-
2
-
-
33847091171
-
The role of two-component regulation systems in the physiology of the bacterial cell
-
Bekker M, Teixeira de Mattos MJ, Hellingwerf KJ, (2006) The role of two-component regulation systems in the physiology of the bacterial cell. Sci Prog 89: 213–242. 17338439
-
(2006)
Sci Prog
, vol.89
, pp. 213-242
-
-
Bekker, M.1
Teixeira de Mattos, M.J.2
Hellingwerf, K.J.3
-
3
-
-
77949917076
-
Evolution and phyletic distribution of two-component signal transduction systems
-
Wuichet K, Cantwell BJ, Zhulin IB, (2010) Evolution and phyletic distribution of two-component signal transduction systems. Curr Opin Microbiol 13: 219–225. doi: 10.1016/j.mib.2009.12.011 20133179
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 219-225
-
-
Wuichet, K.1
Cantwell, B.J.2
Zhulin, I.B.3
-
5
-
-
84929900948
-
-
Smith CS, Vicente JJ, Ryan KR, Gross R, Beier D, (2012) Cell cycle and developmental regulation by two-component signalling proteins in Caulobacter crescentus. In: Two-component systems in bacteria. Norfolk, UK: Caister Acad Press. pp. 269–291.
-
(2012)
Two-component systems in bacteria
, pp. 269-291
-
-
Smith, C.S.1
Vicente, J.J.2
Ryan, K.R.3
Gross, R.4
Beier, D.5
-
6
-
-
84926506193
-
-
Keilberg D, Huntley S, Sogaard-Andersen L, Gross R, Beier D, (2012) Two-component systems involoved in motility and development in Myxococcus xanthus. In: Two-component systems in bacteria. Norfolk, UK: Caister Acad. Press. pp. 293–314.
-
(2012)
Two-component systems in bacteria
, pp. 293-314
-
-
Keilberg, D.1
Huntley, S.2
Sogaard-Andersen, L.3
Gross, R.4
Beier, D.5
-
7
-
-
0033768412
-
Bacterial virulence gene regulation: an evolutionary perspective
-
Cotter PA, DiRita VJ, (2000) Bacterial virulence gene regulation: an evolutionary perspective. Annu Rev Microbiol 54: 519–565. 11018137
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 519-565
-
-
Cotter, P.A.1
DiRita, V.J.2
-
9
-
-
33846090559
-
MiST: a microbial signal transduction database
-
Ulrich LE, Zhulin IB, (2007) MiST: a microbial signal transduction database. Nucleic Acids Res 35: D386–390. 17135192
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 386-390
-
-
Ulrich, L.E.1
Zhulin, I.B.2
-
10
-
-
78651282059
-
P2CS: a database of prokaryotic two-component systems
-
Barakat M, Ortet P, Whitworth DE, (2011) P2CS: a database of prokaryotic two-component systems. Nucleic Acids Res 39: D771–776. doi: 10.1093/nar/gkq1023 21051349
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 771-776
-
-
Barakat, M.1
Ortet, P.2
Whitworth, D.E.3
-
11
-
-
78649658931
-
The mechanism of signal transduction by two-component systems
-
Casino P, Rubio V, Marina A, (2010) The mechanism of signal transduction by two-component systems. Curr Opin Struct Biol 20: 763–771. doi: 10.1016/j.sbi.2010.09.010 20951027
-
(2010)
Curr Opin Struct Biol
, vol.20
, pp. 763-771
-
-
Casino, P.1
Rubio, V.2
Marina, A.3
-
12
-
-
84896388487
-
Bordetella pertussis pathogenesis: current and future challenges
-
Melvin JA, Scheller EV, Miller JF, Cotter PA, (2014) Bordetella pertussis pathogenesis: current and future challenges. Nat Rev Microbiol 12: 274–288. doi: 10.1038/nrmicro3235 24608338
-
(2014)
Nat Rev Microbiol
, vol.12
, pp. 274-288
-
-
Melvin, J.A.1
Scheller, E.V.2
Miller, J.F.3
Cotter, P.A.4
-
13
-
-
0141907318
-
Phosphorelay control of virulence gene expression in Bordetella
-
Cotter PA, Jones AM, (2003) Phosphorelay control of virulence gene expression in Bordetella. Trends Microbiol 11: 367–373. 12915094
-
(2003)
Trends Microbiol
, vol.11
, pp. 367-373
-
-
Cotter, P.A.1
Jones, A.M.2
-
14
-
-
33644786313
-
Species- and strain-specific control of a complex, flexible regulon by Bordetella BvgAS
-
Cummings CA, Bootsma HJ, Relman DA, Miller JF, (2006) Species- and strain-specific control of a complex, flexible regulon by Bordetella BvgAS. J Bacteriol 188: 1775–1785. 16484188
-
(2006)
J Bacteriol
, vol.188
, pp. 1775-1785
-
-
Cummings, C.A.1
Bootsma, H.J.2
Relman, D.A.3
Miller, J.F.4
-
15
-
-
0035515224
-
Mechanisms of Bordetella pathogenesis
-
Mattoo S, Foreman-Wykert AK, Cotter PA, Miller JF, (2001) Mechanisms of Bordetella pathogenesis. Front Biosci 6: E168–186. 11689354
-
(2001)
Front Biosci
, vol.6
, pp. 168-186
-
-
Mattoo, S.1
Foreman-Wykert, A.K.2
Cotter, P.A.3
Miller, J.F.4
-
16
-
-
0027465009
-
Characterization of environmental regulators of Bordetella pertussis
-
Melton AR, Weiss AA, (1993) Characterization of environmental regulators of Bordetella pertussis. Infect Immun 61: 807–815. 8432601
-
(1993)
Infect Immun
, vol.61
, pp. 807-815
-
-
Melton, A.R.1
Weiss, A.A.2
-
17
-
-
84875589690
-
In vivo phosphorylation dynamics of the Bordetella pertussis virulence-controlling response regulator BvgA
-
Boulanger A, Chen Q, Hinton DM, Stibitz S, (2013) In vivo phosphorylation dynamics of the Bordetella pertussis virulence-controlling response regulator BvgA. Mol Microbiol 88: 156–172. doi: 10.1111/mmi.12177 23489959
-
(2013)
Mol Microbiol
, vol.88
, pp. 156-172
-
-
Boulanger, A.1
Chen, Q.2
Hinton, D.M.3
Stibitz, S.4
-
18
-
-
0023692408
-
Two trans-acting regulatory genes (vir and mod) control antigenic modulation in Bordetella pertussis
-
Knapp S, Mekalanos JJ, (1988) Two trans-acting regulatory genes (vir and mod) control antigenic modulation in Bordetella pertussis. J Bacteriol 170: 5059–5066. 2903140
-
(1988)
J Bacteriol
, vol.170
, pp. 5059-5066
-
-
Knapp, S.1
Mekalanos, J.J.2
-
19
-
-
0029128921
-
Identification of two bvg-repressed surface proteins of Bordetella pertussis
-
Stenson TH, Peppler MS, (1995) Identification of two bvg-repressed surface proteins of Bordetella pertussis. Infect Immun 63: 3780–3789. 7558280
-
(1995)
Infect Immun
, vol.63
, pp. 3780-3789
-
-
Stenson, T.H.1
Peppler, M.S.2
-
20
-
-
0030993684
-
A mutation in the Bordetella bronchiseptica bvgS gene results in reduced virulence and increased resistance to starvation, and identifies a new class of Bvg-regulated antigens
-
Cotter PA, Miller JF, (1997) A mutation in the Bordetella bronchiseptica bvgS gene results in reduced virulence and increased resistance to starvation, and identifies a new class of Bvg-regulated antigens. Mol Microbiol 24: 671–685. 9194696
-
(1997)
Mol Microbiol
, vol.24
, pp. 671-685
-
-
Cotter, P.A.1
Miller, J.F.2
-
21
-
-
0035185211
-
Identification and characterization of BipA, a Bordetella Bvg-intermediate phase protein
-
Stockbauer KE, Fuchslocher B, Miller JF, Cotter PA, (2001) Identification and characterization of BipA, a Bordetella Bvg-intermediate phase protein. Mol Microbiol 39: 65–78. 11123689
-
(2001)
Mol Microbiol
, vol.39
, pp. 65-78
-
-
Stockbauer, K.E.1
Fuchslocher, B.2
Miller, J.F.3
Cotter, P.A.4
-
22
-
-
0034704982
-
Dimerization of signalling modules of the EvgAS and BvgAS phosphorelay systems
-
Perraud AL, Rippe K, Bantscheff M, Glocker M, Lucassen M, et al. (2000) Dimerization of signalling modules of the EvgAS and BvgAS phosphorelay systems. Biochim Biophys Acta 1478: 341–354. 10825546
-
(2000)
Biochim Biophys Acta
, vol.1478
, pp. 341-354
-
-
Perraud, A.L.1
Rippe, K.2
Bantscheff, M.3
Glocker, M.4
Lucassen, M.5
-
23
-
-
84880888826
-
Characterization of the PAS domain in the sensor-kinase BvgS: mechanical role in signal transmission
-
Dupre E, Wohlkonig A, Herrou J, Locht C, Jacob-Dubuisson F, et al. (2013) Characterization of the PAS domain in the sensor-kinase BvgS: mechanical role in signal transmission. BMC Microbiol 13: 172. doi: 10.1186/1471-2180-13-172 23883404
-
(2013)
BMC Microbiol
, vol.13
, pp. 172
-
-
Dupre, E.1
Wohlkonig, A.2
Herrou, J.3
Locht, C.4
Jacob-Dubuisson, F.5
-
24
-
-
84881053099
-
-
Jacob-Dubuisson F, Wintjens R, Herrou J, Dupré E, Antoine R, Gross R, Beier D, (2012) BvgS of pathogenic Bordetellae: a paradigm for sensor kinase with Venus Flytrap perception domains. In: Two-component system in bacteria. Norfolk, UK: Caister Academic Press. pp. 57–83.
-
(2012)
Two-component system in bacteria
, pp. 57-83
-
-
Jacob-Dubuisson, F.1
Wintjens, R.2
Herrou, J.3
Dupré, E.4
Antoine, R.5
Gross, R.6
Beier, D.7
-
25
-
-
0029981539
-
Atomic structure and specificity of bacterial periplasmic receptors for active transport and chemotaxis: variation of common themes
-
Quiocho FA, Ledvina PS, (1996) Atomic structure and specificity of bacterial periplasmic receptors for active transport and chemotaxis: variation of common themes. Mol Microbiol 20: 17–25. 8861200
-
(1996)
Mol Microbiol
, vol.20
, pp. 17-25
-
-
Quiocho, F.A.1
Ledvina, P.S.2
-
26
-
-
17844398488
-
Ligand-free and-bound structures of the binding protein (LivJ) of the Escherichia coli ABC leucine/isoleucine/valine transport system: trajectory and dynamics of the interdomain rotation and ligand specificity
-
Trakhanov S, Vyas NK, Luecke H, Kristensen DM, Ma J, et al. (2005) Ligand-free and-bound structures of the binding protein (LivJ) of the Escherichia coli ABC leucine/isoleucine/valine transport system: trajectory and dynamics of the interdomain rotation and ligand specificity. Biochemistry 44: 6597–6608. 15850393
-
(2005)
Biochemistry
, vol.44
, pp. 6597-6608
-
-
Trakhanov, S.1
Vyas, N.K.2
Luecke, H.3
Kristensen, D.M.4
Ma, J.5
-
27
-
-
78049264794
-
Periplasmic domain of the sensor-kinase BvgS reveals a new paradigm for the Venus flytrap mechanism
-
Herrou J, Bompard C, Wintjens R, Dupre E, Willery E, et al. (2010) Periplasmic domain of the sensor-kinase BvgS reveals a new paradigm for the Venus flytrap mechanism. Proc Natl Acad Sci USA 107: 17351–17355. doi: 10.1073/pnas.1006267107 20855615
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 17351-17355
-
-
Herrou, J.1
Bompard, C.2
Wintjens, R.3
Dupre, E.4
Willery, E.5
-
28
-
-
0036843687
-
Escherichia coli gene expression responsive to levels of the response regulator EvgA
-
Masuda N, Church GM, (2002) Escherichia coli gene expression responsive to levels of the response regulator EvgA. J Bacteriol 184: 6225–6234. 12399493
-
(2002)
J Bacteriol
, vol.184
, pp. 6225-6234
-
-
Masuda, N.1
Church, G.M.2
-
29
-
-
79951811566
-
Two-component regulatory systems in Pseudomonas aeruginosa: an intricate network mediating fimbrial and efflux pump gene expression
-
Sivaneson M, Mikkelsen H, Ventre I, Bordi C, Filloux A, (2011) Two-component regulatory systems in Pseudomonas aeruginosa: an intricate network mediating fimbrial and efflux pump gene expression. Mol Microbiol 79: 1353–1366. doi: 10.1111/j.1365-2958.2010.07527.x 21205015
-
(2011)
Mol Microbiol
, vol.79
, pp. 1353-1366
-
-
Sivaneson, M.1
Mikkelsen, H.2
Ventre, I.3
Bordi, C.4
Filloux, A.5
-
30
-
-
52649135568
-
The Vibrio cholerae hybrid sensor kinase VieS contributes to motility and biofilm regulation by altering the cyclic diguanylate level
-
Martinez-Wilson HF, Tamayo R, Tischler AD, Lazinski DW, Camilli A, (2008) The Vibrio cholerae hybrid sensor kinase VieS contributes to motility and biofilm regulation by altering the cyclic diguanylate level. J Bacteriol 190: 6439–6447. doi: 10.1128/JB.00541-08 18676667
-
(2008)
J Bacteriol
, vol.190
, pp. 6439-6447
-
-
Martinez-Wilson, H.F.1
Tamayo, R.2
Tischler, A.D.3
Lazinski, D.W.4
Camilli, A.5
-
31
-
-
3042558475
-
Regulation of the Ysa of the type III secretion system of Yersinia enterocolitica by YsaE/SycB and YsrS/YsrR
-
Walker KA, Miller VL, (2004) Regulation of the Ysa of the type III secretion system of Yersinia enterocolitica by YsaE/SycB and YsrS/YsrR. J Bacteriol 186: 4056–4066. 15205407
-
(2004)
J Bacteriol
, vol.186
, pp. 4056-4066
-
-
Walker, K.A.1
Miller, V.L.2
-
32
-
-
79960955642
-
The hybrid histidine kinase Hk1 is part of a two-component system that is essential for survival of Borrelia burgdorferi in feeding Ixodes scapularis ticks
-
Caimano MJ, Kenedy MR, Kairu T, Desrosiers DC, Harman M, et al. (2011) The hybrid histidine kinase Hk1 is part of a two-component system that is essential for survival of Borrelia burgdorferi in feeding Ixodes scapularis ticks. Infect Immun 79: 3117–3130. doi: 10.1128/IAI.05136-11 21606185
-
(2011)
Infect Immun
, vol.79
, pp. 3117-3130
-
-
Caimano, M.J.1
Kenedy, M.R.2
Kairu, T.3
Desrosiers, D.C.4
Harman, M.5
-
33
-
-
52049119300
-
Constitutive activation of the N-methyl-D-aspartate receptor via cleft-spanning disulfide bonds
-
Blanke ML, VanDongen AM, (2008) Constitutive activation of the N-methyl-D-aspartate receptor via cleft-spanning disulfide bonds. J Biol Chem 283: 21519–21529. doi: 10.1074/jbc.M709190200 18450751
-
(2008)
J Biol Chem
, vol.283
, pp. 21519-21529
-
-
Blanke, M.L.1
VanDongen, A.M.2
-
34
-
-
84876183319
-
Allosteric signaling and dynamics of the clamshell-like NMDA receptor GluN1 N-terminal domain
-
Zhu S, Stroebel D, Yao CA, Taly A, Paoletti P, (2013) Allosteric signaling and dynamics of the clamshell-like NMDA receptor GluN1 N-terminal domain. Nat Struct Mol Biol 20: 477–485. doi: 10.1038/nsmb.2522 23454977
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 477-485
-
-
Zhu, S.1
Stroebel, D.2
Yao, C.A.3
Taly, A.4
Paoletti, P.5
-
35
-
-
70349227323
-
Molecular evolution of the two-component system BvgAS involved in virulence regulation in Bordetella
-
Herrou J, Debrie AS, Willery E, Renaud-Mongenie G, Locht C, et al. (2009) Molecular evolution of the two-component system BvgAS involved in virulence regulation in Bordetella. PLoS One 4: e6996. doi: 10.1371/journal.pone.0006996 19750014
-
(2009)
PLoS One
, vol.4
, pp. 6996
-
-
Herrou, J.1
Debrie, A.S.2
Willery, E.3
Renaud-Mongenie, G.4
Locht, C.5
-
36
-
-
0029904958
-
Conserved sequence motifs in the unorthodox BvgS two-component sensor protein of Bordetella pertussis
-
Beier D, Deppisch H, Gross R, (1996) Conserved sequence motifs in the unorthodox BvgS two-component sensor protein of Bordetella pertussis. Mol Gen Genet 252: 169–176. 8804390
-
(1996)
Mol Gen Genet
, vol.252
, pp. 169-176
-
-
Beier, D.1
Deppisch, H.2
Gross, R.3
-
37
-
-
0029871035
-
Integration of multiple domains in a two-component sensor protein: the Bordetella pertussis BvgAS phosphorelay
-
Uhl MA, Miller JF, (1996) Integration of multiple domains in a two-component sensor protein: the Bordetella pertussis BvgAS phosphorelay. Embo J 15: 1028–1036. 8605872
-
(1996)
Embo J
, vol.15
, pp. 1028-1036
-
-
Uhl, M.A.1
Miller, J.F.2
-
38
-
-
0343996104
-
Sequences required for expression of Bordetella pertussis virulence factors share homology with prokaryotic signal transduction proteins
-
Arico B, Miller JF, Roy C, Stibitz S, Monack D, et al. (1989) Sequences required for expression of Bordetella pertussis virulence factors share homology with prokaryotic signal transduction proteins. Proc Natl Acad Sci USA 86: 6671–6675. 2549542
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 6671-6675
-
-
Arico, B.1
Miller, J.F.2
Roy, C.3
Stibitz, S.4
Monack, D.5
-
39
-
-
77949916499
-
Two-component signal transduction as potential drug targets in pathogenic bacteria
-
Gotoh Y, Eguchi Y, Watanabe T, Okamoto S, Doi A, et al. (2010) Two-component signal transduction as potential drug targets in pathogenic bacteria. Curr Opin Microbiol 13: 232–239. doi: 10.1016/j.mib.2010.01.008 20138000
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 232-239
-
-
Gotoh, Y.1
Eguchi, Y.2
Watanabe, T.3
Okamoto, S.4
Doi, A.5
-
40
-
-
64849111005
-
Sending signals dynamically
-
Smock RG, Gierasch LM, (2009) Sending signals dynamically. Science 324: 198–203. doi: 10.1126/science.1169377 19359576
-
(2009)
Science
, vol.324
, pp. 198-203
-
-
Smock, R.G.1
Gierasch, L.M.2
-
41
-
-
34547820278
-
Integration of rotation and piston motions in coiled-coil signal transduction
-
Gao R, Lynn DG, (2007) Integration of rotation and piston motions in coiled-coil signal transduction. J Bacteriol 189: 6048–6056. 17573470
-
(2007)
J Bacteriol
, vol.189
, pp. 6048-6056
-
-
Gao, R.1
Lynn, D.G.2
-
42
-
-
84860810089
-
A scissor blade-like closing mechanism implicated in transmembrane signaling in a Bacteroides hybrid two-component system
-
Lowe EC, Basle A, Czjzek M, Firbank SJ, Bolam DN, (2012) A scissor blade-like closing mechanism implicated in transmembrane signaling in a Bacteroides hybrid two-component system. Proc Natl Acad Sci U S A 109: 7298–7303. doi: 10.1073/pnas.1200479109 22532667
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 7298-7303
-
-
Lowe, E.C.1
Basle, A.2
Czjzek, M.3
Firbank, S.J.4
Bolam, D.N.5
-
43
-
-
84874714706
-
HAMP Domain Conformers That Propagate Opposite Signals in Bacterial Chemoreceptors
-
e1001479
-
Airola MV, Sukomon N, Samanta D, Borbat PP, Freed JH, et al. (2013) HAMP Domain Conformers That Propagate Opposite Signals in Bacterial Chemoreceptors. PLoS Biol 11: e1001479. doi: 10.1371/journal.pbio.1001479 23424282
-
(2013)
PLoS Biol
, vol.11
-
-
Airola, M.V.1
Sukomon, N.2
Samanta, D.3
Borbat, P.P.4
Freed, J.H.5
-
44
-
-
84900432315
-
Mechanism of activation of protein kinase JAK2 by the growth hormone receptor
-
Brooks AJ, Dai W, O’Mara ML, Abankwa D, Chhabra Y, et al. (2014) Mechanism of activation of protein kinase JAK2 by the growth hormone receptor. Science 344: 1249783. doi: 10.1126/science.1249783 24833397
-
(2014)
Science
, vol.344
, pp. 1249783
-
-
Brooks, A.J.1
Dai, W.2
O’Mara, M.L.3
Abankwa, D.4
Chhabra, Y.5
-
45
-
-
70349333363
-
Crystal structure of a histidine kinase sensor domain with similarity to periplasmic binding proteins
-
Cheung J, Le-Khac M, Hendrickson WA, (2009) Crystal structure of a histidine kinase sensor domain with similarity to periplasmic binding proteins. Proteins 77: 235–241. doi: 10.1002/prot.22485 19544572
-
(2009)
Proteins
, vol.77
, pp. 235-241
-
-
Cheung, J.1
Le-Khac, M.2
Hendrickson, W.A.3
-
46
-
-
0001207803
-
Antigenic modulation of Bordetella pertussis
-
Lacey BW, (1960) Antigenic modulation of Bordetella pertussis. J Hyg 31: 423–434.
-
(1960)
J Hyg
, vol.31
, pp. 423-434
-
-
Lacey, B.W.1
-
47
-
-
19444371985
-
A new paradigm for hormone recognition and allosteric receptor activation revealed from structural studies of NPR-C
-
He XL, Dukkipati A, Wang X, Garcia KC, (2005) A new paradigm for hormone recognition and allosteric receptor activation revealed from structural studies of NPR-C. Peptides 26: 1035–1043. 15911071
-
(2005)
Peptides
, vol.26
, pp. 1035-1043
-
-
He, X.L.1
Dukkipati, A.2
Wang, X.3
Garcia, K.C.4
-
48
-
-
79961020657
-
Molecular basis of positive allosteric modulation of GluN2B NMDA receptors by polyamines
-
Mony L, Zhu S, Carvalho S, Paoletti P, (2011) Molecular basis of positive allosteric modulation of GluN2B NMDA receptors by polyamines. EMBO J 30: 3134–3146. doi: 10.1038/emboj.2011.203 21685875
-
(2011)
EMBO J
, vol.30
, pp. 3134-3146
-
-
Mony, L.1
Zhu, S.2
Carvalho, S.3
Paoletti, P.4
-
49
-
-
84901640125
-
Crystal structure of a heterotetrameric NMDA receptor ion channel
-
Karakas E, Furukawa H, (2014) Crystal structure of a heterotetrameric NMDA receptor ion channel. Science 344: 992–997. doi: 10.1126/science.1251915 24876489
-
(2014)
Science
, vol.344
, pp. 992-997
-
-
Karakas, E.1
Furukawa, H.2
-
50
-
-
72049124287
-
X-ray structure, symmetry and mechanism of an AMPA-subtype glutamate receptor
-
Sobolevsky AI, Rosconi MP, Gouaux E, (2009) X-ray structure, symmetry and mechanism of an AMPA-subtype glutamate receptor. Nature 462: 745–756. doi: 10.1038/nature08624 19946266
-
(2009)
Nature
, vol.462
, pp. 745-756
-
-
Sobolevsky, A.I.1
Rosconi, M.P.2
Gouaux, E.3
-
51
-
-
84906940625
-
Characterization of mutations in the PAS domain of the EvgS sensor kinase selected by laboratory evolution for acid resistance in Escherichia coli
-
Johnson MD, Bell J, Clarke K, Chandler R, Pathak P, et al. (2014) Characterization of mutations in the PAS domain of the EvgS sensor kinase selected by laboratory evolution for acid resistance in Escherichia coli. Mol Microbiol 93: 911–927. doi: 10.1111/mmi.12704 24995530
-
(2014)
Mol Microbiol
, vol.93
, pp. 911-927
-
-
Johnson, M.D.1
Bell, J.2
Clarke, K.3
Chandler, R.4
Pathak, P.5
-
52
-
-
0030691041
-
Design of an expression system for detecting folded protein domains and mapping macromolecular interactions by NMR
-
Huth JR, Bewley CA, Jackson BM, Hinnebusch AG, Clore GM, et al. (1997) Design of an expression system for detecting folded protein domains and mapping macromolecular interactions by NMR. Protein Sci 6: 2359–2364. 9385638
-
(1997)
Protein Sci
, vol.6
, pp. 2359-2364
-
-
Huth, J.R.1
Bewley, C.A.2
Jackson, B.M.3
Hinnebusch, A.G.4
Clore, G.M.5
-
55
-
-
79953763877
-
REFMAC5 for the refinement of macromolecular crystal structures
-
Murshudov GN, Skubak P, Lebedev AA, Pannu NS, Steiner RA, et al. (2011) REFMAC5 for the refinement of macromolecular crystal structures. Acta Crystallogr D Biol Crystallogr 67: 355–367. doi: 10.1107/S0907444911001314 21460454
-
(2011)
Acta Crystallogr D Biol Crystallogr
, vol.67
, pp. 355-367
-
-
Murshudov, G.N.1
Skubak, P.2
Lebedev, A.A.3
Pannu, N.S.4
Steiner, R.A.5
-
56
-
-
0035788131
-
Spherically averaged phased translation function and its application to the search for molecules and fragments in electron-density maps
-
Vagin AA, Isupov MN, (2001) Spherically averaged phased translation function and its application to the search for molecules and fragments in electron-density maps. Acta Crystallogr D Biol Crystallogr 57: 1451–1456. 11567159
-
(2001)
Acta Crystallogr D Biol Crystallogr
, vol.57
, pp. 1451-1456
-
-
Vagin, A.A.1
Isupov, M.N.2
-
57
-
-
77949535720
-
Features and development of Coot
-
Emsley P, Lohkamp B, Scott WG, Cowtan K, (2010) Features and development of Coot. Acta Crystallogr D Biol Crystallogr 66: 486–501. doi: 10.1107/S0907444910007493 20383002
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
58
-
-
84860273177
-
Towards automated crystallographic structure refinement with phenix.refine
-
Afonine PV, Grosse-Kunstleve RW, Echols N, Headd JJ, Moriarty NW, et al. (2012) Towards automated crystallographic structure refinement with phenix.refine. Acta Crystallogr D Biol Crystallogr 68: 352–367. doi: 10.1107/S0907444912001308 22505256
-
(2012)
Acta Crystallogr D Biol Crystallogr
, vol.68
, pp. 352-367
-
-
Afonine, P.V.1
Grosse-Kunstleve, R.W.2
Echols, N.3
Headd, J.J.4
Moriarty, N.W.5
-
59
-
-
80052470285
-
Automated real-space refinement of protein structures using a realistic backbone move set
-
Haddadian EJ, Gong H, Jha AK, Yang X, Debartolo J, et al. (2011) Automated real-space refinement of protein structures using a realistic backbone move set. Biophys J 101: 899–909. doi: 10.1016/j.bpj.2011.06.063 21843481
-
(2011)
Biophys J
, vol.101
, pp. 899-909
-
-
Haddadian, E.J.1
Gong, H.2
Jha, A.K.3
Yang, X.4
Debartolo, J.5
-
60
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel E, Henrick K, (2007) Inference of macromolecular assemblies from crystalline state. J Mol Biol 372: 774–797. 17681537
-
(2007)
J Mol Biol
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
61
-
-
84926447966
-
-
Eswar N, Marti-Renom MA, Webb B, Madhusudhan MS, Eramwan D, et al. (2006) Comparative protein structure modelling with Modeler. In: John Wiley and sons I, editor. Current protocols in Bioinformatics. pp. 1–30.
-
(2006)
, pp. 1-30
-
-
Eswar, N.1
Marti-Renom, M.A.2
Webb, B.3
Madhusudhan, M.S.4
Eramwan, D.5
-
62
-
-
0141506109
-
Disulfide by Design: a computational method for the rational design of disulfide bonds in proteins
-
Dombkowski AA, (2003) Disulfide by Design: a computational method for the rational design of disulfide bonds in proteins. Bioinformatics 19: 1852–1853. 14512360
-
(2003)
Bioinformatics
, vol.19
, pp. 1852-1853
-
-
Dombkowski, A.A.1
-
63
-
-
0033818865
-
New virulence-activated and virulence-repressed genes identified by systematic gene inactivation and generation of transcriptional fusions in Bordetella pertussis
-
Antoine R, Alonso S, Raze D, Coutte L, Lesjean S, et al. (2000) New virulence-activated and virulence-repressed genes identified by systematic gene inactivation and generation of transcriptional fusions in Bordetella pertussis. J Bacteriol 182: 5902–5905. 11004193
-
(2000)
J Bacteriol
, vol.182
, pp. 5902-5905
-
-
Antoine, R.1
Alonso, S.2
Raze, D.3
Coutte, L.4
Lesjean, S.5
-
64
-
-
0020505228
-
Heptakis (2,6-O-dimethyl)beta-cyclodextrin: a novel growth stimulant for Bordetella pertussis phase I
-
Imaizumi A, Suzuki Y, Ono S, Sato Y, Sato H, (1983) Heptakis (2,6-O-dimethyl)beta-cyclodextrin: a novel growth stimulant for Bordetella pertussis phase I. J Clin Microbiol 17: 781–786. 6306047
-
(1983)
J Clin Microbiol
, vol.17
, pp. 781-786
-
-
Imaizumi, A.1
Suzuki, Y.2
Ono, S.3
Sato, Y.4
Sato, H.5
-
65
-
-
0028793123
-
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes
-
Kovach ME, Elzer PH, Hill DS, Robertson GT, Farris MA, et al. (1995) Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettes. Gene 166: 175–176. 8529885
-
(1995)
Gene
, vol.166
, pp. 175-176
-
-
Kovach, M.E.1
Elzer, P.H.2
Hill, D.S.3
Robertson, G.T.4
Farris, M.A.5
|