-
1
-
-
0015245041
-
Inside-Outside Transitions of Phospholipids in Vesicle Membranes
-
Kornberg, R. D.; McConnell, H. M. Inside-Outside Transitions of Phospholipids in Vesicle Membranes Biochemistry 1971, 10, 1111 - 1120
-
(1971)
Biochemistry
, vol.10
, pp. 1111-1120
-
-
Kornberg, R.D.1
McConnell, H.M.2
-
3
-
-
36649006484
-
New Insights into the Roles of Proteins and Lipids in Membrane Transport of Fatty Acids
-
Hamilton, J. A. New Insights into the Roles of Proteins and Lipids in Membrane Transport of Fatty Acids Prostaglandins, Leukotrienes Essent. Fatty Acids 2007, 77, 355 - 361
-
(2007)
Prostaglandins, Leukotrienes Essent. Fatty Acids
, vol.77
, pp. 355-361
-
-
Hamilton, J.A.1
-
4
-
-
43049136163
-
Flip-Flop of Hydroxy Fatty Acids Across the Membrane as Monitored by Proton-Sensitive Microelectrodes
-
Pohl, E. E.; Voltchenko, A. M.; Rupprecht, A. Flip-Flop of Hydroxy Fatty Acids Across the Membrane as Monitored by Proton-Sensitive Microelectrodes Biochim. Biophys. Acta 2008, 1778, 1292 - 1297
-
(2008)
Biochim. Biophys. Acta
, vol.1778
, pp. 1292-1297
-
-
Pohl, E.E.1
Voltchenko, A.M.2
Rupprecht, A.3
-
5
-
-
0023790651
-
Proton Conductance Caused by Long-Chain Fatty Acids in Phospholipid Bilayer Membranes
-
Gutknecht, J. Proton Conductance Caused by Long-Chain Fatty Acids in Phospholipid Bilayer Membranes J. Membr. Biol. 1988, 106, 83 - 93
-
(1988)
J. Membr. Biol.
, vol.106
, pp. 83-93
-
-
Gutknecht, J.1
-
6
-
-
0034700981
-
Changes of Intrinsic Membrane Potentials Induced by Flip-Flop of Long-Chain Fatty Acids
-
Pohl, E. E.; Peterson, U.; Sun, J.; Pohl, P. Changes of Intrinsic Membrane Potentials Induced by Flip-Flop of Long-Chain Fatty Acids Biochemistry 2000, 39, 1834 - 1839
-
(2000)
Biochemistry
, vol.39
, pp. 1834-1839
-
-
Pohl, E.E.1
Peterson, U.2
Sun, J.3
Pohl, P.4
-
7
-
-
1642422291
-
Docosahexaenoic Acid and Other Fatty Acids Induce a Decrease in pHi in Jurkat T-cells
-
Aires, V.; Hichami, A.; Moutairou, K.; Khan, N. A. Docosahexaenoic Acid and Other Fatty Acids Induce a Decrease in pHi in Jurkat T-cells Br. J. Pharmacol. 2003, 140, 1217 - 1226
-
(2003)
Br. J. Pharmacol.
, vol.140
, pp. 1217-1226
-
-
Aires, V.1
Hichami, A.2
Moutairou, K.3
Khan, N.A.4
-
8
-
-
13944284082
-
Fatty Acid Flip-Flop and Proton Transport Determined by Short-Circuit Current in Planar Bilayers
-
Brunaldi, K.; Miranda, M. A.; Abdulkader, F.; Curi, R.; Procopio, J. Fatty Acid Flip-Flop and Proton Transport Determined by Short-Circuit Current in Planar Bilayers J. Lipid Res. 2005, 46, 245 - 251
-
(2005)
J. Lipid Res.
, vol.46
, pp. 245-251
-
-
Brunaldi, K.1
Miranda, M.A.2
Abdulkader, F.3
Curi, R.4
Procopio, J.5
-
9
-
-
62349113335
-
Proton Flux Induced by Free Fatty Acids across Phospholipid Bilayers: New Evidences Based on Short-Circuit Measurements in Planar Lipid Membranes
-
Arcisio-Miranda, M.; Abdulkader, F.; Brunaldi, K.; Curi, R.; Procopio, J. Proton Flux Induced by Free Fatty Acids across Phospholipid Bilayers: New Evidences Based on Short-Circuit Measurements in Planar Lipid Membranes Arch. Biochem. Biophys. 2009, 484, 63 - 69
-
(2009)
Arch. Biochem. Biophys.
, vol.484
, pp. 63-69
-
-
Arcisio-Miranda, M.1
Abdulkader, F.2
Brunaldi, K.3
Curi, R.4
Procopio, J.5
-
10
-
-
2542533863
-
Membrane Growth Can Generate a Transmembrane pH Gradient in Fatty Acid Vesicles
-
Chen, I. A.; Szostak, J. W. Membrane Growth Can Generate a Transmembrane pH Gradient in Fatty Acid Vesicles Proc. Natl. Acad. Sci. U. S. A. 2004, 101, 7965 - 7970
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 7965-7970
-
-
Chen, I.A.1
Szostak, J.W.2
-
11
-
-
67349167656
-
Growth and Shape Transformations of Giant Phospholipid Vesicles upon Interaction with an Aqueous Oleic Acid Suspension
-
Peterlin, P. Z.; Arrigler, V.; Kogej, K.; Svetinaa, S.; Walde, P. Growth and Shape Transformations of Giant Phospholipid Vesicles upon Interaction with an Aqueous Oleic Acid Suspension Chem. Phys. Lipids 2009, 159, 67 - 76
-
(2009)
Chem. Phys. Lipids
, vol.159
, pp. 67-76
-
-
Peterlin, P.Z.1
Arrigler, V.2
Kogej, K.3
Svetinaa, S.4
Walde, P.5
-
12
-
-
0026437584
-
PH Gradients across Phospholipid Membranes Caused by Fast Flip-Flop of Un-ionized Fatty Acids
-
Kamp, F.; Hamilton, J. A. pH Gradients across Phospholipid Membranes Caused by Fast Flip-Flop of Un-ionized Fatty Acids Proc. Natl. Acad. Sci. U. S. A. 1992, 89, 11367 - 11370
-
(1992)
Proc. Natl. Acad. Sci. U. S. A.
, vol.89
, pp. 11367-11370
-
-
Kamp, F.1
Hamilton, J.A.2
-
13
-
-
0029090984
-
Fatty Acid Flip-Flop in Phospholipid Bilayers Is Extremely Fast
-
Kamp, F.; Zakim, D.; Zhang, F.; Noy, N.; Hamilton, J. A. Fatty Acid Flip-Flop in Phospholipid Bilayers Is Extremely Fast Biochemistry 1995, 34, 11928 - 11937
-
(1995)
Biochemistry
, vol.34
, pp. 11928-11937
-
-
Kamp, F.1
Zakim, D.2
Zhang, F.3
Noy, N.4
Hamilton, J.A.5
-
14
-
-
0037022203
-
Kinetics and Mechanism of Long-Chain Fatty Acid Transport into Phosphatidylcholine Vesicles from Various Donor Systems
-
Thomas, R. M.; Baici, A.; Werder, M.; Schulthess, G.; Hauser, H. Kinetics and Mechanism of Long-Chain Fatty Acid Transport into Phosphatidylcholine Vesicles from Various Donor Systems Biochemistry 2002, 41, 1591 - 1601
-
(2002)
Biochemistry
, vol.41
, pp. 1591-1601
-
-
Thomas, R.M.1
Baici, A.2
Werder, M.3
Schulthess, G.4
Hauser, H.5
-
15
-
-
50849085763
-
Fatty Acid Flip-Flop in a Model Membrane is Faster than Desorption into the Aqueous Phase
-
Simard, J. R.; Pillai, B. K.; Hamilton, J. A. Fatty Acid Flip-Flop in a Model Membrane is Faster than Desorption into the Aqueous Phase Biochemistry 2008, 47, 9081 - 9089
-
(2008)
Biochemistry
, vol.47
, pp. 9081-9089
-
-
Simard, J.R.1
Pillai, B.K.2
Hamilton, J.A.3
-
16
-
-
70450246964
-
Fast Diffusion of Very Long Chain Saturated Fatty Acids across a Bilayer Membrane and Their Rapid Extraction by Cyclodextrins: Implications for Adrenoleukodystrophy
-
Pillai, B. K.; Jasuja, R.; Simard, J. R.; Hamilton, J. A. Fast Diffusion of Very Long Chain Saturated Fatty Acids across a Bilayer Membrane and Their Rapid Extraction by Cyclodextrins: Implications for Adrenoleukodystrophy J. Biol. Chem. 2009, 284, 33296 - 33304
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 33296-33304
-
-
Pillai, B.K.1
Jasuja, R.2
Simard, J.R.3
Hamilton, J.A.4
-
17
-
-
70350507265
-
Flip-Flop Is the Rate-Limiting Step for Transport of Free Fatty Acids across Lipid Vesicle Membranes
-
Carley, A. N.; Kleinfeld, A. M. Flip-Flop Is the Rate-Limiting Step for Transport of Free Fatty Acids across Lipid Vesicle Membranes Biochemistry 2009, 48, 10437 - 10445
-
(2009)
Biochemistry
, vol.48
, pp. 10437-10445
-
-
Carley, A.N.1
Kleinfeld, A.M.2
-
18
-
-
0142147270
-
Experimental Models of Primitative Cellular Compartments: Encapsulation, Growth, and Division
-
Hanczyc, M. M.; Fujikawa, S. M.; Szostak, J. W. Experimental Models of Primitative Cellular Compartments: Encapsulation, Growth, and Division Science 2003, 302, 618 - 622
-
(2003)
Science
, vol.302
, pp. 618-622
-
-
Hanczyc, M.M.1
Fujikawa, S.M.2
Szostak, J.W.3
-
19
-
-
4444281964
-
The Emergence of Competition between Model Protocells
-
Chen, I. A.; Roberts, R. W.; Szostak, J. W. The Emergence of Competition Between Model Protocells Science 2004, 305, 1474 - 1476
-
(2004)
Science
, vol.305
, pp. 1474-1476
-
-
Chen, I.A.1
Roberts, R.W.2
Szostak, J.W.3
-
20
-
-
79955109405
-
Physical Effects Underlying the Transition from Primitive to Modern Cell Membranes
-
Budin, I.; Szostak, J. W. Physical Effects Underlying the Transition from Primitive to Modern Cell Membranes Proc. Natl. Acad. Sci. U. S. A. 2011, 108, 5249 - 5254
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 5249-5254
-
-
Budin, I.1
Szostak, J.W.2
-
21
-
-
84862550846
-
Photochemically Driven Redox Chemistry Induces Protocell Membrane Pearling and Division
-
Zhu, T. F.; Adamala, K.; Zhang, N.; Szostak, J. W. Photochemically Driven Redox Chemistry Induces Protocell Membrane Pearling and Division Proc. Natl. Acad. Sci. U. S. A. 2012, 109, 9828 - 9832
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 9828-9832
-
-
Zhu, T.F.1
Adamala, K.2
Zhang, N.3
Szostak, J.W.4
-
22
-
-
84879086656
-
Competition between Model Protocells Driven by an Encapsulated Catalyst
-
Adamala, K.; Szostak, J. W. Competition between Model Protocells Driven by an Encapsulated Catalyst Nat. Chem. 2013, 5, 495 - 501
-
(2013)
Nat. Chem.
, vol.5
, pp. 495-501
-
-
Adamala, K.1
Szostak, J.W.2
-
23
-
-
0018119270
-
Liposomes from Ionic, Singlechain Amphiphiles
-
Hargreaves, W. R.; Deamer, D. W. Liposomes from Ionic, Singlechain Amphiphiles Biochemistry 1978, 17, 3759 - 3768
-
(1978)
Biochemistry
, vol.17
, pp. 3759-3768
-
-
Hargreaves, W.R.1
Deamer, D.W.2
-
24
-
-
0000606391
-
Autopoietic Self-Reproduction of Fatty Acid Vesicles
-
Walde, P.; Wick, R.; Fresta, M.; Mangone, A.; Luisi, P. L. Autopoietic Self-Reproduction of Fatty Acid Vesicles J. Am. Chem. Soc. 1994, 116, 11649 - 11654
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 11649-11654
-
-
Walde, P.1
Wick, R.2
Fresta, M.3
Mangone, A.4
Luisi, P.L.5
-
25
-
-
70349999961
-
Self-Assembly and Function of Primitive Cell Membranes
-
Pohorille, A.; Deamer, D. Self-Assembly and Function of Primitive Cell Membranes Res. Microbiol. 2009, 160, 449 - 456
-
(2009)
Res. Microbiol.
, vol.160
, pp. 449-456
-
-
Pohorille, A.1
Deamer, D.2
-
26
-
-
39849097393
-
Replacing the Cholesterol Hydroxyl Group with the Ketone Group Facilitates Sterol Flip-Flop and Promotes Membrane Fluidity
-
Rog, T.; Stimson, L. M.; Pasenkiewicz-Gierula, M.; Vattulainen, I.; Karttunen, M. Replacing the Cholesterol Hydroxyl Group with the Ketone Group Facilitates Sterol Flip-Flop and Promotes Membrane Fluidity J. Phys. Chem. B 2008, 112, 1946 - 1952
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 1946-1952
-
-
Rog, T.1
Stimson, L.M.2
Pasenkiewicz-Gierula, M.3
Vattulainen, I.4
Karttunen, M.5
-
27
-
-
43049156443
-
Energetics of Cholesterol Transfer between Lipid Bilayers
-
Zhang, Z.; Lu, L.; Berkowitz, M. L. Energetics of Cholesterol Transfer between Lipid Bilayers J. Phys. Chem. B 2008, 112, 3807 - 3811
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 3807-3811
-
-
Zhang, Z.1
Lu, L.2
Berkowitz, M.L.3
-
28
-
-
69349085157
-
Molecular View of Cholesterol Flip-Flop and Chemical Potential in Different Membrane Environments
-
Bennett, W. F.; MacCallum, J. L.; Hinner, M. J.; Marrink, S. J.; Tieleman, D. P. Molecular View of Cholesterol Flip-Flop and Chemical Potential in Different Membrane Environments J. Am. Chem. Soc. 2009, 131, 12714 - 12720
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 12714-12720
-
-
Bennett, W.F.1
MacCallum, J.L.2
Hinner, M.J.3
Marrink, S.J.4
Tieleman, D.P.5
-
29
-
-
77958498212
-
Cholesterol flip-flop: Insights from Free Energy Simulation Studies
-
Jo, S.; Rui, H.; Lim, J. B.; Klauda, J. B.; Im, W. Cholesterol flip-flop: Insights from Free Energy Simulation Studies J. Phys. Chem. B 2010, 114, 13342 - 13348
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 13342-13348
-
-
Jo, S.1
Rui, H.2
Lim, J.B.3
Klauda, J.B.4
Im, W.5
-
30
-
-
84864220156
-
Flip-Flop of Steroids in Phospholipid Bilayers: Effects of the Chemical Structure on Transbilayer Diffusion
-
Parisio, G.; Sperotto, M. M.; Ferrarini, A. Flip-Flop of Steroids in Phospholipid Bilayers: Effects of the Chemical Structure on Transbilayer Diffusion J. Am. Chem. Soc. 2012, 134, 12198 - 12208
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 12198-12208
-
-
Parisio, G.1
Sperotto, M.M.2
Ferrarini, A.3
-
31
-
-
84857748574
-
Molecular Simulation of Rapid Translocation of Cholesterol, Diacylglycerol, and Ceramide in Model Raft and Nonraft Membranes
-
Bennett, W. F.; Tieleman, D. P. Molecular Simulation of Rapid Translocation of Cholesterol, Diacylglycerol, and Ceramide in Model Raft and Nonraft Membranes J. Lipid Res. 2012, 53, 421 - 429
-
(2012)
J. Lipid Res.
, vol.53
, pp. 421-429
-
-
Bennett, W.F.1
Tieleman, D.P.2
-
33
-
-
0347193736
-
Reaction-Rate Theory: Fifty Years after Kramers
-
Hänggi, P.; Talkner, P.; Borkovec, M. Reaction-Rate Theory: Fifty Years after Kramers Rev. Mod. Phys. 1990, 62, 251 - 341
-
(1990)
Rev. Mod. Phys.
, vol.62
, pp. 251-341
-
-
Hänggi, P.1
Talkner, P.2
Borkovec, M.3
-
34
-
-
0036696910
-
String Method for the Study of Rare Events
-
No. 052301
-
E, W.; Ren, W.; Vanden-Eijnden, E. String Method for the Study of Rare Events Phys. Rev. B 2002, 66 052301
-
(2002)
Phys. Rev. B
, vol.66
-
-
W, E.1
Ren, W.2
Vanden-Eijnden, E.3
-
35
-
-
34247881948
-
Simplified and Improved String Method for Computing the Minimum Energy Paths in Barrier-Crossing Events
-
E, W.; Ren, W.; Vanden-Eijnden, E. Simplified and Improved String Method for Computing the Minimum Energy Paths in Barrier-Crossing Events J. Chem. Phys. 2007, 126 164103
-
(2007)
J. Chem. Phys.
, vol.126
, pp. 164103
-
-
W, E.1
Ren, W.2
Vanden-Eijnden, E.3
-
36
-
-
45949108535
-
Finding Transition Pathways Using the String Method with Swarms of Trajectories
-
Pan, A. C.; Sezer, D.; Roux, B. Finding Transition Pathways Using the String Method with Swarms of Trajectories J. Phys. Chem. B 2008, 112, 3432 - 3440
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 3432-3440
-
-
Pan, A.C.1
Sezer, D.2
Roux, B.3
-
37
-
-
33751158845
-
Simulation of Water Transport through a Lipid Membrane
-
Marrink, S.-J.; Berendsen, H. J. C. Simulation of Water Transport through a Lipid Membrane J. Phys. Chem. 1994, 98, 4155 - 4168
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 4155-4168
-
-
Marrink, S.-J.1
Berendsen, H.J.C.2
-
38
-
-
0029972071
-
Mechanism of Unassisted Ion Transport across Membrane Bilayers
-
Wilson, M. W.; Pohorille, A. Mechanism of Unassisted Ion Transport across Membrane Bilayers J. Am. Chem. Soc. 1996, 118, 6580 - 6587
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 6580-6587
-
-
Wilson, M.W.1
Pohorille, A.2
-
39
-
-
33751237947
-
Liposomal Drug Transport: A Molecular Perspective from Molecular Dynamics Simulations in Lipid Bilayers
-
Xiang, T.-X.; Anderson, B. D. Liposomal Drug Transport: A Molecular Perspective from Molecular Dynamics Simulations in Lipid Bilayers Adv. Drug Delivery Rev. 2006, 58, 1357 - 1378
-
(2006)
Adv. Drug Delivery Rev.
, vol.58
, pp. 1357-1378
-
-
Xiang, T.-X.1
Anderson, B.D.2
-
40
-
-
67651230078
-
Permeation of Membranes by Ribose and Its Diastereomers
-
Wei, C.; Pohorille, A. Permeation of Membranes by Ribose and Its Diastereomers J. Am. Chem. Soc. 2009, 131, 10237 - 10245
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 10237-10245
-
-
Wei, C.1
Pohorille, A.2
-
41
-
-
79955746773
-
Passive Permeation Across Lipid Bilayers: A Literature Review
-
Royal Society of Chemistry: Cambridge, U.K.
-
Orsi, M.; Essex, J. W. Passive Permeation Across Lipid Bilayers: A Literature Review. In Molecular Simulations and Biomembranes: From Biophysics to Function; Sansom, M. S. P.; Biggin, P. C., Eds.; Royal Society of Chemistry: Cambridge, U.K., 2010.
-
(2010)
Molecular Simulations and Biomembranes: From Biophysics to Function
-
-
Orsi, M.1
Essex, J.W.2
Sansom, M.S.P.3
Biggin, P.C.4
-
42
-
-
66449132894
-
-
Springer Science + Business Media: New York, NY, USA
-
Chung, S.-H.; Anderson, O. S.; Krishnamurthy, V. V., Eds. Biological Membrane Ion Channels: Dynamics, Structure, and Applications; Springer Science + Business Media: New York, NY, USA, 2007.
-
(2007)
Biological Membrane Ion Channels: Dynamics, Structure, and Applications
-
-
Chung, S.-H.1
Anderson, O.S.2
Krishnamurthy, V.V.3
-
43
-
-
79959643733
-
Molecular Dynamics Simulation of the Antiamoebin Ion Channel: Linking Structure and Conductance
-
Wilson, M. A.; Wei, C.; Bjelkmar, P.; Wallace, B. A.; Pohorille, A. Molecular Dynamics Simulation of the Antiamoebin Ion Channel: Linking Structure and Conductance Biophys. J. 2011, 100, 2394 - 2402
-
(2011)
Biophys. J.
, vol.100
, pp. 2394-2402
-
-
Wilson, M.A.1
Wei, C.2
Bjelkmar, P.3
Wallace, B.A.4
Pohorille, A.5
-
44
-
-
84870927064
-
Modeling and Simulation of Ion Channels
-
Maffeo, C.; Bhattacharya, S.; Yoo, J.; Wells, D.; Aksimentiev, A. Modeling and Simulation of Ion Channels Chem. Rev. 2012, 112, 6250 - 6284
-
(2012)
Chem. Rev.
, vol.112
, pp. 6250-6284
-
-
Maffeo, C.1
Bhattacharya, S.2
Yoo, J.3
Wells, D.4
Aksimentiev, A.5
-
45
-
-
0041784950
-
All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins
-
MacKerell, A. D., Jr.; Bashford, D.; Dunbrack, R. L.; Evanseck, J. D.; Field, M. J.; Fischer, S.; Gao, J.; Guo, H.; Ha, S.; Joseph-McCarthy,; et al. D. All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins J. Phys. Chem. B 1998, 102, 3586 - 3616
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586-3616
-
-
MacKerell, A.D.1
Bashford, D.2
Dunbrack, R.L.3
Evanseck, J.D.4
Field, M.J.5
Fischer, S.6
Gao, J.7
Guo, H.8
Ha, S.9
Joseph-Mccarthy, D.10
-
46
-
-
0034250744
-
An Improved Empirical Potential Energy Function for Molecular Simulations of Phospholipids
-
Feller, S.; MacKerell, A. D., Jr. An Improved Empirical Potential Energy Function for Molecular Simulations of Phospholipids J. Phys. Chem. B 2000, 104, 7510 - 7515
-
(2000)
J. Phys. Chem. B
, vol.104
, pp. 7510-7515
-
-
Feller, S.1
MacKerell, A.D.2
-
47
-
-
77953377650
-
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
-
Klauda, J. B.; Venable, R. M.; Freites, J. A.; O'Connor, J. W.; Tobias, D. J.; Mondragon-Ramirez, C.; Vorobyov, I.; MacKerell, A. D., Jr.; Pastor, R. W. Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types J. Phys. Chem. B 2010, 114, 7830 - 7843
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 7830-7843
-
-
Klauda, J.B.1
Venable, R.M.2
Freites, J.A.3
O'Connor, J.W.4
Tobias, D.J.5
Mondragon-Ramirez, C.6
Vorobyov, I.7
MacKerell, A.D.8
Pastor, R.W.9
-
48
-
-
0004016501
-
Comparison of Simple Potential Functions for Simulating Liquid Water
-
Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W.; Klein, M. L. Comparison of Simple Potential Functions for Simulating Liquid Water J. Chem. Phys. 1983, 79, 926 - 935
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
49
-
-
27344436659
-
Scalable Molecular Dynamics with NAMD
-
Phillips, J. C.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R. D.; Kalé, L.; Schulten, K. Scalable Molecular Dynamics with NAMD J. Comput. Chem. 2005, 26, 1781 - 1802
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kalé, L.9
Schulten, K.10
-
50
-
-
74049112717
-
Millisecond-Scale Molecular Dynamics Simulations on Anton
-
ACM Press: New York, NY, USA
-
Shaw, D. E.; Dror, R. O.; Salmon, J. K.; Grossman, J. P.; Mackenzie, K. M.; Bank, J. A.; Young, C.; Deneroff, M. M.; Batson, B.; Bowers, K. J.; et al. Millisecond-Scale Molecular Dynamics Simulations on Anton. SC '09 Proceedings of the Conference on High Performance Computing Networking, Storage and Analysis, Portland, OR, USA, Nov. 14-20, 2009; ACM Press: New York, NY, USA, 2009; pp 1 - 11.
-
(2009)
SC '09 Proceedings of the Conference on High Performance Computing Networking, Storage and Analysis, Portland, OR, USA, Nov. 14-20, 2009
, pp. 1-11
-
-
Shaw, D.E.1
Dror, R.O.2
Salmon, J.K.3
Grossman, J.P.4
MacKenzie, K.M.5
Bank, J.A.6
Young, C.7
Deneroff, M.M.8
Batson, B.9
Bowers, K.J.10
-
51
-
-
0001008704
-
Molecular Dynamics Simulation of a Bilayer of 200 Lipids in the Gel and in the Liquid-Crystal Phases
-
Heller, H.; Schaefer, M.; Schulten, K. Molecular Dynamics Simulation of a Bilayer of 200 Lipids in the Gel and in the Liquid-Crystal Phases J. Phys. Chem. 1993, 97, 8343 - 8360
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 8343-8360
-
-
Heller, H.1
Schaefer, M.2
Schulten, K.3
-
52
-
-
0033061633
-
Simulation Study of a Gramicidin/Lipid Bilayer System in Excess Water and Lipid. I. Structure of the Molecular Complex
-
Chiu, S. W.; Subramanian, S.; Jakobsson, E. Simulation Study of a Gramicidin/Lipid Bilayer System in Excess Water and Lipid. I. Structure of the Molecular Complex Biophys. J. 1999, 76, 1929 - 1938
-
(1999)
Biophys. J.
, vol.76
, pp. 1929-1938
-
-
Chiu, S.W.1
Subramanian, S.2
Jakobsson, E.3
-
53
-
-
36248954981
-
Interaction of Oleic Acid with Dipalmitoylphosphatidylcholine (DPPC) Bilayers Simulated by Molecular Dynamics
-
Notman, R.; Noro, M. G.; Jamshed, A. Interaction of Oleic Acid with Dipalmitoylphosphatidylcholine (DPPC) Bilayers Simulated by Molecular Dynamics J. Phys. Chem. B 2007, 111, 12748 - 12755
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 12748-12755
-
-
Notman, R.1
Noro, M.G.2
Jamshed, A.3
-
56
-
-
79953290487
-
Permeation of Nucleosides through Lipid Bilayers
-
Wei, C.; Pohorille, A. Permeation of Nucleosides through Lipid Bilayers J. Phys. Chem. B 2011, 115, 3681 - 3688
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 3681-3688
-
-
Wei, C.1
Pohorille, A.2
-
57
-
-
84858009825
-
Unassisted Transport of N -Acetyl- l -tryptophanamide through Membrane: Experiment and Simulation of Kinetics
-
Cardenas, A. E.; Jas, G. S.; DeLeon, K. Y.; Hegefeld, W. A.; Kuczera, K.; Elber, R. Unassisted Transport of N -Acetyl- l -tryptophanamide through Membrane: Experiment and Simulation of Kinetics J. Phys. Chem. B 2012, 116, 2739 - 2750
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 2739-2750
-
-
Cardenas, A.E.1
Jas, G.S.2
Deleon, K.Y.3
Hegefeld, W.A.4
Kuczera, K.5
Elber, R.6
-
58
-
-
84879204248
-
Exploring the Free Energy Landscape of Solutes Embedded in Lipid Bilayers
-
Jambeck, J. P. M.; Lyubartsev, A. P. Exploring the Free Energy Landscape of Solutes Embedded in Lipid Bilayers J. Phys. Chem. Lett. 2013, 4, 1781 - 1787
-
(2013)
J. Phys. Chem. Lett.
, vol.4
, pp. 1781-1787
-
-
Jambeck, J.P.M.1
Lyubartsev, A.P.2
-
59
-
-
83455177932
-
Statistical Convergence of Equilibrium Properties in Simulations of Molecular Solutes Embedded in Lipid Bilayers
-
Neale, C.; Bennett, W. F.; Tieleman, D. P.; Pomes, R. Statistical Convergence of Equilibrium Properties in Simulations of Molecular Solutes Embedded in Lipid Bilayers J. Chem. Theory Comput. 2011, 7, 4175 - 4188
-
(2011)
J. Chem. Theory Comput.
, vol.7
, pp. 4175-4188
-
-
Neale, C.1
Bennett, W.F.2
Tieleman, D.P.3
Pomes, R.4
-
60
-
-
0003957604
-
-
Springer: New York, NY, USA
-
Freidlin, M. I.; Wentzell, A. D. Random Perturbations of Dynamical Systems, 2 nd ed.; Springer: New York, NY, USA, 1998.
-
(1998)
Random Perturbations of Dynamical Systems, 2nd Ed.
-
-
Freidlin, M.I.1
Wentzell, A.D.2
-
62
-
-
0000791588
-
Conformational Kinetics of Aliphatic Tails
-
Ferrarini, A.; Moro, G.; Nordio, P. L. Conformational Kinetics of Aliphatic Tails Mol. Phys. 1988, 63, 225 - 247
-
(1988)
Mol. Phys.
, vol.63
, pp. 225-247
-
-
Ferrarini, A.1
Moro, G.2
Nordio, P.L.3
-
63
-
-
0011719423
-
Models of Conformation Dynamics
-
Kluwer Academic: Dordrecht, The Netherlands
-
Moro, G. Models of Conformation Dynamics. In Reactive and Flexible Molecules in Liquids; Dorfmuller, Th., Ed.; Kluwer Academic: Dordrecht, The Netherlands, 1989; pp 107 - 139.
-
(1989)
Reactive and Flexible Molecules in Liquids
, pp. 107-139
-
-
Moro, G.1
Dorfmuller, Th.2
-
64
-
-
0000782086
-
Statistical Theory of the Decay of Metastable States
-
Langer, J. S. Statistical Theory of the Decay of Metastable States Ann. Phys. 1969, 54, 258 - 275
-
(1969)
Ann. Phys.
, vol.54
, pp. 258-275
-
-
Langer, J.S.1
-
65
-
-
33847327575
-
The fluctuation-dissipation theorem
-
Kubo, R. The fluctuation-dissipation theorem Rep. Prog. Phys. 1966, 29, 255 - 284
-
(1966)
Rep. Prog. Phys.
, vol.29
, pp. 255-284
-
-
Kubo, R.1
-
66
-
-
0016974034
-
Liquid Diffusivities in Normal Paraffin Solutions
-
Hayduk, W.; Loakimidis, S. Liquid Diffusivities in Normal Paraffin Solutions J. Chem. Eng. Data 1976, 21, 255 - 260
-
(1976)
J. Chem. Eng. Data
, vol.21
, pp. 255-260
-
-
Hayduk, W.1
Loakimidis, S.2
-
67
-
-
0022476714
-
Permeability of Small Nonelectrolytes through Lipid Bilayer Membranes
-
Walter, A.; Gutknecht, J. Permeability of Small Nonelectrolytes through Lipid Bilayer Membranes J. Membr. Biol. 1986, 90, 207 - 217
-
(1986)
J. Membr. Biol.
, vol.90
, pp. 207-217
-
-
Walter, A.1
Gutknecht, J.2
-
68
-
-
73449102868
-
Flip-Flop-Induced Relaxation of Bending Energy: Implications for Membrane Remodeling
-
Bruckner, R. J.; Mansy, S. S.; Ricardo, A.; Mahadevan, L.; Szostak, J. W. Flip-Flop-Induced Relaxation of Bending Energy: Implications for Membrane Remodeling Biophys. J. 2009, 97, 3113 - 3122
-
(2009)
Biophys. J.
, vol.97
, pp. 3113-3122
-
-
Bruckner, R.J.1
Mansy, S.S.2
Ricardo, A.3
Mahadevan, L.4
Szostak, J.W.5
-
69
-
-
0021196072
-
Permeation of Long Chain Fatty Acid into Adipocytes. Kinetics, Specificity, and Evidence for Involvement of a Membrane Protein
-
Abumrad, N. A.; Park, J. H.; Park, C. R. Permeation of Long Chain Fatty Acid into Adipocytes. Kinetics, Specificity, and Evidence for Involvement of a Membrane Protein J. Biol. Chem. 1984, 259, 8945 - 8953
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 8945-8953
-
-
Abumrad, N.A.1
Park, J.H.2
Park, C.R.3
-
70
-
-
0028152492
-
Expression Cloning and Characterization of a Novel Adipocyte Long Chain Fatty Acid Transport Protein
-
Schaffer, J. E.; Lodish, H. F. Expression Cloning and Characterization of a Novel Adipocyte Long Chain Fatty Acid Transport Protein Cell 1994, 79, 427 - 436
-
(1994)
Cell
, vol.79
, pp. 427-436
-
-
Schaffer, J.E.1
Lodish, H.F.2
-
71
-
-
0033525003
-
Identification of Caveolin-1 as a Fatty Acid Binding Protein
-
Trigatti, B. L.; Anderson, R. G.; Gerber, G. E. Identification of Caveolin-1 as a Fatty Acid Binding Protein Biochem. Biophys. Res. Commun. 1999, 255, 34 - 39
-
(1999)
Biochem. Biophys. Res. Commun.
, vol.255
, pp. 34-39
-
-
Trigatti, B.L.1
Anderson, R.G.2
Gerber, G.E.3
-
72
-
-
33747881291
-
How Fatty Acids of Different Chain Length Enter and Leave Cells by Free Diffusion
-
Kamp, F.; Hamilton, J. A. How Fatty Acids of Different Chain Length Enter and Leave Cells by Free Diffusion Prostaglandins, Leukotrienes Essent. Fatty Acids 2006, 75, 149 - 159
-
(2006)
Prostaglandins, Leukotrienes Essent. Fatty Acids
, vol.75
, pp. 149-159
-
-
Kamp, F.1
Hamilton, J.A.2
-
73
-
-
0019323432
-
Measurement of Net Proton-Hydroxyl Permeation of Large Unilamellar Liposomes with the Fluorescent pH Probe 9-Aminoacridine
-
Nichols, J. W.; Hill, M. W.; Bangham, A. D.; Deamer, D. W. Measurement of Net Proton-Hydroxyl Permeation of Large Unilamellar Liposomes with the Fluorescent pH Probe 9-Aminoacridine Biochim. Biophys. Acta 1980, 596, 393 - 403
-
(1980)
Biochim. Biophys. Acta
, vol.596
, pp. 393-403
-
-
Nichols, J.W.1
Hill, M.W.2
Bangham, A.D.3
Deamer, D.W.4
-
74
-
-
0019004778
-
Net Proton-Hydroxyl Permeability of Large Unilamellar Liposomes Measured by an Acid-Base Titration Technique
-
Nichols, J. W.; Deamer, D. W. Net Proton-Hydroxyl Permeability of Large Unilamellar Liposomes Measured by an Acid-Base Titration Technique Proc. Natl. Acad. Sci. U. S. A. 1980, 77, 2038 - 2042
-
(1980)
Proc. Natl. Acad. Sci. U. S. A.
, vol.77
, pp. 2038-2042
-
-
Nichols, J.W.1
Deamer, D.W.2
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