Did auxin play a crucial role in the evolution of novel body plans during the Late Silurian-Early Devonian radiation of land plants?

The Evolution of Plant Physiology: From whole plants to ecosystems

Volumn , Issue , 2004, Pages 85-107

  Cooke, Todd J ^a   Poli, DorothyBelle ^a   Cohen, Jerry D ^b  

^a Bldg 142   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84903346207     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-012339552-8/50006-8     Document Type: Chapter

References (126)

1. R. Aloni (1995) The induction of vascular tissues by auxin and cytokinin. PJ Davies,(Eds) Plant Hormones: Physiology, Biochemistry and Molecular Biology 2nd edn Dordrecht: Kluwer Academic Publishers 531-546.
2. W. Arthur (2002) The emerging conceptual framework of evolutionary developmental biology. Nature 415 757-764.
3. KE von Baer (1828) Entwicklungsgeschichte der Tiere: Beobachtung und Reflexion Konigsberg: Bornträger
4. SL Baldauf, AJ Roger, I Wenk-Siefert and WF Doolittle (2000) A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290 972-977.
5. JWO Ballard, GJ Olsen, DP Faith, et al. (1992) Evidence from 12S ribosomal RA sequences that onychophorans are modified arthropods. Science 258 1345-1348.
6. MK Barton and RS Poethig (1993) Formation of the shoot apical meristem in Arabidopsis thaliana: an analysis of development in the wild type and shootmeristemles mutant. Development 119 823-831.
7. T Berleth, J Mattisson and CS Hardtke (2000) Vascular continuity and auxin signals. Trends in Plant Science 5 387-393.
8. CM Berry and M. Fairon-Demaret (2001) The middle Devonian flora revisited. PG Gensel, D Edwards,(Eds) Plants Invade the Land: Evolutionary and Ecological Perspectives New York: Columbia University Press 120-139.
9. G Bharathan, BJ Janssen, EA Kellogg and N Sinha (1999) Pgylogenetic relationships and evolution of the KNOTTED class of plant homeodomain proteins. Molecular Biology and Evolution 16 553-563.
10. DW Bierhorst (1971) Morphology of Vascular Plants New York: Macmillan
11. HC Bold, CI Alexopoulos and T Delevoryas (1987) 5th edn Morphology of Plants and Fungi New York: Harper & Row
12. FO Bower (1935) Primitive Land Plants London: Macmillan
13. L. Bromham, A Rambaut, R Fortey, et al. (1998) Testing the Cambrian explosion hypothesis by using a molecular dating technique. Proceedings of the National Academy of Sciences (USA) 95 12386-12389.
14. DH Campbell (1918) 3rd edn The Structur and Development of Ferns New York: MacMillan
15. SB Carroll, JK Grenier and SC Weatherbee (2001) From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design Malden, Massachusetts: Blackwell Science
16. I Casimiro, A Marchant, RP Bhalerao, et al. (2001) Auxin transport promotes Arabidopsis lateral root initiation. Plant Cell 13 843-852.
17. CEM Champagne and NW Ashton (2001) Ancestry of KNOX genes revealed by bryophyte Physcomitrella patens homologs. New Phytologist 150 23-36.
18. RL Chan, GM Gago, CM Palena and DH Gonzalez (1998) Homeoboxes in plant development. Biochimica et Biophysica Acta 1442 1-19.
19. JG Chen, H Ullah, JC Young, et al. (2001) ABP1 is required for organized cell elongation and division in Arabidopsis embryogenesis. Genes and Development 15 902-911.
20. RN Chopra and BD Vashistha (1990) The effect of auxins and antiauxins on shoot-bud induction and morphology in the moss, Bryum atrovirens Will. ex Brid. Australian Journal of Botany 38 177-184.
21. ES Coen and EM Meyerowitz (1991) The war of the whorls: Genetic interactions controlling flower development. Nature 353 31-37.
22. S. Conway Morris (2000) The Cambrian ‘explosion’: Slow-fuse or megatonnage? Proceedings of the National Academy of Science (USA) 97 4426-4429.
23. TJ Cooke, DB Poli, AE Sztein and JD Cohen (2002) Evolutionary patterns in auxin action. Plant Molecular Biology 49 319-338.
24. QCB Cronk (2001) Plant evolution and development in a post-genomic context. Nature Reviews Genetics 2 607-619.
25. H. Crum (2001) Structural Diversity of Bryophytes Ann Arbor, Michigan: University of Michigan Herbarium
26. JE Dibb-Fuller and DA Morris (1992) Studies on the evolution of auxin carriers and phytotropin receptors: Transmemebrane auxin transport in unicellular and multicellular Chlorophyta. Planta 186 219-226.
27. AJ Eames (1936) Morphology of Vascular Plants: Lower Groups New York: McGraw-Hill
28. D. Edwards (2000) The role of Mid-Palaeozoic mesofossils in the detection of early bryophytes. Philosophical Transactions of the Royal Society of London, Series B 355 733-755.
29. D Edwards and L. Axe (2000) Novel conducting tissues in Lower Devonian plants. Botanical Journal of the Linnean Society 134 383-399.
30. D Edwards, JG Duckett and JB Richardson (1995) Hepatic characteris in the earliest land plants. Nature 374 635-636.
31. D Edwards and C. Wellman (2001) Embryophytes on land: The Ordovician to Lochkovian (Lower Devonian) record. PG Gensel, D Edwards,(Eds) Plants Invade the Land: Evolutionary and Ecological Perspectives New York: Columbia University Press 3-28.
32. D Erwin, J Valentine and D. Jablonski (1997) The origin of animal body plans. American Scientist 85 126-137.
33. C Fischer, V Speth, S Fleig-Eberenz and G. Neuhaus (1997) Induction of zygotic polyembryos in wheat: influence of auxin polar transport. Plant Cell 9 1767-1780.
34. C Fischer-Iglesias, B Sundberg, G Neuhaus and AM Jones (2001) Auxin distribution and transport during embryonic pattern formation in wheat. Plant Journal 26 115-129.
35. R. Fortey (2001) The Cambrian explosion exploded. Science 293 438-439.
36. DJ Gaal, SJ Dufresne and NC Maravolo (1982) Transport of 14C-indoleacetic acid in the hepatic Marchantia polymorpha. The Bryologist 85 410-418.
37. U Geier, O Werner and M Bopp (1990) Indole-3-acetic acid uptake in isolated protoplasts of the moss Funaria hygrometrica. Physiologia Plantarum 80 584-592.
38. D Gellon and W. McGinnis (1998) Shaping animal body plans in development and evolution by modulation of Hox expression patterns. Bioessays 20 116-125.
39. EM Gifford and AS Foster (1989) 3rd edn Morphology and Evolution of Vascular Plants New York: Freeman
40. SF Gilbert (2000) 6th edn Developmental Biology Sunderland, Massachusetts: Sinaeuer Associates
41. JW Goethe (1790) Versuch die Metamorphose der Pflanzen zu erklären. Gotha: Ettinger
42. SJ Gould (1989) Wonderful Life: The Burgess Shale and the Nature of History New York: No: Norton
43. LE Graham (1993) Origin of Land Plants New York: Wiley
44. LE Graham, ME Cook and JS Busse (2000) The origin of plants: Body plan changes contributing to a major evolutionary radiation. Proceedings of the National Academy of Sciences (USA) 97 4535-4540.
45. LE Graham and J. Gray (2001) The origin, morphology, and ecophysiology of early embryophytes: Neontological and paleontological perspectives. PG Gensel, D Edwards,(Eds) Plants Invade the Land: Evolutionary and Ecological Perspectives New York: Columbia University Press 140-158.
46. LE Graham and LW Wilcox (2000) The origin of alternation of generations in land plants: A focus on matrotrophy and hexose transport. Philosophical Transactions of the Royal Society of London, Series B 355 755-767.
47. J. Gray (1985) The microfossil record of early land plants: Advances in understanding of early terrestrialization, 1970–1984. Philosophical Transactions of the Royal Society of London, Series B 309 167-192.
48. PA Groff and DR Kaplan (1988) The relation of root systems to shoot systems in vascular plants. Botanical Review 54 387-422.
49. B. Haccius (1952) Die Embryoentwicklung bei Ottelia alismoides und das Problem des terminalen Monokotylen-Keimblatts. Planta 40 443-460.
50. B Haccius (1960) Experimentell induzierte Einkeimblättrigkeit bei Eranthis hiemalis. II. Monokotylie durch Pheylborsäure. Planta 54 482-497.
51. K Hadfi, V Speth and G Neuhaus (1998) Auxin-induced developmental patterns in Brassica juncea embryos. Development 125 879-887.
52. T. Hamann (2001) The role of auxin in apical-basal pattern formation during Arabidopsis embryogenesis. Journal of Plant Growth Regulation 20 292-299.
53. DS Heckman, DM Geiser, BR Eidell, et al. (2001) Molecular evidence for the early colonization of land by fungi and plants. Science 293 1129-1133.
54. K Henschel, R Kofuji, M Hasebe, et al. (2002) Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens. Molecular Biology and Evolution 19 801-814.
55. JE Holloway (1921) Further studies on the prothallus, embryo, and young sporophyte of Tmesipteris. Transactions of the New Zealand Institute 53 386-422.
56. JE Holloway (1939) The gametophyte, embryo, and young rhizome of Psilotum triquetrum Swartz. Annals of Botany 3 313-336.
57. DR Kaplan (2001) The science of plant morphology: Definition, history, and role in modern biology. American Journal of Botany 88 1711-1741.
58. DR Kaplan and TJ Cooke (1997) Fundamental concepts in the embryogenesis of dicotyledons: a morphological interpretation of embryo mutants. Plant Cell 9 1903-1919.
59. KG Karol, RM McCourt, MT Cimino and CF Delwiche (2001) The closest living relatives to the land plants. Science 294 2351-2353.
60. KN Kaul, GC Mitra and BK Tripathi (1962) Responses of Marchantia in aseptic culture to well-known auxins and antiauxins. Annals of Botany 26 447-467.
61. P. Kenrick (2000) The relationships of vascular plants. Philosophical Transactions of the Royal Society of London, Series B 355 847-855.
62. P Kenrick and PR Crane (1997) The Origin and Early Diversification of Land Plants: A Cladistic Study Washington: Smithsonian Institution Press
63. D Klambt, B Knauth and I Dittmann (1992) Auxin dependent growth of rhizoids of Chara globularis. Physiologia Plantarum 85 537-540.
64. AH Knoll and S. Carroll (1999) Early animal evolution: Emerging views from comparative biology and geology. Science 284 2129-2137.
65. NT Krogan and NW Ashton (2000) Ancestry of plant MADS-box genes revealed by bryophyte (Physcomitrella patens) homologues. New Phytologist 147 505-517.
66. S Kumra and RN Chopra (1987) Callus initiation, its growth and differentiation in the liverwort Asterella wallichiana (Lehm. et Lindenb.) Groelle I. Effect of auxins and cytokinins. Journal of the Hattori Botanical Laboratory 63 237-245.
67. M Lal and NN Bhandari (1968) The development of sex organs and sporophyte in Physcomitrium cyathicarpum Mitt. The Bryologist 71 11-20.
68. C-M Liu, Z-H Xu and N-H Chua (1993) Auxin polar transport is essential for the establishment of bilateral symmetry during early plant embryogenesis. Plant Cell 5 621-630.
69. K Ljung, AK Hull, M Kowalczyk, et al. (2002) Biosynthesis, conjugation, catabolism and homeostasis of indole-3-acetic acid in Arabidopsis thaliana. Plant Molecular Biology 49 249-272.
70. JA Long, EI Moan, JI Medford and MK Barton (1996) A member of the KNOTTED class of home-odomain proteins encoded by the STM gene of Arabidopsis. Nature 379 66-69.
71. P Lu and JA Jernstedt (1996) Rhizophore and root development in Selaginella martensii: Meristem transitions and identity. International Journal of Plant Sciences 157 180-194.
72. Y Ma and TA Steeves (1992) Auxin effects on vascular differentiation in Ostrich fern. Annals of Botany 70 277-282.
73. NC Maravolo (1976) Polarity and localization of auxin movement in the hepatic, Marchantia polymorpha. American Journal of Botany 63 529-531.
74. RD Meicenheimer (1981) Changes in Epilobium phyllotaxy induced by N-1-naphthylphthalmic acid and α-4-chlorophenoxyisobutric acid. American Journal of Botany 68 1139-1154.
75. EM Meyerowitz (2002) Plants compared to animals: The broadest comparative study of development. Science 295 1482-1485.
76. L Michalczuk, TJ Cooke and JD Cohen (1992) Auxin levels at different stages of carrot somatic embryogenesis. Phytochemistry 31 1097-1103.
77. L Michalczuk, DM Ribnicky, TJ Cooke and JD Cohen (1992) Regulation of indole-3-acetic acid biosynthetic pathways in carrot cell cultures. Plant Physiology 100 1346-1353.
78. DL Nickrent, CL Parkinson, JD Palmer and RJ Duff (2000) Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants. Molecular Biology and Evolution 17 1885-1895.
79. KJ Niklas (1997) The Evolutionary Biology of Plants Chicago: University of Chicago Press
80. KJ Niklas (2000) The evolution of plant body plans: A biomechanical perspective. Annals of Botany 85 411-438.
81. LP Nyman and EG Cutter (1981) Auxin-cytokinin interaction in the inhibition, release, and morphology of gametophore buds of Plagiommium cupidatum from apical dominance. Canadian Journal of Botany 59 750-760.
82. DJ Paolillo (1963) The Developmental Anatomy of Isoetes Urbana: University of Illinois Press
83. DJ Paolillo (1982) Meristems and evolution: Developmental correspondence among the rhizomorphs of the lycopsids. American Journal of Botany 69 1032-1042.
84. JN Partanen and CR Partanen (1963) Observations on the culture of roots of the bracken fern. Canadian Journal of Botany 41 1657-1661.
85. KJ Peterson and EH Davidson (2000) Regulatory evolution and the origin of the bilaterians. Proceedings of the National Academy of Sciences (USA) 97 4430-4433.
86. RL Peterson (1970) Bud formation at the root apex of Ophioglossum petiolatum. Phytomorphology 20 183-190.
87. KM Pryer, H Schneider, AR Smith, et al. (2001) Horsetails and ferns are a monoplyletic group and the closest living relatives to seed plants. Nature 409 618-622.
88. Y-L Qiu, Y Cho, JC Cox and JD Palmer (1998) The gain of three mitochondrial introns identifies liverworts as the earliest land plants. Nature 394 671-674.
89. LF Randolph (1936) Developmental morphology of the caryopsis of maize. Journal of Agricultural Research 53 881-916.
90. RA Raff (1996) The Shape of Life: Genes, Development, and the Evolution of Animal Form Chicago: University of Chicago Press
91. RC Reed, SR Brady and GK Muday (1998) Inhibition of auxin movement from the shoot into the root inhibits lateral root development in Arabidopsis. Plant Physiology 118 1369-1378.
92. D Reinhardt, T Mandel and C Kuhlemeier (2000) Auxin regulates the initiation and radial position of plant lateral organs. Plant Cell 12 507-518.
93. KS Renzaglia, RJ Duff, DL Nickrent and DJ Garbary (2000) Vegetative and reproductive innovations of early land plants: Implications for a unified phylogeny. Philosophical Transactions of the Royal Society of London, Series B 355 769-793.
94. DM Ribnicky, JD Cohen, WS Hu and TJ Cooke (2002) An auxin surge following fertilization in carrots: a general mechanism for regulating plant totipotency. Planta 214 505-509.
95. DM Ribnicky, N Ilic, JD Cohen and TJ Cooke (1996) The effects of exogenous auxins on endogenous indole-3-acetic acid metabolism. The implications for carrot somatic embryogenesis. Plant Physiology 112 549-558.
96. LW Roberts, PB Gahan and R Aloni (1988) Vascular Differentiation and Plant Growth Regulators Berlin: Springer-Verlag
97. R de Rosa, JK Grenier, T Andreeva, et al. (1999) Hox genes in brachiopods and priapulids and protostome evolution. Nature 399 722-776.
98. S Rose and M Bopp (1983) Uptake and polar transport of indoleacetic acid in moss rhizoids. Physiologia Plantarum 58 57-61.
99. S Rose, PH Rubery and M Bopp (1983) The mechanism of auxin uptake and accumulation in moss protonemata. Physiologia Plantarum 58 52-56.
100. T Sachs (1991) Cell polarity and tissue patterning in plants. Development (Supplement) 1 83-93.
101. FM Schiavone and TJ Cooke (1987) Unusual patterns of somatic embryogenesis in the domesticated carrot: Developmental effects of exogenous auxins and auxin transport inhibitors. Cell Differentation 21 53-62.
102. MW Slack, PWH Holland and CF Graham (1993) The zootype and the phylotypic stage. Nature 361 490-492.
103. GM Smith (1955) Cryptogamic Botany: Volume II, Bryophytes and Pteridophytes New York: McGraw-Hill
104. R Souèges (1931) L'embryon chez Sagittaria sagittaefolia L. Le cone végétatif de la tige et l'extrémité radiculaire chez les monocotylédones. Annales de Sciences Naturelles. Botanique et Biologie Végétale, 10e Série 13 353-402.
105. M Souter and K Lindsey (2000) Polarity and signalling in plant embryogenesis. Journal of Experimental Botany 51 971-983.
106. W Stein (1993) Modelling the evolution of stelar architecture in vascular plants. International Journal of Plant Science 154 229-263.
107. T Steinmann, N Geldner, M Grebe, et al. (1999) Coordinated polar localization of auxin efflux carrier PIN1 by GNOM ARF GEF. Science 286 316-318.
108. BGL Swamy and KK Laksmanan (1962) The origin of epicotyledonary meristem and cotyledon in Halophila ovata Gaudich. Annals of Botany 26 243-249.
109. AE Sztein, JD Cohen and TJ Cooke (2000) Evolutionary patterns in the auxin metabolism of green plants. International Journal of Plant Sciences 161 849-859.
110. AE Sztein, JD Cohen, IG de la Fuente and TJ Cooke (1999) Auxin metabolism in mosses and liverworts. American Journal of Botany 86 1544-1555.
111. AE Sztein, JD Cohen, JP Slovin and TJ Cooke (1995) Auxin metabolism in representative land plants. American Journal of Botany 82 1514-1521.
112. TN Taylor and EL Taylor (1993) The Biology and Evolution of Fossil Plants Englewood Cliffs, New Jersey: Prentice Hall
113. G Theissen, A Becker, A Di Rosa, et al. (2000) A short history of MADS-box genes in plants. Plant Molecular Biology 42 115-149.
114. G Theissen, T Munster and K Henschel (2001) Why don't mosses flower? New Phytologist 150 1-5.
115. RJ Thomas (1980) Cell elongation in hepatics: The seta system. Bulletin of the Torrey Botanical Club 107 339-345.
116. W Troll (1943) Vergleichende Morphologie der höheren Pflanzen. Erster Band Vegetationsorgane. Dritter Teil Berlin: Gebrüder Bomtraeger
117. W Troll (1959) Allgemeine Botanik Stuttgart: Enke Verlag
118. C Uggla, EJ Mellerowicz and B Sundberg (1998) Indole-3-acetic acid controls cambial growth in Scots pine by positional signaling. Plant Physiology 117 113-121.
119. C Uggla, T Moritz, G Sandberg and B Sundberg (1996) Auxin as a positional signal in pattern formation in plants. Proceedings of the National Academy of Sciences (USA) 93 9282-9286.
120. JW Valentine, D Jablonski and DH Erwin (1999) Fossils, molecules and embryos: New perspectives on the Cambrian explosion. Development 126 851-859.
121. F Vergara-Silva, L Martinez-Castilla and E Alvarez-Buylla (2000) MADS-box genes: development and evolution of plant body plans. Journal of Phycology 36 803-812.
122. CW Wardlaw (1955) Embryogenesis in Plants New York: Wiley
123. CW Wardlaw (1957) Experimental and analytical studies of pteridophytes. XXXVII. The effects of direct applications of various substances to the shoot apex of Dryopteris austriaca (D. aristata). Annals of Botany 21 427-437.
124. RW Williams (1998) Plant homeobox genes: Many functions stem from a common motif. Bioessays 20 280-282.
125. ZS Wochok and IM Sussex (1975) Morphogenesis in Selaginella. III. Meristem determination and cell differentiation. Developmental Biology 47 376-383.
126. T Yamashita (1976) Über die Embryo- und Wurzelentwicklung bei Aponogeton madagascariensis. Journal of the Faculty of Science, University of Tokyo. Section III. Botany 12 37-63.