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Volumn 10, Issue 3, 2015, Pages

Identification of reference genes for relative quantification of circulating microRNAs in bovine serum

Author keywords

[No Author keywords available]

Indexed keywords

HEMOGLOBIN; MICRORNA; MICRORNA 101; MICRORNA 127; MICRORNA 16; MICRORNA 451; MICRORNA 93; UNCLASSIFIED DRUG;

EID: 84926609660     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0122554     Document Type: Article
Times cited : (20)

References (35)
  • 1
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • PMID: 14744438
    • Bartel DP (2004) MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell 116: 281-297. PMID: 14744438
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 2
    • 79953202200 scopus 로고    scopus 로고
    • Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma
    • PMID: 21383194
    • Arroyo JD, Chevillet JR, Kroh EM, Ruf IK, Pritchard CC, Gibson DF, et al. (2011) Argonaute2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma. Proc Natl Acad Sci USA 108: 5003-5008. doi: 10.1073/pnas.1019055108 PMID: 21383194
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 5003-5008
    • Arroyo, J.D.1    Chevillet, J.R.2    Kroh, E.M.3    Ruf, I.K.4    Pritchard, C.C.5    Gibson, D.F.6
  • 3
    • 78149409316 scopus 로고    scopus 로고
    • Export of microRNAs and microRNA-protective protein by mammalian cells
    • PMID: 20615901
    • Wang K, Zhang S, Weber J, Baxter D, Galas DJ (2010) Export of microRNAs and microRNA-protective protein by mammalian cells. Nucleic Acids Res 38: 7248-7259. doi: 10.1093/nar/gkq601 PMID: 20615901
    • (2010) Nucleic Acids Res , vol.38 , pp. 7248-7259
    • Wang, K.1    Zhang, S.2    Weber, J.3    Baxter, D.4    Galas, D.J.5
  • 4
    • 84856781208 scopus 로고    scopus 로고
    • Identification of mouse serum miRNA endogenous references by global gene expression profiles
    • PMID: 22348064
    • Mi QS, Weiland M, Qi RQ, Gao XH, Poisson LM, Zhou L (2012) Identification of mouse serum miRNA endogenous references by global gene expression profiles. PLoS One 7: e31278. doi: 10.1371/journal.pone.0031278 PMID: 22348064
    • (2012) PLoS One , vol.7 , pp. e31278
    • Mi, Q.S.1    Weiland, M.2    Qi, R.Q.3    Gao, X.H.4    Poisson, L.M.5    Zhou, L.6
  • 5
    • 84864055685 scopus 로고    scopus 로고
    • Identification of suitable reference genes for qPCR analysis of serum microRNA in gastric cancer patients
    • PMID: 22198701
    • Song J, Bai Z, Han W, Zhang J, Meng H, Bi J, et al. (2012) Identification of suitable reference genes for qPCR analysis of serum microRNA in gastric cancer patients. Dig Dis Sci 57: 897-904. doi: 10.1007/s10620-011-1981-7 PMID: 22198701
    • (2012) Dig Dis Sci , vol.57 , pp. 897-904
    • Song, J.1    Bai, Z.2    Han, W.3    Zhang, J.4    Meng, H.5    Bi, J.6
  • 6
    • 84878707685 scopus 로고    scopus 로고
    • Circulating microRNAs: A novel class of potential biomarkers for diagnosing and prognosing central nervous system diseases
    • PMID: 23633081
    • Jin XF, Wu N, Wang L, Li J (2013) Circulating microRNAs: A novel class of potential biomarkers for diagnosing and prognosing central nervous system diseases. Cell Mol Neurobiol 33: 601-613. doi: 10.1007/s10571-013-9940-9 PMID: 23633081
    • (2013) Cell Mol Neurobiol , vol.33 , pp. 601-613
    • Jin, X.F.1    Wu, N.2    Wang, L.3    Li, J.4
  • 7
    • 84885687775 scopus 로고    scopus 로고
    • Identification of circulating miRNA biomarkers based on global quantitative real-time PCR profiling
    • 4-1891-3-4
    • Kang K, Peng X, Luo J, Gou D (2012) Identification of circulating miRNA biomarkers based on global quantitative real-time PCR profiling. J Anim Sci Biotechnol 3: 4-1891-3-4.
    • (2012) J Anim Sci Biotechnol , vol.3
    • Kang, K.1    Peng, X.2    Luo, J.3    Gou, D.4
  • 8
    • 42449098100 scopus 로고    scopus 로고
    • Normalization of microRNA expression levels in quantitative RT-PCR assays: Identification of suitable reference RNA targets in normal and cancerous human solid tissues
    • PMID: 18375788
    • Peltier HJ, Latham GJ (2008) Normalization of microRNA expression levels in quantitative RT-PCR assays: Identification of suitable reference RNA targets in normal and cancerous human solid tissues. RNA 14: 844-852. doi: 10.1261/rna.939908 PMID: 18375788
    • (2008) RNA , vol.14 , pp. 844-852
    • Peltier, H.J.1    Latham, G.J.2
  • 9
    • 79959984920 scopus 로고    scopus 로고
    • Identification of miR-23a as a novel microRNA normalizer for relative quantification in human uterine cervical tissues
    • PMID: 21519184
    • Shen Y, Li Y, Ye F, Wang F, Wan X, Lu W, et al. (2011) Identification of miR-23a as a novel microRNA normalizer for relative quantification in human uterine cervical tissues. Exp Mol Med 43: 358-366. PMID: 21519184
    • (2011) Exp Mol Med , vol.43 , pp. 358-366
    • Shen, Y.1    Li, Y.2    Ye, F.3    Wang, F.4    Wan, X.5    Lu, W.6
  • 11
    • 84862702761 scopus 로고    scopus 로고
    • Reference miRNAs for miRNAome analysis of urothelial carcinomas
    • PMID: 22745731
    • Rater N, Meyer HA, Jung M, Mollenkopf HJ, Wanger I, Miller K, et al. (2012) Reference miRNAs for miRNAome analysis of urothelial carcinomas. PLoS One 7:e39309. doi: 10.1371/journal.pone.0039309 PMID: 22745731
    • (2012) PLoS One , vol.7 , pp. e39309
    • Rater, N.1    Meyer, H.A.2    Jung, M.3    Mollenkopf, H.J.4    Wanger, I.5    Miller, K.6
  • 12
    • 82255162879 scopus 로고    scopus 로고
    • Identification of suitable endogenous control microRNA genes in normal pig tissues
    • PMID: 22111626
    • Gu Y, Li M, Zhang K, Chen L, Jiang AA, Wang J, et al. (2011) Identification of suitable endogenous control microRNA genes in normal pig tissues. Anim Sci J 82: 722-728. doi: 10.1111/j.1740-0929.2011.00908.x PMID: 22111626
    • (2011) Anim Sci J , vol.82 , pp. 722-728
    • Gu, Y.1    Li, M.2    Zhang, K.3    Chen, L.4    Jiang, A.A.5    Wang, J.6
  • 13
    • 84872844473 scopus 로고    scopus 로고
    • Determination of reference micro-RNAs for relative quantification in porcine tissues
    • PMID: 22970213
    • Timoneda O, Balcells I, Cordoba S, Castello A, Sanchez A (2012) Determination of reference micro-RNAs for relative quantification in porcine tissues. PLoS One 7: e44413. doi: 10.1371/journal.pone.0044413 PMID: 22970213
    • (2012) PLoS One , vol.7 , pp. e44413
    • Timoneda, O.1    Balcells, I.2    Cordoba, S.3    Castello, A.4    Sanchez, A.5
  • 14
    • 77953192081 scopus 로고    scopus 로고
    • Plasma microRNAs are promising novel biomarkers for early detection of colorectal cancer
    • PMID: 19876917
    • Huang Z, Huang D, Ni S, Peng Z, Sheng W, Du X (2010) Plasma microRNAs are promising novel biomarkers for early detection of colorectal cancer. Int J Cancer 127: 118-126. doi: 10.1002/ijc.25007 PMID: 19876917
    • (2010) Int J Cancer , vol.127 , pp. 118-126
    • Huang, Z.1    Huang, D.2    Ni, S.3    Peng, Z.4    Sheng, W.5    Du, X.6
  • 15
    • 43449102192 scopus 로고    scopus 로고
    • Detection of elevated levels of tumour-associated microRNAs in serum of patients with diffuse large B-cell lymphoma
    • PMID: 18318758
    • Lawrie CH, Gal S, Dunlop HM, Pushkaran B, Liggins AP, Pulford K, et al. (2008) Detection of elevated levels of tumour-associated microRNAs in serum of patients with diffuse large B-cell lymphoma. Br J Haematol 141: 672-675. doi: 10.1111/j.1365-2141.2008.07077.x PMID: 18318758
    • (2008) Br J Haematol , vol.141 , pp. 672-675
    • Lawrie, C.H.1    Gal, S.2    Dunlop, H.M.3    Pushkaran, B.4    Liggins, A.P.5    Pulford, K.6
  • 16
    • 84892417146 scopus 로고    scopus 로고
    • A combination of let-7d, let-7g and let-7i serves as a stable reference for normalization of serum microRNAs
    • PMID: 24223986
    • Chen X, Liang H, Guan D, Wang C, Hu X, Cui L, et al. (2013) A combination of let-7d, let-7g and let-7i serves as a stable reference for normalization of serum microRNAs. PLoS One 8: e79652. doi: 10.1371/journal.pone.0079652 PMID: 24223986
    • (2013) PLoS One , vol.8 , pp. e79652
    • Chen, X.1    Liang, H.2    Guan, D.3    Wang, C.4    Hu, X.5    Cui, L.6
  • 17
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • research0034
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, et al. (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3: research0034.
    • (2002) Genome Biol , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6
  • 18
    • 84877040783 scopus 로고    scopus 로고
    • Evaluation of reference genes for qRT-PCR gene expression studies in whole blood samples from healthy and leukemia-virus infected cattle
    • PMID: 23548864
    • Brym P, Rusc A, Kaminski S (2013) Evaluation of reference genes for qRT-PCR gene expression studies in whole blood samples from healthy and leukemia-virus infected cattle. Vet Immunol Immunopathol 153: 302-307. doi: 10.1016/j.vetimm.2013.03.004 PMID: 23548864
    • (2013) Vet Immunol Immunopathol , vol.153 , pp. 302-307
    • Brym, P.1    Rusc, A.2    Kaminski, S.3
  • 19
    • 81255138188 scopus 로고    scopus 로고
    • Selection of suitable inner reference genes for relative quantification expression of microRNA in wheat
    • PMID: 22153247
    • Feng H, Huang X, Zhang Q, Wei G, Wang X, Kang Z (2012) Selection of suitable inner reference genes for relative quantification expression of microRNA in wheat. Plant Physiol Biochem 51: 116-122. doi: 10.1016/j.plaphy.2011.10.010 PMID: 22153247
    • (2012) Plant Physiol Biochem , vol.51 , pp. 116-122
    • Feng, H.1    Huang, X.2    Zhang, Q.3    Wei, G.4    Wang, X.5    Kang, Z.6
  • 20
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • PMID: 15289330
    • Andersen CL, Jensen JL, Orntoft TF (2004) Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64: 5245-5250. PMID: 15289330
    • (2004) Cancer Res , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 21
    • 77956268942 scopus 로고    scopus 로고
    • Validation of endogenous reference genes for RT-qPCR normalisation in bovine lymphoid cells (BL-3) infected with bovine viral diarrhoea virus (BVDV)
    • PMID: 20580438
    • Anstaett OL, Brownlie J, Collins ME, Thomas CJ (2010) Validation of endogenous reference genes for RT-qPCR normalisation in bovine lymphoid cells (BL-3) infected with bovine viral diarrhoea virus (BVDV). Vet Immunol Immunopathol 137: 201-207 doi: 10.1016/j.vetimm.2010.05.006 PMID: 20580438
    • (2010) Vet Immunol Immunopathol , vol.137 , pp. 201-207
    • Anstaett, O.L.1    Brownlie, J.2    Collins, M.E.3    Thomas, C.J.4
  • 22
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pairwise correlations
    • PMID: 15127793
    • Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - excel-based tool using pairwise correlations. Biotechnol Lett 26: 509-515. PMID: 15127793
    • (2004) Biotechnol Lett , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 23
    • 84876386633 scopus 로고    scopus 로고
    • Assessing sample and miRNA profile quality in serum and plasma or other biofluids
    • PMID: 23036329
    • Blondal T, Jensby Nielsen S, Baker A, Andreasen D, Mouritzen P, Wrang TM, et al. (2013) Assessing sample and miRNA profile quality in serum and plasma or other biofluids. Methods 59: S1-6. doi: 10.1016/j.ymeth.2012.09.015 PMID: 23036329
    • (2013) Methods , vol.59 , pp. S1-S6
    • Blondal, T.1    Jensby Nielsen, S.2    Baker, A.3    Andreasen, D.4    Mouritzen, P.5    Wrang, T.M.6
  • 24
    • 33646112913 scopus 로고    scopus 로고
    • Plasma free hemoglobin: A novel diagnostic test for assessment of the depth of burn injury
    • PMID: 16582788
    • Wong CH, Song C, Heng KS, Kee IH, Tien SL, Kumarasinghe P, et al. (2006) Plasma free hemoglobin: a novel diagnostic test for assessment of the depth of burn injury. Plast Reconstr Surg 117: 1206-1213. PMID: 16582788
    • (2006) Plast Reconstr Surg , vol.117 , pp. 1206-1213
    • Wong, C.H.1    Song, C.2    Heng, K.S.3    Kee, I.H.4    Tien, S.L.5    Kumarasinghe, P.6
  • 25
    • 80052360838 scopus 로고    scopus 로고
    • Haemolysis during sample preparation alters microRNA content of plasma
    • PMID: 21909417
    • Kirschner MB, Kao SC, Edelman JJ, Armstrong NJ, Vallely MP, van Zandwijk N, et al. (2011) Haemolysis during sample preparation alters microRNA content of plasma. PLoS One 6: e24145. doi: 10.1371/journal.pone.0024145 PMID: 21909417
    • (2011) PLoS One , vol.6 , pp. e24145
    • Kirschner, M.B.1    Kao, S.C.2    Edelman, J.J.3    Armstrong, N.J.4    Vallely, M.P.5    Van Zandwijk, N.6
  • 26
    • 77649205818 scopus 로고    scopus 로고
    • Analysis of circulating microRNA biomarkers in plasma and serum using quantitative reverse transcription-PCR (qRT-PCR)
    • PMID: 20146939
    • Kroh EM, Parkin RK, Mitchell PS, Tewari M (2010) Analysis of circulating microRNA biomarkers in plasma and serum using quantitative reverse transcription-PCR (qRT-PCR). Methods 50: 298-301. doi: 10.1016/j.ymeth.2010.01.032 PMID: 20146939
    • (2010) Methods , vol.50 , pp. 298-301
    • Kroh, E.M.1    Parkin, R.K.2    Mitchell, P.S.3    Tewari, M.4
  • 27
    • 33847643776 scopus 로고    scopus 로고
    • Quantification of mRNA using real-time RT-PCR
    • PMID: 17406449
    • Nolan T, Hands RE, Bustin SA (2006) Quantification of mRNA using real-time RT-PCR. Nat Protoc 1: 1559-1582. PMID: 17406449
    • (2006) Nat Protoc , vol.1 , pp. 1559-1582
    • Nolan, T.1    Hands, R.E.2    Bustin, S.A.3
  • 28
    • 64149097786 scopus 로고    scopus 로고
    • The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments
    • PMID: 19246619
    • Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista M, et al. (2009) The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments. Clinical Chemistry 55: 611-622. doi: 10.1373/clinchem.2008.112797 PMID: 19246619
    • (2009) Clinical Chemistry , vol.55 , pp. 611-622
    • Bustin, S.A.1    Benes, V.2    Garson, J.A.3    Hellemans, J.4    Huggett, J.5    Kubista, M.6
  • 30
    • 80053946666 scopus 로고    scopus 로고
    • Circulating microRNAs: Association with disease and potential use as biomarkers
    • PMID: 21145252
    • Reid G, Kirschner MB, van Zandwijk N (2011) Circulating microRNAs: Association with disease and potential use as biomarkers. Crit Rev Oncol Hematol 80: 193-208. doi: 10.1016/j.critrevonc.2010.11.004 PMID: 21145252
    • (2011) Crit Rev Oncol Hematol , vol.80 , pp. 193-208
    • Reid, G.1    Kirschner, M.B.2    Van Zandwijk, N.3
  • 31
    • 78549270354 scopus 로고    scopus 로고
    • Circulating microRNAs are new and sensitive biomarkers of myocardial infarction
    • PMID: 20534597
    • D'Alessandra Y, Devanna P, Limana F, Straino S, Di Carlo A, Brambilla PG, et al. (2010) Circulating microRNAs are new and sensitive biomarkers of myocardial infarction. Eur Heart J 31: 2765-2773. doi: 10.1093/eurheartj/ehq167 PMID: 20534597
    • (2010) Eur Heart J , vol.31 , pp. 2765-2773
    • D'Alessandra, Y.1    Devanna, P.2    Limana, F.3    Straino, S.4    Di Carlo, A.5    Brambilla, P.G.6
  • 32
    • 53349177819 scopus 로고    scopus 로고
    • Characterization of microRNAs in serum: A novel class of biomarkers for diagnosis of cancer and other diseases
    • PMID: 18766170
    • Chen X, Ba Y, Ma L, Cai X, Yin Y, Wang K, et al. (2008) Characterization of microRNAs in serum: A novel class of biomarkers for diagnosis of cancer and other diseases. Cell Res 18: 997-1006. doi: 10.1038/cr.2008.282 PMID: 18766170
    • (2008) Cell Res , vol.18 , pp. 997-1006
    • Chen, X.1    Ba, Y.2    Ma, L.3    Cai, X.4    Yin, Y.5    Wang, K.6
  • 33
    • 67449100822 scopus 로고    scopus 로고
    • Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
    • PMID: 19170227
    • Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, et al. (2009) Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach. Mol Reprod Dev 76: 665.67748. doi: 10.1002/mrd.21005 PMID: 19170227
    • (2009) Mol Reprod Dev , vol.76
    • Tesfaye, D.1    Worku, D.2    Rings, F.3    Phatsara, C.4    Tholen, E.5    Schellander, K.6
  • 34
    • 77951245419 scopus 로고    scopus 로고
    • Characterization of microRNA expression in bovine adipose tissues: A potential regulatory mechanism of subcutaneous adipose tissue development
    • PMID: 20423511
    • Jin W, Dodson MV, Moore SS, Basarab JA, Guan LL (2010) Characterization of microRNA expression in bovine adipose tissues: a potential regulatory mechanism of subcutaneous adipose tissue development. BMC Mol Biol 11:29. doi: 10.1186/1471-2199-11-29 PMID: 20423511
    • (2010) BMC Mol Biol , vol.11 , pp. 29
    • Jin, W.1    Dodson, M.V.2    Moore, S.S.3    Basarab, J.A.4    Guan, L.L.5


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