Developmental transitions during the evolution of plant form

Evolving Pathways: Key Themes in Evolutionary Developmental Biology

Volumn , Issue , 2008, Pages 299-315

  Langdale, Jane A ^a   Harrison, C Jill ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84927073997     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1017/CBO9780511541582.021     Document Type: Chapter

References (86)

1. Aida, M., Beis, D., Heidstra, R. et al. 2004. The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche. Cell 119, 109-120.
2. Albert, V. A., Oppenheimer, D. G. & Lindqvist, C. 2002. Pleiotropy, redundancy and the evolution of flowers. Trends in Plant Science 7, 297-301.
3. Banks, H. P. 1975. Reclassification of Psilophyta. Taxon 24, 401-413.
4. Bateman, R. M. 1994. Evolutionary developmental change in the growth architecture of fossil rhizomorphic lycopsids: scenarios conducted on cladistic foundations. Biological Reviews 69, 527-597.
5. Bateman, R. M. & DiMichele, W. A. 1994. Heterospory: the most iterative key innovation in the evolutionary history of the plant kingdom. Biological Reviews 69, 345-417.
6. Bateman, R. M., Hilton, J. & Rudall, P. J. 2006. Morphological and molecular phylogenetic context of the angiosperms: contrasting the ‘top-down’ and ‘bottom-up’ approaches used to infer the likely characteristics of the first flowers. Journal of Experimental Botany 57, 3471-3503.
7. Beerling, D. J. 2005. Leaf evolution: gases, genes and geochemistry. Annals of Botany 96, 345-352.
8. Beerling, D. J., Osborne, C. P. & Chaloner, W. G. 2001. Evolution of leaf-form in land plants linked to atmospheric CO2 decline in the Late Palaeozoic era. Nature 410, 352-354.
9. Bennett, T., Sieberer, T., Willett, B., Booker, J., Luschnig, C. & Leyser, O. 2006. The Arabidopsis MAX pathway controls shoot branching by regulating auxin transport. Current Biology 16, 553-563.
10. Bierhorst, D. W. 1977. On the stem apex, leaf initiation and early leaf ontogeny in filicalean ferns. American Journal of Botany 64, 125-152.
11. Bommert, P., Lunde, C., Nardmann, J. et al. 2005. Thick tassel dwarf1 encodes a putative maize ortholog of the Arabidopsis CLAVATA1 leucine-rich repeat receptorlike kinase. Development 132, 1235-1245.
12. Booker, J., Sieberer, T., Wright, W. et al. 2005. MAX1 encodes a cytochrome P450 family member that acts downstream of MAX3/4 to produce a carotenoid- derived branch-inhibiting hormone. Developmental Cell 8, 443-449.
13. Bower, F. 1935. Primitive Land Plants. London: Macmillan.
14. Boyce, C. K., Cody, G. D., Fogel, M. L. et al. 2003. Chemical evidence for cell wall lignification and the evolution of tracheids in Early Devonian plants. International Journal of Plant Science 164, 691-702.
15. Brand, U., Fletcher, J. C., Hobe, M., Meyerowitz, E. M. & Simon, R. 2000. Dependence of stem cell fate in Arabidopsis on a feedback loop regulated by CLV3 activity. Science 289, 617-619.
16. Byrne, M. E., Barley, R., Curtis, M. et al. 2000. ASYMMETRIC LEAVES1 mediates leaf patterning and stem cell function in Arabidopsis. Nature 408, 967-971.
17. Casamitjana, M., Nez, E., Hofhuis, H. F. et al. 2003. Suppressors implicate a CLV- like pathway in the control of Arabidopsis root meristem maintenance. Current Biology 13, 1435-1441.
18. Cook, M. E. & Friedman, W. E. 1998. Tracheid structure in a primitive extant plant provides an evolutionary link to earliest fossil tracheids. International Journal of Plant Science 159, 881-890.
19. Cooke, T. J., Poli, D. & Cohen, J. D. 2003. Did auxin play a crucial role in the evolution of novel body plans during the Late Silurian-Early Devonian radiation of land plants? In I. Poole & A. R. Helmsley (eds.) The Evolution of Plant Physiology. London: Elsevier Academic Press, pp. 85-107.
20. Crane, P. R., Herendeen, P. & Friis, E. M. 2004. Fossils and plant phylogeny. American Journal of Botany 91, 1683-1699.
21. Cronk, Q. C. B. 2001. Plant evolution and development in a post-genomic context. Nature Reviews Genetics 2, 607-619.
22. DiMichele, W. A. & Bateman, R. M. 1996. Plant paleoecology and evolutionary inference: two examples from the Paleozoic. Review of Paleobotany and Palyn- ology 90, 223-247.
23. Dolan, L., Janmaat, K., Willemsen, V. et al. 1993. Cellular organization of the Arabidopsis thaliana root. Development 119, 71-84.
24. Edwards, D., Feehan, J. & Smith, D. G. 1983. A late Wenlock flora from County Tip- perrary, Ireland. Botanical Journal of the Linnean Society 86, 19-36.
25. Endress, P. K. 2001. Origins of flower morphology. Journal of Experimental Zoology B (Molecular and Developmental Evolution) 291, 105-115.
26. Eshed, Y., Baum, S. F., Perea, J. V. & Bowman, J. L. 2001. Establishment of polarity in lateral organs of plants. Current Biology 11, 1251-1260.
27. Fairon-Demaret, M. & Li, C.-S. 1993. Lorophyton goense gen. et sp. nov. from the Lower Givetian of Belgium and a discussion of the Middle Devonian Cladox- ylopsida. Review of Palaeobotany and Palynology 77, 1-22.
28. Friedman, W. E. & Cook, M. E. 2000. The origin and early evolution of tracheids in vascular plants: integration of paleobotanical and neobotanical data. Philosophical Transactions of the Royal Society of London B 355, 857-868.
29. Friedman, W. E., Moore, R. C. & Purugganan, M. D. 2004. The evolution of plant development. American Journal of Botany 91, 1726-1741.
30. Frohlich, M. W. 2003. An evolutionary scenario for the origin of flowers. Nature Reviews Genetics 4, 559-566.
31. Galinat, W. C. 1959. The phytomer in relation to floral homologies in the American Maydea. Botanical Museum Leaflets Harvard University 19, 1-32.
32. Geldner, N., Anders, N., Wolters, H. et al. 2003. The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth. Cell 112, 219-230.
33. Geldner, N., Richter, S., Vieten, A. et al. 2004. Partial loss-of-function alleles reveal a role for GNOM in auxin transport-related, post-embryonic development of Arabidopsis. Development 131, 389-400.
34. Gillespie, W., Rothwell, G. & Schlecker, S. 1981. The earliest seeds. Nature 293, 462-464.
35. Gradstein, F., Ogg, J. & Smith, A. 2005. A Geological Time Scale 2004. Cambridge: Cambridge University Press.
36. Graham, L. E. 1985. The origin of the life cycle of land plants. American Scientist 73, 178-186.
37. Graham, L. E. 1996. Green algae to land plants: an evolutionary transition. Journal of Plant Research 109, 241-251.
38. Graham, L. E., Cook, M. E. & Busse, J. S. 2000. The origin of plants: body plan changes contributing to a major evolutionary radiation. Proceedings of the National Academy of Sciences USA 97, 4535-4540.
39. Graham, L. E. & Wilcox, L. W. 2000. The origin of alternation of generations in land plants: a focus on matrotrophy and hexose transport. Philosophical Transactions of the Royal Society of London B 355, 757-766.
40. Groover, A. & Robischon, M. 2006. Developmental mechanisms regulating secondary growth in woody plants. Current Opinion in Plant Biology 9, 55-58.
41. Harrison, C. J., Corley, S. B., Moylan, E. C. et al. 2005. Independent recruitment of a conserved developmental mechanism during leaf evolution. Nature 434, 509-514.
42. Helariutta, Y., Fukaki, H., Wysocka-Diller, J. et al. 2000. The SHORT-ROOT gene controls radial patterning of the Arabidopsis root through radial signaling. Cell 101, 555-567.
43. Irish, V. F. 2003. The evolution of floral homeotic gene function. BioEssays 25, 637-646.
44. Irish, V. F. & Litt, A. 2005. Flower development and evolution: gene duplication, diversification and redeployment. Current Opinion in Genetics and Development 15, 454-460.
45. Jackson, D., Veit, B. & Hake, S. 1994. Expression of maize Knotted1 related homeo- box genes in the shoot apical meristem predicts patterns of morphogenesis in the vegetative shoot. Development 120, 404-413.
46. Johri, B. M. 1984. Embryology of Angiosperms. Berlin: Springer.
47. Kamiya, N., Nagasaki, H., Morikami, A., Sato, Y. & Matsuoka, M. 2003. Isolation and characterization of a rice WUSCHEL-type homeobox gene that is specifically expressed in the central cells of a quiescent center in the root apical meristem. Plant Journal 35, 429-441.
48. Kato, M. & Akiyama, H. 2005. Interpolation hypothesis for origin of the vegetative sporophyte of land plants. Taxon 54, 443-450.
49. Kenrick, P. 1994. Alternation of generations in land plants: new phylogenetic and paleobotanical evidence. Biological Reviews 69, 293-330.
50. Kenrick, P. & Crane, P. R. 1991. Water conducting cells in early fossil land plants: implications for the early evolution of tracheophytes. Botanical Gazette 152, 335-356.
51. Kenrick, P. & Crane, P. R. 1997. The Origin and Early Diversification of Land Plants: A Cladistic Study. London: Smithsonian Institution Press.
52. Kenrick, P. 2002. The telome theory. In Q. C. B. Cronk, R. M. Bateman & J. A. Hawkins (eds.) Developmental Genetics and Plant Evolution. London: Taylor and Francis, pp. 365-387.
53. Kidston, R. & Lang, W. H. 1920. On Old Red Sandstone plants showing structure from the Rhynie Chert bed, Aberdeenshire. Part III. Asteroxylon mackiei. Transactions of the Royal Society of Edinburgh 52, 643-680.
54. Kieffer, M., Stern, Y., Cook, H. et al. 2006. Analysis of the transcription factor WUSCHEL and its functional homologue in Antirrhinum reveals a potential mechanism for their roles in meristem maintenance. Plant Cell 18, 560-573.
55. Kubo, M., Udagawa, M., Nishikubo, N. et al. 2005. Transcription switches for pro- toxylem and metaxylem vessel formation. Genes & Development 19, 1855-1860.
56. Lewis, I. A. & McCourt, R. M. 2004. Green algae and the origin of land plants. American Journal of Botany 91, 1535-1556.
57. Marchant, H. J. & Pickett-Heaps, J. D. 1973. Mitosis and cytokinesis in Coleochaete scutata. Journal Of phycology 9, 461-471.
58. Mayer, K. F. X., Schoof, H., Haecker, A. et al. 1998. Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem. Cell 95, 805-815.
59. McCann, M. C. 1997. Tracheary element formation: building up to a dead end. Trends in Plant Science 2, 333-338.
60. McConnell, J. R., Emery, J., Eshed, Y. et al. 2001. Role of PHABULOSA and PHAVO- LUTA in determining radial patterning in shoots. Nature 411, 709-713.
61. McHale, N. A. & Koning, R. E. 2004a. PHANTASTICA regulates development of the adaxial mesophyll in Nicotiana leaves. Plant Cell 16, 1251-1262.
62. McHale, N. A. & Koning, R. E. 2004b. MicroRNA-directed cleavage of Nicotiana syl- vestris PHAVOLUTA mRNA regulates the vascular cambium and structure of apical meristems. Plant Cell 16, 1730-1740.
63. Mele, G., Ori, N., Sato, Y. & Hake, S. 2003. The knotted1 -like homeobox gene BRE- VIPEDICELLUS regulates cell differentiation by modulating metabolic pathways. Genes & Development 17, 2088-2093.
64. Nakajima, K., Sena, G., Nawy, T. & Benfey, P. N. 2001. Intercellular movement of the putative transcription factor SHR in root patterning. Nature 413, 307-311.
65. Oh, S. H., Park, S. & Han, K.-Y. 2003. Transcriptional regulation of secondary growth in Arabidopsis thaliana. Journal of Experimental Botany 54, 2709-2722.
66. Palmer, J. D., Soltis, D. E. & Chase, M. W. 2004. The plant tree of life: an overview and some points of view. American Journal of Botany 91, 1437-1445.
67. Phillips, T. L. & DiMichele, W. A. 1992. Comparative ecology and life-history biology of arborescent lycopsids in Late Carboniferous swamps of Euroamer- ica. Annals of the Missouri Botanical Garden 79, 560-588.
68. Pryer, K. M., Schneider, H., Smith, A. R. et al. 2001. Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants. Nature 409, 618-622.
69. Qiu, Y. L., Li, L., Wang, B. et al. 2006. The deepest divergences in land plants inferred from phylogenomic evidence. Proceedings of the National Academy of Sciences of the USA 103, 15511-15516.
70. Raven, J. A. & Edwards, D. 2001. Roots: evolutionary origins and biogeochemical significance. Journal of Experimental Botany 52, 381-401.
71. Sabatini, S., Heidstra, R., Wildwater, M. & Scheres, B. 2003. SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristem. Genes & Development 17, 354-358.
72. Scheres, B., Wolkenfeit, H., Willemsen, V. et al. 1994. Embryonic origin of the Arabidopsis primary root and root meristem initials. Development 120, 2475-2487.
73. Schneeberger, R., Tsiantis, M., Freeling, M. & Langdale, J. A. 1998. The rough sheath2 gene negatively regulates homeobox gene expression during maize leaf development. Development 125, 2857-2865.
74. Schoof, H., Lenhard, M., Haecker, A. et al. 2000. The stem cell population of Arabi- dopsis shoot meristems is maintained by a regulatory loop between the CLAVATA and WUSCHEL genes. Cell 100, 635-644.
75. Smith, L. G., Greene, B., Veit, B. & Hake, S. 1992. A dominant mutation in the maize homeobox gene, Knotted-1, causes its ectopic expression in leaf cells with altered fates. Development 116, 21-30.
76. Stein, W. E. & Boyer, J. S. 2006. Evolution of land plant architecture: beyond the telome theory. Paleobiology 32, 450-482.
77. Taguchi-Shiobara, F., Yuan, Z., Hake, S. & Jackson, D. 2001. The fasciated ear2 gene encodes a leucine-rich repeat receptor-like protein that regulates shoot mer- istem proliferation in maize. Genes & Development 15, 2755-2766.
78. Tattersall, A. D., Turner, L., Knox, M. R. et al. 2005. The mutant crispa reveals multiple roles for PHANTASTICA in pea compound leaf development. Plant Cell 17, 1046-1060.
79. Theißen, G., Becker, A., Winter, K.-U. et al. 2002. How land plants learned their floral ABCs: the role of MADS box genes in the evolutionary origin of flowers. In Q.C. B. Cronk, R. M. Bateman & J. A. Hawkins (eds.) Developmental Genetics and Plant Evolution. London: Taylor and Francis, pp. 173-205.
80. Timmermans, M. C. P., Hudson, A., Becraft, P. W. & Nelson, T. 1999. ROUGH SHEATH2: A myb protein that represses knox homeobox genes in maize lateral organ primordia. Science 284, 151-153.
81. Tsiantis, M., Schneeberger, R., Golz, J. F., Freeling, M. & Langdale, J. A. 1999. The maize rough sheath2 gene and leaf development programs in monocot and dicot plants. Science 284, 154-156.
82. van den Berg, C., Willemsen, V., Hendricks, G., Weisbeek, P. & Scheres, B. 1997. Short-range control of cell differentiation in the Arabidopsis root meristem. Nature 390, 287-289.
83. Waites, R. & Hudson, A. 1995. Phantastica: a gene required for dorsoventrality of leaves in Antirrhinum. Development 121, 2143-2154.
84. Wellman, C. H., Osterloff, P. L. & Mohiuddin, U. 2003. Fragments of the earliest land plants. Nature 425, 282-285.
85. Wysocka-Diller, J. W., Helariutta, Y., Fukaki, H., Malamy, J. E. & Benfey, P. N. 2000. Molecular analysis of SCARECROW function reveals a radial patterning mechanism common to root and shoot. Development 127, 595-603.
86. Zimmermann, W. 1965. Die Telomtheorie. Stuttgart: Fischer.