-
1
-
-
77952891391
-
Rhamnolipids: diversity of structures, microbial origins and roles
-
Abdel-Mawgoud, A. M., F. Lepine, and E. Deziel. 2010. Rhamnolipids: diversity of structures, microbial origins and roles. Appl. Microbiol. Biotechnol. 86:1323-1336.
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.86
, pp. 1323-1336
-
-
Abdel-Mawgoud, A.M.1
Lepine, F.2
Deziel, E.3
-
2
-
-
84873692809
-
Microbial consortia in oman oil fields: a possible use in enhanced oil recovery
-
Al-Bahry, S. N., A. E. Elshafie, Y. M. Al-Wahaibi, A. S. Al-Bemani, S. J. Joshi, R. A. Al-Maaini, et al. 2013. Microbial consortia in oman oil fields: a possible use in enhanced oil recovery. J. Microbiol. Biotechnol. 23:106-117.
-
(2013)
J. Microbiol. Biotechnol.
, vol.23
, pp. 106-117
-
-
Al-Bahry, S.N.1
Elshafie, A.E.2
Al-Wahaibi, Y.M.3
Al-Bemani, A.S.4
Joshi, S.J.5
Al-Maaini, R.A.6
-
3
-
-
0002638220
-
The presence of sulphate reducing bacteria in oil field waters
-
Bastin, E. S., F. E. Greer, C. A. Merritt, and G. Moulton. 1926. The presence of sulphate reducing bacteria in oil field waters. Science 63:21-24.
-
(1926)
Science
, vol.63
, pp. 21-24
-
-
Bastin, E.S.1
Greer, F.E.2
Merritt, C.A.3
Moulton, G.4
-
4
-
-
55949120111
-
The effect of long-term nitrate treatment on SRB activity, corrosion rate and bacterial community composition in offshore water injection systems
-
Bodtker, G., T. Thorstenson, B. L. Lillebo, B. E. Thorbjornsen, R. H. Ulvoen, E. Sunde, et al. 2008. The effect of long-term nitrate treatment on SRB activity, corrosion rate and bacterial community composition in offshore water injection systems. J. Ind. Microbiol. Biotechnol. 35:1625-1636.
-
(2008)
J. Ind. Microbiol. Biotechnol.
, vol.35
, pp. 1625-1636
-
-
Bodtker, G.1
Thorstenson, T.2
Lillebo, B.L.3
Thorbjornsen, B.E.4
Ulvoen, R.H.5
Sunde, E.6
-
5
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J. G., J. Kuczynski, J. Stombaugh, K. Bittinger, F. D. Bushman, E. K. Costello, et al. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7:335-336.
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
6
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
Caporaso, J. G., C. L. Lauber, W. A. Walters, D. Berg-Lyons, C. A. Lozupone, P. J. Turnbaugh, et al. 2011. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc. Natl Acad. Sci. USA 108(Suppl 1):4516-4522.
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Lozupone, C.A.5
Turnbaugh, P.J.6
-
7
-
-
58149200948
-
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
-
Cole, J. R., Q. Wang, E. Cardenas, J. Fish, B. Chai, R. J. Farris, et al. 2009. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 37:D141-D145.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D141-D145
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
Chai, B.5
Farris, R.J.6
-
8
-
-
84884904719
-
UPARSE: highly accurate OTU sequences from microbial amplicon reads
-
Edgar, R. C. 2013. UPARSE: highly accurate OTU sequences from microbial amplicon reads. Nat. Methods 10:996-998.
-
(2013)
Nat. Methods
, vol.10
, pp. 996-998
-
-
Edgar, R.C.1
-
9
-
-
80053224983
-
Nitrate-reducing community in production water of three oil reservoirs and their responses to different carbon sources revealed by nitrate-reductase encoding gene (napA)
-
Feng, W. W., J. F. Liu, J. D. Gu, and B. Z. Mu. 2011. Nitrate-reducing community in production water of three oil reservoirs and their responses to different carbon sources revealed by nitrate-reductase encoding gene (napA). Int. Biodeterior. Biodegradation 65:1081-1086.
-
(2011)
Int. Biodeterior. Biodegradation
, vol.65
, pp. 1081-1086
-
-
Feng, W.W.1
Liu, J.F.2
Gu, J.D.3
Mu, B.Z.4
-
10
-
-
84892364585
-
Dynamic processes of indigenous microorganisms from a low-temperature petroleum reservoir during nutrient stimulation
-
Gao, P. K., G. Q. Li, L. X. Zhao, X. C. Dai, H. M. Tian, L. B. Dai, et al. 2014. Dynamic processes of indigenous microorganisms from a low-temperature petroleum reservoir during nutrient stimulation. J. Biosci. Bioeng. 117:215-221.
-
(2014)
J. Biosci. Bioeng.
, vol.117
, pp. 215-221
-
-
Gao, P.K.1
Li, G.Q.2
Zhao, L.X.3
Dai, X.C.4
Tian, H.M.5
Dai, L.B.6
-
11
-
-
33745282399
-
DsrB gene-based DGGE for community and diversity surveys of sulfate-reducing bacteria
-
Geets, J., B. Borrernans, L. Diels, D. Springael, J. Vangronsveld, D. van der Lelie, et al. 2006. DsrB gene-based DGGE for community and diversity surveys of sulfate-reducing bacteria. J. Microbiol. Methods 66:194-205.
-
(2006)
J. Microbiol. Methods
, vol.66
, pp. 194-205
-
-
Geets, J.1
Borrernans, B.2
Diels, L.3
Springael, D.4
Vangronsveld, J.5
van der Lelie, D.6
-
12
-
-
0037439040
-
Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant
-
Harms, G., A. C. Layton, H. M. Dionisi, I. R. Gregory, V. M. Garrett, S. A. Hawkins, et al. 2003. Real-time PCR quantification of nitrifying bacteria in a municipal wastewater treatment plant. Environ. Sci. Technol. 37:343-351.
-
(2003)
Environ. Sci. Technol.
, vol.37
, pp. 343-351
-
-
Harms, G.1
Layton, A.C.2
Dionisi, H.M.3
Gregory, I.R.4
Garrett, V.M.5
Hawkins, S.A.6
-
13
-
-
79952573649
-
Molecular- and cultivation-based analyses of microbial communities in oil field water and in microcosms amended with nitrate to control H2S production
-
Kumaraswamy, R., S. Ebert, M. R. Gray, P. M. Fedorak, and J. M. Foght. 2011. Molecular- and cultivation-based analyses of microbial communities in oil field water and in microcosms amended with nitrate to control H2S production. Appl. Microbiol. Biotechnol. 89:2027-2038.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.89
, pp. 2027-2038
-
-
Kumaraswamy, R.1
Ebert, S.2
Gray, M.R.3
Fedorak, P.M.4
Foght, J.M.5
-
14
-
-
84879266838
-
Diversity of microbial communities in production and injection waters of algerian oilfields revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing
-
Lenchi, N., Ö. I˙nceoğlu, S. Kebbouche-Gana, M. L. Gana, M. Llirós, P. Servais, et al. 2013. Diversity of microbial communities in production and injection waters of algerian oilfields revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing. PLoS One 8:e66588.
-
(2013)
PLoS One
, vol.8
, pp. e66588
-
-
Lenchi, N.1
Inceoğlu, O.2
Kebbouche-Gana, S.3
Gana, M.L.4
Llirós, M.5
Servais, P.6
-
15
-
-
84871808228
-
Molecular detection, quantification and distribution of alkane-degrading bacteria in production water from low temperature oilfields
-
Li, H., X. L. Wang, B. Z. Mu, J. D. Gu, Y. D. Liu, K. F. Lin, et al. 2013. Molecular detection, quantification and distribution of alkane-degrading bacteria in production water from low temperature oilfields. Int. Biodeterior. Biodegradation 76:49-57.
-
(2013)
Int. Biodeterior. Biodegradation
, vol.76
, pp. 49-57
-
-
Li, H.1
Wang, X.L.2
Mu, B.Z.3
Gu, J.D.4
Liu, Y.D.5
Lin, K.F.6
-
16
-
-
84899814746
-
Microbial Abundance and community composition influence production performance in a low-temperature petroleum reservoir
-
Li, G. Q., P. K. Gao, Y. Q. Wu, H. M. Tian, X. C. Dai, Y. S. Wang, et al. 2014. Microbial Abundance and community composition influence production performance in a low-temperature petroleum reservoir. Environ. Sci. Technol. 48:5336-5344.
-
(2014)
Environ. Sci. Technol.
, vol.48
, pp. 5336-5344
-
-
Li, G.Q.1
Gao, P.K.2
Wu, Y.Q.3
Tian, H.M.4
Dai, X.C.5
Wang, Y.S.6
-
17
-
-
41349083576
-
Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea
-
Liu, Y. C., and W. B. Whitman. 2008. Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea. Ann. N. Y. Acad. Sci. 1125:171-189.
-
(2008)
Ann. N. Y. Acad. Sci.
, vol.1125
, pp. 171-189
-
-
Liu, Y.C.1
Whitman, W.B.2
-
18
-
-
80054913451
-
FLASH: fast length adjustment of short reads to improve genome assemblies
-
Magoc, T., and S. L. Salzberg. 2011. FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics 27:2957-2963.
-
(2011)
Bioinformatics
, vol.27
, pp. 2957-2963
-
-
Magoc, T.1
Salzberg, S.L.2
-
19
-
-
84897108731
-
Comparison of microbial communities involved in souring and corrosion in offshore and onshore oil production facilities in Nigeria
-
Okoro, C., S. Smith, L. Chiejina, R. Lumactud, D. An, H. S. Park, et al. 2014. Comparison of microbial communities involved in souring and corrosion in offshore and onshore oil production facilities in Nigeria. J. Ind. Microbiol. Biotechnol. 41:665-678.
-
(2014)
J. Ind. Microbiol. Biotechnol.
, vol.41
, pp. 665-678
-
-
Okoro, C.1
Smith, S.2
Chiejina, L.3
Lumactud, R.4
An, D.5
Park, H.S.6
-
20
-
-
77954860346
-
Biosurfactants, bioemulsifiers and exopolysaccharides from marine microorganisms
-
Satpute, S. K., I. M. Banat, P. K. Dhakephalkar, A. G. Banpurkar, and B. A. Chopade. 2010. Biosurfactants, bioemulsifiers and exopolysaccharides from marine microorganisms. Biotechnol. Adv. 28:436-450.
-
(2010)
Biotechnol. Adv.
, vol.28
, pp. 436-450
-
-
Satpute, S.K.1
Banat, I.M.2
Dhakephalkar, P.K.3
Banpurkar, A.G.4
Chopade, B.A.5
-
21
-
-
84925075975
-
Temperature impacts differentially on the methanogenic food web of cellulose-supplemented peatland soil
-
Schmidt, O., M. A. Horn, S. Kolb, and H. L. Drake. 2014. Temperature impacts differentially on the methanogenic food web of cellulose-supplemented peatland soil. Environ. Microbiol. DOI: 10.1111/1462-2920.12507.
-
(2014)
Environ. Microbiol.
-
-
Schmidt, O.1
Horn, M.A.2
Kolb, S.3
Drake, H.L.4
-
22
-
-
77952295773
-
A comparative study of most probable number (MPN)-PCR vs. real-time-PCR for the measurement of abundance and assessment of diversity of alkB homologous genes in soil
-
Schulz, S., A. Perez-De-Mora, M. Engel, J. C. Munch, and M. Schloter. 2010. A comparative study of most probable number (MPN)-PCR vs. real-time-PCR for the measurement of abundance and assessment of diversity of alkB homologous genes in soil. J. Microbiol. Methods 80:295-298.
-
(2010)
J. Microbiol. Methods
, vol.80
, pp. 295-298
-
-
Schulz, S.1
Perez-De-Mora, A.2
Engel, M.3
Munch, J.C.4
Schloter, M.5
-
23
-
-
80052629053
-
Biosurfactant-producing bacillus are present in produced brines from Oklahoma oil reservoirs with a wide range of salinities
-
Simpson, D. R., N. R. Natraj, M. J. McInerney, and K. E. Duncan. 2011. Biosurfactant-producing bacillus are present in produced brines from Oklahoma oil reservoirs with a wide range of salinities. Appl. Microbiol. Biotechnol. 91:1083-1093.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.91
, pp. 1083-1093
-
-
Simpson, D.R.1
Natraj, N.R.2
McInerney, M.J.3
Duncan, K.E.4
-
24
-
-
0033857287
-
Isolation and characterization of diverse halobenzoate-degrading denitrifying bacteria from soils and sediments
-
Song, B., N. J. Palleroni, and M. M. Häggblom. 2000. Isolation and characterization of diverse halobenzoate-degrading denitrifying bacteria from soils and sediments. Appl. Environ. Microbiol. 66:3446-3453.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 3446-3453
-
-
Song, B.1
Palleroni, N.J.2
Häggblom, M.M.3
-
25
-
-
55049121420
-
Phylogenetic comparison of the methanogenic communities from an acidic, oligotrophic fen and an anaerobic digester treating municipal wastewater sludge
-
Steinberg, L. M., and J. M. Regan. 2008. Phylogenetic comparison of the methanogenic communities from an acidic, oligotrophic fen and an anaerobic digester treating municipal wastewater sludge. Appl. Environ. Microbiol. 74:6663-6671.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 6663-6671
-
-
Steinberg, L.M.1
Regan, J.M.2
-
26
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
27
-
-
84863287529
-
Microbial communities in long-term, water-flooded petroleum reservoirs with different in situ temperatures in the Huabei Oilfield, China
-
Tang, Y. Q., Y. Li, J. Y. Zhao, C. Q. Chi, L. X. Huang, H. P. Dong, et al. 2012. Microbial communities in long-term, water-flooded petroleum reservoirs with different in situ temperatures in the Huabei Oilfield, China. PLoS One 7:e33535.
-
(2012)
PLoS One
, vol.7
, pp. e33535
-
-
Tang, Y.Q.1
Li, Y.2
Zhao, J.Y.3
Chi, C.Q.4
Huang, L.X.5
Dong, H.P.6
-
28
-
-
84926299633
-
Petroleum microbiology
-
Wackett, L. P. 2012. Petroleum microbiology. Microb. Biotechnol. 5:579-580.
-
(2012)
Microb. Biotechnol.
, vol.5
, pp. 579-580
-
-
Wackett, L.P.1
-
29
-
-
34548293679
-
Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang, Q., G. M. Garrity, J. M. Tiedje, and J. R. Cole. 2007. Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73:5261-5267.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
Cole, J.R.4
-
30
-
-
77953557020
-
Gene diversity of CYP153A and AlkB alkane hydroxylases in oil-degrading bacteria isolated from the Atlantic Ocean
-
Wang, L. P., W. P. Wang, Q. L. Lai, and Z. Z. Shao. 2010. Gene diversity of CYP153A and AlkB alkane hydroxylases in oil-degrading bacteria isolated from the Atlantic Ocean. Environ. Microbiol. 12:1230-1242.
-
(2010)
Environ. Microbiol.
, vol.12
, pp. 1230-1242
-
-
Wang, L.P.1
Wang, W.P.2
Lai, Q.L.3
Shao, Z.Z.4
-
31
-
-
79960837048
-
Degradation of petroleum hydrocarbons (C6-C40) and crude oil by a novel Dietzia strain
-
Wang, X. B., C. Q. Chi, Y. Nie, Y. Q. Tang, Y. Tan, G. Wu, et al. 2011. Degradation of petroleum hydrocarbons (C6-C40) and crude oil by a novel Dietzia strain. Bioresour. Technol. 102:7755-7761.
-
(2011)
Bioresour. Technol.
, vol.102
, pp. 7755-7761
-
-
Wang, X.B.1
Chi, C.Q.2
Nie, Y.3
Tang, Y.Q.4
Tan, Y.5
Wu, G.6
-
32
-
-
84869801713
-
Molecular analysis of the microbial community structures in water-flooding petroleum reservoirs with different temperatures
-
Wang, L. Y., R. Y. Duan, J. F. Liu, S. Z. Yang, J. D. Gu, and B. Z. Mu. 2012. Molecular analysis of the microbial community structures in water-flooding petroleum reservoirs with different temperatures. Biogeosciences 9:5177-5203.
-
(2012)
Biogeosciences
, vol.9
, pp. 5177-5203
-
-
Wang, L.Y.1
Duan, R.Y.2
Liu, J.F.3
Yang, S.Z.4
Gu, J.D.5
Mu, B.Z.6
-
33
-
-
82855172065
-
Comparative study of biosurfactant produced by microorganisms isolated from formation water of petroleum reservoir
-
Xia, W. J., H. P. Dong, L. Yu, and D. F. Yu. 2011. Comparative study of biosurfactant produced by microorganisms isolated from formation water of petroleum reservoir. Colloid Surf. A 392:124-130.
-
(2011)
Colloid Surf. A
, vol.392
, pp. 124-130
-
-
Xia, W.J.1
Dong, H.P.2
Yu, L.3
Yu, D.F.4
-
34
-
-
59449110673
-
Microbial processes in oil fields: culprits, problems, and opportunities
-
Youssef, N., M. S. Elshahed, and M. J. McInerney. 2009. Microbial processes in oil fields: culprits, problems, and opportunities. Adv. Appl. Microbiol. 66:141-251.
-
(2009)
Adv. Appl. Microbiol.
, vol.66
, pp. 141-251
-
-
Youssef, N.1
Elshahed, M.S.2
McInerney, M.J.3
-
35
-
-
84865791972
-
Characterization of microbial diversity and community in water flooding oil reservoirs in China
-
Zhao, L. X., T. Ma, M. L. Gao, P. K. Gao, M. N. Cao, X. D. Zhu, et al. 2012. Characterization of microbial diversity and community in water flooding oil reservoirs in China. World J. Microb. Biotechnol. 28:3039-3052.
-
(2012)
World J. Microb. Biotechnol.
, vol.28
, pp. 3039-3052
-
-
Zhao, L.X.1
Ma, T.2
Gao, M.L.3
Gao, P.K.4
Cao, M.N.5
Zhu, X.D.6
|