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Volumn 2, Issue , 2015, Pages

Using CellML with OpenCMISS to Simulate Multi-Scale Physiology

Author keywords

CellML; multi scale physiological model; OpenCMISS; physiome project; virtual physiological human

Indexed keywords

BOUNDARY CONDITIONS; ELECTROPHYSIOLOGY; FIELD PROGRAMMABLE GATE ARRAYS (FPGA); GRAPHICS PROCESSING UNIT; LINEAR ALGEBRA; LINEAR EQUATIONS; OPEN SOURCE SOFTWARE; ORDINARY DIFFERENTIAL EQUATIONS; PHYSIOLOGICAL MODELS;

EID: 84926466353     PISSN: None     EISSN: 22964185     Source Type: Journal    
DOI: 10.3389/fbioe.2014.00079     Document Type: Article
Times cited : (22)

References (20)
  • 2
    • 80053164085 scopus 로고    scopus 로고
    • OpenCMISS: a multi-physics & multi-scale computational infrastructure for the VPH/physiome project
    • 21762717
    • Bradley C. Bowery A. Britten R. Budelmann V. Camara O. Christie R. et al. (2011). OpenCMISS: a multi-physics & multi-scale computational infrastructure for the VPH/physiome project. Prog. Biophys. Mol. Biol. 107, 32–47.10.1016/j.pbiomolbio.2011.06.01521762717
    • (2011) Prog. Biophys. Mol. Biol , vol.107 , pp. 32-47
    • Bradley, C.1    Bowery, A.2    Britten, R.3    Budelmann, V.4    Camara, O.5    Christie, R.6
  • 3
    • 84896691944 scopus 로고    scopus 로고
    • FieldML, a proposed open standard for the physiome project for mathematical model representation
    • 23900627
    • Britten R. D. Christie G. R. Little C. Miller A. K. Bradley C. Wu A. et al. (2013). FieldML, a proposed open standard for the physiome project for mathematical model representation. Med. Biol. Eng. Comput. 51, 1191–1207.10.1007/s11517-013-1097-723900627
    • (2013) Med. Biol. Eng. Comput , vol.51 , pp. 1191-1207
    • Britten, R.D.1    Christie, G.R.2    Little, C.3    Miller, A.K.4    Bradley, C.5    Wu, A.6
  • 6
    • 77951969603 scopus 로고    scopus 로고
    • Standard virtual biological parts: a repository of modular modeling components for synthetic biology
    • 20160009
    • Cooling M. T. Rouilly V. Misirli G. Lawson J. Yu T. Hallinan J. et al. (2010). Standard virtual biological parts: a repository of modular modeling components for synthetic biology. Bioinformatics 26, 925–931.10.1093/bioinformatics/btq06320160009
    • (2010) Bioinformatics , vol.26 , pp. 925-931
    • Cooling, M.T.1    Rouilly, V.2    Misirli, G.3    Lawson, J.4    Yu, T.5    Hallinan, J.6
  • 7
    • 80053605881 scopus 로고    scopus 로고
    • High-throughput functional curation of cellular electrophysiology models
    • 21704062
    • Cooper J. Mirams G. R. Niederer S. A. (2011). High-throughput functional curation of cellular electrophysiology models. Prog. Biophys. Mol. Biol. 107, 11–20.10.1016/j.pbiomolbio.2011.06.00321704062
    • (2011) Prog. Biophys. Mol. Biol , vol.107 , pp. 11-20
    • Cooper, J.1    Mirams, G.R.2    Niederer, S.A.3
  • 10
    • 2442598065 scopus 로고    scopus 로고
    • The IUPS physiome project: a framework for computational physiology
    • 15142761
    • Hunter P. J. (2004). The IUPS physiome project: a framework for computational physiology. Prog. Biophys. Mol. Biol. 85, 551–569.10.1016/j.pbiomolbio.2004.02.00615142761
    • (2004) Prog. Biophys. Mol. Biol , vol.85 , pp. 551-569
    • Hunter, P.J.1
  • 13
    • 50049131641 scopus 로고    scopus 로고
    • Practical application of CellML 1.1: the integration of new mechanisms into a human ventricular myocyte model
    • 18606438
    • Nickerson D. Buist M. (2008). Practical application of CellML 1.1: the integration of new mechanisms into a human ventricular myocyte model. Prog. Biophys. Mol. Biol. 98, 38–51.10.1016/j.pbiomolbio.2008.05.00618606438
    • (2008) Prog. Biophys. Mol. Biol , vol.98 , pp. 38-51
    • Nickerson, D.1    Buist, M.2
  • 14
    • 33751348074 scopus 로고    scopus 로고
    • Computational multiscale modeling in the IUPS physiome project: modeling cardiac electromechanics
    • Nickerson D. Nash M. Nielsen P. Smith N. Hunter P. (2006). Computational multiscale modeling in the IUPS physiome project: modeling cardiac electromechanics. IBM J. Res. Dev. 50, 617–630.10.1147/rd.506.0617
    • (2006) IBM J. Res. Dev , vol.50 , pp. 617-630
    • Nickerson, D.1    Nash, M.2    Nielsen, P.3    Smith, N.4    Hunter, P.5
  • 15
    • 0031917543 scopus 로고    scopus 로고
    • Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes
    • 9487284
    • Noble D. Varghese A. Kohl P. Noble P. (1998). Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes. Can. J. Cardiol. 14, 123–134.9487284
    • (1998) Can. J. Cardiol , vol.14 , pp. 123-134
    • Noble, D.1    Varghese, A.2    Kohl, P.3    Noble, P.4
  • 16
    • 0032845277 scopus 로고    scopus 로고
    • An advanced algorithm for solving partial differential equation in cardiac conduction
    • 10493080
    • Qu Z. Garfinkel A. (1999). An advanced algorithm for solving partial differential equation in cardiac conduction. IEEE Trans. Biomed. Eng. 46, 1166–1168.10.1109/10.78414910493080
    • (1999) IEEE Trans. Biomed. Eng , vol.46 , pp. 1166-1168
    • Qu, Z.1    Garfinkel, A.2
  • 17
    • 0000298337 scopus 로고
    • Large elastic deformations of isotropic materials. VII. Experiments on the deformation of rubber
    • 19627833
    • Rivlin R. S. Saunders D. W. (1951). Large elastic deformations of isotropic materials. VII. Experiments on the deformation of rubber. Philos. Trans. A Math. Phys. Eng. Sci. 243, 251–288.10.1016/j.jmbbm.2008.10.00719627833
    • (1951) Philos. Trans. A Math. Phys. Eng. Sci , vol.243 , pp. 251-288
    • Rivlin, R.S.1    Saunders, D.W.2
  • 18
    • 17844407146 scopus 로고    scopus 로고
    • An operator splitting method for solving the bidomain equations coupled to a volume conductor model for the torso
    • 15854678
    • Sundnes J. Lines G. T. Tveito A. (2005). An operator splitting method for solving the bidomain equations coupled to a volume conductor model for the torso. Math. Biosci. 194, 233–248.10.1016/j.mbs.2005.01.00115854678
    • (2005) Math. Biosci , vol.194 , pp. 233-248
    • Sundnes, J.1    Lines, G.T.2    Tveito, A.3
  • 19
    • 83455162737 scopus 로고    scopus 로고
    • Reproducible computational biology experiments with SED-ML–the simulation experiment description markup language
    • 22172142
    • Waltemath D. Adams R. Bergmann F. T. Hucka M. Kolpakov F. Miller A. K. et al. (2011). Reproducible computational biology experiments with SED-ML–the simulation experiment description markup language. BMC Syst. Biol. 5:198.10.1186/1752-0509-5-19822172142
    • (2011) BMC Syst. Biol , vol.5 , pp. 198
    • Waltemath, D.1    Adams, R.2    Bergmann, F.T.3    Hucka, M.4    Kolpakov, F.5    Miller, A.K.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.