. BMC Bioinformatics 11: 538
    • (2010) BMC Bioinformatics , vol.11 , pp. 538
    • Matsen, F.A.1    Kodner, R.B.2    Armbrust, E.V.3
  • 36
    • 77956095453 scopus 로고    scopus 로고
    • Metagenomic sequencing on an in-vitro-simulated microbial community
    • Morgan JL, Darling AE, Eisen JA. (2010). Metagenomic sequencing on an in-vitro-simulated microbial community. PLoS One 5: e10209
    • (2010) PLoS One , vol.5 , pp. e10209
    • Morgan, J.L.1    Darling, A.E.2    Eisen, J.A.3
  • 37
    • 84859994630 scopus 로고    scopus 로고
    • Basin-scale patterns in the abundances of SAR11 subclades, marine actinobacteria (OM1), members of the roseobacter clade and OCS116 in the South Atlantic
    • Morris RM, Frazar CD, Carlson CA. (2012). Basin-scale patterns in the abundances of SAR11 subclades, marine actinobacteria (OM1), members of the roseobacter clade and OCS116 in the South Atlantic. Environ Microbiol 14: 1133-1144
    • (2012) Environ Microbiol , vol.14 , pp. 1133-1144
    • Morris, R.M.1    Frazar, C.D.2    Carlson, C.A.3
  • 38
    • 77950645212 scopus 로고    scopus 로고
    • Artificial and natural duplicates in pyrosequencing reads of metagenomic data
    • Niu BF, Fu LM, Sun SL, Li WZ. (2010). Artificial and natural duplicates in pyrosequencing reads of metagenomic data. BMC Bioinformatics 11: 187
    • (2010) BMC Bioinformatics , vol.11 , pp. 187
    • Niu, B.F.1    Fu, L.M.2    Sun, S.L.3    Li, W.Z.4
  • 40
    • 84901020392 scopus 로고    scopus 로고
    • Single bacterial strain capable of significant contribution to carbon cycling in the surface ocean
    • Pedler BE, Aluwihare LI, Azam F. (2014). Single bacterial strain capable of significant contribution to carbon cycling in the surface ocean. Proc Natl Acad Sci 111: 7202-7207
    • (2014) Proc Natl Acad Sci , vol.111 , pp. 7202-7207
    • Pedler, B.E.1    Aluwihare, L.I.2    Azam, F.3
  • 41
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J et al. (2007). SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6
  • 42
    • 33846057724 scopus 로고    scopus 로고
    • NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt KD, Tatusova T, Maglott DR. (2007). NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res 35: D61-D65
    • (2007) Nucleic Acids Res , vol.35 , pp. D61-D65
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 44
    • 78651326786 scopus 로고    scopus 로고
    • FragGeneScan: Predicting genes in short and error-prone reads
    • Rho M, Tang H, Ye Y. (2010). FragGeneScan: predicting genes in short and error-prone reads. Nucleic Acids Res 38: e191
    • (2010) Nucleic Acids Res , vol.38 , pp. e191
    • Rho, M.1    Tang, H.2    Ye, Y.3
  • 46
    • 33947238287 scopus 로고    scopus 로고
    • The Sorcerer II global ocean sampling expedition: Northwest Atlantic through Eastern Tropical Pacific
    • Rusch DB, Halpern AL, Sutton G, Heidelberg KB, Williamson S , Yooseph S et al. (2007). The Sorcerer II global ocean sampling expedition: Northwest Atlantic through Eastern Tropical Pacific. PLoS Biol 5: 398-431
    • (2007) PLoS Biol , vol.5 , pp. 398-431
    • Rusch, D.B.1    Halpern, A.L.2    Sutton, G.3    Heidelberg, K.B.4    Williamson, S.5    Yooseph, S.6
  • 47
  • 49
    • 0033180187 scopus 로고    scopus 로고
    • Polyadenylation and degradation of mRNA in the chloroplast
    • Schuster G, Lisitsky I, Klaff P. (1999). Polyadenylation and degradation of mRNA in the chloroplast. Plant Physiol 120: 937-944
    • (1999) Plant Physiol , vol.120 , pp. 937-944
    • Schuster, G.1    Lisitsky, I.2    Klaff, P.3
  • 50
    • 79956287318 scopus 로고    scopus 로고
    • Integrated metatranscriptomic and metagenomic analysis of stratified microbial assemblages in the open ocean
    • Shi YM, Tyson GW, Eppley JM, DeLong EF. (2011). Integrated metatranscriptomic and metagenomic analysis of stratified microbial assemblages in the open ocean. ISME J 5: 999-1013
    • (2011) ISME J , vol.5 , pp. 999-1013
    • Shi, Y.M.1    Tyson, G.W.2    Eppley, J.M.3    Delong, E.F.4
  • 51
    • 0021066804 scopus 로고
    • Phenotypic correlates of genomic DNA content in unicellular eukaryotes and other cells
    • Shuter BJ, Thomas JE, Taylor WD, Zimmerman AM. (1983). Phenotypic correlates of genomic DNA content in unicellular eukaryotes and other cells. Am Nat 122: 26-44
    • (1983) Am Nat , vol.122 , pp. 26-44
    • Shuter, B.J.1    Thomas, J.E.2    Taylor, W.D.3    Zimmerman, A.M.4
  • 52
    • 34548160849 scopus 로고    scopus 로고
    • Correlation of oxygen consumption, cytochrome c oxidase, and cytochrome c oxidase subunit i gene expression in the termination of larval diapause in the bamboo borer, Omphisa fuscidentalis
    • Singtripop T, Saeangsakda M, Tatun N, Kaneko Y, Sakurai S. (2007). Correlation of oxygen consumption, cytochrome c oxidase, and cytochrome c oxidase subunit I gene expression in the termination of larval diapause in the bamboo borer, Omphisa fuscidentalis. J Insect Physiol 53: 933-939
    • (2007) J Insect Physiol , vol.53 , pp. 933-939
    • Singtripop, T.1    Saeangsakda, M.2    Tatun, N.3    Kaneko, Y.4    Sakurai, S.5
  • 53
    • 22544448652 scopus 로고    scopus 로고
    • Polyadenylation and degradation of human mitochondrial RNA: The prokaryotic past leaves its mark
    • Slomovic S, Laufer D, Geiger D, Schuster G. (2005). Polyadenylation and degradation of human mitochondrial RNA: the prokaryotic past leaves its mark. Mol Cell Biol 25: 6427-6435
    • (2005) Mol Cell Biol , vol.25 , pp. 6427-6435
    • Slomovic, S.1    Laufer, D.2    Geiger, D.3    Schuster, G.4
  • 54
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML Web servers
    • Stamatakis A, Hoover P, Rougemont J. (2008). A rapid bootstrap algorithm for the RAxML Web servers. Syst Biol 57: 758-771
    • (2008) Syst Biol , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 55
    • 79955856835 scopus 로고    scopus 로고
    • Energy starved Candidatus pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration
    • Steindler L, Schwalbach MS, Smith DP, Chan F, Giovannoni SJ. (2011). Energy starved Candidatus pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration. PLoS One 6: e19725
    • (2011) PLoS One , vol.6 , pp. e19725
    • Steindler, L.1    Schwalbach, M.S.2    Smith, D.P.3    Chan, F.4    Giovannoni, S.J.5
  • 56
    • 77954086440 scopus 로고    scopus 로고
    • Development and quantitative analyses of a universal rRNAsubtraction protocol for microbial metatranscriptomics
    • Stewart FJ, Ottesen EA, DeLong EF. (2010). Development and quantitative analyses of a universal rRNAsubtraction protocol for microbial metatranscriptomics. ISME J 4: 896-907
    • (2010) ISME J , vol.4 , pp. 896-907
    • Stewart, F.J.1    Ottesen, E.A.2    Delong, E.F.3
  • 57
    • 84855287323 scopus 로고    scopus 로고
    • Microbial metatranscriptomics in a permanent marine oxygen minimum zone
    • Stewart FJ, Ulloa O, DeLong EF. (2012). Microbial metatranscriptomics in a permanent marine oxygen minimum zone. Environ Microbiol 14: 23-40
    • (2012) Environ Microbiol , vol.14 , pp. 23-40
    • Stewart, F.J.1    Ulloa, O.2    Delong, E.F.3
  • 58
    • 33044504629 scopus 로고    scopus 로고
    • Trace metal ion buffers and their use in culture studies
    • In. Anderson RA (ed Elsevier: Oxford, UK
    • Sunda WG, Price NM, Morel FMM. (2005). Trace metal ion buffers and their use in culture studies. In. Anderson RA (ed). Algal Culturing Techniques. Elsevier: Oxford, UK, pp 35-64
    • (2005) Algal Culturing Techniques , pp. 35-64
    • Sunda, W.G.1    Price, N.M.2    Fmm, M.3
  • 59
    • 84860488672 scopus 로고    scopus 로고
    • Substratecontrolled succession of marine bacterioplankton populations induced by a phytoplankton bloom
    • Teeling H, Fuchs BM, Becher Dr, Klockow C, Gardebrecht A, Bennke CM et al. (2012). Substratecontrolled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science 336: 608-611
    • (2012) Science , vol.336 , pp. 608-611
    • Teeling, H.1    Fuchs, B.M.2    Becher, D.R.3    Klockow, C.4    Gardebrecht, A.5    Bennke, C.M.6
  • 60
    • 0141844668 scopus 로고    scopus 로고
    • A Synechococcus serotype is found preferentially in surface marine waters
    • Toledo G, Palenik B. (2003). A Synechococcus serotype is found preferentially in surface marine waters. Limnol Oceanogr 48: 1744-1755
    • (2003) Limnol Oceanogr , vol.48 , pp. 1744-1755
    • Toledo, G.1    Palenik, B.2
  • 61
    • 84891163637 scopus 로고    scopus 로고
    • Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters
    • Unrein F, Gasol JM, Not F, Forn I, Massana R. (2014). Mixotrophic haptophytes are key bacterial grazers in oligotrophic coastal waters. ISME J 8: 164-176
    • (2014) ISME J , vol.8 , pp. 164-176
    • Unrein, F.1    Gasol, J.M.2    Not, F.3    Forn, I.4    Massana, R.5
  • 62
    • 84880919986 scopus 로고    scopus 로고
    • High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences
    • Vergin KL, Bank B, Monier A, Thrash JC, Temperton B, Treusch AH et al. (2013). High-resolution SAR11. ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences. ISME J 7: 1322-1332
    • (2013) ISME J , vol.7 , pp. 1322-1332
    • Vergin, K.L.1    Bank, B.2    Monier, A.3    Thrash, J.C.4    Temperton, B.5    Treusch, A.H.6
  • 63
    • 70350502063 scopus 로고    scopus 로고
    • Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones
    • Walsh DA, Zaikova E, Howes CG, Song YC, Wright JJ, Tringe SG et al. (2009). Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones. Science 326: 578-582
    • (2009) Science , vol.326 , pp. 578-582
    • Walsh, D.A.1    Zaikova, E.2    Howes, C.G.3    Song, Y.C.4    Wright, J.J.5    Tringe, S.G.6
  • 64
    • 0035031966 scopus 로고    scopus 로고
    • A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
    • Whelan S, Goldman N. (2001). A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol 18: 691-699
    • (2001) Mol Biol Evol , vol.18 , pp. 691-699
    • Whelan, S.1    Goldman, N.2
  • 66
    • 55649110049 scopus 로고    scopus 로고
    • A simple, fast, and accurate method of phylogenomic inference
    • Wu M, Eisen JA. (2008). A simple, fast, and accurate method of phylogenomic inference. Genome Biol 9: R151
    • (2008) Genome Biol , vol.9 , pp. R151
    • Wu, M.1    Eisen, J.A.2
  • 67
    • 34250896177 scopus 로고    scopus 로고
    • The significance of nitrification for oceanic new production
    • Yool A, Martin AP, Fernandez C, Clark DR. (2007). The significance of nitrification for oceanic new production. Nature 447: 999-1002
    • (2007) Nature , vol.447 , pp. 999-1002
    • Yool, A.1    Martin, A.P.2    Fernandez, C.3    Clark, D.R.4
  • 68
    • 38149140067 scopus 로고    scopus 로고
    • Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes
    • Zwirglmaier K, Jardiller L, Ostrowski M, Mazard S, Garczarek L, Vaulot D et al. (2008). Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes. Environ Microbiol 10: 147-161
    • (2008) Environ Microbiol , vol.10 , pp. 147-161
    • Zwirglmaier, K.1    Jardiller, L.2    Ostrowski, M.3    Mazard, S.4    Garczarek, L.5    Vaulot, D.6


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